Gene Page: TOR1B

Summary ?
GeneID27348
SymbolTOR1B
SynonymsDQ1
Descriptiontorsin family 1 member B
ReferenceMIM:608050|HGNC:HGNC:11995|Ensembl:ENSG00000136816|HPRD:16270|Vega:OTTHUMG00000020795
Gene typeprotein-coding
Map location9q34
Pascal p-value0.015
Fetal beta0.099
eGeneCaudate basal ganglia
Cerebellar Hemisphere
Putamen basal ganglia
Meta

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:GWASdbGenome-wide Association StudiesGWASdb records for schizophrenia
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs132908059132570924TOR1BENSG00000136816.111.207E-60.015492gtex_brain_putamen_basal
rs126349132573536TOR1BENSG00000136816.111.148E-60.018104gtex_brain_putamen_basal
rs106422559132582425TOR1BENSG00000136816.115.854E-70.0116993gtex_brain_putamen_basal
rs344292269132583929TOR1BENSG00000136816.111.003E-60.0118497gtex_brain_putamen_basal
rs22967939132585058TOR1BENSG00000136816.116.217E-70.0119626gtex_brain_putamen_basal
rs81139132589606TOR1BENSG00000136816.111.906E-60.0124174gtex_brain_putamen_basal
rs87199132589633TOR1BENSG00000136816.111.906E-60.0124201gtex_brain_putamen_basal
rs18069889132590352TOR1BENSG00000136816.111.074E-60.0124920gtex_brain_putamen_basal
rs18069899132590353TOR1BENSG00000136816.111.089E-60.0124921gtex_brain_putamen_basal
rs7320749132590431TOR1BENSG00000136816.111.906E-60.0124999gtex_brain_putamen_basal
rs351689569132590837TOR1BENSG00000136816.118.572E-70.0125405gtex_brain_putamen_basal
rs454412059132590843TOR1BENSG00000136816.118.572E-70.0125411gtex_brain_putamen_basal
rs455620329132590860TOR1BENSG00000136816.113.536E-70.0125428gtex_brain_putamen_basal
rs455812339132590912TOR1BENSG00000136816.111.906E-60.0125480gtex_brain_putamen_basal
rs350753139132590997TOR1BENSG00000136816.111.906E-60.0125565gtex_brain_putamen_basal
rs559629059132591272TOR1BENSG00000136816.119.591E-70.0125840gtex_brain_putamen_basal
rs70329459132591372TOR1BENSG00000136816.111.906E-60.0125940gtex_brain_putamen_basal
rs38185539132591509TOR1BENSG00000136816.111.906E-60.0126077gtex_brain_putamen_basal
rs412787329132591992TOR1BENSG00000136816.111.906E-60.0126560gtex_brain_putamen_basal
rs132901409132592211TOR1BENSG00000136816.111.906E-60.0126779gtex_brain_putamen_basal
rs349089989132592636TOR1BENSG00000136816.111.906E-60.0127204gtex_brain_putamen_basal
rs345604969132592663TOR1BENSG00000136816.111.906E-60.0127231gtex_brain_putamen_basal
rs132865529132592775TOR1BENSG00000136816.111.906E-60.0127343gtex_brain_putamen_basal
rs20628019132593982TOR1BENSG00000136816.111.906E-60.0128550gtex_brain_putamen_basal
rs20628009132594362TOR1BENSG00000136816.111.891E-60.0128930gtex_brain_putamen_basal
rs20627999132594378TOR1BENSG00000136816.111.906E-60.0128946gtex_brain_putamen_basal
rs589799479132594658TOR1BENSG00000136816.111.906E-60.0129226gtex_brain_putamen_basal
rs20627989132594718TOR1BENSG00000136816.118.886E-70.0129286gtex_brain_putamen_basal
rs348625539132594938TOR1BENSG00000136816.111.983E-60.0129506gtex_brain_putamen_basal
rs349040949132594984TOR1BENSG00000136816.111.906E-60.0129552gtex_brain_putamen_basal
rs727552389132595664TOR1BENSG00000136816.111.906E-60.0130232gtex_brain_putamen_basal
rs455075009132595685TOR1BENSG00000136816.111.906E-60.0130253gtex_brain_putamen_basal
rs22745089132596071TOR1BENSG00000136816.111.906E-60.0130639gtex_brain_putamen_basal
rs670610749132596159TOR1BENSG00000136816.111.906E-60.0130727gtex_brain_putamen_basal
rs38145479132597021TOR1BENSG00000136816.111.906E-60.0131589gtex_brain_putamen_basal
rs117906139132597621TOR1BENSG00000136816.111.894E-60.0132189gtex_brain_putamen_basal
rs132947109132597721TOR1BENSG00000136816.111.512E-60.0132289gtex_brain_putamen_basal
rs70379829132602208TOR1BENSG00000136816.112.173E-60.0136776gtex_brain_putamen_basal
rs123423509132603071TOR1BENSG00000136816.111.225E-60.0137639gtex_brain_putamen_basal
rs132973599132603396TOR1BENSG00000136816.111.124E-60.0137964gtex_brain_putamen_basal

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
FULCHER INFLAMMATORY RESPONSE LECTIN VS LPS DN 463290All SZGR 2.0 genes in this pathway
LINDGREN BLADDER CANCER WITH LOH IN CHR9Q 11671All SZGR 2.0 genes in this pathway
SCHLOSSER SERUM RESPONSE DN 712443All SZGR 2.0 genes in this pathway
PETRETTO HEART MASS QTL CIS UP 2815All SZGR 2.0 genes in this pathway
GEORGES TARGETS OF MIR192 AND MIR215 893528All SZGR 2.0 genes in this pathway
BROWNE HCMV INFECTION 48HR UP 180125All SZGR 2.0 genes in this pathway
BROWNE HCMV INFECTION 18HR UP 178111All SZGR 2.0 genes in this pathway
DOUGLAS BMI1 TARGETS DN 314188All SZGR 2.0 genes in this pathway
CREIGHTON ENDOCRINE THERAPY RESISTANCE 3 720440All SZGR 2.0 genes in this pathway
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UP 863514All SZGR 2.0 genes in this pathway
HAN SATB1 TARGETS DN 442275All SZGR 2.0 genes in this pathway
MILI PSEUDOPODIA CHEMOTAXIS DN 457302All SZGR 2.0 genes in this pathway
MILI PSEUDOPODIA HAPTOTAXIS DN 668419All SZGR 2.0 genes in this pathway
YAGI AML WITH INV 16 TRANSLOCATION 422277All SZGR 2.0 genes in this pathway
PILON KLF1 TARGETS DN 19721213All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 2ND EGF PULSE ONLY 1725838All SZGR 2.0 genes in this pathway