Search results: The pahtway p2033 has 712 genes in the original annotation. Currently, there are 444 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
10006ABI1ABI-1 | ABLBP4 | E3B1 | NAP1BP | SSH3BP | SSH3BP1abl interactor 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
8872CDC123C10orf7 | D123cell division cycle 12310p13CV:PGCnp
6251RSU1RSP-1Ras suppressor protein 110p13CV:PGCnp
DMG:Wockner_2014
10730YME1L1FTSH | MEG4 | PAMP | YME1LYME1 like 1 ATPase10p14CV:PGCnp
10771ZMYND11BRAM1 | BS69 | MRD30zinc finger MYND-type containing 1110p14CV:PGCnp
DNM:Fromer_2014
CompositeSet
22944KINBTCD | KIN17 | Rts2Kin17 DNA and RNA binding protein10p14CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
26019UPF2HUPF2 | RENT2 | smg-3UPF2 regulator of nonsense transcripts homolog (yeast)10p14-p13CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
Ascano FMRP targets
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
54788DNAJB12DJ10DnaJ heat shock protein family (Hsp40) member B1210q22.1CV:PGCnp
DMG:Montano_2016
310ANXA7ANX7 | SNX | SYNEXINannexin A710q22.2PMID:cooccur
132ADKAKadenosine kinase10q22|10q11-q24CV:PGCnp
PMID:cooccur
9562MINPP1HIPER1 | MINPP2 | MIPPmultiple inositol-polyphosphate phosphatase 110q23CV:GWASdb
CV:PGCnp
10285SMNDC1SMNR | SPF30 | TDRD16Csurvival motor neuron domain containing 110q23CV:PGCnp
DMG:Jaffe_2016
29760BLNKAGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bcaB-cell linker10q23.2-q23.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
26509MYOFFER1L3myoferlin10q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
1147CHUKIKBKA | IKK-alpha | IKK1 | IKKA | NFKBIKA | TCF16conserved helix-loop-helix ubiquitous kinase10q24-q25CV:PGCnp
Network
22978NT5C2GMP | NT5B | PNT5 | SPG45 | SPG65 | cN-II5'-nucleotidase, cytosolic II10q24.32CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
9748SLKLOSK | STK2 | bA16H23.1 | se20-9STE20 like kinase10q24.33CV:PGCnp
DMG:Jaffe_2016
10935PRDX3AOP-1 | AOP1 | HBC189 | MER5 | PRO1748 | SP-22 | prx-IIIperoxiredoxin 310q25-q26CV:PGCnp
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2263FGFR2BBDS | BEK | BFR-1 | CD332 | CEK3 | CFD1 | ECT1 | JWS | K-SAM | KGFR | TK14 | TK25fibroblast growth factor receptor 210q26CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
23279NUP160-nucleoporin 160kDa11p11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
2132EXT2SOTV | SSMSexostosin glycosyltransferase 211p12-p11CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
10480EIF3MB5 | GA17 | PCID1 | TANGO7 | hfl-B5eukaryotic translation initiation factor 3 subunit M11p13CV:PGCnp
DMG:Jaffe_2016
847CAT-catalase11p13CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
5682PSMA1HC2 | HEL-S-275 | NU | PROS30proteasome subunit alpha 111p15.1CV:PGCnp
DMG:Jaffe_2016
Network
10978CLP1HEAB | hClp1cleavage and polyadenylation factor I subunit 111q12CV:PGCnp
DMG:Jaffe_2016
9246UBE2L6RIG-B | UBCH8ubiquitin conjugating enzyme E2 L611q12CV:PGCnp
8500PPFIA1LIP.1 | LIP1 | LIPRINPTPRF interacting protein alpha 111q13.3CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
6392SDHDCBT1 | CII-4 | CWS3 | PGL | PGL1 | QPs3 | SDH4 | cybSsuccinate dehydrogenase complex subunit D11q23CV:PGCnp
GSMA_I
834CASP1ICE | IL1BC | P45caspase 111q23DEG:Sanders_2013
GSMA_I
Network
372ARCN1COPDarchain 111q23.3CV:PGCnp
GSMA_I
PMID:cooccur
3703STT3AITM1 | STT3-A | TMCSTT3A, catalytic subunit of the oligosaccharyltransferase complex11q23.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
4900NRGNRC3 | hngneurogranin11q24Association
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
11171STRAPMAWD | PT-WD | UNRIPserine/threonine kinase receptor associated protein12p12.3CV:PGCnp
PMID:cooccur
5893RAD52-RAD52 homolog, DNA repair protein12p13-p12.2CV:PGCnp
928CD9BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29CD9 molecule12p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
51347TAOK3DPK | JIK | MAP3K18TAO kinase 312qCV:PGCnp
4035LRP1A2MR | APOER | APR | CD91 | IGFBP3R | LRP | LRP1A | TGFBR5LDL receptor related protein 112q13.3CV:PGCnp
DNM:Girard_2011
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5908RAP1BK-REV | RAL1BRAP1B, member of RAS oncogene family12q14CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
23011RAB21-RAB21, member RAS oncogene family12q21.1CV:PGCnp
DMG:Nishioka_2013
INTRACELLULAR TRAFFICKING
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
1407CRY1PHLL1cryptochrome circadian clock 112q23-q24.1CV:PGCnp
PMID:cooccur
4801NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y subunit beta12q23.3CV:PGCnp
DMG:Jaffe_2016
10154PLXNC1CD232 | PLXN-C1 | VESPRplexin C112q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5781PTPN11BPTP3 | CFC | JMML | METCDS | NS1 | PTP-1D | PTP2C | SH-PTP2 | SH-PTP3 | SHP2protein tyrosine phosphatase, non-receptor type 1112q24CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
488ATP2A2ATP2B | DAR | DD | SERCA2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 212q24.11CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
605BCL7ABCL7B-cell CLL/lymphoma 7A12q24.13CV:PGCnp
Expression
4939OAS2-2'-5'-oligoadenylate synthetase 212q24.2CV:GWASdb
CV:PGCnp
4842NOS1IHPS1 | N-NOS | NC-NOS | NOS | bNOS | nNOSnitric oxide synthase 112q24.22Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
6249CLIP1CLIP | CLIP-170 | CLIP170 | CYLN1 | RSNCAP-Gly domain containing linker protein 112q24.3CV:PGCnp
DMG:Wockner_2014
8099CDK2AP1DOC1 | DORC1 | ST19 | doc-1 | p12DOC-1cyclin-dependent kinase 2 associated protein 112q24.31CV:PGCnp
LK:YES
PMID:cooccur
23047PDS5BAPRIN | AS3 | CG008PDS5 cohesin associated factor B13q12.3CV:PGCnpCompositeSet
Darnell FMRP targets
8803SUCLA2A-BETA | MTDPS5 | SCS-betaAsuccinate-CoA ligase, ADP-forming, beta subunit13q14.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
1102RCBTB2CHC1L | RLGRCC1 and BTB domain containing protein 213q14.3CV:PGCnp
79758DHRS12SDR40C1dehydrogenase/reductase (SDR family) member 1213q14.3DMG:Wockner_2014
23077MYCBP2Myc-bp2 | PAM | PhrMYC binding protein 2, E3 ubiquitin protein ligase13q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
10464PIBF1C13orf24 | CEP90 | PIBFprogesterone immunomodulatory binding factor 113q22.1CV:PGCnp
22894DIS32810028N01Rik | EXOSC11 | KIAA1008 | RRP44 | dis3pDIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease13q22.1CV:PGCnp
7174TPP2TPP-2 | TPPIItripeptidyl peptidase II13q32-q33CV:PGCnp
GO_Annotation
Ascano FMRP targets
1284COL4A2ICH | POREN2collagen type IV alpha 213q34CV:GWAScat
CV:GWASdb
CV:PGCnp
10278EFSCAS3 | CASS3 | EFS1 | EFS2 | HEFS | SINembryonal Fyn-associated substrate14q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
171546SPTSSAC14orf147 | SSSPTAserine palmitoyltransferase small subunit A14q13.1CV:GWASdb
CV:PGCnp
6729SRP54-signal recognition particle 54kDa14q13.2CV:PGCnp
DMG:Jaffe_2016
6655SOS2NS9SOS Ras/Rho guanine nucleotide exchange factor 214q21CV:PGCnp
DNM:Gulsuner_2013
4247MGAT2CDG2A | CDGS2 | GLCNACTII | GNT-II | GNT2mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase14q21CV:PGCnp
6617SNAPC1PTFgamma | SNAP43small nuclear RNA activating complex polypeptide 114q22CV:PGCnp
DMG:Jaffe_2016
114088TRIM9RNF91 | SPRINGtripartite motif containing 914q22.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
3895KTN1CG1 | KNT | MU-RMS-40.19kinectin 114q22.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10668CGRRF1CGR19 | RNF197cell growth regulator with ring finger domain 114q22.2CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
2764GMFBGMFglia maturation factor beta14q22.2CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
5684PSMA3HC8 | PSC3proteasome subunit alpha 314q23CV:PGCnp
Network
5494PPM1APP2C-ALPHA | PP2CA | PP2Calphaprotein phosphatase, Mg2+/Mn2+ dependent 1A14q23.1CV:PGCnp
Network
5926ARID4ARBBP-1 | RBBP1 | RBP-1 | RBP1AT-rich interaction domain 4A14q23.1CV:PGCnp
22890ZBTB1ZNF909zinc finger and BTB domain containing 114q23.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
2079ERHDROERenhancer of rudimentary homolog (Drosophila)14q24.1DMG:Nishioka_2013
9517SPTLC2HSN1C | LCB2 | LCB2A | NSAN1C | SPT2 | hLCB2aserine palmitoyltransferase long chain base subunit 214q24.3CV:PGCnp
Expression
PMID:cooccur
Ascano FMRP targets
801CALM1CALML2 | CAMI | CPVT4 | DD132 | LQT14 | PHKD | caMcalmodulin 1 (phosphorylase kinase, delta)14q32.11ADT:Sun_2012
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_mGluR5
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7453WARSGAMMA-2 | IFI53 | IFP53tryptophanyl-tRNA synthetase14q32.31DNM:Fromer_2014
PMID:cooccur
CompositeSet
1983EIF5EIF-5 | EIF-5Aeukaryotic translation initiation factor 514q32.32CV:PGCnp
DNM:Girard_2011
Expression
CompositeSet
9556C14orf2MP68 | PLPMchromosome 14 open reading frame 214q32.33CV:PGCnp
81614NIPA2-non imprinted in Prader-Willi/Angelman syndrome 215q11.2CV:PGCnp
Expression
PMID:cooccur
7337UBE3AANCR | AS | E6-AP | EPVE6AP | HPVE6Aubiquitin protein ligase E3A15q11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
10125RASGRP1CALDAG-GEFI | CALDAG-GEFII | RASGRP | V | hRasGRP1RAS guanyl releasing protein 115q14CV:GWASdb
CV:PGCnp
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
2038EPB42PA | SPH5erythrocyte membrane protein band 4.215q15-q21CV:PGCnp
Network
9728SECISBP2LSBP2L | SLANSECIS binding protein 2 like15q21.1CV:PGCnpCompositeSet
Darnell FMRP targets
23312DMXL2PEPNS | RC3Dmx like 215q21.2CV:PGCnp
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
CompositeSet
Darnell FMRP targets
102ADAM10AD10 | AD18 | CD156c | CDw156 | HsT18717 | MADM | RAK | kuzADAM metallopeptidase domain 1015q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
27020NPTNGP55 | GP65 | SDFR1 | SDR1 | np55 | np65neuroplastin15q22CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5607MAP2K5HsT17454 | MAPKK5 | MEK5 | PRKMK5mitogen-activated protein kinase kinase 515q23CV:PGCnp
5685PSMA4HC9 | HsT17706 | PSC9proteasome subunit alpha 415q25.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
23478SEC11A1810012E07Rik | SEC11L1 | SPC18 | SPCS4A | sid2895SEC11 homolog A, signal peptidase complex subunit15q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
4205MEF2AADCAD1 | RSRFC4 | RSRFC9 | mef2myocyte enhancer factor 2A15q26CV:PGCnp
PMID:cooccur
253982ASPHD1-aspartate beta-hydroxylase domain containing 116p11.2CNV:YES
GSMA_IIE
6911TBX6SCDO5T-box 616p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
7385UQCRC2MC3DN5 | QCR2 | UQCR2ubiquinol-cytochrome c reductase core protein II16p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
18ABATGABA-AT | GABAT | NPD0094-aminobutyrate aminotransferase16p13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
6755SSTR5SS-5-Rsomatostatin receptor 516p13.3PMID:cooccur
1387CREBBPCBP | KAT3A | RSTSCREB binding protein16p13.3CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
51172NAGPAAPAA | UCEN-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase16p13.3DMG:Wockner_2014
79068FTOALKBH9 | BMIQ14 | GDFDfat mass and obesity associated16q12.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5934RBL2P130 | Rb2retinoblastoma-like 216q12.2CV:PGCnp
1006CDH8Nbla04261cadherin 816q22.1CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
80777CYB5BCYB5-M | CYPB5M | OMB5cytochrome b5 type B (outer mitochondrial membrane)16q22.1CV:PGCnpG2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
5713PSMD7MOV34 | P40 | Rpn8 | S12proteasome 26S subunit, non-ATPase 716q22.3CV:PGCnp
DMG:Wockner_2014
654780SFPQ-splicing factor proline/glutamine-rich16q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
81631MAP1LC3BATG8F | LC3B | MAP1A/1BLC3 | MAP1LC3B-amicrotubule associated protein 1 light chain 3 beta16q24.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5636PRPSAP2PAP41phosphoribosyl pyrophosphate synthetase-associated protein 217p11.2-p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
8522GAS7MLL/GAS7growth arrest specific 717p13.1CV:PGCnp
DMG:Montano_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
7326UBE2G1E217K | UBC7 | UBE2Gubiquitin conjugating enzyme E2 G117p13.2CV:PGCnp
5048PAFAH1B1LIS1 | LIS2 | MDCR | MDS | PAFAHplatelet activating factor acetylhydrolase 1b regulatory subunit 117p13.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
23531MMDMMA | MMD1 | PAQR11monocyte to macrophage differentiation-associated17qCV:PGCnp
PMID:cooccur
9527GOSR1GOLIM2 | GOS-28 | GOS28 | GOS28/P28 | GS28 | P28golgi SNAP receptor complex member 117q11CV:PGCnp
GO_Annotation
7067THRAAR7 | CHNG6 | EAR7 | ERB-T-1 | ERBA | ERBA1 | NR1A1 | THRA1 | THRA2 | c-ERBA-1thyroid hormone receptor, alpha17q11.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
7756ZNF207BuGZ | hBuGZzinc finger protein 20717q11.2CV:PGCnp
23512SUZ12CHET9 | JJAZ1SUZ12 polycomb repressive complex 2 subunit17q11.2CV:PGCnp
DMG:Nishioka_2013
Chromatin Remodeling Genes
8557TCAPCMD1N | CMH25 | LGMD2G | T-cap | TELE | telethonintitin-cap17q12CV:PGCnp
Network
1267CNPCNP12',3'-cyclic nucleotide 3' phosphodiesterase17q21Association
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
1655DDX5G17P1 | HLR1 | HUMP68 | p68DEAD-box helicase 517q21CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
8678BECN1ATG6 | VPS30 | beclin1beclin 1, autophagy related17q21CV:PGCnp
Expression
PMID:cooccur
6605SMARCE1BAF57SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 117q21.2CV:PGCnp
Network
PMID:cooccur
Chromatin Remodeling Genes
4836NMT1NMTN-myristoyltransferase 117q21.31CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
Ascano FMRP targets
10951CBX1CBX | HP1-BETA | HP1Hs-beta | HP1Hsbeta | M31 | MOD1 | p25betachromobox 117q21.32CV:PGCnp
8161COILCLN80 | p80-coilincoilin17q22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
1534CYB561CYB561A1 | FRRS2cytochrome b56117q23.3CV:PGCnp
DMG:Wockner_2014
5573PRKAR1AACRDYS1 | ADOHR | CAR | CNC | CNC1 | PKR1 | PPNAD1 | PRKAR1 | TSE1protein kinase cAMP-dependent type I regulatory subunit alpha17q24.2CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
65258MPPE1PGAP5metallophosphoesterase 118p11.21CV:PGCnp
DMG:Nishioka_2013
10928RALBP1RIP1 | RLIP1 | RLIP76ralA binding protein 118p11.3CV:PGCnp
DMG:Jaffe_2016
8780RIOK3SUDDRIO kinase 318q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
8932MBD2DMTase | NY-CO-41methyl-CpG binding domain protein 218q21CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
23335WDR7TRAGWD repeat domain 718q21.31CV:PGCnp
CV:PheWAS
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
3949LDLRFH | FHC | LDLCQ2low density lipoprotein receptor19p13.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
8943AP3D1ADTD | hBLVRadaptor related protein complex 3 delta 1 subunit19p13.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
3643INSRCD220 | HHF5insulin receptor19p13.3-p13.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Ascano FMRP targets
1954MEGF8C19orf49 | CRPT2 | EGFL4 | SBP1multiple EGF like domains 819q12CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
26065LSM14AC19orf13 | FAM61A | RAP55 | RAP55ALSM14A mRNA processing body assembly factor19q13.11CV:PGCnp
26330GAPDHSGAPD2 | GAPDH-2 | GAPDS | HEL-S-278 | HSD-35glyceraldehyde-3-phosphate dehydrogenase, spermatogenic19q13.12DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
4059BCAMAU | CD239 | LU | MSK19basal cell adhesion molecule (Lutheran blood group)19q13.2DMG:Wockner_2014
808CALM3HEL-S-72 | PHKD | PHKD3calmodulin 3 (phosphorylase kinase, delta)19q13.2-q13.3CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
11006LILRB4CD85K | ILT-3 | ILT3 | LIR-5 | LIR5leukocyte immunoglobulin like receptor B419q13.4CV:GWASdb
CV:PGCnp
7137TNNI3CMD1FF | CMD2A | CMH7 | RCM1 | TNNC1 | cTnItroponin I3, cardiac type19q13.4CV:PGCnp
GO_Annotation
26227PHGDH3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERAphosphoglycerate dehydrogenase1p12CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
204851HIPK1Myak | Nbak2homeodomain interacting protein kinase 11p13.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
829CAPZA1CAPPA1 | CAPZ | CAZ1capping actin protein of muscle Z-line alpha subunit 11p13.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5906RAP1AC21KG | G-22K | KREV-1 | KREV1 | RAP1 | SMGP21RAP1A, member of RAS oncogene family1p13.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6814STXBP3MUNC18-3 | MUNC18C | PSP | UNC-18Csyntaxin binding protein 31p13.3DMG:Jaffe_2016CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
25950RWDD3RSUMERWD domain containing 31p21.3CV:PGCnp
DMG:Wockner_2014
7813EVI5EVI-5 | NB4Secotropic viral integration site 51p22.1CV:GWASdb
CV:PGCnp
11146GLMNFAP | FAP48 | FAP68 | FKBPAP | GLML | GVM | VMGLOMglomulin, FKBP associated protein1p22.1CV:PGCnp
34ACADMACAD1 | MCAD | MCADHacyl-CoA dehydrogenase, C-4 to C-12 straight chain1p31CV:PGCnp
GSMA_IIA
26135SERBP1CGI-55 | CHD3IP | HABP4L | PAI-RBP1 | PAIRBP1SERPINE1 mRNA binding protein 11p31CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
9403SEP15-15 kDa selenoprotein1p31CV:PGCnp
DMG:Wockner_2014
5567PRKACBPKA C-beta | PKACBprotein kinase cAMP-activated catalytic subunit beta1p31.1CV:PGCnp
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1491CTH-cystathionine gamma-lyase1p31.1CV:GWAScat
CV:PGCnp
GSMA_IIA
PMID:cooccur
26994RNF11CGI-123 | SID1669ring finger protein 111p32CV:GWASdb
CV:PGCnp
Network
6342SCP2NLTP | NSL-TP | SCP-2 | SCP-CHI | SCP-X | SCPXsterol carrier protein 21p32CV:PGCnp
DMG:Wockner_2014
4116MAGOHMAGOH1 | MAGOHAmago homolog, exon junction complex core component1p32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
3061HCRTR1OX1Rhypocretin receptor 11p33CV:PGCnp
GO_Annotation
PMID:cooccur
8503PIK3R3p55 | p55-GAMMA | p55PIKphosphoinositide-3-kinase regulatory subunit 31p34.1CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
9682KDM4AJHDM3A | JMJD2 | JMJD2A | TDRD14Alysine demethylase 4A1p34.1CV:GWAScat
CV:PGC128
CV:PGCnp
Ascano FMRP targets
Chromatin Remodeling Genes
6421SFPQPOMP100 | PPP1R140 | PSFsplicing factor proline/glutamine-rich1p34.3CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
3208HPCABDR2 | DYT2hippocalcin1p35-p34.2CV:PGCnp
DNM:Guipponi_2014
INTRACELLULAR SIGNAL TRANSDUCTION
Potential synaptic genes
23673STX12STX13 | STX14syntaxin 121p35.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
5511PPP1R8ARD-1 | ARD1 | NIPP-1 | NIPP1 | PRO2047protein phosphatase 1 regulatory subunit 81p35.3CV:PGCnp
DMG:Wockner_2014
1870E2F2E2F-2E2F transcription factor 21p36CV:GWASdb
DMG:Wockner_2014
10250SRRM1160-KD | POP101 | SRM160serine and arginine repetitive matrix 11p36.11CV:PGCnp
DMG:Jaffe_2016
10236HNRNPRHNRPR | hnRNP-Rheterogeneous nuclear ribonucleoprotein R1p36.12CV:PGCnp
DMG:Jaffe_2016
8672EIF4G3eIF-4G 3 | eIF4G 3 | eIF4GIIeukaryotic translation initiation factor 4 gamma 31p36.12CV:GWAScat
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5226PGD6PGDphosphogluconate dehydrogenase1p36.22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
5174PDZK1CAP70 | CLAMP | NHERF-3 | NHERF3 | PDZD1PDZ domain containing 11q21CNV:YES
CV:GWAScat
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
4807NHLH1HEN1 | NSCL | NSCL1 | bHLHa35nescient helix-loop-helix 11q22CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
4332MNDAPYHIN3myeloid cell nuclear differentiation antigen1q22CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
2212FCGR2ACD32 | CD32A | CDw32 | FCG2 | FCGR2 | FCGR2A1 | FcGR | IGFR2Fc fragment of IgG receptor IIa1q23CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIA
5824PEX19D1S2223E | HK33 | PBD12A | PMP1 | PMPI | PXF | PXMP1peroxisomal biogenesis factor 191q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
5999RGS4RGP4 | SCZD9regulator of G-protein signaling 41q23.3Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
GSMA_IIA
Network
PMID:cooccur
Potential synaptic genes
27101CACYBPGIG5 | PNAS-107 | S100A6BP | SIPcalcyclin binding protein1q24-q25CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
26092TOR1AIP1LAP1 | LAP1Btorsin 1A interacting protein 11q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
777CACNA1EBII | CACH6 | CACNL1A6 | Cav2.3calcium voltage-gated channel subunit alpha1 E1q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2752GLULGLNS | GS | PIG43 | PIG59glutamate-ammonia ligase1q31CV:PGCnp
Expression
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5321PLA2G4APLA2G4 | cPLA2 | cPLA2-alphaphospholipase A2 group IVA1q31.1Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
140609NEK7-NIMA related kinase 71q31.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
1604CD55CR | CROM | DAF | TCCD55 molecule (Cromer blood group)1q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
5287PIK3C2BC2-PI3Kphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta1q32CV:PGCnp
DNM:Fromer_2014
CompositeSet
8444DYRK3DYRK5 | RED | REDK | hYAK3-2dual specificity tyrosine phosphorylation regulated kinase 31q32.1CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
23380SRGAP2ARHGAP34 | FNBP2 | SRGAP2A | SRGAP3SLIT-ROBO Rho GTPase activating protein 21q32.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5877RABIFMSS4 | RASGFR3 | RASGRF3RAB interacting factor1q32.1DMG:Jaffe_2016INTRACELLULAR TRAFFICKING
8564KMOdJ317G22.1kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)1q42-q44Association
CV:PGCnp
DNM:Guipponi_2014
Expression
GR_Ng
PMID:cooccur
7257TSNAXTRAXtranslin-associated factor X1q42.1Association
DNM:Fromer_2014
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
6726SRP9ALURBPsignal recognition particle 9kDa1q42.12CV:PGCnp
DMG:Nishioka_2013
23029RBM34-RNA binding motif protein 341q42.3DMG:Jaffe_2016
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
6629SNRPB2Msl1small nuclear ribonucleoprotein polypeptide B20p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
182JAG1AGS | AHD | AWS | CD339 | HJ1 | JAGL1jagged 120p12.1-p11.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
PMID:cooccur
Ascano FMRP targets
11237RNF24G1Lring finger protein 2420p13CV:PGCnp
140885SIRPABIT | CD172A | MFR | MYD-1 | P84 | PTPNS1 | SHPS1 | SIRPsignal regulatory protein alpha20p13CV:PGCnp
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
8894EIF2S2EIF2 | EIF2B | EIF2beta | PPP1R67 | eIF-2-betaeukaryotic translation initiation factor 2 subunit beta20q11.2CV:PGCnp
Network
Ascano FMRP targets
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
6185RPN2RIBIIR | RPN-II | RPNII | SWP1ribophorin II20q12-q13.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
10955SERINC3AIGP1 | DIFF33 | SBBI99 | TDE | TDE1 | TMS-1serine incorporator 320q13.12DMG:Jaffe_2016
6227RPS21HLDF | S21ribosomal protein S2120q13.3CV:PGCnp
DMG:Nishioka_2013
6782HSPA13STCHheat shock protein family A (Hsp70) member 1321q11CV:PGCnp
10950BTG3ANA | TOB5 | TOB55 | TOFABTG family member 321q21.1CV:PGCnp
DMG:Jaffe_2016
571BACH1BACH-1 | BTBD24BTB and CNC homology 1, basic leucine zipper transcription factor 121q22.11CV:PGCnp
DMG:Jaffe_2016
23515MORC3NXP2 | ZCW5 | ZCWCC3MORC family CW-type zinc finger 321q22.13CV:PGCnp
1859DYRK1ADYRK | DYRK1 | HP86 | MNB | MNBH | MRD7dual specificity tyrosine phosphorylation regulated kinase 1A21q22.13CV:PGCnp
GO_Annotation
10311DSCR3DCRA | DSCRADSCR3 arrestin fold containing21q22.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3150HMGN1HMG14high mobility group nucleosome binding domain 121q22.2CV:PGCnp
2114ETS2ETS2IT1ETS proto-oncogene 2, transcription factor21q22.2CV:PGCnp
DEG:Zhao_2015
9980DOPEY221orf5 | C21orf5dopey family member 221q22.2CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
468ATF4CREB-2 | CREB2 | TAXREB67 | TXREBactivating transcription factor 422q13.1CV:PGCnp
PMID:cooccur
2033EP300KAT3B | RSTS2 | p300E1A binding protein p30022q13.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
6942TCF20AR1 | SPBP | TCF-20transcription factor 20 (AR1)22q13.3|22q13.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
8446DUSP11PIR1dual specificity phosphatase 112p13.1CV:PGCnp
4190MDH1HEL-S-32 | MDH-s | MDHA | MGC:1375 | MOR2malate dehydrogenase 12p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CELL METABOLISM
CompositeSet
9792SERTAD2Sei-2 | TRIP-Br2SERTA domain containing 22p14CV:PGCnp
DMG:Jaffe_2016
10097ACTR2ARP2ARP2 actin-related protein 2 homolog (yeast)2p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
23177CEP68KIAA0582centrosomal protein 68kDa2p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
98ACYP2ACYM | ACYPacylphosphatase 22p16.2CV:GWASdb
CV:PGCnp
57142RTN4ASY | NI220/250 | NOGO | NOGO-A | NOGOC | NSP | NSP-CL | Nbla00271 | Nbla10545 | Nogo-B | Nogo-C | RTN-X | RTN4-A | RTN4-B1 | RTN4-B2 | RTN4-Creticulon 42p16.3Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_WM
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51232CRIM1CRIM-1 | S52cysteine rich transmembrane BMP regulator 1 (chordin-like)2p21CV:PGCnp
GO_Annotation
90411MCFD2F5F8D | F5F8D2 | LMAN1IP | SDNSFmultiple coagulation factor deficiency 22p21CV:PGCnp
DMG:Nishioka_2013
9553MRPL33C2orf1 | L33mt | MRP-L33 | RPL33Lmitochondrial ribosomal protein L332p21CV:PGCnp
805CALM2CAMII | LQT15 | PHKD | PHKD2 | caMcalmodulin 2 (phosphorylase kinase, delta)2p21CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
5610EIF2AK2EIF2AK1 | PKR | PPP1R83 | PRKReukaryotic translation initiation factor 2 alpha kinase 22p22-p21CV:PGCnp
PMID:cooccur
25797QPCTGCT | QC | sQCglutaminyl-peptide cyclotransferase2p22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
50618ITSN2PRO2015 | SH3D1B | SH3P18 | SWA | SWAPintersectin 22p23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
11321GPN1ATPBD1A | MBDIN | NTPBP | RPAP4 | XAB1GPN-loop GTPase 12p23.3CV:GWASdb
CV:PGCnp
57498KIDINS220ARMSkinase D-interacting substrate 220kDa2p24CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
54454ATAD2B-ATPase family, AAA domain containing 2B2p24.1-p23.3CV:PGCnp
6868ADAM17ADAM18 | CD156B | CSVP | NISBD | NISBD1 | TACEADAM metallopeptidase domain 172p25CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
10971YWHAQ14-3-3 | 1C5 | HS1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta2p25.1CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9781RNF144ARNF144 | UBCE7IP4ring finger protein 144A2p25.2CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
91543RSAD22510004L01Rik | cig33 | cig5 | vig1radical S-adenosyl methionine domain containing 22p25.2CV:PGCnp
10190TXNDC9APACD | PHLP3thioredoxin domain containing 92q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
GSMA_I
56910STARD7GTT1StAR related lipid transfer domain containing 72q11.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
23020SNRNP200ASCC3L1 | BRR2 | HELIC2 | RP33 | U5-200KDsmall nuclear ribonucleoprotein U5 subunit 2002q11.2CV:PGCnp
Network
Ascano FMRP targets
23518R3HDM1R3HDMR3H domain containing 12q21.3DMG:Nishioka_2013
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
9839ZEB2HSPC082 | SIP-1 | SIP1 | SMADIP1 | ZFHX1Bzinc finger E-box binding homeobox 22q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
9111NMI-N-myc and STAT interactor2q23CV:PGCnp
GSMA_IIA
PMID:cooccur
4065LY75CD205 | CLEC13B | DEC-205 | GP200-MR6 | LY-75lymphocyte antigen 752q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
8502PKP4p0071plakophilin 42q24.1CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
64844MARCH7AXO | AXOT | MARCH-VII | RNF177membrane associated ring-CH-type finger 72q24.2CV:PGCnp
GSMA_IIA
9541CIR1CIRcorepressor interacting with RBPJ, 12q31.1CV:PGCnp
8520HAT1KAT1histone acetyltransferase 12q31.2-q33.1CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
1386ATF2CRE-BP1 | CREB-2 | CREB2 | HB16 | TREB7activating transcription factor 22q32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6772STAT1CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91signal transducer and activator of transcription 12q32.2CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
23451SF3B1Hsh155 | MDS | PRP10 | PRPF10 | SAP155 | SF3b155splicing factor 3b subunit 12q33.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
Ascano FMRP targets
1933EEF1B2EEF1B | EEF1B1 | EF1Beukaryotic translation elongation factor 1 beta 22q33.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
Network
1593CYP27A1CP27 | CTX | CYP27cytochrome P450 family 27 subfamily A member 12q35GSMA_IIA
GSMA_IIE
PMID:cooccur
5757PTMATMSAprothymosin, alpha2q37.1CV:PGCnp
DMG:Jaffe_2016
10920COPS8COP9 | CSN8 | SGN8COP9 signalosome subunit 82q37.3CV:PGCnp
DMG:Nishioka_2013
23429RYBPAAP1 | APAP-1 | DEDAF | YEAF1RING1 and YY1 binding protein3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
9861PSMD6Rpn7 | S10 | SGA-113M | p42A | p44S10proteasome 26S subunit, non-ATPase 63p14.1CV:PGCnp
Network
9039UBA3NAE2 | UBE1C | hUBA3ubiquitin like modifier activating enzyme 33p14.1CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
23272FAM208AC3orf63 | RAP140 | se89-1family with sequence similarity 208 member A3p14.3CV:PGCnp
5793PTPRGHPTPG | PTPG | R-PTP-GAMMA | RPTPGprotein tyrosine phosphatase, receptor type G3p21-p14CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
DNM:Kranz_2015
PMID:cooccur
TYROSINE KINASE SIGNALING
CompositeSet
Darnell FMRP targets
3697ITIH1H1P | IATIH | IGHEP1 | ITI-HC1 | ITIH | SHAPinter-alpha-trypsin inhibitor heavy chain 13p21.1CV:GWAScat
CV:GWASdb
CV:PGCnp
LK:YES
PMID:cooccur
4615MYD88MYD88Dmyeloid differentiation primary response 883p22CV:PGCnp
GSMA_I
PMID:cooccur
2803GOLGA4CRPF46 | GCP2 | GOLG | MU-RMS-40.18 | p230golgin A43p22-p21.3CV:PGCnp
GSMA_I
885CCK-cholecystokinin3p22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
23122CLASP2-cytoplasmic linker associated protein 23p22.3CV:PGCnp
GSMA_I
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
7155TOP2BTOPIIB | top2betatopoisomerase (DNA) II beta3p24CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
5868RAB5ARAB5RAB5A, member RAS oncogene family3p24.3CV:PGCnp
GSMA_I
Network
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
23228PLCL2PLCE2phospholipase C like 23p24.3CV:PGCnp
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
7476WNT7A-wingless-type MMTV integration site family member 7A3p25CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
8997KALRNARHGEF24 | CHD5 | CHDS5 | DUET | DUO | HAPIP | TRADkalirin, RhoGEF kinase3q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8930MBD4MED1methyl-CpG binding domain 4 DNA glycosylase3q21.3PMID:cooccurChromatin Remodeling Genes
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
4154MBNL1EXP | MBNLmuscleblind like splicing regulator 13q25CV:PGCnp
GO_Annotation
PMID:cooccur
5918RARRES1LXNL | PERG-1 | TIG1retinoic acid receptor responder (tazarotene induced) 13q25.32CV:PGCnp
DMG:Wockner_2014
11235PDCD10CCM3 | TFAR15programmed cell death 103q26.1CV:PGCnp
7881KCNAB1AKR6A3 | KCNA1B | KV-BETA-1 | Kvb1.3 | hKvBeta3 | hKvb3potassium voltage-gated channel subfamily A member regulatory beta subunit 13q26.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
EXCITABILITY
7095SEC62Dtrp1 | HTP1 | TLOC1 | TP-1SEC62 homolog, preprotein translocation factor3q26.2CV:PGCnp
6434TRA2BHtra2-beta | PPP1R156 | SFRS10 | SRFS10 | TRA2-BETA | TRAN2Btransformer 2 beta homolog (Drosophila)3q26.2-q27CV:PGCnp
23200ATP11BATPIF | ATPIRATPase phospholipid transporting 11B (putative)3q27CV:PGCnp
DMG:Jaffe_2016
5504PPP1R2IPP-2 | IPP2protein phosphatase 1 regulatory inhibitor subunit 23q29CV:PGCnp
PMID:cooccur
22916NCBP2CBC2 | CBP20 | NIP1 | PIG55nuclear cap binding protein subunit 23q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
5062PAK2PAK65 | PAKgammap21 protein (Cdc42/Rac)-activated kinase 23q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
116984ARAP2CENTD1 | PARXArfGAP with RhoGAP domain, ankyrin repeat and PH domain 24p14CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
23216TBC1D1TBC | TBC1TBC1 domain family member 14p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
23231SEL1L3Sel-1L3SEL1L family member 34p15.2CV:PGCnp
CV:PheWAS
2044EPHA5CEK7 | EHK-1 | EHK1 | EK7 | HEK7 | TYRO4EPH receptor A54q13.1CV:PGCnp
CV:PheWAS
91746YTHDC1YT521 | YT521-BYTH domain containing 14q13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
5783PTPN13FAP-1 | PNP1 | PTP-BAS | PTP-BL | PTP1E | PTPL1 | PTPLE | hPTP1Eprotein tyrosine phosphatase, non-receptor type 134q21.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
128ADH5ADH-3 | ADHX | FALDH | FDH | GSH-FDH | GSNOR | HEL-S-60palcohol dehydrogenase 5 (class III), chi polypeptide4q23PMID:cooccur
130ADH6ADH-5alcohol dehydrogenase 6 (class V)4q23PMID:cooccur
4126MANBAMANB1mannosidase beta4q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
5530PPP3CACALN | CALNA | CALNA1 | CCN1 | CNA1 | PPP2Bprotein phosphatase 3 catalytic subunit alpha4q24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
64116SLC39A8BIGM103 | CDG2N | LZT-Hs6 | PP3105 | ZIP8solute carrier family 39 member 84q24CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
51176LEF1LEF-1 | TCF10 | TCF1ALPHA | TCF7L3lymphoid enhancer binding factor 14q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
9871SEC24DCLCRP2SEC24 homolog D, COPII coat complex component4q26CV:PGCnp
DMG:Jaffe_2016
4086SMAD1BSP-1 | BSP1 | JV4-1 | JV41 | MADH1 | MADR1SMAD family member 14q31CV:PGCnp
GO_Annotation
8467SMARCA5ISWI | SNF2H | WCRF135 | hISWI | hSNF2HSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 54q31.1-q31.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
84869CBR4SDR45C1carbonyl reductase 44q32.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
2823GPM6AGPM6 | M6Aglycoprotein M6A4q34CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10605PAIP1-poly(A) binding protein interacting protein 15p12CV:PGCnp
10016PDCD6ALG-2 | ALG2 | PEF1Bprogrammed cell death 65p15.33CV:PGCnp
DMG:Wockner_2014
Network
1022CDK7CAK1 | CDKN7 | HCAK | MO15 | STK1 | p39MO15cyclin-dependent kinase 75q12.1GO_Annotation
3074HEXBENC-1AS | HEL-248 | HEL-S-111hexosaminidase subunit beta5q13CV:PGCnp
GO_Annotation
PMID:cooccur
3156HMGCRLDLCQ33-hydroxy-3-methylglutaryl-CoA reductase5q13.3-q14CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
9765ZFYVE16PPP1R69zinc finger FYVE-type containing 165q14CV:PGCnp
DMG:Jaffe_2016
10085EDIL3DEL1EGF like repeats and discoidin domains 35q14CV:GWASdb
CV:PGCnp
256987SERINC5C5orf12 | TPO1serine incorporator 55q14.1CV:PGCnp
GO_Annotation
6902TBCA-tubulin folding cofactor A5q14.1CV:PGCnp
DMG:Jaffe_2016
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
23262PPIP5K2CFAP160 | HISPPD1 | IP7K2 | VIP2diphosphoinositol pentakisphosphate kinase 25q21.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9867PJA2Neurodap1 | RNF131praja ring finger ubiquitin ligase 25q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
CompositeSet
Darnell FMRP targets
1657DMXL1-Dmx like 15q22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
5229PGGT1BBGGI | GGTIprotein geranylgeranyltransferase type I subunit beta5q22.3CV:PGCnp
10949HNRNPA0HNRPA0heterogeneous nuclear ribonucleoprotein A05q31CV:PGCnp
GSMA_I
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6500SKP1EMC19 | OCP-II | OCP2 | SKP1A | TCEB1L | p19AS-phase kinase-associated protein 15q31DMG:Wockner_2014
Expression
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
4695NDUFA2B8 | CD14 | CIB8NADH:ubiquinone oxidoreductase subunit A25q31.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
3550IKCSA2 | REDIK cytokine, down-regulator of HLA II5q31.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
Ascano FMRP targets
9685CLINT1CLINT | ENTH | EPN4 | EPNRclathrin interactor 15q33.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
8728ADAM19FKSG34 | MADDAM | MLTNBADAM metallopeptidase domain 195q33.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
821CANXCNX | IP90 | P90calnexin5q35CV:PGCnp
DNM:Xu_2012
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
CompositeSet
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
1794DOCK2IMD40dedicator of cytokinesis 25q35.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
7422VEGFAMVCD1 | VEGF | VPFvascular endothelial growth factor A6p12CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
23607CD2APCMSCD2-associated protein6p12CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
81578COL21A1COLA1L | FP633collagen type XXI alpha 16p12.3-p11.2|6p12.3-p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
9753ZSCAN12ZFP96 | ZNF29K1 | ZNF305 | ZNF96 | dJ29K1.2zinc finger and SCAN domain containing 126p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
860RUNX2AML3 | CBF-alpha-1 | CBFA1 | CCD | CCD1 | CLCD | OSF-2 | OSF2 | PEA2aA | PEBP2aArunt related transcription factor 26p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
6903TBCCCFCtubulin folding cofactor C6p21.1CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIE
23304UBR2C6orf133 | bA49A4.1 | dJ242G1.1 | dJ392M17.3ubiquitin protein ligase E3 component n-recognin 26p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
10473HMGN4HMG17L3 | NHChigh mobility group nucleosomal binding domain 46p21.3CV:PGCnp
GSMA_I
4277MICBPERB11.2MHC class I polypeptide-related sequence B6p21.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_COR
GR_WM
GSMA_I
PMID:cooccur
7932OR2H2FAT11 | OLFR2 | OLFR42B | OR2H3 | dJ271M21.2 | hs6M1-12olfactory receptor family 2 subfamily H member 26p21.3CV:PGCnp
GSMA_I
2739GLO1GLOD1 | GLYI | HEL-S-74glyoxalase I6p21.3-p21.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
GSMA_IIE
PMID:cooccur
CELL METABOLISM
51567TDP2AD022 | EAP2 | EAPII | TTRAP | dJ30M3.3 | hTDP2tyrosyl-DNA phosphodiesterase 26p22.3-p22.1CV:PGCnp
GSMA_I
7020TFAP2AAP-2 | AP-2alpha | AP2TF | BOFS | TFAP2transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)6p24CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
23469PHF3-PHD finger protein 36q12CV:PGCnp
7803PTP4A1HH72 | PRL-1 | PRL1 | PTP(CAAX1) | PTPCAAX1protein tyrosine phosphatase type IVA, member 16q12CV:GWASdb
CV:PGCnp
9324HMGN3PNAS-24 | PNAS-25 | TRIP7high mobility group nucleosomal binding domain 36q14.1CV:PGCnp
DMG:Wockner_2014
51465UBE2J1CGI-76 | HSPC153 | HSPC205 | HSU93243 | NCUBE-1 | NCUBE1 | UBC6 | UBC6E | Ubc6pubiquitin conjugating enzyme E2 J16q15CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
11231SEC63DNAJC23 | ERdj2 | PRO2507 | SEC63LSEC63 homolog, protein translocation regulator6q21CV:GWAScat
CV:GWASdb
CV:PGCnp
8763CD164DFNA66 | MGC-24 | MUC-24 | endolynCD164 molecule6q21CV:PGCnp
DMG:Jaffe_2016
5980REV3LPOLZ | REV3REV3 like, DNA directed polymerase zeta catalytic subunit6q21CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
5796PTPRKR-PTP-kappaprotein tyrosine phosphatase, receptor type K6q22.2-q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4217MAP3K5ASK1 | MAPKKK5 | MEKK5mitogen-activated protein kinase kinase kinase 56q22.33CV:PGCnp
DMG:Jaffe_2016
Network
Ascano FMRP targets
9590AKAP12AKAP250 | SSeCKSA-kinase anchoring protein 126q24-q25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
9589WTAPMum2Wilms tumor 1 associated protein6q25-q27CV:PGCnp
5110PCMT1PIMTprotein-L-isoaspartate (D-aspartate) O-methyltransferase6q25.1CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
23480SEC61GSSS1Sec61 translocon gamma subunit7p11.2CV:PGCnp
DMG:Jaffe_2016
2631GBASNIPSNAP2glioblastoma amplified sequence7p12CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
CompositeSet
23242COBL-cordon-bleu WH2 repeat protein7p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
107ADCY1AC1 | DFNB44adenylate cyclase 1 (brain)7p12.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
9844ELMO1CED-12 | CED12 | ELMO-1engulfment and cell motility 17p14.1CV:PGCnp
DEG:Maycox_2009
3181HNRNPA2B1HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1heterogeneous nuclear ribonucleoprotein A2/B17p15CV:PGCnp
1687DFNA5ICERE-1deafness, autosomal dominant 57p15CV:PGC128
CV:PGCnp
8887TAX1BP1CALCOCO3 | T6BP | TXBP151Tax1 (human T-cell leukemia virus type I) binding protein 17p15CV:PGCnp
DMG:Jaffe_2016
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
29896TRA2AAWMS1 | HSU53209transformer 2 alpha homolog (Drosophila)7p15.3CV:PGCnp
DMG:Nishioka_2013
23353SUN1UNC84ASad1 and UNC84 domain containing 17p22.3CV:PGCnp
7458EIF4HWBSCR1 | WSCR1 | eIF-4Heukaryotic translation initiation factor 4H7q11.23CNV:YES
CV:PGCnp
53616ADAM22ADAM 22 | MDC2ADAM metallopeptidase domain 227q21CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
3082HGFDFNB39 | F-TCF | HGFB | HPTA | SFhepatocyte growth factor7q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
154661RUNDC3BRPIB9 | RPIP9RUN domain containing 3B7q21.12CV:PGCnp
DNM:Fromer_2014
CompositeSet
5166PDK4-pyruvate dehydrogenase kinase 47q21.3CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
Expression
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
8910SGCEDYT11 | ESGsarcoglycan epsilon7q21.3CV:PGCnp
7979SHFM1DSS1 | ECD | SEM1 | SHFD1 | SHSF1 | Shfdg1split hand/foot malformation (ectrodactyly) type 17q21.3CV:PGCnp
PMID:cooccur
5577PRKAR2BPRKAR2 | RII-BETAprotein kinase cAMP-dependent type II regulatory subunit beta7q22CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
1738DLDDLDD | DLDH | E3 | GCSL | LAD | PHE3dihydrolipoamide dehydrogenase7q31-q32CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4698NDUFA5B13 | CI-13KD-B | CI-13kB | NUFM | UQOR13NADH:ubiquinone oxidoreductase subunit A57q31.33CV:PGCnp
DMG:Nishioka_2013
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
10671DCTN6WS-3 | WS3 | p27dynactin subunit 68p12DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
11030RBPMSHERMESRNA binding protein with multiple splicing8p12CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
2961GTF2E2FE | TF2E2 | TFIIE-Bgeneral transcription factor IIE subunit 28p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
23362PSD3EFA6D | EFA6R | HCA67pleckstrin and Sec7 domain containing 38p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5533PPP3CCCALNA3 | CNA3 | PP2Bgammaprotein phosphatase 3 catalytic subunit gamma8p21.3Association
Core
CV:PGCnp
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
66036MTMR9C8orf9 | LIP-STYX | MTMR8myotubularin related protein 98p23-p22CV:GWAScat
CV:PGCnp
2222FDFT1DGPT | ERG9 | SQS | SSfarnesyl-diphosphate farnesyltransferase 18p23.1-p22CV:PGCnp
DMG:Jaffe_2016
9821RB1CC1ATG17 | CC1 | FIP200 | PPP1R131RB1 inducible coiled-coil 18q11CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
6917TCEA1GTF2S | SII | TCEA | TF2S | TFIIStranscription elongation factor A18q11.2CV:PGCnp
DMG:Jaffe_2016
6386SDCBPMDA-9 | MDA9 | ST1 | SYCL | TACIP18syndecan binding protein8q12CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
Potential synaptic genes
3574IL7IL-7interleukin 78q12-q13CV:GWASdb
CV:PGCnp
23471TRAM1PNAS8 | TRAM | TRAMPtranslocation associated membrane protein 18q13.3CV:PGCnp
DMG:Wockner_2014
4683NBNAT-V1 | AT-V2 | ATV | NBS | NBS1 | P95nibrin8q21CV:PGCnp
5828PEX2PAF1 | PBD5A | PBD5B | PMP3 | PMP35 | PXMP3 | RNF72 | ZWS3peroxisomal biogenesis factor 28q21.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
6921TCEB1SIII | eloCtranscription elongation factor B subunit 18q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23643LY96ESOP-1 | MD-2 | MD2 | ly-96lymphocyte antigen 968q21.11CV:PGCnp
DMG:vanEijk_2014
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
1666DECR1DECR | NADPH | SDR18C12,4-dienoyl-CoA reductase 1, mitochondrial8q21.3CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
8895CPNE3CPN3 | PRO1071copine 38q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
5375PMP2FABP8 | M-FABP | MP2 | P2peripheral myelin protein 28q21.3-q22.1CV:PGCnp
PMID:cooccur
7381UQCRBMC3DN3 | QCR7 | QP-C | QPC | UQBC | UQBP | UQCR6 | UQPCubiquinol-cytochrome c reductase binding protein8q22CV:PGCnp
DMG:Wockner_2014
Expression
92140MTDH3D3 | AEG-1 | AEG1 | LYRIC | LYRIC/3D3metadherin8q22.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
51582AZIN1AZI | AZIA1 | OAZI | OAZIN | ODC1Lantizyme inhibitor 18q22.3CV:PGCnp
DMG:Jaffe_2016
114ADCY8AC8 | ADCY3 | HBAC1adenylate cyclase 8 (brain)8q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
6713SQLE-squalene epoxidase8q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8667EIF3HEIF3S3 | eIF3-gamma | eIF3-p40eukaryotic translation initiation factor 3 subunit H8q24.11CV:PGCnp
Network
22882ZHX2AFR1 | RAFzinc fingers and homeoboxes 28q24.13CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
10020GNEDMRV | GLCNE | IBM2 | NM | Uae1glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase9p13.3CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
PMID:cooccur
11168PSIP1DFS70 | LEDGF | PAIP | PSIP2 | p52 | p75PC4 and SFRS1 interacting protein 19p22.3CV:PGCnp
7436VLDLRCAMRQ1 | CARMQ1 | CHRMQ1 | VLDLRCHvery low density lipoprotein receptor9p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
23137SMC5SMC5L1structural maintenance of chromosomes 59q21.12CV:PGCnp
10558SPTLC1HSAN1 | HSN1 | LBC1 | LCB1 | SPT1 | SPTIserine palmitoyltransferase long chain base subunit 19q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
2176FANCCFA3 | FAC | FACCFanconi anemia complementation group C9q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Ascano FMRP targets
7507XPAXP1 | XPACxeroderma pigmentosum, complementation group A9q22.3CV:PGCnp
DMG:Jaffe_2016
5253PHF2CENP-35 | GRC5 | JHDM1EPHD finger protein 29q22.31CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
23424TDRD7CATC4 | PCTAIRE2BP | TRAPtudor domain containing 79q22.33CV:PGCnp
DMG:Wockner_2014
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5887RAD23BHHR23B | HR23B | P58RAD23 homolog B, nucleotide excision repair protein9q31.2CV:PGCnp
DMG:Jaffe_2016
9550ATP6V1G1ATP6G | ATP6G1 | ATP6GL | ATP6J | Vma10ATPase H+ transporting V1 subunit G19q32CV:PGCnp
1955MEGF9EGFL5multiple EGF like domains 99q32-q33.3CV:PGCnp
DMG:Jaffe_2016
5537PPP6CPP6 | PP6Cprotein phosphatase 6 catalytic subunit9q33.3CV:PGCnp
DMG:Nishioka_2013
Expression
3309HSPA5BIP | GRP78 | HEL-S-89n | MIF2heat shock protein family A (Hsp70) member 59q33.3CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
27348TOR1BDQ1torsin family 1 member B9q34CV:GWASdb
CV:PGCnp
25ABL1ABL | JTK7 | bcr/abl | c-ABL | c-ABL1 | p150 | v-ablABL proto-oncogene 1, non-receptor tyrosine kinase9q34.1CV:PGCnp
Network
Ascano FMRP targets
8939FUBP3FBP3far upstream element (FUSE) binding protein 39q34.11CV:PGCnp
5730PTGDSL-PGDS | LPGDS | PDS | PGD2 | PGDS | PGDS2prostaglandin D2 synthase9q34.2-q34.3PMID:cooccur
6102RP2DELXp11.3 | NM23-H10 | NME10 | TBCCD2 | XRP2retinitis pigmentosa 2 (X-linked recessive)Xp11.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6990DYNLT3RP3 | TCTE1L | TCTEX1Ldynein light chain Tctex-type 3Xp21CV:PGCnp
DEG:Zhao_2015
Potential synaptic genes
6303SAT1DC21 | KFSD | KFSDX | SAT | SSAT | SSAT-1spermidine/spermine N1-acetyltransferase 1Xp22.1CV:PGCnp
PMID:cooccur
Potential synaptic genes
415ARSEASE | CDPX | CDPX1 | CDPXRarylsulfatase E (chondrodysplasia punctata 1)Xp22.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
8473OGTHINCUT-1 | HRNT1 | O-GLCNACO-linked N-acetylglucosamine (GlcNAc) transferaseXq13Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
Potential synaptic genes
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
5716PSMD10dJ889N15.2 | p28 | p28(GANK)proteasome 26S subunit, non-ATPase 10Xq22.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
2332FMR1FMRP | FRAXA | POF | POF1fragile X mental retardation 1Xq27.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
6736SRYSRXX1 | SRXY1 | TDF | TDYsex determining region YYp11.3PMID:cooccur