Search results: The pahtway p3559 has 863 genes in the original annotation. Currently, there are 514 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
252839TMEM9TMEM9Atransmembrane protein 9-CV:PGCnp
DMG:Jaffe_2016
8453CUL2-cullin 210p11.21CV:PGCnp
DMG:Wockner_2014
Network
94134ARHGAP12-Rho GTPase activating protein 1210p11.22CV:PGCnp
DMG:Wockner_2014
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
23412COMMD3BUP | C10orf8COMM domain containing 310p12.2CV:PGCnp
DMG:Nishioka_2013
11164NUDT5YSA1 | YSA1H | YSAH1 | hYSAH1nudix hydrolase 510p14CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
23560GTPBP4CRFG | NGB | NOG1GTP binding protein 410p15-p14CV:PGCnp
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
5464PPA1HEL-S-66p | IOPPP | PP | PP1 | SID6-8061pyrophosphatase (inorganic) 110q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
23234DNAJC9HDJC9 | JDD1 | SB73DnaJ heat shock protein family (Hsp40) member C910q22.2DMG:Wockner_2014
PMID:cooccur
81619TSPAN14DC-TM4F2 | TM4SF14tetraspanin 1410q23.1CV:PGCnp
DEG:Zhao_2015
3433IFIT2G10P2 | GARG-39 | IFI-54 | IFI-54K | IFI54 | IFIT-2 | ISG-54 K | ISG-54K | ISG54 | P54 | cig42interferon induced protein with tetratricopeptide repeats 210q23.31CV:PGCnp
PMID:cooccur
84896ATAD1AFDC1 | FNP001 | THORASEATPase family, AAA domain containing 110q23.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
57559STAMBPL1ALMalpha | AMSH-FP | AMSH-LP | bA399O19.2STAM binding protein like 110q23.31DMG:Jaffe_2016
23401FRAT2-frequently rearranged in advanced T-cell lymphomas 210q24.1CV:PGCnp
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
79004CUEDC2C10orf66 | bA18I14.5CUE domain containing 210q24.32CV:PGCnp
118980SFXN2-sideroflexin 210q24.32CV:PGCnp
LK:YES
25911DPCD-deleted in primary ciliary dyskinesia homolog (mouse)10q24.32CV:PGCnp
79803HPS6BLOC2S3HPS6, biogenesis of lysosomal organelles complex 2 subunit 310q24.32CV:PGCnpAscano FMRP targets
9644SH3PXD2AFISH | SH3MD1 | TKS5SH3 and PX domains 2A10q24.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Ascano FMRP targets
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
9446GSTO1GSTO 1-1 | GSTTLp28 | HEL-S-21 | P28 | SPG-Rglutathione S-transferase omega 110q25.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
966CD5916.3A5 | 1F5 | EJ16 | EJ30 | EL32 | G344 | HRF-20 | HRF20 | MAC-IP | MACIF | MEM43 | MIC11 | MIN1 | MIN2 | MIN3 | MIRL | MSK21 | p18-20CD59 molecule11p13CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
10480EIF3MB5 | GA17 | PCID1 | TANGO7 | hfl-B5eukaryotic translation initiation factor 3 subunit M11p13CV:PGCnp
DMG:Jaffe_2016
4005LMO2RBTN2 | RBTNL1 | RHOM2 | TTG2LIM domain only 211p13CV:PGCnp
DMG:Jaffe_2016
6207RPS13S13ribosomal protein S1311p15CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
9646CTR9SH2BP1 | TSBP | p150 | p150TSPCTR9 homolog, Paf1/RNA polymerase II complex component11p15.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
23258DENND5ARAB6IP1DENN domain containing 5A11p15.4CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10978CLP1HEAB | hClp1cleavage and polyadenylation factor I subunit 111q12CV:PGCnp
DMG:Jaffe_2016
83759RBM4BRBM30 | RBM4L | ZCCHC15 | ZCCHC21B | ZCRB3BRNA binding motif protein 4B11q13CV:PGCnp
5499PPP1CAPP-1A | PP1A | PP1alpha | PPP1Aprotein phosphatase 1 catalytic subunit alpha11q13DMG:Montano_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Chromatin Remodeling Genes
8772FADDGIG3 | MORT1Fas associated via death domain11q13.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
55004LAMTOR1C11orf59 | PDRO | Ragulator1 | p18 | p27RF-Rholate endosomal/lysosomal adaptor, MAPK and MTOR activator 111q13.4CV:PGCnp
8322FZD4CD344 | EVR1 | FEVR | FZD4S | Fz-4 | Fz4 | FzE4 | GPCR | hFz4frizzled class receptor 411q14.2CV:PGCnp
DMG:Wockner_2014
10525HYOU1GRP-170 | Grp170 | HSP12A | ORP-150 | ORP150hypoxia up-regulated 111q23.1-q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
25996REXO2CGI-114 | REX2 | RFN | SFNRNA exonuclease 211q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7070THY1CD90 | CDw90Thy-1 cell surface antigen11q23.3DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
51399TRAPPC4CGI-104 | HSPC172 | PTD009 | SBDN | SYNBINDIN | TRS23trafficking protein particle complex 411q23.3CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_I
6230RPS25S25ribosomal protein S2511q23.3CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
3703STT3AITM1 | STT3-A | TMCSTT3A, catalytic subunit of the oligosaccharyltransferase complex11q23.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
3709ITPR2ANHD | CFAP48 | INSP3R2 | IP3R2inositol 1,4,5-trisphosphate receptor type 212p11CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
Ascano FMRP targets
51067YARS2CGI-04 | MLASA2 | MT-TYRRS | TYRRStyrosyl-tRNA synthetase 212p11.21CV:PGCnp
DMG:Wockner_2014
160518DENND5B-DENN domain containing 5B12p11.21CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
51026GOLT1BCGI-141 | GCT2 | GOT1 | GOT1B | YMR292Wgolgi transport 1B12p12.1CV:PGCnp
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
928CD9BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29CD9 molecule12p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
113246C12orf57C10 | GRCC10chromosome 12 open reading frame 5712p13.31CV:PGCnp
DMG:vanEijk_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
196527ANO6BDPLT7 | SCTS | TMEM16Fanoctamin 612q12CV:PGCnp
144402CPNE8-copine 812q12CV:PGCnp
DMG:Nishioka_2013
Expression
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
84790TUBA1CTUBA6 | bcm948tubulin alpha 1c12q13.12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
85406DNAJC14DNAJ | DRIP78 | HDJ3 | LIP6DnaJ heat shock protein family (Hsp40) member C1412q13.2CV:PGCnp
DMG:Jaffe_2016
Network
4141MARSCMT2U | ILFS2 | ILLD | METRS | MRS | MTRNS | SPG70methionyl-tRNA synthetase12q13.3CV:PGCnp
Network
PMID:cooccur
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
56901NDUFA4L2NUOMSNADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 212q13.3CV:PGCnp
DMG:Wockner_2014
11260XPOTXPO3exportin for tRNA12q14.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
117177RAB3IPRABIN3 | RABIN8RAB3A interacting protein12q15CV:PGCnp
7334UBE2NHEL-S-71 | UBC13 | UBCHBEN; UBC13 | UbcH-ben | UbcH13ubiquitin conjugating enzyme E2 N12q22CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
1407CRY1PHLL1cryptochrome circadian clock 112q23-q24.1CV:PGCnp
PMID:cooccur
79023NUP37p37nucleoporin 37kDa12q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
400ARL1ARFL1ADP ribosylation factor like GTPase 112q23.2CV:PGCnp
DMG:Jaffe_2016
Network
10970CKAP4CLIMP-63 | ERGIC-63 | p63cytoskeleton-associated protein 412q23.3CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
7296TXNRD1GRIM-12 | TR | TR1 | TRXR1 | TXNRthioredoxin reductase 112q23.3CV:PGCnp
121053C12orf45-chromosome 12 open reading frame 4512q23.3CV:PGCnp
DMG:Jaffe_2016
51699VPS29DC15 | DC7 | PEP11VPS29, retromer complex component12q24CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
79600TCTN1JBTS13 | TECT1tectonic family member 112q24.11CV:PGCnp
488ATP2A2ATP2B | DAR | DD | SERCA2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 212q24.11CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
84749USP30-ubiquitin specific peptidase 3012q24.11CV:PGCnp
84260TCHPTpMstrichoplein keratin filament binding12q24.11CV:PGCnp
DMG:Jaffe_2016
6175RPLP0L10E | LP0 | P0 | PRLP0 | RPP0ribosomal protein lateral stalk subunit P012q24.2DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
144348ZNF664ZFOC1 | ZNF176zinc finger protein 66412q24.31CV:PGCnp
143PARP4ADPRTL1 | ARTD4 | PARP-4 | PARPL | PH5P | VAULT3 | VPARP | VWA5C | p193poly(ADP-ribose) polymerase family member 413q11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
10808HSPH1HSP105 | HSP105A | HSP105B | NY-CO-25heat shock protein family H (Hsp110) member 113q12.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
51569UFM1BM-002 | C13orf20ubiquitin-fold modifier 113q13.3CV:PGCnp
DMG:Nishioka_2013
1948EFNB2EPLG5 | HTKL | Htk-L | LERK5ephrin-B213q33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
54841BIVM-basic, immunoglobulin-like variable motif containing13q33.1CV:PGCnp
DMG:Nishioka_2013
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
5911RAP2AK-REV | KREV | RAP2 | RbBP-30RAP2A, member of RAS oncogene family13q34CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
328APEX1APE | APE1 | APEN | APEX | APX | HAP1 | REF1apurinic/apyrimidinic endodeoxyribonuclease 114q11.2DMG:Nishioka_2013
GSMA_I
Network
54930HAUS4C14orf94HAUS augmin like complex subunit 414q11.2CV:PGCnp
GSMA_I
60686C14orf93-chromosome 14 open reading frame 9314q11.2CV:PGCnp
GSMA_I
5018OXA1LOXA1oxidase (cytochrome c) assembly 1-like14q11.2CV:PGCnp
DNM:Guipponi_2014
GSMA_I
5693PSMB5LMPX | MB1 | Xproteasome subunit beta 514q11.2CV:PGCnp
GSMA_I
29091STXBP6HSPC156 | amisynsyntaxin binding protein 614q12CV:GWASdb
CV:PGCnp
Expression
GSMA_I
EXOCYTOSIS
26277TINF2DKCA3 | TIN2TERF1 (TRF1)-interacting nuclear factor 214q12CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
60485SAV1SAV | WW45 | WWP4salvador family WW domain containing protein 114q13-q23CV:PGCnp
CV:PheWAS
171546SPTSSAC14orf147 | SSSPTAserine palmitoyltransferase small subunit A14q13.1CV:GWASdb
CV:PGCnp
9692KIAA0391MRPP3 | PRORPKIAA039114q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6166RPL36ALRPL36Aribosomal protein L36a like14q21CV:PGCnp
27109ATP5SATPW | FB | HSU79253ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B)14q21.3CV:PGCnp
DMG:Jaffe_2016
2764GMFBGMFglia maturation factor beta14q22.2CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
93487MAPK1IP1LC14orf32 | MISS | c14_5346mitogen-activated protein kinase 1 interacting protein 1-like14q22.3CV:PGCnp
10972TMED10P24(DELTA) | S31I125 | S31III125 | TMP21 | Tmp-21-I | p23 | p24d1transmembrane p24 trafficking protein 1014q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6218RPS17DBA4 | RPS17L | RPS17L1 | RPS17L2 | S17ribosomal protein S1715qPMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
51621KLF13BTEB3 | FKLF2 | NSLP1 | RFLAT-1 | RFLAT1Kruppel-like factor 1315q12CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
55505NOP10DKCB1 | NOLA3 | NOP10PNOP10 ribonucleoprotein15q14-q15CV:PGCnp
4236MFAP1-microfibrillar associated protein 115q15.3CV:PGCnpAscano FMRP targets
55930MYO5C-myosin VC15q21CV:PGCnp
DMG:Wockner_2014
8669EIF3JEIF3S1 | eIF3-alpha | eIF3-p35eukaryotic translation initiation factor 3 subunit J15q21.1CV:PGCnp
DMG:Jaffe_2016
10776ARPP19ARPP-16 | ARPP-19 | ARPP16 | ENSALcAMP regulated phosphoprotein 19kDa15q21.2CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
Expression
GO_Annotation
9488PIGBGPI-MT-III | PIG-Bphosphatidylinositol glycan anchor biosynthesis class B15q21.3CV:PGCnp
10081PDCD7ES18 | HES18programmed cell death 715q22.31CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Network
9325TRIP4ASC-1 | ASC1 | HsT17391 | ZC2HC5thyroid hormone receptor interactor 415q22.31CV:PGCnp
DMG:Nishioka_2013
80349WDR61REC14 | SKI8WD repeat domain 6115q25.1CV:PGCnp
DMG:Nishioka_2013
Network
374659HDDC3(ppGpp)ase | MESH1HD domain containing 315q26.1CV:PGCnp
9055PRC1ASE1protein regulator of cytokinesis 115q26.1CV:PGCnp
6210RPS15AS15aribosomal protein S15a16pCV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
23247KIAA0556JBTS26KIAA055616p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
1201CLN3BTS | JNCLceroid-lipofuscinosis, neuronal 316p12.1DMG:Jaffe_2016
DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
PMID:cooccur
124454EARS2COXPD12 | MSE1 | gluRSglutamyl-tRNA synthetase 2, mitochondrial16p12.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIE
255027MPV17LM-LPH | MLPH1 | MLPH2 | MPV17L1MPV17 mitochondrial membrane protein-like16p13.11CNV:YES
CV:PGCnp
GSMA_IIE
116028RMI2BLAP18 | C16orf75RecQ mediated genome instability 216p13.13CV:PGCnp
CV:PheWAS
5493PPL-periplakin16p13.3CV:PGCnp
PMID:cooccur
79006METRNC16orf23 | c380A1.2meteorin, glial cell differentiation regulator16p13.3CV:PGCnp
Expression
GO_Annotation
527ATP6V0CATP6C | ATP6L | ATPL | VATL | VPPC | Vma3ATPase H+ transporting V0 subunit c16p13.3CV:PGCnp
DMG:Wockner_2014
ION BALANCE
388272C16orf87-chromosome 16 open reading frame 8716q11.2CV:PGCnp
DMG:Jaffe_2016
55737VPS35MEM3 | PARK17VPS35, retromer complex component16q12CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
79191IRX3IRX-1 | IRXB1iroquois homeobox 316q12.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
10300KATNB1KAT | LIS6katanin p80 (WD repeat containing) subunit B 116q21CV:PGCnp
GO_Annotation
PMID:cooccur
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
1003CDH57B4 | CD144cadherin 516q22.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
7014TERF2TRBF2 | TRF2telomeric repeat binding factor 216q22.1CV:PGCnp
23536ADAT1HADAT1adenosine deaminase, tRNA specific 116q23.1CV:PGCnp
51659GINS2HSPC037 | PSF2 | Pfs2GINS complex subunit 2 (Psf2 homolog)16q24.1CV:PGCnp
6154RPL26DBA11 | L26ribosomal protein L2617p13CV:PGCnp
DMG:Nishioka_2013
6117RPA1HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70replication protein A117p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
708C1QBPGC1QBP | HABP1 | SF2p32 | gC1Q-R | gC1qR | p32complement component 1, q subcomponent binding protein17p13.3CV:PGCnp
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
5216PFN1ALS18profilin 117p13.3CV:PGCnp
DMG:vanEijk_2014
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
6388SDF2-stromal cell derived factor 217q11.2DMG:Jaffe_2016
147007TMEM199C17orf32 | CDG2P | VMA12 | VPH2transmembrane protein 19917q11.2CV:GWASdb
6352CCL5D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCPC-C motif chemokine ligand 517q12DMG:vanEijk_2014
PMID:cooccur
10197PSME3HEL-S-283 | Ki | PA28-gamma | PA28G | PA28gamma | REG-GAMMAproteasome activator subunit 317q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
146923RUNDC1-RUN domain containing 117q21.31CV:PGCnpAscano FMRP targets
6668SP2-Sp2 transcription factor17q21.32CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
2896GRNCLN11 | GEP | GP88 | PCDGF | PEPI | PGRNgranulin17q21.32CV:PGCnp
PMID:cooccur
51649MRPS23CGI-138 | HSPC329 | MRP-S23mitochondrial ribosomal protein S2317q22CV:PGCnp
DMG:Jaffe_2016
10040TOM1L1OK/KNS-CL.3 | SRCASMtarget of myb1 like 1 membrane trafficking protein17q23.2CV:PGCnp
5635PRPSAP1PAP39phosphoribosyl pyrophosphate synthetase-associated protein 117q24-q25CV:PGCnp
DMG:Jaffe_2016
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
51321AMZ2-archaelysin family metallopeptidase 217q24.2CV:PGCnp
DMG:Jaffe_2016
55062WIPI1ATG18 | ATG18A | WIPI49WD repeat domain, phosphoinositide interacting 117q24.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
23580CDC42EP4BORG4 | CEP4 | KAIA1777CDC42 effector protein 417q25.1CV:PGCnp
PMID:cooccur
57409MIF4GDAD023 | MIFD | SLIP1MIF4G domain containing17q25.1DMG:Jaffe_2016
3396ICT1DS-1 | DS1 | MRP-L58immature colon carcinoma transcript 117q25.1CV:PGCnp
9775EIF4A3DDX48 | MUK34 | NMP265 | NUK34 | RCPS | eIF4AIIIeukaryotic translation initiation factor 4A317q25.3CV:PGCnp
PMID:cooccur
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
125058TBC1D16-TBC1 domain family member 1617q25.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Ascano FMRP targets
57132CHMP1BC10orf2 | C18-ORF2 | C18orf2 | CHMP1.5 | Vps46-2 | Vps46B | hVps46-2charged multivesicular body protein 1B18p11.21CV:PGCnp
4864NPC1NPCNiemann-Pick disease, type C118q11.2PMID:cooccur
23327NEDD4LNEDD4-2 | NEDD4.2 | RSP5 | hNEDD4-2neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase18q21.31CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
79939SLC35E1-solute carrier family 35 member E119p13.11DMG:Nishioka_2013
25804LSM4GRP | YER112WLSM4 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.11CV:GWASdb
CV:PGCnp
Network
8529CYP4F2CPF2cytochrome P450 family 4 subfamily F member 219p13.12CV:PGCnp
4125MAN2B1LAMAN | MANBmannosidase alpha class 2B member 119p13.2CV:PGCnp
DMG:Montano_2016
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
83483PLVAPFELS | PV-1 | PV1 | gp68plasmalemma vesicle associated protein19p13.2CV:PGCnp
DMG:Wockner_2014
5605MAP2K2CFC4 | MAPKK2 | MEK2 | MKK2 | PRKMK2mitogen-activated protein kinase kinase 219p13.3DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
DOPAMINE
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
587BCAT2BCAM | BCATM | BCT2 | PP18branched chain amino acid transaminase 219q13CV:PGCnp
GO_Annotation
56915EXOSC5RRP41B | RRP46 | Rrp46p | hRrp46p | p12Bexosome component 519q13.1CV:PGCnp
9141PDCD5TFAR19programmed cell death 519q13.11CV:PGCnp
DMG:Nishioka_2013
8463TEAD2ETF | TEAD-2 | TEF-4 | TEF4TEA domain transcription factor 219q13.3DMG:Wockner_2014
8605PLA2G4CCPLA2-gammaphospholipase A2 group IVC19q13.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
6193RPS5S5ribosomal protein S519q13.4CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
65982ZSCAN18ZNF447zinc finger and SCAN domain containing 1819q13.43CV:PGCnp
DMG:Jaffe_2016
4893NRASALPS4 | CMNS | N-ras | NCMS | NRAS1 | NS6neuroblastoma RAS viral (v-ras) oncogene homolog1p13.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
1901S1PR1CD363 | CHEDG1 | D1S3362 | ECGF1 | EDG-1 | EDG1 | S1P1sphingosine-1-phosphate receptor 11p21CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
51611DPH5AD-018 | CGI-30 | HSPC143 | NPD015diphthamide biosynthesis 51p21.2CV:PGCnp
DMG:Nishioka_2013
199857ALG14CMS15ALG14, UDP-N-acetylglucosaminyltransferase subunit1p21.3CV:PGCnp
55144LRRC8DLRRC5leucine-rich repeat containing 8 family member D1p22.2CV:PGCnp
115361GBP4Mpa2guanylate binding protein 41p22.2DEG:Sanders_2013
83941TM2D1BBPTM2 domain containing 11p31.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
55277FGGY-FGGY carbohydrate kinase domain containing1p32.1CV:GWAScat
CV:PGCnp
4116MAGOHMAGOH1 | MAGOHAmago homolog, exon junction complex core component1p32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
4520MTF1MTF-1 | ZRFmetal-regulatory transcription factor 11p33CV:PGCnp
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
5690PSMB2HC7-Iproteasome subunit beta 21p34.2CV:PGCnp
PMID:cooccur
84967LSM10MST074 | MSTP074LSM10, U7 small nuclear RNA associated1p34.3CV:PGCnp
DMG:Wockner_2014
Network
57648KIAA1522-KIAA15221p35.1CV:PGCnp
51538ZCCHC17HSPC251 | PS1D | pNO40zinc finger CCHC-type containing 171p35.2CV:PGCnp
DMG:Wockner_2014
65979PHACTR4PPP1R124phosphatase and actin regulator 41p35.3CV:PGCnp
DMG:Wockner_2014
6883TAF12TAF2J | TAFII20TATA-box binding protein associated factor 121p35.3CV:PGCnp
10236HNRNPRHNRPR | hnRNP-Rheterogeneous nuclear ribonucleoprotein R1p36.12CV:PGCnp
DMG:Jaffe_2016
10277UBE4BE4 | HDNB1 | UBOX3 | UFD2 | UFD2Aubiquitination factor E4B1p36.3CV:PGCnp
DMG:Jaffe_2016
54460MRPS21MDS016 | MRP-S21 | RPMS21mitochondrial ribosomal protein S211q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
27173SLC39A1ZIP1 | ZIRTLsolute carrier family 39 member 11q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
2629GBAGBA1 | GCB | GLUCglucosidase, beta, acid1q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
6281S100A1042C | ANX2L | ANX2LG | CAL1L | CLP11 | Ca[1] | GP11 | P11 | p10S100 calcium binding protein A101q21CV:PGCnp
DEG:Sanders_2013
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
5692PSMB4HN3 | HsN3 | PROS-26 | PROS26proteasome subunit beta 41q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
8407TAGLN2HA1756transgelin 21q21-q25CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
Network
128077LIX1L-limb and CNS expressed 1 like1q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
653505PPIAL4ACOAS-2 | COAS2 | PPIAL4 | PPIAL4Bpeptidylprolyl isomerase A like 4A1q21.1CNV:YES
8682PEA15HMAT1 | HUMMAT1H | MAT1 | MAT1H | PEA-15 | PEDphosphoprotein enriched in astrocytes 151q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
11311VPS45H1 | H1VPS45 | SCN5 | VPS45A | VPS45B | VPS54A | VSP45 | VSP45Avacuolar protein sorting 45 homolog (S. cerevisiae)1q21.2CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
8337HIST2H2AA3H2A | H2A.2 | H2A/O | H2A/q | H2AFO | H2a-615 | HIST2H2AAhistone cluster 2, H2aa31q21.2DEG:Sanders_2013
GSMA_I
GSMA_IIA
8349HIST2H2BEGL105 | H2B | H2B.1 | H2BFQ | H2BGL105 | H2BQhistone cluster 2, H2be1q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
1163CKS1BCKS1 | PNAS-16 | PNAS-18 | ckshs1CDC28 protein kinase regulatory subunit 1B1q21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
10262SF3B4AFD1 | Hsh49 | SAP49 | SF3b49splicing factor 3b subunit 41q21.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
55204GOLPH3LGPP34Rgolgi phosphoprotein 3 like1q21.3CV:PGCnp
GSMA_I
GSMA_IIA
81609SNX27MRT1 | MY014sorting nexin family member 271q21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
55585UBE2Q1GTAP | NICE-5 | PRO3094 | UBE2Qubiquitin conjugating enzyme E2 Q11q21.3CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
4000LMNACDCD1 | CDDC | CMD1A | CMT2B1 | EMD2 | FPL | FPLD | FPLD2 | HGPS | IDC | LDP1 | LFP | LGMD1B | LMN1 | LMNC | LMNL1 | PRO1lamin A/C1q22CV:PGCnp
Expression
GSMA_I
GSMA_IIA
Network
PMID:cooccur
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
4259MGST3GST-IIImicrosomal glutathione S-transferase 31q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
2153F5FVL | PCCF | RPRGL1 | THPH2coagulation factor V1q23CV:PGCnp
PMID:cooccur
8490RGS5MST092 | MST106 | MST129 | MSTP032 | MSTP092 | MSTP106 | MSTP129regulator of G-protein signaling 51q23.1CV:PGCnp
GSMA_IIA
Network
PMID:cooccur
79590MRPL24L24mt | MRP-L18 | MRP-L24mitochondrial ribosomal protein L241q23.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
261726TIPRLTIP | TIP41TOR signaling pathway regulator1q23.2CV:PGCnp
DMG:Jaffe_2016
5824PEX19D1S2223E | HK33 | PBD12A | PMP1 | PMPI | PXF | PXMP1peroxisomal biogenesis factor 191q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
126823KLHDC9KARCA1kelch domain containing 91q23.3DMG:Jaffe_2016
GSMA_IIA
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
481ATP1B1ATP1BATPase Na+/K+ transporting subunit beta 11q24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
57645POGKBASS2 | KRBOX2 | LST003pogo transposable element with KRAB domain1q24.1CV:PGCnp
DMG:vanEijk_2014
26092TOR1AIP1LAP1 | LAP1Btorsin 1A interacting protein 11q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
9917FAM20Bgxk1family with sequence similarity 20 member B1q25CV:PGCnp
DMG:Jaffe_2016
27252KLHL20KHLHX | KLEIP | KLHLXkelch like family member 201q25.1CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9213XPR1IBGC6 | SYG1 | X3xenotropic and polytropic retrovirus receptor 11q25.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
64326RFWD2COP1 | RNF200ring finger and WD repeat domain 2, E3 ubiquitin protein ligase1q25.1-q25.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
84320ACBD6-acyl-CoA binding domain containing 61q25.3CV:PGCnp
DMG:Jaffe_2016
259266ASPMASP | Calmbp1 | MCPH5abnormal spindle microtubule assembly1q31CV:PGCnp
GO_Annotation
PMID:cooccur
2165F13BFXIIIBcoagulation factor XIII B chain1q31-q32.1CV:PGCnp
DMG:Wockner_2014
51377UCHL5CGI-70 | INO80R | UCH-L5 | UCH37ubiquitin C-terminal hydrolase L51q32CV:PGCnp
DMG:Jaffe_2016
9580SOX13ICA12 | Sox-13SRY-box 131q32CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
5929RBBP5RBQ3 | SWD1retinoblastoma binding protein 51q32CV:PGCnp
DNM:Gulsuner_2013
Chromatin Remodeling Genes
59349KLHL12C3IP1 | DKIRkelch like family member 121q32.1DMG:Jaffe_2016
Network
55705IPO9Imp9importin 91q32.1CV:PGCnp
DMG:Jaffe_2016
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
5525PPP2R5AB56A | PR61Aprotein phosphatase 2 regulatory subunit B', alpha1q32.2-q32.3CV:PGCnp
DMG:Wockner_2014
2058EPRSEARS | GLUPRORS | PARS | PIG32 | QARS | QPRSglutamyl-prolyl-tRNA synthetase1q41GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
142PARP1ADPRT | ADPRT 1 | ADPRT1 | ARTD1 | PARP | PARP-1 | PPOL | pADPRT-1poly(ADP-ribose) polymerase 11q41-q42CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
8443GNPATDAP-AT | DAPAT | DHAPAT | RCDP2glyceronephosphate O-acyltransferase1q42Association
CV:PGCnp
PMID:cooccur
CompositeSet
7107GPR137BTM7SF1G protein-coupled receptor 137B1q42-q43CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7257TSNAXTRAXtranslin-associated factor X1q42.1Association
DNM:Fromer_2014
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
2052EPHX1EPHX | EPOX | HYL1 | MEHepoxide hydrolase 11q42.1CV:PGCnp
DMG:Wockner_2014
29097CNIH4CNIH-4 | HSPC163cornichon family AMPA receptor auxiliary protein 41q42.11CV:PGCnp
Expression
64746ACBD3GCP60 | GOCAP1 | GOLPH1 | PAP7acyl-CoA binding domain containing 31q42.12CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
29920PYCR2HLD10 | P5CR2pyrroline-5-carboxylate reductase family member 21q42.12CV:PGCnp
PMID:cooccur
116841SNAP47C1orf142 | ESFI5812 | HEL-S-290 | HEL170 | SNAP-47 | SVAP1synaptosome associated protein 47kDa1q42.13CV:PGCnp
DMG:Wockner_2014
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5664PSEN2AD3L | AD4 | CMD1V | PS2 | STM2presenilin 21q42.13CV:PGCnp
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
84886C1orf198-chromosome 1 open reading frame 1981q42.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
128061C1orf131-chromosome 1 open reading frame 1311q42.2CV:PGCnp
DMG:Jaffe_2016
84284NTPCRC1orf57 | HCR-NTPasenucleoside-triphosphatase, cancer-related1q42.2CV:PGCnp
23029RBM34-RNA binding motif protein 341q42.3DMG:Jaffe_2016
9453GGPS1GGPPS | GGPPS1geranylgeranyl diphosphate synthase 11q43CV:PGCnp
DMG:Nishioka_2013
64216TFB2MHkp1 | mtTFB2transcription factor B2, mitochondrial1q44CV:PGCnp
DMG:Jaffe_2016
8455ATRNDPPT-L | MGCAattractin20p13CV:PGCnp
PMID:cooccur
140809SRXN1C20orf139 | Npn3 | SRX | SRX1sulfiredoxin 120p13CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
6628SNRPBCCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-Bsmall nuclear ribonucleoprotein polypeptides B and B120p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23054NCOA6AIB3 | ASC2 | NRC | PRIP | RAP250 | TRBPnuclear receptor coactivator 620q11CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
22919MAPRE1EB1microtubule associated protein RP/EB family member 120q11.1-q11.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
83658DYNLRB1BITH | BLP | DNCL2A | DNLC2A | ROBLD1dynein light chain roadblock-type 120q11.21CV:PGCnp
DMG:Jaffe_2016
CompositeSet
191AHCYSAHH | adoHcyaseadenosylhomocysteinase20q11.22CV:PGCnp
DMG:Wockner_2014
Network
60625DHX35C20orf15 | DDX35 | KAIA0875DEAH-box helicase 3520q11.22-q12CV:PGCnpAscano FMRP targets
55969C20orf24PNAS-11 | RIP5chromosome 20 open reading frame 2420q11.23CV:PGCnp
DMG:vanEijk_2014
81610FAM83DC20orf129 | CHICA | dJ616B8.3family with sequence similarity 83 member D20q11.23CV:PGCnp
23051ZHX3TIX1zinc fingers and homeoboxes 320q12CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
81031SLC2A10ATS | GLUT10solute carrier family 2 member 1020q13.1CV:GWASdb
CV:PGCnp
5770PTPN1PTP1Bprotein tyrosine phosphatase, non-receptor type 120q13.1-q13.2CV:PGCnp
Network
PMID:cooccur
51604PIGTCGI-06 | MCAHS3 | NDAP | PNH2phosphatidylinositol glycan anchor biosynthesis class T20q13.12CV:PGCnp
DMG:Jaffe_2016
6227RPS21HLDF | S21ribosomal protein S2120q13.3CV:PGCnp
DMG:Nishioka_2013
10950BTG3ANA | TOB5 | TOB55 | TOFABTG family member 321q21.1CV:PGCnp
DMG:Jaffe_2016
10694CCT8C21orf112 | Cctq | D21S246 | PRED71chaperonin containing TCP1 subunit 821q22.11CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
754PTTG1IPC21orf1 | C21orf3 | PBFpituitary tumor-transforming 1 interacting protein21q22.3DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
8624PSMG1C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1proteasome (prosome, macropain) assembly chaperone 121q22.3CV:PGCnp
7485WRBCHD5 | GET1tryptophan rich basic protein21q22.3CV:PGCnp
DMG:Wockner_2014
4668NAGAD22S674 | GALBN-acetylgalactosaminidase, alpha-22q11CV:GWASdb
CV:PGCnp
56478EIF4ENIF14E-T | Clast4eukaryotic translation initiation factor 4E nuclear import factor 122q11.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
PMID:cooccur
CompositeSet
64976MRPL40L40mt | MRP-L22 | MRP-L40 | MRPL22 | NLVCF | URIMmitochondrial ribosomal protein L4022q11.2CNV:YES
CV:PGCnp
GSMA_I
PMID:cooccur
23753SDF2L1-stromal cell derived factor 2 like 122q11.21CV:PGCnp
GSMA_I
1399CRKL-v-crk avian sarcoma virus CT10 oncogene homolog-like22q11.21CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
Network
5902RANBP1HTF9ARAN binding protein 122q11.21Association
CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GR_WM
GSMA_I
Network
PMID:cooccur
5625PRODHHSPOX2 | PIG6 | POX | PRODH1 | PRODH2 | TP53I6proline dehydrogenase (oxidase) 122q11.21Association
CNV:YES
Core
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
9342SNAP29CEDNIK | SNAP-29synaptosome associated protein 29kDa22q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
GSMA_I
PMID:cooccur
EXOCYTOSIS
25829TMEM184BC22orf5 | FM08 | HS5O6A | HSPC256transmembrane protein 184B22q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
150275CCDC117dJ366L4.1coiled-coil domain containing 11722q12.1CV:PGCnp
GSMA_I
23541SEC14L2C22orf6 | SPF | TAP | TAP1SEC14 like lipid binding 222q12.2CV:PGCnp
GSMA_I
4733DRG1NEDD3developmentally regulated GTP binding protein 122q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
6721SREBF2SREBP-2 | SREBP2 | bHLHd2sterol regulatory element binding transcription factor 222q13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
23492CBX7-chromobox 722q13.1CV:PGCnp
DMG:Nishioka_2013
7008TEF-thyrotrophic embryonic factor22q13.2CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
26286ARFGAP3ARFGAP1ADP ribosylation factor GTPase activating protein 322q13.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
410ARSAMLDarylsulfatase A22q13.33CV:PGCnp
PMID:cooccur
6305SBF1CMT4B3 | DENND7A | MTMR5SET binding factor 122q13.33CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9792SERTAD2Sei-2 | TRIP-Br2SERTA domain containing 22p14CV:PGCnp
DMG:Jaffe_2016
9736USP34-ubiquitin specific peptidase 342p15CV:PGCnp
Expression
CompositeSet
Darnell FMRP targets
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
27248ERLEC1C2orf30 | CIM | CL24936 | CL25084 | HEL117 | XTP3-B | XTP3TPBendoplasmic reticulum lectin 12p16.2CV:PGCnp
90411MCFD2F5F8D | F5F8D2 | LMAN1IP | SDNSFmultiple coagulation factor deficiency 22p21CV:PGCnp
DMG:Nishioka_2013
9553MRPL33C2orf1 | L33mt | MRP-L33 | RPL33Lmitochondrial ribosomal protein L332p21CV:PGCnp
79833GEMIN6-gem nuclear organelle associated protein 62p22.1CV:PGCnp
DMG:Nishioka_2013
11321GPN1ATPBD1A | MBDIN | NTPBP | RPAP4 | XAB1GPN-loop GTPase 12p23.3CV:GWASdb
CV:PGCnp
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
22950SLC4A1APHLC3solute carrier family 4 member 1 adaptor protein2p23.3CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
4358MPV17MTDPS6 | SYM1MpV17 mitochondrial inner membrane protein2p23.3CV:PGCnp
9475ROCK2ROCK-IIRho associated coiled-coil containing protein kinase 22p24CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
64342HS1BP3ETM2 | HS1-BP3HCLS1 binding protein 32p24.1CV:PGCnp
130502TTC32-tetratricopeptide repeat domain 322p24.1CV:PGCnp
DMG:Jaffe_2016
28951TRIB2C5FW | GS3955 | TRB2tribbles pseudokinase 22p24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
52ACP1HAAP | LMW-PTPacid phosphatase 1, soluble2p25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
4953ODC1ODCornithine decarboxylase 12p25CV:PGCnp
DMG:Nishioka_2013
10130PDIA6ERP5 | P5 | TXNDC7protein disulfide isomerase family A member 62p25.1CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
7260TSSC1-tumor suppressing subtransferable candidate 12p25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
8853ASAP2AMAP2 | CENTB3 | DDEF2 | PAG3 | PAP | Pap-alpha | SHAG1ArfGAP with SH3 domain, ankyrin repeat and PH domain 22p25|2p24CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
79901CYBRD1CYB561A2 | DCYTB | FRRS3cytochrome b reductase 12q31.1CV:PGCnp
23314SATB2GLSSSATB homeobox 22q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
3417IDH1HEL-216 | HEL-S-26 | IDCD | IDH | IDP | IDPC | PICDisocitrate dehydrogenase 1 (NADP+)2q33.3CV:PGCnp
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL METABOLISM
Chromatin Remodeling Genes
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
55619DOCK10DRIP2 | Nbla10300 | ZIZ3dedicator of cytokinesis 102q36.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
CompositeSet
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
2632GBE1APBD | GBE | GSD4glucan (1,4-alpha-), branching enzyme 13p12.3CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
9861PSMD6Rpn7 | S10 | SGA-113M | p42A | p44S10proteasome 26S subunit, non-ATPase 63p14.1CV:PGCnp
Network
9039UBA3NAE2 | UBE1C | hUBA3ubiquitin like modifier activating enzyme 33p14.1CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
201626PDE122'-PDEphosphodiesterase 123p14.3CV:PGCnp
DMG:Wockner_2014
51099ABHD5CDS | CGI58 | IECN2 | NCIE2abhydrolase domain containing 53p21CV:PGCnp
DMG:Jaffe_2016
11344TWF2A6RP | A6r | MSTP011 | PTK9Ltwinfilin actin binding protein 23p21.1CV:PGCnp
DMG:Wockner_2014
LK:YES
28972SPCS1HSPC033 | SPC1 | SPC12 | YJR010C-Asignal peptidase complex subunit 13p21.1CV:PGCnp
LK:YES
24142NAT6FUS-2 | FUS2N-acetyltransferase 63p21.3DMG:vanEijk_2014
4292MLH1COCA2 | FCC2 | HNPCC | HNPCC2 | hMLH1mutL homolog 13p21.3CV:PGCnp
GSMA_I
7866IFRD2IFNRP | SKMc15 | SM15interferon-related developmental regulator 23p21.3CV:PGCnp
DMG:Wockner_2014
7867MAPKAPK33PK | MAPKAP-K3 | MAPKAP3 | MAPKAPK-3 | MK-3mitogen-activated protein kinase-activated protein kinase 33p21.3CV:PGCnp
DMG:Jaffe_2016
65010SLC26A6-solute carrier family 26 member 63p21.3CV:PGCnp
GO_Annotation
79714CCDC51-coiled-coil domain containing 513p21.31CV:PGCnpAscano FMRP targets
64925CCDC71-coiled-coil domain containing 713p21.31CV:PGCnp
2803GOLGA4CRPF46 | GCP2 | GOLG | MU-RMS-40.18 | p230golgin A43p22-p21.3CV:PGCnp
GSMA_I
9852EPM2AIP1-EPM2A (laforin) interacting protein 13p22.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10289EIF1BGC20eukaryotic translation initiation factor 1B3p22.1CV:PGCnp
DMG:Jaffe_2016
Network
25994HIGD1AHIG1 | RCF1aHIG1 hypoxia inducible domain family member 1A3p22.1CV:PGCnp
DMG:Jaffe_2016
201595STT3BCDG1X | SIMP | STT3-BSTT3B, catalytic subunit of the oligosaccharyltransferase complex3p23CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
23609MKRN2HSPC070 | RNF62makorin ring finger protein 23p25CV:PGCnp
GSMA_I
27258LSM3SMX4 | USS2 | YLR438CLSM3 homolog, U6 small nuclear RNA and mRNA degradation associated3p25.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
CompositeSet
6529SLC6A1GABATHG | GABATR | GAT1 | MAEsolute carrier family 6 member 13p25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
NEUROTRANSMITTER METABOLISM
CompositeSet
Darnell FMRP targets
10342TFGHMSNP | SPG57 | TF6 | TRKT3TRK-fused gene3q12.2DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CompositeSet
56987BBXARTC1 | HBP2 | HSPC339 | MDS001bobby sox homolog (Drosophila)3q13.1CV:GWASdb
CV:PGCnp
CV:PheWAS
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
64422ATG3APG3 | APG3-LIKE | APG3L | PC3-96autophagy related 33q13.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
6578SLCO2A1MATR1 | OATP2A1 | PGT | PHOAR2 | SLC21A2solute carrier organic anion transporter family member 2A13q21CV:PGCnp
26577PCOLCE2PCPE2procollagen C-endopeptidase enhancer 23q21-q24CV:GWASdb
CV:PGCnp
84925DIRC2RCC4disrupted in renal carcinoma 23q21.1CV:PGCnp
56667MUC13DRCC1 | MUC-13mucin 13, cell surface associated3q21.2CV:PGCnp
28999KLF15KKLFKruppel-like factor 153q21.3CV:GWASdb
CV:PGCnp
9276COPB2beta'-COPcoatomer protein complex subunit beta 2 (beta prime)3q23CV:GWASdb
DMG:Jaffe_2016
Network
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
27230SERP1RAMP4stress-associated endoplasmic reticulum protein 13q25.1CV:PGCnp
DMG:Jaffe_2016
51714SELT-selenoprotein T3q25.1CV:PGCnp
DMG:Wockner_2014
51319RSRC1BM-011 | SFRS21 | SRrp53arginine/serine-rich coiled-coil 13q25.32CV:PGCnp
PMID:cooccur
86ACTL6AACTL6 | ARPN-BETA | Arp4 | BAF53A | INO80Kactin like 6A3q26.33CV:PGCnp
DMG:Jaffe_2016
131118DNAJC19PAM18 | TIM14 | TIMM14DnaJ heat shock protein family (Hsp40) member C193q26.33CV:GWASdb
CV:PGCnp
55689YEATS2-YEATS domain containing 23q27.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5708PSMD2P97 | RPN1 | S2 | TRAP2proteasome 26S subunit, non-ATPase 23q27.1CV:PGCnp
DNM:Fromer_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
5437POLR2HRPABC3 | RPB17 | RPB8polymerase (RNA) II subunit H3q28DMG:Jaffe_2016
5504PPP1R2IPP-2 | IPP2protein phosphatase 1 regulatory inhibitor subunit 23q29CV:PGCnp
PMID:cooccur
7037TFRCCD71 | IMD46 | T9 | TFR | TFR1 | TR | TRFR | p90transferrin receptor3q29CNV:YES
CV:PGCnp
Network
PMID:cooccur
22916NCBP2CBC2 | CBP20 | NIP1 | PIG55nuclear cap binding protein subunit 23q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
152002XXYLT1C3orf21xyloside xylosyltransferase 13q29CV:PGCnp
DMG:Jaffe_2016
55646LYARZC2HC2 | ZLYARLy1 antibody reactive4p16.3CV:PGCnp
5471PPATATASE | GPAT | PRATphosphoribosyl pyrophosphate amidotransferase4q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
84273NOA1C4orf14 | MTG3 | hAtNOS1 | hNOA1 | mAtNOS1nitric oxide associated 14q12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4283CXCL9CMK | Humig | MIG | SCYB9 | crg-10C-X-C motif chemokine ligand 94q21PMID:cooccur
58478ENOPH1E1 | MASA | MST145 | mtnCenolase-phosphatase 14q21.22CV:PGCnp
DMG:Jaffe_2016
57563KLHL8-kelch like family member 84q22.1CV:PGCnp
DMG:Wockner_2014
8404SPARCL1MAST 9 | MAST9 | PIG33 | SC1SPARC like 14q22.1CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
152926PPM1KBDP | MSUDMV | PP2Ckappa | PP2Cm | PTMP | UG0882E07protein phosphatase, Mg2+/Mn2+ dependent 1K4q22.1CV:GWASdb
CV:PGCnp
23173METAP1MAP1A | MetAP1Amethionyl aminopeptidase 14q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
9061PAPSS1ATPSK1 | PAPSS | SK13'-phosphoadenosine 5'-phosphosulfate synthase 14q24CV:PGCnp
DMG:Nishioka_2013
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
9871SEC24DCLCRP2SEC24 homolog D, COPII coat complex component4q26CV:PGCnp
DMG:Jaffe_2016
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
5481PPIDCYP-40 | CYPDpeptidylprolyl isomerase D4q31.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
152503SH3D19EBP | EVE1 | Kryn | SH3P19SH3 domain containing 194q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
54969C4orf27-chromosome 4 open reading frame 274q33CV:PGCnp
2195FAT1CDHF7 | CDHR8 | FAT | ME5 | hFat1FAT atypical cadherin 14q35CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
291SLC25A4AAC1 | ANT | ANT 1 | ANT1 | MTDPS12 | PEO2 | PEO3 | PEOA2 | T1solute carrier family 25 member 44q35CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
29102DROSHAETOHI2 | HSA242976 | RANSE3L | RN3 | RNASE3L | RNASENdrosha ribonuclease III5p13.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
54505DHX29DDX29DEAH-box helicase 295q11.2DMG:Wockner_2014
153129SLC38A9URLC11solute carrier family 38 member 95q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
91942NDUFAF2B17.2L | MMTN | NDUFA12L | mimitinNADH:ubiquinone oxidoreductase complex assembly factor 25q12.1CV:PGCnp
8546AP3B1ADTB3 | ADTB3A | HPS | HPS2 | PEadaptor related protein complex 3 beta 1 subunit5q14.1CV:PGCnp
DMG:Jaffe_2016
5480PPICCYPCpeptidylprolyl isomerase C5q23.2CV:PGCnp
PMID:cooccur
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8974P4HA2-prolyl 4-hydroxylase subunit alpha 25q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
2107ETF1D5S1995 | ERF | ERF1 | RF1 | SUP45L1 | TB3-1eukaryotic translation termination factor 15q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
Expression
GSMA_I
Network
153527ZMAT2Ptg-12 | Snu23zinc finger matrin-type 25q31.3CV:PGCnp
GSMA_I
23438HARS2HARSL | HARSR | HO3 | PRLTS2histidyl-tRNA synthetase 2, mitochondrial5q31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
Ascano FMRP targets
3550IKCSA2 | REDIK cytokine, down-regulator of HLA II5q31.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
Ascano FMRP targets
54853WDR55-WD repeat domain 555q31.3CV:PGCnp
GSMA_I
51520LARSHSPC192 | ILFS1 | LARS1 | LEURS | LEUS | LFIS | LRS | PIG44 | RNTLS | hr025Clleucyl-tRNA synthetase5q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
79685SAP30LNS4ATP2SAP30-like5q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
134510UBLCP1CPUB1ubiquitin like domain containing CTD phosphatase 15q33.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
821CANXCNX | IP90 | P90calnexin5q35CV:PGCnp
DNM:Xu_2012
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
CompositeSet
51121RPL26L1RPL26P1ribosomal protein L26 like 15q35.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_IIA
8992ATP6V0E1ATP6H | ATP6V0E | M9.2 | Vma21 | Vma21pATPase H+ transporting V0 subunit e15q35.1CV:PGCnp
GSMA_IIA
57179KIAA1191p33MONOX | p60MONOXKIAA11915q35.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
55651NHP2DKCB2 | NHP2P | NOLA2NHP2 ribonucleoprotein5q35.3CV:PGCnp
DMG:Wockner_2014
27232GNMTHEL-S-182mPglycine N-methyltransferase6p12GSMA_I
GSMA_IIE
PMID:cooccur
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
3326HSP90AB1D6S182 | HSP84 | HSP90B | HSPC2 | HSPCBheat shock protein 90kDa alpha family class B member 16p12CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2938GSTA1GST-epsilon | GST2 | GSTA1-1 | GTH1glutathione S-transferase alpha 16p12.1CV:PGCnp
Expression
GSMA_IIE
PMID:cooccur
28978TMEM14AC6orf73 | PTD011transmembrane protein 14A6p12.2CV:PGCnp
GSMA_IIE
988CDC5LCDC5 | CDC5-LIKE | CEF1 | PCDC5RP | dJ319D22.1cell division cycle 5 like6p21CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Network
441150C6orf226-chromosome 6 open reading frame 2266p21.1DMG:Jaffe_2016
GSMA_I
GSMA_IIE
57505AARS2AARSL | COXPD8 | LKENP | MT-ALARS | MTALARSalanyl-tRNA synthetase 2, mitochondrial6p21.1CV:PGCnp
GSMA_IIE
Ascano FMRP targets
10695CNPY3CAG4A | ERDA5 | PRAT4A | TNRC5canopy FGF signaling regulator 36p21.1DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
10817FRS3FRS2-beta | FRS2B | FRS2beta | SNT-2 | SNT2fibroblast growth factor receptor substrate 36p21.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
3106HLA-BAS | Bw-47 | Bw-50 | HLAB | SPDA1major histocompatibility complex, class I, B6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
Network
PMID:cooccur
3107HLA-CD6S204 | HLA-JY3 | HLAC | HLC-C | PSORS1major histocompatibility complex, class I, C6p21.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_I
Network
PMID:cooccur
CompositeSet
8449DHX16DBP2 | DDX16 | PRO2014 | PRP8 | PRPF2 | Prp2DEAH-box helicase 166p21.3CV:GWASdb
GSMA_I
3134HLA-FCDA12 | HLA-5.4 | HLA-CDA12 | HLAFmajor histocompatibility complex, class I, F6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
2968GTF2H4P52 | TFB2 | TFIIHgeneral transcription factor IIH subunit 46p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10786SLC17A3GOUT4 | NPT4 | UAQTL4solute carrier family 17 member 36p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
10471PFDN6H2-KE2 | HKE2 | KE-2 | PFD6prefoldin subunit 66p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10473HMGN4HMG17L3 | NHChigh mobility group nucleosomal binding domain 46p21.3CV:PGCnp
GSMA_I
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3304HSPA1BHSP70-1B | HSP70-2 | HSP70.2heat shock protein family A (Hsp70) member 1B6p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3006HIST1H1CH1.2 | H1C | H1F2 | H1s-1histone cluster 1, H1c6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
23564DDAH2DDAH | DDAHII | G6a | HEL-S-277 | NG30dimethylarginine dimethylaminohydrolase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
10537UBDFAT10 | GABBR1 | UBD-3ubiquitin D6p21.3CV:PGCnp
PMID:cooccur
9656MDC1NFBD1mediator of DNA damage checkpoint 16p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
7920ABHD16ABAT5 | D6S82E | NG26 | PP199abhydrolase domain containing 16A6p21.3CV:PGCnp
DMG:Montano_2016
GSMA_I
6890TAP1ABC17 | ABCB2 | APT1 | D6S114E | PSF-1 | PSF1 | RING4 | TAP1*0102N | TAP1Ntransporter 1, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
7923HSD17B8D6S2245E | FABG | FABGL | H2-KE6 | HKE6 | KE6 | RING2 | SDR30C1 | dJ1033B10.9hydroxysteroid (17-beta) dehydrogenase 86p21.3CV:PGCnp
GSMA_I
28973MRPS18BC6orf14 | HSPC183 | HumanS18a | MRP-S18-2 | MRPS18-2 | PTD017 | S18amtmitochondrial ribosomal protein S18B6p21.3DMG:Jaffe_2016
GSMA_I
2289FKBP5AIG6 | FKBP51 | FKBP54 | P54 | PPIase | Ptg-10FK506 binding protein 56p21.31CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
6732SRPK1SFRSK1SRSF protein kinase 16p21.31CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIE
29964PRICKLE4C6orf49 | OBTP | OEBT | TOMM6prickle planar cell polarity protein 46p21.31DMG:Jaffe_2016
GSMA_I
GSMA_IIE
6631SNRPCU1C | Yhc1small nuclear ribonucleoprotein polypeptide C6p21.31CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
221504ZBTB9ZNF919zinc finger and BTB domain containing 96p21.32CV:PGCnp
DMG:Wockner_2014
GSMA_I
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
5987TRIM27RFP | RNF76tripartite motif containing 276p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
80345ZSCAN16ZNF392 | ZNF435 | dJ265C24.3zinc finger and SCAN domain containing 166p22.1GSMA_I
79897RPP21C6orf135 | CAT60ribonuclease P/MRP 21kDa subunit6p22.1GSMA_I
11118BTN3A2BT3.2 | BTF4 | BTN3.2 | CD277butyrophilin subfamily 3 member A26p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8334HIST1H2ACH2A/l | H2AFL | dJ221C16.4histone cluster 1, H2ac6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
29116MYLIPIDOL | MIRmyosin regulatory light chain interacting protein6p22.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
81688C6orf62Nbla00237 | XTP12 | dJ30M3.2chromosome 6 open reading frame 626p22.3CV:PGCnp
GSMA_I
9972NUP153HNUP153 | N153nucleoporin 153kDa6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
51406NOL7C6orf90 | PQBP3 | RARG-1 | dJ223E5.2nucleolar protein 76p23CV:PGCnp
GSMA_I
3720JARID2JMJjumonji and AT-rich interaction domain containing 26p24-p23Association
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Ascano FMRP targets
Chromatin Remodeling Genes
51522TMEM14CC6orf53 | HSPC194 | MSTP073 | NET26 | bA421M1.6transmembrane protein 14C6p24.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
2296FOXC1ARA | FKHL7 | FREAC-3 | FREAC3 | IGDA | IHG1 | IRID1 | RIEG3forkhead box C16p25CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
2762GMDSGMD | SDR3E1GDP-mannose 4,6-dehydratase6p25CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
GSMA_I
94234FOXQ1HFH1forkhead box Q16p25CV:PGCnp
GSMA_I
PMID:cooccur
10667FARS2COXPD14 | FARS1 | HSPC320 | PheRSphenylalanyl-tRNA synthetase 2, mitochondrial6p25.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
4082MARCKS80K-L | MACS | PKCSL | PRKCSLmyristoylated alanine rich protein kinase C substrate6q22.2CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
23328SASH1SH3D6A | dJ323M4 | dJ323M4.1SAM and SH3 domain containing 16q24.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
29074MRPL18HSPC071 | L18mt | MRP-L18mitochondrial ribosomal protein L186q25.3CV:PGCnp
51373MRPS17HSPC011 | MRP-S17 | RPMS17 | S17mtmitochondrial ribosomal protein S177p11CV:PGCnp
81552VOPP1ECOP | GASPvesicular, overexpressed in cancer, prosurvival protein 17p11.2CV:PGCnp
DEG:Maycox_2009
23480SEC61GSSS1Sec61 translocon gamma subunit7p11.2CV:PGCnp
DMG:Jaffe_2016
222068TMED4ERS25 | GMP25iso | HNLF | p24a3 | p24alpha3transmembrane p24 trafficking protein 47p13CV:PGCnp
DMG:Jaffe_2016
79020C7orf25-chromosome 7 open reading frame 257p14.1CV:PGCnp
8887TAX1BP1CALCOCO3 | T6BP | TXBP151Tax1 (human T-cell leukemia virus type I) binding protein 17p15CV:PGCnp
DMG:Jaffe_2016
11097NUPL2CG1 | NLP-1 | NLP_1 | hCG1nucleoporin like 27p15CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
54504CPVLHVLPcarboxypeptidase, vitellogenic like7p15.1CV:PGCnp
GO_Annotation
PMID:cooccur
4521NUDT1MTH1nudix hydrolase 17p22CV:PGCnp
LK:YES
11014KDELR2ELP-1 | ERD2.2KDEL endoplasmic reticulum protein retention receptor 27p22.1CV:PGCnp
DMG:Jaffe_2016
23353SUN1UNC84ASad1 and UNC84 domain containing 17p22.3CV:PGCnp
26608TBL2WBSCR13 | WS-betaTRPtransducin (beta)-like 27q11.23CNV:YES
DMG:Jaffe_2016
PMID:cooccur
84163GTF2IRD2FP630 | GTF2IRD2 alpha | GTF2IRD2AGTF2I repeat domain containing 27q11.23CV:PGCnp
1174AP1S1AP19 | CLAPS1 | EKV3 | MEDNIK | SIGMA1Aadaptor related protein complex 1 sigma 1 subunit7q22.1CV:PGCnpCompositeSet
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
1020CDK5LIS7 | PSSALREcyclin-dependent kinase 57q36CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
6386SDCBPMDA-9 | MDA9 | ST1 | SYCL | TACIP18syndecan binding protein8q12CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
Potential synaptic genes
23212RRS1-ribosome biogenesis regulator homolog8q13.1CV:PGCnp
9650MTFR1CHPPR | FAM54A2mitochondrial fission regulator 18q13.1CV:PGCnp
DMG:Jaffe_2016
23462HEY1BHLHb31 | CHF2 | HERP2 | HESR1 | HRT-1 | OAF1 | hHRT1hes related family bHLH transcription factor with YRPW motif 18q21CV:PGCnp
GO_Annotation
2167FABP4A-FABP | AFABP | ALBP | HEL-S-104 | aP2fatty acid binding protein 48q21DNM:Fromer_2014
PMID:cooccur
CompositeSet
5828PEX2PAF1 | PBD5A | PBD5B | PMP3 | PMP35 | PXMP3 | RNF72 | ZWS3peroxisomal biogenesis factor 28q21.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
6921TCEB1SIII | eloCtranscription elongation factor B subunit 18q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6156RPL30L30ribosomal protein L308q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
7381UQCRBMC3DN3 | QCR7 | QP-C | QPC | UQBC | UQBP | UQCR6 | UQPCubiquinol-cytochrome c reductase binding protein8q22CV:PGCnp
DMG:Wockner_2014
Expression
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
7553ZNF7HF.16 | KOX4 | zf30zinc finger protein 78q24CV:PGCnp
DMG:Wockner_2014
64798DEPTORDEP.6 | DEPDC6DEP domain containing MTOR-interacting protein8q24.12CV:PGCnp
DMG:Jaffe_2016
83940TATDN1CDA11TatD DNase domain containing 18q24.13DMG:Jaffe_2016
9897KIAA0196RTSC | RTSC1 | SPG8KIAA01968q24.13CV:PGCnp
65265C8orf33-chromosome 8 open reading frame 338q24.3DMG:Jaffe_2016
84948TIGD5-tigger transposable element derived 58q24.3CV:PGCnp
DMG:Wockner_2014
51010EXOSC3CGI-102 | PCH1B | RRP40 | Rrp40p | bA3J10.7 | hRrp-40 | p10exosome component 39p11CV:PGCnp
PMID:cooccur
7016TESK1-testis-specific kinase 19p13CV:PGCnp
DMG:vanEijk_2014
25853DCAF12CT102 | KIAA1892 | TCC52 | WDR40ADDB1 and CUL4 associated factor 129p13.3CV:PGCnp
DMG:Jaffe_2016
Expression
51510CHMP5C9orf83 | CGI-34 | HSPC177 | PNAS-2 | SNF7DC2 | Vps60charged multivesicular body protein 59p13.3CV:PGCnp
26953RANBP6-RAN binding protein 69p24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
81689ISCA1HBLD2 | ISA1 | hIscAiron-sulfur cluster assembly 19q21.33CV:PGCnp
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
158293FAM120AOSC9orf10OSfamily with sequence similarity 120A opposite strand9q22.31CV:PGCnp
23424TDRD7CATC4 | PCTAIRE2BP | TRAPtudor domain containing 79q22.33CV:PGCnp
DMG:Wockner_2014
55357TBC1D2PARIS-1 | PARIS1 | TBC1D2ATBC1 domain family member 29q22.33CV:PGCnp
PMID:cooccur
2790GNG10-G protein subunit gamma 109q31.3CV:PGCnpCANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
4702NDUFA8CI-19KD | CI-PGIV | PGIVNADH:ubiquinone oxidoreductase subunit A89q33.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
10383TUBB4BBeta2 | TUBB2 | TUBB2Ctubulin beta 4B class IVb9q34CV:PGCnpSTRUCTURAL PLASTICITY
27348TOR1BDQ1torsin family 1 member B9q34CV:GWASdb
CV:PGCnp
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
6709SPTAN1EIEE5 | NEAS | SPTA2spectrin alpha, non-erythrocytic 19q34.11Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
138428PTRH1C9orf115 | PTH1peptidyl-tRNA hydrolase 1 homolog9q34.11DMG:Jaffe_2016
83543AIF1LC9orf58 | IBA2allograft inflammatory factor 1-like9q34.13-q34.3CV:PGCnp
8573CASKCAGH39 | CAMGUK | CMG | FGS4 | LIN2 | MICPCH | MRXSNA | TNRC8calcium/calmodulin-dependent serine protein kinase (MAGUK family)Xp11.4CV:PGCnp
Expression
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
Potential synaptic genes
5931RBBP7RbAp46retinoblastoma binding protein 7Xp22.2CV:PGCnpChromatin Remodeling Genes
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
5716PSMD10dJ889N15.2 | p28 | p28(GANK)proteasome 26S subunit, non-ATPase 10Xq22.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
27336HTATSF1TAT-SF1 | TATSF1 | dJ196E23.2HIV-1 Tat specific factor 1Xq26.3CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
3654IRAK1IRAK | pelleinterleukin 1 receptor associated kinase 1Xq28CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes