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| GeneID |
9129
|
| Symbol |
PRPF3
|
| Synonyms |
HPRP3|HPRP3P|PRP3|Prp3p|RP18
|
| Description |
PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae) |
| See related |
HGNC:17348|MIM:607301|Ensembl:ENSG00000117360|HPRD:07389| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
1q21.1 |
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| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_I | genome scan meta-analysis | Psr: 0.0235 | | | GSMA_IIA | genome scan meta-analysis (All samples) | Psr: 0.00814 | |
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| General Gene Expression (microarray) ? |
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| Gene Expression in Brain Regions (new) |
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| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| VWA5B2 | 0.78 | 0.75 | | |
| ARHGEF4 | 0.77 | 0.74 | | |
| PDE4C | 0.77 | 0.75 | | |
| SHANK3 | 0.75 | 0.80 | | |
| DGKZ | 0.75 | 0.72 | | |
| KCNIP3 | 0.75 | 0.73 | | |
| SAPS1 | 0.75 | 0.72 | | |
| PACSIN1 | 0.74 | 0.74 | | |
| SYT15 | 0.74 | 0.77 | | |
| FMNL1 | 0.74 | 0.68 | | |
Top 10 negatively co-expressed genes | | RPS6 | -0.52 | -0.63 | | |
| RPL24 | -0.51 | -0.64 | | |
| C9orf46 | -0.51 | -0.58 | | |
| RPS13P2 | -0.50 | -0.59 | | |
| RPS18 | -0.50 | -0.60 | | |
| RPS3AP47 | -0.50 | -0.56 | | |
| RPL27 | -0.50 | -0.61 | | |
| RPL5 | -0.50 | -0.54 | | |
| AC079354.7 | -0.50 | -0.52 | | |
| RPS23 | -0.50 | -0.59 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005515 | protein binding | IPI | | 16189514 |17353931 |
| GO:0031202 | RNA splicing factor activity, transesterification mechanism | TAS | | 9328476 |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000398 | nuclear mRNA splicing, via spliceosome | NAS | | 9328476 |
| GO:0008380 | RNA splicing | TAS | | 9328476 |
| GO:0007601 | visual perception | IEA | | - |
| GO:0050896 | response to stimulus | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005634 | nucleus | TAS | | 9328476 |
| GO:0005681 | spliceosome | NAS | | 9328476 |
| GO:0016607 | nuclear speck | IEA | | - |
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