Gene Page: PIBF1
Summary ?
| GeneID | 10464 |
| Symbol | PIBF1 |
| Synonyms | C13orf24|CEP90|PIBF |
| Description | progesterone immunomodulatory binding factor 1 |
| Reference | MIM:607532|HGNC:HGNC:23352|Ensembl:ENSG00000083535|HPRD:06337|Vega:OTTHUMG00000017071 |
| Gene type | protein-coding |
| Map location | 13q22.1 |
| Pascal p-value | 0.002 |
| eGene | Cortex Frontal Cortex BA9 |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| PPAP2B | 0.88 | 0.87 |
| AQP4 | 0.87 | 0.76 |
| SSPN | 0.87 | 0.85 |
| PLOD2 | 0.85 | 0.84 |
| MTM1 | 0.85 | 0.85 |
| SNTB1 | 0.84 | 0.87 |
| PSAT1 | 0.84 | 0.82 |
| TMEM47 | 0.83 | 0.84 |
| RAB31 | 0.83 | 0.83 |
| TIMP3 | 0.83 | 0.87 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| IER5L | -0.34 | -0.29 |
| AC011491.1 | -0.33 | -0.39 |
| MPPED1 | -0.33 | -0.27 |
| C3orf54 | -0.33 | -0.35 |
| NR2C2AP | -0.32 | -0.38 |
| NEUROD6 | -0.32 | -0.29 |
| MED19 | -0.32 | -0.39 |
| COMMD3 | -0.32 | -0.40 |
| SLA | -0.31 | -0.20 |
| DACT1 | -0.31 | -0.17 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| GAUSSMANN MLL AF4 FUSION TARGETS F UP | 185 | 119 | All SZGR 2.0 genes in this pathway |
| HAMAI APOPTOSIS VIA TRAIL UP | 584 | 356 | All SZGR 2.0 genes in this pathway |
| SCHLOSSER SERUM RESPONSE DN | 712 | 443 | All SZGR 2.0 genes in this pathway |
| DACOSTA UV RESPONSE VIA ERCC3 DN | 855 | 609 | All SZGR 2.0 genes in this pathway |
| DACOSTA UV RESPONSE VIA ERCC3 COMMON DN | 483 | 336 | All SZGR 2.0 genes in this pathway |
| PUJANA BRCA1 PCC NETWORK | 1652 | 1023 | All SZGR 2.0 genes in this pathway |
| PUJANA ATM PCC NETWORK | 1442 | 892 | All SZGR 2.0 genes in this pathway |
| SHEN SMARCA2 TARGETS UP | 424 | 268 | All SZGR 2.0 genes in this pathway |
| BLALOCK ALZHEIMERS DISEASE INCIPIENT UP | 390 | 242 | All SZGR 2.0 genes in this pathway |
| BLALOCK ALZHEIMERS DISEASE UP | 1691 | 1088 | All SZGR 2.0 genes in this pathway |
| GENTILE UV LOW DOSE DN | 67 | 46 | All SZGR 2.0 genes in this pathway |
| CHEN HOXA5 TARGETS 9HR UP | 223 | 132 | All SZGR 2.0 genes in this pathway |
| VANOEVELEN MYOGENESIS SIN3A TARGETS | 220 | 133 | All SZGR 2.0 genes in this pathway |