Search results: The pahtway p2265 has 1652 genes in the original annotation. Currently, there are 1025 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
10953TOMM34HTOM34P | TOM34 | URCC3translocase of outer mitochondrial membrane 34-CV:PGCnp
100294145LOC100294145-uncharacterized LOC100294145-CV:GWASdb
CV:PGCnp
10006ABI1ABI-1 | ABLBP4 | E3B1 | NAP1BP | SSH3BP | SSH3BP1abl interactor 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
8453CUL2-cullin 210p11.21CV:PGCnp
DMG:Wockner_2014
Network
22852ANKRD26THC2 | bA145E8.1ankyrin repeat domain 2610p12.1CV:PGCnp
8872CDC123C10orf7 | D123cell division cycle 12310p13CV:PGCnp
10730YME1L1FTSH | MEG4 | PAMP | YME1LYME1 like 1 ATPase10p14CV:PGCnp
26019UPF2HUPF2 | RENT2 | smg-3UPF2 regulator of nonsense transcripts homolog (yeast)10p14-p13CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
Ascano FMRP targets
2665GDI2HEL-S-46e | RABGDIBGDP dissociation inhibitor 210p15CV:PGCnpINTRACELLULAR TRAFFICKING
CompositeSet
5209PFKFB3IPFK2 | PFK2 | iPFK-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 310p15.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
23185LARP4BKIAA0217 | LARP5La ribonucleoprotein domain family member 4B10p15.3CV:PGCnp
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
7073TIAL1TCBP | TIARTIA1 cytotoxic granule-associated RNA binding protein-like 110qCV:GWASdb
CV:PGCnp
7570ZNF22HKR-T1 | KOX15 | ZNF422 | Zfp422zinc finger protein 2210q11CV:PGCnp
5599MAPK8JNK | JNK-46 | JNK1 | JNK1A2 | JNK21B1/2 | PRKM8 | SAPK1 | SAPK1cmitogen-activated protein kinase 810q11.22CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
11130ZWINTHZwint-1 | KNTC2AP | SIP30 | ZWINT1ZW10 interacting kinetochore protein10q21-q22CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
3363HTR75-HT75-hydroxytryptamine receptor 710q21-q24ADT:Sun_2012
Association
CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
CompositeSet
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
7417VDAC2PORvoltage dependent anion channel 210q22DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
6832SUPV3L1SUV3Suv3 like RNA helicase10q22.1CV:PGCnp
DMG:Nishioka_2013
11319ECDGCR2 | HSGT1 | SGT1ecdysoneless cell cycle regulator10q22.2DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
23234DNAJC9HDJC9 | JDD1 | SB73DnaJ heat shock protein family (Hsp40) member C910q22.2DMG:Wockner_2014
PMID:cooccur
132ADKAKadenosine kinase10q22|10q11-q24CV:PGCnp
PMID:cooccur
10285SMNDC1SMNR | SPF30 | TDRD16Csurvival motor neuron domain containing 110q23CV:PGCnp
DMG:Jaffe_2016
3257HPS1BLOC3S1 | HPSHPS1, biogenesis of lysosomal organelles complex 3 subunit 110q23.1-q23.3CV:PGCnp
PMID:cooccur
29760BLNKAGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bcaB-cell linker10q23.2-q23.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
2253FGF8AIGF | FGF-8 | HBGF-8 | HH6 | KAL6fibroblast growth factor 810q24CV:PGCnp
PMID:cooccur
5076PAX2FSGS7 | PAPRSpaired box 210q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
1147CHUKIKBKA | IKK-alpha | IKK1 | IKKA | NFKBIKA | TCF16conserved helix-loop-helix ubiquitous kinase10q24-q25CV:PGCnp
Network
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
355FASALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6Fas cell surface death receptor10q24.1CV:PGCnp
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
10360NPM3PORMIN | TMEM123nucleophosmin/nucleoplasmin 310q24.31CV:PGCnp
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6001RGS10-regulator of G-protein signaling 1010q25CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
10935PRDX3AOP-1 | AOP1 | HBC189 | MER5 | PRO1748 | SP-22 | prx-IIIperoxiredoxin 310q25-q26CV:PGCnp
7511XPNPEP1APP1 | SAMP | XPNPEP | XPNPEPL | XPNPEPL1X-prolyl aminopeptidase (aminopeptidase P) 1, soluble10q25.3CV:PGCnp
DMG:Jaffe_2016
DNM:McCarthy_2014
Ascano FMRP targets
9184BUB3BUB3L | hBUB3BUB3 mitotic checkpoint protein10q26CV:GWAScat
CV:PGCnp
GSMA_IIA
23172FAM175BABRO1 | KIAA0157family with sequence similarity 175 member B10q26.13CV:GWASdb
CV:PGCnp
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
5795PTPRJCD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1protein tyrosine phosphatase, receptor type J11p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1643DDB2DDBB | UV-DDB2 | XPEdamage specific DNA binding protein 211p11.2CV:PGCnp
9793CKAP5CHTOG | MSPS | TOG | TOGp | ch-TOGcytoskeleton associated protein 511p11.2CV:PGCnp
CV:PheWAS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23279NUP160-nucleoporin 160kDa11p11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
10480EIF3MB5 | GA17 | PCID1 | TANGO7 | hfl-B5eukaryotic translation initiation factor 3 subunit M11p13CV:PGCnp
DMG:Jaffe_2016
120526DNAJC24DPH4 | JJJ3 | ZCSL3DnaJ heat shock protein family (Hsp40) member C2411p13CV:PGCnp
4076CAPRIN1GPIAP1 | GPIP137 | GRIP137 | M11S1 | RNG105 | p137GPIcell cycle associated protein 111p13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10196PRMT3HRMT1L3protein arginine methyltransferase 311p15.1CV:PGCnp
DMG:Jaffe_2016
5682PSMA1HC2 | HEL-S-275 | NU | PROS30proteasome subunit alpha 111p15.1CV:PGCnp
DMG:Jaffe_2016
Network
2965GTF2H1BTF2 | P62 | TFB1 | TFIIHgeneral transcription factor IIH subunit 111p15.1-p14CV:PGCnp
Network
PMID:cooccur
9646CTR9SH2BP1 | TSBP | p150 | p150TSPCTR9 homolog, Paf1/RNA polymerase II complex component11p15.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
3939LDHAGSD11 | HEL-S-133P | LDHM | PIG19lactate dehydrogenase A11p15.4CV:PGCnp
Expression
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4654MYOD1MYF3 | MYOD | PUM | bHLHc1myogenic differentiation 111p15.4CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
6150MRPL23L23MRP | RPL23 | RPL23Lmitochondrial ribosomal protein L2311p15.5DMG:Wockner_2014
6181RPLP2D11S2243E | LP2 | P2 | RPP2ribosomal protein lateral stalk subunit P211p15.5DMG:Wockner_2014
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
4676NAP1L4NAP1L4b | NAP2 | NAP2L | hNAP2nucleosome assembly protein 1 like 411p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Ascano FMRP targets
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
10978CLP1HEAB | hClp1cleavage and polyadenylation factor I subunit 111q12CV:PGCnp
DMG:Jaffe_2016
6749SSRP1FACT | FACT80 | T160structure specific recognition protein 111q12CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
Chromatin Remodeling Genes
5024P2RX3P2X3purinergic receptor P2X 311q12CV:PGCnpGPCR SIGNALLING
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
7536SF1BBP | D11S636 | MBBP | ZCCHC25 | ZFM1 | ZNF162splicing factor 111q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7351UCP2BMIQ4 | SLC25A8 | UCPHuncoupling protein 2 (mitochondrial, proton carrier)11q13Association
CV:PGCnp
GO_Annotation
PMID:cooccur
4221MEN1MEAI | SCG2menin 111q13CV:PGCnpChromatin Remodeling Genes
23649POLA2-polymerase (DNA) alpha 2, accessory subunit11q13.1CV:PGCnp
DMG:Jaffe_2016
1374CPT1ACPT1 | CPT1-L | L-CPT1carnitine palmitoyltransferase 1A11q13.2CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Expression
PMID:cooccur
6199RPS6KB2KLS | P70-beta | P70-beta-1 | P70-beta-2 | S6K-beta2 | S6K2 | SRK | STK14B | p70(S6K)-beta | p70S6Kbribosomal protein S6 kinase B211q13.2DMG:Jaffe_2016
7481WNT11HWNT11wingless-type MMTV integration site family member 1111q13.5CV:PGCnp
DMG:Jaffe_2016
10714POLD3P66 | P68 | PPP1R128polymerase (DNA) delta 3, accessory subunit11q14CV:PGCnp
79053ALG8CDG1HALG8, alpha-1,3-glucosyltransferase11q14.1CV:PGCnp
1207CLNS1ACLCI | CLNS1B | IClnchloride nucleotide-sensitive channel 1A11q14.1DNM:Fromer_2014CompositeSet
2526FUT4CD15 | ELFT | FCT3A | FUC-TIV | FUTIV | LeX | SSEA-1fucosyltransferase 411q21CV:GWASdb
CV:PGCnp
9702CEP57MVA2 | PIG8 | TSP57centrosomal protein 57kDa11q21CV:PGCnp
4544MTNR1BFGQTL2 | MEL-1B-R | MT2melatonin receptor 1B11q21-q22CV:PGCnp
GO_Annotation
Network
PMID:cooccur
1662DDX10HRH-J8DEAD-box helicase 1011q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
472ATMAT1 | ATA | ATC | ATD | ATDC | ATE | TEL1 | TELO1ATM serine/threonine kinase11q22-q23CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Ascano FMRP targets
1737DLATDLTA | PDC-E2 | PDCE2dihydrolipoamide S-acetyltransferase11q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3359HTR3A5-HT-3 | 5-HT3A | 5-HT3R | 5HT3R | HTR35-hydroxytryptamine receptor 3A11q23.1ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
LIGAND GATED ION SIGNALING
372ARCN1COPDarchain 111q23.3CV:PGCnp
GSMA_I
PMID:cooccur
6230RPS25S25ribosomal protein S2511q23.3CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
7753ZNF202ZKSCAN10 | ZSCAN42zinc finger protein 20211q24CV:GWAScat
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
22997IGSF9B-immunoglobulin superfamily member 9B11q25CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
6843VAMP1SPAX1 | SYB1 | VAMP-1vesicle associated membrane protein 112pCV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
EXOCYTOSIS
SEROTONIN
Potential synaptic genes
1663DDX11CHL1 | CHLR1 | KRG2 | WABSDEAD/H-box helicase 1112p11CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
3845KRASC-K-RAS | CFC2 | K-RAS2A | K-RAS2B | K-RAS4A | K-RAS4B | KI-RAS | KRAS1 | KRAS2 | NS | NS3 | RALD | RASK2Kirsten rat sarcoma viral oncogene homolog12p12.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanPSP
CompositeSet
4033LRMPJAW1lymphoid restricted membrane protein12p12.1CV:PGCnp
586BCAT1BCATC | BCT1 | ECA39 | MECA39 | PNAS121 | PP18branched chain amino acid transaminase 112p12.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
939CD27S152 | S152. LPFS2 | T14 | TNFRSF7 | Tp55CD27 molecule12p13DEG:Sanders_2013
DMG:vanEijk_2014
PMID:cooccur
2597GAPDHG3PD | GAPD | HEL-S-162ePglyceraldehyde-3-phosphate dehydrogenase12p13DMG:Wockner_2014
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1108CHD4CHD-4 | Mi-2b | Mi2-BETAchromodomain helicase DNA binding protein 412p13CV:PGCnp
DNM:Girard_2011
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
2784GNB3-G protein subunit beta 312p13Association
PMID:cooccur
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
339APOBEC1APOBEC-1 | BEDP | CDAR1 | HEPRapolipoprotein B mRNA editing enzyme catalytic subunit 112p13.1CV:PGCnp
5830PEX5PBD2A | PBD2B | PTS1-BP | PTS1R | PXR1 | RCDP5peroxisomal biogenesis factor 512p13.31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
3736KCNA1AEMK | EA1 | HBK1 | HUK1 | KV1.1 | MBK1 | MK1 | RBK1potassium voltage-gated channel subfamily A member 112p13.32CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
EXCITABILITY
9700ESPL1ESP1 | SEPAextra spindle pole bodies like 1, separase12qCV:PGCnp
GO_Annotation
Ascano FMRP targets
6472SHMT2GLYA | HEL-S-51e | SHMTserine hydroxymethyltransferase 212q12-q14CV:GWAScat
CV:PGC128
CV:PGCnp
6602SMARCD1BAF60A | CRACD1 | Rsc6pSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 112q13-q14CV:PGCnp
Network
Chromatin Remodeling Genes
79022TMEM106C-transmembrane protein 106C12q13.1CV:PGCnp
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
113251LARP4PP13296La ribonucleoprotein domain family member 412q13.12CV:PGCnp
10376TUBA1BK-ALPHA-1tubulin alpha 1b12q13.12CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5463POU6F1BRN5 | MPOU | TCFB1POU class 6 homeobox 112q13.13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1975EIF4BEIF-4B | PRO1843eukaryotic translation initiation factor 4B12q13.13CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
23468CBX5HEL25 | HP1 | HP1Achromobox 512q13.13CV:PGCnp
DNM:Gulsuner_2013
5036PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G412q13.2CV:PGCnp
DMG:Wockner_2014
Network
4141MARSCMT2U | ILFS2 | ILLD | METRS | MRS | MTRNS | SPG70methionyl-tRNA synthetase12q13.3CV:PGCnp
Network
PMID:cooccur
2583B4GALNT1GALGT | GALNACT | GalNAc-T | SPG26beta-1,4-N-acetyl-galactosaminyltransferase 112q13.3CV:PGCnp
DMG:Wockner_2014
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
10728PTGES3P23 | TEBP | cPGESprostaglandin E synthase 312q13.3|12CV:PGCnp
Network
PMID:cooccur
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
5908RAP1BK-REV | RAL1BRAP1B, member of RAS oncogene family12q14CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
11260XPOTXPO3exportin for tRNA12q14.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
56890MDM1-Mdm1 nuclear protein12q15CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
7334UBE2NHEL-S-71 | UBC13 | UBCHBEN; UBC13 | UbcH-ben | UbcH13ubiquitin conjugating enzyme E2 N12q22CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
4801NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y subunit beta12q23.3CV:PGCnp
DMG:Jaffe_2016
4598MVKLRBP | MK | MVLK | POROK3mevalonate kinase12q24CV:PGCnp
8315BRAPBRAP2 | IMP | RNF52BRCA1 associated protein12q24CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
9733SART3DSAP1 | P100 | RP11-13G14 | TIP110 | p110 | p110(nrb)squamous cell carcinoma antigen recognized by T-cells 312q24.1CV:PGCnpAscano FMRP targets
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
6128RPL6L6 | SHUJUN-2 | TAXREB107 | TXREB1ribosomal protein L612q24.1CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9815GIT2CAT-2 | CAT2 | PKLGIT ArfGAP 212q24.1CV:PGCnp
DMG:Jaffe_2016
6910TBX5HOST-box 512q24.1CV:PGCnp
DMG:Jaffe_2016
5501PPP1CCPP-1G | PP1C | PPP1Gprotein phosphatase 1 catalytic subunit gamma12q24.1-q24.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
10094ARPC3ARC21 | p21-Arcactin related protein 2/3 complex subunit 312q24.11CV:PGCnp
GO_Annotation
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
10961ERP29C12orf8 | ERp28 | ERp31 | HEL-S-107 | PDI-DB | PDIA9endoplasmic reticulum protein 2912q24.13CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
8550MAPKAPK5MAPKAP-K5 | MK-5 | MK5 | PRAKmitogen-activated protein kinase-activated protein kinase 512q24.13CV:PGCnp
DMG:Jaffe_2016
605BCL7ABCL7B-cell CLL/lymphoma 7A12q24.13CV:PGCnp
Expression
6175RPLP0L10E | LP0 | P0 | PRLP0 | RPP0ribosomal protein lateral stalk subunit P012q24.2DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4939OAS2-2'-5'-oligoadenylate synthetase 212q24.2CV:GWASdb
CV:PGCnp
6927HNF1AHNF-1A | HNF1 | IDDM20 | LFB1 | MODY3 | TCF-1 | TCF1HNF1 homeobox A12q24.2CV:PGCnp
DMG:Wockner_2014
Network
84900RNFT2TMEM118ring finger protein, transmembrane 212q24.22CV:PGCnp
DMG:Wockner_2014
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5901RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family12q24.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
9735KNTC1RODkinetochore associated 112q24.31CV:PGCnp
51433ANAPC5APC5anaphase promoting complex subunit 512q24.31CV:PGCnp
DNM:Fromer_2014
CompositeSet
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
5715PSMD9Rpn4 | p27proteasome 26S subunit, non-ATPase 912q24.31-q24.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23141ANKLE2KIAA0692 | LEMD7 | Lem4 | MCPH16ankyrin repeat and LEM domain containing 212q24.33CV:PGCnp
DMG:Wockner_2014
2054STX2EPIM | EPM | STX2A | STX2B | STX2Csyntaxin 212q24.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
EXOCYTOSIS
2321FLT1FLT | FLT-1 | VEGFR-1 | VEGFR1fms related tyrosine kinase 113q12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23047PDS5BAPRIN | AS3 | CG008PDS5 cohesin associated factor B13q12.3CV:PGCnpCompositeSet
Darnell FMRP targets
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
1045CDX2CDX-3 | CDX2/AS | CDX3caudal type homeobox 213q12.3DMG:Wockner_2014
10808HSPH1HSP105 | HSP105A | HSP105B | NY-CO-25heat shock protein family H (Hsp110) member 113q12.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
6541SLC7A1ATRC1 | CAT-1 | ERR | HCAT1 | REC1Lsolute carrier family 7 member 113q12.3CV:PGCnp
DMG:Wockner_2014
Expression
2971GTF3AAP2 | TFIIIAgeneral transcription factor IIIA13q12.3-q13.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
3356HTR2A5-HT2A | HTR25-hydroxytryptamine receptor 2A13q14-q21ADT:Sun_2012
Association
Core
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
CompositeSet
10240MRPS31IMOGN38 | MRP-S31 | S31mtmitochondrial ribosomal protein S3113q14.11DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
10301DLEU1BCMS | BCMS1 | DLB1 | DLEU2 | LEU1 | LEU2 | LINC00021 | NCRNA00021 | XTP6deleted in lymphocytic leukemia 1 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
10464PIBF1C13orf24 | CEP90 | PIBFprogesterone immunomodulatory binding factor 113q22.1CV:PGCnp
8428STK24HEL-S-95 | MST3 | MST3B | STE20 | STK3serine/threonine kinase 2413q31.2-q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7174TPP2TPP-2 | TPPIItripeptidyl peptidase II13q32-q33CV:PGCnp
GO_Annotation
Ascano FMRP targets
3843IPO5IMB3 | KPNB3 | Pse1 | RANBP5 | imp5importin 513q32.2Association
CV:PGCnp
DMG:Jaffe_2016
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
6564SLC15A1HPECT1 | HPEPT1 | PEPT1solute carrier family 15 member 113q32.3CV:PGCnp
PMID:cooccur
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
22821RASA3GAP1IP4BP | GAPIIIRAS p21 protein activator 313q34CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
8881CDC16ANAPC6 | APC6 | CDC16Hs | CUT9cell division cycle 1613q34CV:GWASdb
CV:PGCnp
7528YY1DELTA | INO80S | NF-E1 | UCRBP | YIN-YANG-1YY1 transcription factor14qCV:PGCnp
Network
PMID:cooccur
4901NRLD14S46E | NRL-MAF | RP27neural retina leucine zipper14q11.1-q11.2GSMA_I
PMID:cooccur
328APEX1APE | APE1 | APEN | APEX | APX | HAP1 | REF1apurinic/apyrimidinic endodeoxyribonuclease 114q11.2DMG:Nishioka_2013
GSMA_I
Network
3183HNRNPCC1 | C2 | HNRNP | HNRPC | SNRPCheterogeneous nuclear ribonucleoprotein C (C1/C2)14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
Potential synaptic genes
5018OXA1LOXA1oxidase (cytochrome c) assembly 1-like14q11.2CV:PGCnp
DNM:Guipponi_2014
GSMA_I
23256SCFD1C14orf163 | RA410 | SLY1 | SLY1P | STXBP1L2sec1 family domain containing 114q12CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
5687PSMA6IOTA | PROS27 | p27Kproteasome subunit alpha 614q13CV:GWASdb
CV:PGCnp
Network
11177BAZ1AACF1 | WALp1 | WCRF180 | hACF1bromodomain adjacent to zinc finger domain 1A14q13.2CV:GWASdb
CV:PGCnp
6166RPL36ALRPL36Aribosomal protein L36a like14q21CV:PGCnp
4247MGAT2CDG2A | CDGS2 | GLCNACTII | GNT-II | GNT2mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase14q21CV:PGCnp
4287ATXN3AT3 | ATX3 | JOS | MJD | MJD1 | SCA3ataxin 314q21Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
27109ATP5SATPW | FB | HSU79253ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B)14q21.3CV:PGCnp
DMG:Jaffe_2016
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
6617SNAPC1PTFgamma | SNAP43small nuclear RNA activating complex polypeptide 114q22CV:PGCnp
DMG:Jaffe_2016
81542TMX1PDIA11 | TMX | TXNDC | TXNDC1thioredoxin related transmembrane protein 114q22.1CV:PGCnp
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
4149MAXbHLHd4MYC associated factor X14q23CV:PGCnp
PMID:cooccur
5684PSMA3HC8 | PSC3proteasome subunit alpha 314q23CV:PGCnp
Network
5494PPM1APP2C-ALPHA | PP2CA | PP2Calphaprotein phosphatase, Mg2+/Mn2+ dependent 1A14q23.1CV:PGCnp
Network
5529PPP2R5E-protein phosphatase 2 regulatory subunit B', epsilon14q23.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2100ESR2ER-BETA | ESR-BETA | ESRB | ESTRB | Erb | NR3A2estrogen receptor 2 (ER beta)14q23.2DNM:Fromer_2014
Expression
Network
PMID:cooccur
CompositeSet
6710SPTBEL3 | HS2 | HSPTB1 | SPH2spectrin beta, erythrocytic14q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
2079ERHDROERenhancer of rudimentary homolog (Drosophila)14q24.1DMG:Nishioka_2013
4293MAP3K9MEKK9 | MLK1 | PRKE1mitogen-activated protein kinase kinase kinase 914q24.2CV:GWAScat
CV:GWASdb
CV:PGCnp
1743DLSTDLTSdihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)14q24.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9628RGS6GAPregulator of G-protein signaling 614q24.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
3705ITPK1ITRPK1inositol-tetrakisphosphate 1-kinase14q31CV:PGCnp
DMG:Wockner_2014
2957GTF2A1TF2A1 | TFIIA | TFIIA-42 | TFIIALgeneral transcription factor IIA 114q31.1CV:GWASdb
CV:PGCnp
7443VRK1PCH1 | PCH1Avaccinia related kinase 114q32CV:PGCnpAscano FMRP targets
90141EFCAB11C14orf143EF-hand calcium binding domain 1114q32.11CV:PGCnp
PMID:cooccur
9112MTA1-metastasis associated 114q32.3CV:PGCnp
Network
7517XRCC3CMM6X-ray repair complementing defective repair in Chinese hamster cells 314q32.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
23186RCOR1COREST | RCORREST corepressor 114q32.31CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
7453WARSGAMMA-2 | IFI53 | IFP53tryptophanyl-tRNA synthetase14q32.31DNM:Fromer_2014
PMID:cooccur
CompositeSet
1983EIF5EIF-5 | EIF-5Aeukaryotic translation initiation factor 514q32.32CV:PGCnp
DNM:Girard_2011
Expression
CompositeSet
9556C14orf2MP68 | PLPMchromosome 14 open reading frame 214q32.33CV:PGCnp
3320HSP90AA1EL52 | HEL-S-65p | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP-2 | LAP2heat shock protein 90kDa alpha family class A member 114q32.33CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
6218RPS17DBA4 | RPS17L | RPS17L1 | RPS17L2 | S17ribosomal protein S1715qPMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
11339OIP55730547N13Rik | CT86 | LINT-25 | MIS18B | MIS18beta | hMIS18betaOpa interacting protein 515q15.1CV:PGCnp
DNM:Fromer_2014
4058LTKTYK1leukocyte receptor tyrosine kinase15q15.1-q21.1GO_Annotation
PMID:cooccur
9333TGM5PSS2 | TGASE5 | TGASEX | TGM6 | TGMX | TGXtransglutaminase 515q15.2CV:PGCnp
PMID:cooccur
4236MFAP1-microfibrillar associated protein 115q15.3CV:PGCnpAscano FMRP targets
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
9488PIGBGPI-MT-III | PIG-Bphosphatidylinositol glycan anchor biosynthesis class B15q21.3CV:PGCnp
102ADAM10AD10 | AD18 | CD156c | CDw156 | HsT18717 | MADM | RAK | kuzADAM metallopeptidase domain 1015q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
8482SEMA7ACD108 | CDw108 | H-SEMA-K1 | H-Sema-L | JMH | SEMAK1 | SEMALsemaphorin 7A (John Milton Hagen blood group)15q22.3-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
10845CLPX-caseinolytic mitochondrial matrix peptidase chaperone subunit15q22.31DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
2108ETFAEMA | GA2 | MADDelectron transfer flavoprotein alpha subunit15q23-q25CV:PGCnp
3073HEXATSDhexosaminidase subunit alpha15q24.1CV:PGCnp
GO_Annotation
PMID:cooccur
1543CYP1A1AHH | AHRR | CP11 | CYP1 | CYPIA1 | P1-450 | P450-C | P450DXcytochrome P450 family 1 subfamily A member 115q24.1CV:PGCnp
CV:PheWAS
PMID:cooccur
5428POLGMDP1 | MIRAS | MTDPS4A | MTDPS4B | PEO | POLG1 | POLGA | SANDO | SCAEpolymerase (DNA) gamma, catalytic subunit15q25CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
400410ST20HCCS-1suppressor of tumorigenicity 2015q25.1CV:PGCnp
DMG:Wockner_2014
5685PSMA4HC9 | HsT17706 | PSC9proteasome subunit alpha 415q25.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
641BLMBS | RECQ2 | RECQL2 | RECQL3Bloom syndrome RecQ like helicase15q26.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
55215FANCIKIAA1794Fanconi anemia complementation group I15q26.1CV:PGCnpAscano FMRP targets
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
6627SNRPA1Lea1small nuclear ribonucleoprotein polypeptide A'15q26.3CV:PGCnp
DMG:Wockner_2014
6210RPS15AS15aribosomal protein S15a16pCV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
2521FUSALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLSFUS RNA binding protein16p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
4150MAZPUR1 | Pur-1 | SAF-1 | SAF-2 | SAF-3 | ZF87 | ZNF801 | Zif87MYC associated zinc finger protein16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
CompositeSet
Darnell FMRP targets
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
9344TAOK2MAP3K17 | PSK | PSK1 | PSK1-BETA | TAO1 | TAO2TAO kinase 216p11.2CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6911TBX6SCDO5T-box 616p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
930CD19B4 | CVID3CD19 molecule16p11.2GSMA_IIE
PMID:cooccur
7385UQCRC2MC3DN5 | QCR2 | UQCR2ubiquinol-cytochrome c reductase core protein II16p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
54700RRN3A-270G1.2 | TIFIARRN3 homolog, RNA polymerase I transcription factor16p12CV:PGCnp
GSMA_IIE
5930RBBP6MY038 | P2P-R | PACT | RBQ-1 | SNAMAretinoblastoma binding protein 616p12.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIE
5347PLK1PLK | STPK13polo like kinase 116p12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
112479ERI2EXOD1 | ZGRF5ERI1 exoribonuclease family member 216p12.3CV:PGCnp
GSMA_IIE
4261CIITAC2TA | CIITAIV | MHC2TA | NLRAclass II, major histocompatibility complex, transactivator16p13CV:PGCnp
4363ABCC1ABC29 | ABCC | GS-X | MRP | MRP1ATP binding cassette subfamily C member 116p13.1CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
608TNFRSF17BCM | BCMA | CD269 | TNFRSF13Atumor necrosis factor receptor superfamily member 1716p13.1CV:PGCnp
10607TBL3SAZD | UTP13transducin (beta)-like 316p13.3CV:PGCnp
10921RNPS1E5.1RNA binding protein S1, serine-rich domain16p13.3CV:PGCnp
DMG:Nishioka_2013
7329UBE2IC358B7.1 | P18 | UBC9ubiquitin conjugating enzyme E2 I16p13.3CV:PGCnp
DMG:Jaffe_2016
Network
10131TRAP1HSP 75 | HSP75 | HSP90L | TRAP-1TNF receptor-associated protein 116p13.3CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
9894TELO2CLK2 | TEL2telomere maintenance 216p13.3DMG:Wockner_2014
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
11051NUDT21CFIM25 | CPSF5nudix hydrolase 2116q12.2CV:PGCnp
DMG:Nishioka_2013
Network
79191IRX3IRX-1 | IRXB1iroquois homeobox 316q12.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
10300KATNB1KAT | LIS6katanin p80 (WD repeat containing) subunit B 116q21CV:PGCnp
GO_Annotation
PMID:cooccur
1459CSNK2A2CK2A2 | CK2alpha' | CSNK2A1casein kinase 2 alpha 216q21CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
23019CNOT1AD-005 | CDC39 | NOT1 | NOT1HCCR4-NOT transcription complex subunit 116q21CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
8883NAE1A-116A10.1 | APPBP1 | HPP1 | ula-1NEDD8 activating enzyme E1 subunit 116q22CV:PGCnp
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
1006CDH8Nbla04261cadherin 816q22.1CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
80777CYB5BCYB5-M | CYPB5M | OMB5cytochrome b5 type B (outer mitochondrial membrane)16q22.1CV:PGCnpG2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
6483ST3GAL2Gal-NAc6S | SIAT4B | ST3GALII | ST3GalA.2ST3 beta-galactoside alpha-2,3-sialyltransferase 216q22.1CV:PGCnp
DMG:Wockner_2014
766CA7CAVIIcarbonic anhydrase VII16q22.1CV:PGCnp
DMG:Jaffe_2016
10204NUTF2NTF2 | PP15nuclear transport factor 216q22.1CV:PGCnp
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
9057SLC7A6LAT-2 | LAT3 | y+LAT-2solute carrier family 7 member 616q22.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
CompositeSet
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
5713PSMD7MOV34 | P40 | Rpn8 | S12proteasome 26S subunit, non-ATPase 716q22.3CV:PGCnp
DMG:Wockner_2014
164AP1G1ADTG | CLAPG1adaptor related protein complex 1 gamma 1 subunit16q23CV:PGCnp
DMG:Jaffe_2016
3735KARSCMTRIB | DFNB89 | KARS1 | KARS2 | KRSlysyl-tRNA synthetase16q23.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10200MPHOSPH6MPP | MPP-6 | MPP6M-phase phosphoprotein 616q23.3CV:PGCnp
DMG:Jaffe_2016
Network
863CBFA2T3ETO2 | MTG16 | MTGR2 | ZMYND4core-binding factor, runt domain, alpha subunit 2; translocated to, 316q24CV:PGCnp
DMG:Wockner_2014
654780SFPQ-splicing factor proline/glutamine-rich16q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
9100USP10UBPOubiquitin specific peptidase 1016q24.1CV:PGCnp
DNM:Guipponi_2014
5336PLCG2APLAID | FCAS3 | PLC-IV | PLC-gamma-2phospholipase C gamma 216q24.1CV:GWASdb
CV:PGCnp
PMID:cooccur
3394IRF8H-ICSBP | ICSBP | ICSBP1 | IMD32A | IMD32B | IRF-8interferon regulatory factor 816q24.1CV:PGCnp
81631MAP1LC3BATG8F | LC3B | MAP1A/1BLC3 | MAP1LC3B-amicrotubule associated protein 1 light chain 3 beta16q24.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
2588GALNSGALNAC6S | GAS | GalN6S | MPS4Agalactosamine (N-acetyl)-6-sulfatase16q24.3CV:PGCnp
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
60528ELAC2COXPD17 | ELC2 | HPC2elaC ribonuclease Z 217p11.2CV:PGCnp
DMG:Jaffe_2016
5636PRPSAP2PAP41phosphoribosyl pyrophosphate synthetase-associated protein 217p11.2-p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
50628GEMIN4HC56 | HCAP1 | HHRF-1 | p97gem nuclear organelle associated protein 417p13CV:PGCnp
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
26168SENP3SMT3IP1 | SSP3 | Ulp1SUMO1/sentrin/SMT3 specific peptidase 317p13CV:PGCnp
DMG:Wockner_2014
239ALOX1212-LOX | 12S-LOX | LOG12arachidonate 12-lipoxygenase17p13.1DMG:vanEijk_2014
PMID:cooccur
7157TP53BCC7 | LFS1 | P53 | TRP53tumor protein p5317p13.1Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
8711TNK1-tyrosine kinase, non-receptor, 117p13.1CV:PGCnp
9135RABEP1RAB5EP | RABPT5rabaptin, RAB GTPase binding effector protein 117p13.2CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
7326UBE2G1E217K | UBC7 | UBE2Gubiquitin conjugating enzyme E2 G117p13.2CV:PGCnp
4927NUP88-nucleoporin 88kDa17p13.2CV:PGCnp
27043PELP1MNAR | P160proline, glutamate and leucine rich protein 117p13.2CV:PGCnp
DMG:Wockner_2014
6117RPA1HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70replication protein A117p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
708C1QBPGC1QBP | HABP1 | SF2p32 | gC1Q-R | gC1qR | p32complement component 1, q subcomponent binding protein17p13.3CV:PGCnp
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
55720TSR1-TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)17p13.3CV:PGCnp
DMG:Jaffe_2016
7531YWHAE14-3-3E | HEL2 | KCIP-1 | MDCR | MDStyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon17p13.3Association
CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
9349RPL23L23 | rpL17ribosomal protein L2317qCV:PGCnp
Network
9527GOSR1GOLIM2 | GOS-28 | GOS28 | GOS28/P28 | GS28 | P28golgi SNAP receptor complex member 117q11CV:PGCnp
GO_Annotation
9618TRAF4CART1 | MLN62 | RNF83TNF receptor associated factor 417q11-q12CV:PGCnp
PMID:cooccur
642BLMHBH | BMHbleomycin hydrolase17q11.2CV:PGCnp
4843NOS2HEP-NOS | INOS | NOS | NOS2Anitric oxide synthase 217q11.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
7756ZNF207BuGZ | hBuGZzinc finger protein 20717q11.2CV:PGCnp
6776STAT5AMGF | STAT5signal transducer and activator of transcription 5A17q11.2CV:PGCnp
DMG:Wockner_2014
Network
51379CRLF3CREME-9 | CREME9 | CRLM9 | CYTOR4 | FRWS | p48.2cytokine receptor-like factor 317q11.2CV:PGCnp
23512SUZ12CHET9 | JJAZ1SUZ12 polycomb repressive complex 2 subunit17q11.2CV:PGCnp
DMG:Nishioka_2013
Chromatin Remodeling Genes
26284ERAL1CEGA | ERA | ERA-W | ERAL1A | H-ERA | HERA-A | HERA-BEra-like 12S mitochondrial rRNA chaperone 117q11.2CV:PGCnp
DMG:Jaffe_2016
1440CSF3C17orf33 | CSF3OS | GCSFcolony stimulating factor 317q11.2-q12CV:PGCnp
3980LIG3LIG2ligase III, DNA, ATP-dependent17q11.2-q12CV:PGCnpAscano FMRP targets
26574AATFBFR2 | CHE-1 | CHE1 | DEDapoptosis antagonizing transcription factor17q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
5469MED1CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2mediator complex subunit 117q12CV:PGCnp
6143RPL19L19ribosomal protein L1917q12DMG:Jaffe_2016G2Cdb.humanPSD
G2Cdb.humanPSP
9326ZNHIT3TRIP3zinc finger HIT-type containing 317q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
5409PNMTPENT | PNMTasephenylethanolamine N-methyltransferase17q12CV:PGCnp
PMID:cooccur
6348CCL3G0S19-1 | LD78ALPHA | MIP-1-alpha | MIP1A | SCYA3C-C motif chemokine ligand 317q12PMID:cooccur
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
6155RPL27L27ribosomal protein L2717q21CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
10230NBR2NCRNA00192neighbor of BRCA1 gene 2 (non-protein coding)17q21CV:PGCnp
DMG:Wockner_2014
3060HCRTNRCLP1 | OX | PPOXhypocretin (orexin) neuropeptide precursor17q21GO_Annotation
PMID:cooccur
11056DDX52HUSSY19 | ROK1DEAD-box helicase 5217q21.1CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
9862MED24ARC100 | CRSP100 | CRSP4 | DRIP100 | MED5 | THRAP4 | TRAP100mediator complex subunit 2417q21.1CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
5709PSMD3P58 | RPN3 | S3 | TSTA2proteasome 26S subunit, non-ATPase 317q21.1CV:PGCnp
54474KRT20CD20 | CK-20 | CK20 | K20 | KRT21keratin 2017q21.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
3857KRT9CK-9 | EPPK | K9keratin 917q21.2CV:PGCnp
DMG:Wockner_2014
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
4830NME1AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1NME/NM23 nucleoside diphosphate kinase 117q21.3CV:PGCnpCELL METABOLISM
CompositeSet
4831NME2NDKB | NDPK-B | NDPKB | NM23-H2 | NM23B | PUFNME/NM23 nucleoside diphosphate kinase 217q21.3CV:PGCnp
Network
CELL METABOLISM
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
2695GIP-gastric inhibitory polypeptide17q21.3-q22CV:PGCnp
PMID:cooccur
4836NMT1NMTN-myristoyltransferase 117q21.31CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
Ascano FMRP targets
7343UBTFNOR-90 | UBF | UBF-1 | UBF1 | UBF2upstream binding transcription factor, RNA polymerase I17q21.31CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
1394CRHR1CRF-R | CRF-R-1 | CRF-R1 | CRF1 | CRFR-1 | CRFR1 | CRH-R-1 | CRH-R1 | CRHR | CRHR1Lcorticotropin releasing hormone receptor 117q21.31CV:PGCnp
PMID:cooccur
GPCR SIGNALLING
6668SP2-Sp2 transcription factor17q21.32CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
996CDC27ANAPC3 | APC3 | CDC27Hs | D0S1430E | D17S978E | H-NUC | HNUC | NUC2cell division cycle 2717q21.32CV:PGCnp
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
51096UTP18CGI-48 | WDR50UTP18, small subunit processome component17q21.33CV:PGCnp
DMG:Wockner_2014
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1353COX11COX11PCOX11 cytochrome c oxidase copper chaperone17q22CV:PGCnp
5889RAD51CBROVCA3 | FANCO | R51H3 | RAD51L2RAD51 paralog C17q22CV:PGCnp
DMG:Wockner_2014
11011TLK2HsHPK | PKU-ALPHAtousled like kinase 217q23CV:PGCnp
DNM:Gulsuner_2013
Network
8493PPM1DPP2C-DELTA | WIP1protein phosphatase, Mg2+/Mn2+ dependent 1D17q23.2DMG:Nishioka_2013
DMG:Wockner_2014
10238DCAF7AN11 | HAN11 | SWAN-1 | WDR68DDB1 and CUL4 associated factor 717q23.3CV:PGCnp
DMG:Wockner_2014
2885GRB2ASH | EGFRBP-GRB2 | Grb3-3 | MST084 | MSTP084 | NCKAP2growth factor receptor bound protein 217q24-q25CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
5578PRKCAAAG6 | PKC-alpha | PKCA | PRKACAprotein kinase C alpha17q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
10672GNA13G13G protein subunit alpha 1317q24.3CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
6182MRPL125c5-2 | L12mt | MRP-L31/34 | MRPL7 | MRPL7/L12 | RPML12mitochondrial ribosomal protein L1217q25DMG:Nishioka_2013
3607FOXK2ILF | ILF-1 | ILF1forkhead box K217q25CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
94015TTYH2C17orf29tweety family member 217q25.1CV:PGCnp
DEG:Zhao_2015
3396ICT1DS-1 | DS1 | MRP-L58immature colon carcinoma transcript 117q25.1CV:PGCnp
439921MXRA7PS1TP1 | TMAP1matrix-remodelling associated 717q25.1CV:PGCnp
DMG:Wockner_2014
9775EIF4A3DDX48 | MUK34 | NMP265 | NUK34 | RCPS | eIF4AIIIeukaryotic translation initiation factor 4A317q25.3CV:PGCnp
PMID:cooccur
5831PYCR1ARCL2B | ARCL3B | P5C | P5CR | PIG45 | PP222 | PRO3 | PYCRpyrroline-5-carboxylate reductase 117q25.3PMID:cooccurG2Cdb.humanPSD
G2Cdb.humanPSP
10939AFG3L2SCA28 | SPAX5AFG3 like matrix AAA peptidase subunit 218p11CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
4158MC2RACTHRmelanocortin 2 receptor18p11.2CV:PGCnp
PMID:cooccur
4729NDUFV2CI-24kNADH:ubiquinone oxidoreductase core subunit V218p11.22Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
5932RBBP8COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2retinoblastoma binding protein 818q11.2CV:PGCnp
DMG:Jaffe_2016
6875TAF4BSPGF13 | TAF2C2 | TAFII105TATA-box binding protein associated factor 4b18q11.2CV:PGCnp
DMG:Wockner_2014
7572ZNF24KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191zinc finger protein 2418q12CV:PGCnp
8170SLC14A2HUT2 | UT-A2 | UT2 | UTA | UTR | hUT-A6solute carrier family 14 member 218q12.3CV:PGCnp
4200ME2ODS1malic enzyme 2, NAD(+)-dependent, mitochondrial18q21CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
498ATP5A1ATP5A | ATP5AL2 | ATPM | COXPD22 | HEL-S-123m | MC5DN4 | MOM2 | OMR | ORM | hATP1ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle18q21CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8932MBD2DMTase | NY-CO-41methyl-CpG binding domain protein 218q21CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
4087SMAD2JV18 | JV18-1 | MADH2 | MADR2 | hMAD-2 | hSMAD2SMAD family member 218q21.1CV:PGCnp
Network
PMID:cooccur
9063PIAS2ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4protein inhibitor of activated STAT 218q21.1CV:PGCnp
PMID:cooccur
2922GRPBN | GRP-10 | preproGRP | proGRPgastrin releasing peptide18q21.1-q21.32CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
22850ADNP2ZNF508ADNP homeobox 218q23CV:PGCnp
PMID:cooccur
10907TXNL4ABMKS | DIB1 | DIM1 | SNRNP15 | TXNL4 | U5-15kDthioredoxin like 4A18q23CV:PGCnp
6142RPL18AL18Aribosomal protein L18a19p13CV:PGCnp
1311COMPEDM1 | EPD1 | MED | PSACH | THBS5cartilage oligomeric matrix protein19p13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23149FCHO1-FCH domain only 119p13.11CV:PGCnpCompositeSet
Darnell FMRP targets
25804LSM4GRP | YER112WLSM4 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.11CV:GWASdb
CV:PGCnp
Network
94039ZNF101HZF12zinc finger protein 10119p13.11CV:PGCnp
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
811CALRCRT | HEL-S-99n | RO | SSA | cC1qRcalreticulin19p13.13CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
1994ELAVL1ELAV1 | HUR | Hua | MelGELAV like RNA binding protein 119p13.2CV:PGCnp
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
6597SMARCA4BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2bSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 419p13.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
2193FARSACML33 | FARSL | FARSLA | FRSA | PheHAphenylalanyl-tRNA synthetase alpha subunit19p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
5725PTBP1HNRNP-I | HNRNPI | HNRPI | PTB | PTB-1 | PTB-T | PTB2 | PTB3 | PTB4 | pPTBpolypyrimidine tract binding protein 119p13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression
10036CHAF1ACAF-1 | CAF1 | CAF1B | CAF1P150 | P150chromatin assembly factor 1 subunit A19p13.3CV:PGCnp
DMG:Wockner_2014
Network
1938EEF2EEF-2 | EF-2 | EF2 | SCA26eukaryotic translation elongation factor 219p13.3DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
51690LSM7YNL147WLSM7 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.3DMG:vanEijk_2014
Network
7064THOP1EP24.15 | MEPD_HUMAN | MP78 | TOPthimet oligopeptidase 119p13.3CV:PGCnp
DMG:Wockner_2014
8570KHSRPFBP2 | FUBP2 | KSRPKH-type splicing regulatory protein19p13.3CV:PGCnp
DMG:Wockner_2014
1455CSNK1G2CK1g2casein kinase 1 gamma 219p13.3CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
10775POP4RPP29POP4 homolog, ribonuclease P/MRP subunit19q12CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
898CCNE1CCNE | pCCNE1cyclin E119q12CV:PGCnp
DMG:Montano_2016
Network
10452TOMM40C19orf1 | D19S1177E | PER-EC1 | PEREC1 | TOM40translocase of outer mitochondrial membrane 4019q13PMID:cooccur
7040TGFB1CED | DPD1 | LAP | TGFB | TGFbetatransforming growth factor beta 119q13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5050PAFAH1B3PAFAHGplatelet activating factor acetylhydrolase 1b catalytic subunit 319q13.1GO_Annotation
PMID:cooccur
6626SNRPAMud1 | U1-A | U1Asmall nuclear ribonucleoprotein polypeptide A19q13.1CV:PGCnp
DMG:Jaffe_2016
933CD22SIGLEC-2 | SIGLEC2CD22 molecule19q13.1CV:PGCnp
DMG:Wockner_2014
Network
11184MAP4K1HPK1mitogen-activated protein kinase kinase kinase kinase 119q13.1-q13.4CV:PGCnp
26065LSM14AC19orf13 | FAM61A | RAP55 | RAP55ALSM14A mRNA processing body assembly factor19q13.11CV:PGCnp
1054CEBPGGPE1BP | IG/EBP-1CCAAT/enhancer binding protein gamma19q13.11CV:PGCnp
26330GAPDHSGAPD2 | GAPDH-2 | GAPDS | HEL-S-278 | HSD-35glyceraldehyde-3-phosphate dehydrogenase, spermatogenic19q13.12DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
973CD79AIGA | MB-1CD79a molecule19q13.2DMG:vanEijk_2014
GO_Annotation
100124696TEC-transient erythroblastopenia of childhood19q13.2CV:PGCnp
PMID:cooccur
5817PVRCD155 | HVED | NECL5 | Necl-5 | PVS | TAGE4poliovirus receptor19q13.2CV:PGCnp
PMID:cooccur
11100HNRNPUL1E1B-AP5 | E1BAP5 | HNRPUL1heterogeneous nuclear ribonucleoprotein U-like 119q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
6633SNRPD2SMD2 | SNRPD1 | Sm-D2small nuclear ribonucleoprotein D2 polypeptide19q13.2CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
6510SLC1A5AAAT | ASCT2 | ATBO | M7V1 | M7VS1 | R16 | RDRCsolute carrier family 1 member 519q13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3276PRMT1ANM1 | HCP1 | HRMT1L2 | IR1B4protein arginine methyltransferase 119q13.3CV:PGCnpChromatin Remodeling Genes
11129CLASRPCLASP | SFRS16 | SWAP2CLK4-associating serine/arginine rich protein19q13.3CV:PGCnp
27036SIGLEC7AIRM1 | CD328 | CDw328 | D-siglec | QA79 | SIGLEC-7 | SIGLEC19P | SIGLECP2 | p75 | p75/AIRM1sialic acid binding Ig like lectin 719q13.3CV:PGCnp
DMG:vanEijk_2014
581BAXBCL2L4BCL2-associated X protein19q13.3-q13.4GO_Annotation
PMID:cooccur
4861NPAS1MOP5 | PASD5 | bHLHe11neuronal PAS domain protein 119q13.32CV:PGCnp
GO_Annotation
PMID:cooccur
23211ZC3H4C19orf7zinc finger CCCH-type containing 419q13.32CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5971RELBI-REL | IREL | REL-Bv-rel avian reticuloendotheliosis viral oncogene homolog B19q13.32CV:PGCnp
GO_Annotation
Network
6689SPIBSPI-BSpi-B transcription factor19q13.33CV:PGCnp
DNM:Xu_2012
CompositeSet
4849CNOT3LENG2 | NOT3 | NOT3HCCR4-NOT transcription complex subunit 319q13.4CV:PGCnp
7693ZNF134pHZ-15zinc finger protein 13419q13.4CV:PGCnp
DMG:Jaffe_2016
6193RPS5S5ribosomal protein S519q13.4CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
10155TRIM28KAP1 | PPP1R157 | RNF96 | TF1B | TIF1Btripartite motif containing 2819q13.4CV:PGCnpAscano FMRP targets
11338U2AF2U2AF65U2 small nuclear RNA auxiliary factor 219q13.42CV:PGCnp
DMG:Jaffe_2016
Network
7554ZNF8HF.18 | Zfp128zinc finger protein 819q13.43CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
9040UBE2MUBC-RS2 | UBC12 | hUbc12ubiquitin conjugating enzyme E2 M19q13.43CV:PGCnp
DMG:Wockner_2014
6566SLC16A1HHF7 | MCT | MCT1 | MCT1Dsolute carrier family 16 member 11p12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
4893NRASALPS4 | CMNS | N-ras | NCMS | NRAS1 | NS6neuroblastoma RAS viral (v-ras) oncogene homolog1p13.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
79084WDR77HKMT1069 | MEP-50 | MEP50 | Nbla10071 | p44 | p44/Mep50WD repeat domain 771p13.2CV:PGCnp
Expression
GSMA_I
829CAPZA1CAPPA1 | CAPZ | CAZ1capping actin protein of muscle Z-line alpha subunit 11p13.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
80143SIKE1SIKEsuppressor of IKBKE 11p13.2CV:PGCnp
257ALX3FND | FND1ALX homeobox 31p13.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6272SORT1Gp95 | LDLCQ6 | NT3 | NTR3sortilin 11p13.3|1p21.3-p13.1DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
25950RWDD3RSUMERWD domain containing 31p21.3CV:PGCnp
DMG:Wockner_2014
2672GFI1GFI-1 | GFI1A | SCN2 | ZNF163growth factor independent 1 transcription repressor1p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
6125RPL5DBA6 | L5 | MSTP030 | PPP1R135ribosomal protein L51p22.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
11146GLMNFAP | FAP48 | FAP68 | FKBPAP | GLML | GVM | VMGLOMglomulin, FKBP associated protein1p22.1CV:PGCnp
1810DR1NC2 | NC2-BETA | NC2Bdown-regulator of transcription 11p22.1CV:PGCnp
Expression
PMID:cooccur
34ACADMACAD1 | MCAD | MCADHacyl-CoA dehydrogenase, C-4 to C-12 straight chain1p31CV:PGCnp
GSMA_IIA
26135SERBP1CGI-55 | CHD3IP | HABP4L | PAI-RBP1 | PAIRBP1SERPINE1 mRNA binding protein 11p31CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
5876RABGGTBGGTBRab geranylgeranyltransferase beta subunit1p31CV:PGCnp
DEG:Maycox_2009
GSMA_IIA
9403SEP15-15 kDa selenoprotein1p31CV:PGCnp
DMG:Wockner_2014
26009ZZZ3ATAC1zinc finger ZZ-type containing 31p31.1CV:PGCnp
GSMA_IIA
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
11080DNAJB4DNAJW | DjB4 | HLJ1DnaJ heat shock protein family (Hsp40) member B41p31.1CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
CompositeSet
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
4116MAGOHMAGOH1 | MAGOHAmago homolog, exon junction complex core component1p32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
22996TTC39AC1orf34 | DEME-6tetratricopeptide repeat domain 39A1p32.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2035EPB414.1R | EL1 | HEerythrocyte membrane protein band 4.11p33-p32CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
26292MYCBPAMY-1MYC binding protein1p33-p32.2DMG:Nishioka_2013
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
1802DPH2DPH2L2DPH2 homolog1p34CV:PGCnp
DMG:Jaffe_2016
3065HDAC1GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 11p34CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7388UQCRHQCR6 | UQCR8ubiquinol-cytochrome c reductase hinge protein1p34.1CV:PGCnp
8761PABPC4APP-1 | APP1 | PABP4 | iPABPpoly(A) binding protein, cytoplasmic 4 (inducible form)1p34.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
5690PSMB2HC7-Iproteasome subunit beta 21p34.2CV:PGCnp
PMID:cooccur
10946SF3A3PRP9 | PRPF9 | SAP61 | SF3a60splicing factor 3a subunit 31p34.3CV:PGCnp
6421SFPQPOMP100 | PPP1R140 | PSFsplicing factor proline/glutamine-rich1p34.3CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
6118RPA2REPA2 | RP-A p32 | RP-A p34 | RPA32replication protein A21p35CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8565YARSCMTDIC | TYRRS | YRS | YTStyrosyl-tRNA synthetase1p35.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
23633KPNA6IPOA7 | KPNA7karyopherin subunit alpha 61p35.1CV:PGCnp
DMG:Nishioka_2013
9410SNRNP4040K | HPRP8BP | PRP8BP | PRPF8BP | SPF38 | WDR57small nuclear ribonucleoprotein U5 subunit 401p35.2CV:PGCnp
DMG:Wockner_2014
5511PPP1R8ARD-1 | ARD1 | NIPP-1 | NIPP1 | PRO2047protein phosphatase 1 regulatory subunit 81p35.3CV:PGCnp
DMG:Wockner_2014
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
6883TAF12TAF2J | TAFII20TATA-box binding protein associated factor 121p35.3CV:PGCnp
6723SRMPAPT | SPDSY | SPS1 | SRML1spermidine synthase1p36-p22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1104RCC1CHC1 | RCC1-I | SNHG3-RCC1regulator of chromosome condensation 11p36.1CV:PGCnp
DMG:Jaffe_2016
6390SDHBCWS2 | IP | PGL4 | SDH | SDH1 | SDH2 | SDHIPsuccinate dehydrogenase complex iron sulfur subunit B1p36.1-p35CV:PGCnp
Expression
6135RPL11DBA7 | GIG34 | L11ribosomal protein L111p36.1-p35CV:PGCnp
DMG:vanEijk_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
10250SRRM1160-KD | POP101 | SRM160serine and arginine repetitive matrix 11p36.11CV:PGCnp
DMG:Jaffe_2016
10236HNRNPRHNRPR | hnRNP-Rheterogeneous nuclear ribonucleoprotein R1p36.12CV:PGCnp
DMG:Jaffe_2016
2023ENO1ENO1L1 | HEL-S-17 | MPB1 | NNE | PPHenolase 1, (alpha)1p36.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2475MTORFRAP | FRAP1 | FRAP2 | RAFT1 | RAPT1 | SKSmechanistic target of rapamycin1p36.2CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23435TARDBPALS10 | TDP-43TAR DNA binding protein1p36.22CV:PGCnp
PMID:cooccur
378708APITD1CENP-S | CENPS | FAAP16 | MHF1apoptosis-inducing, TAF9-like domain 11p36.22CV:PGCnp
DMG:Wockner_2014
1805DPTTRAMPdermatopontin1q12-q23CV:PGCnp
PMID:cooccur
405ARNTHIF-1-beta | HIF-1beta | HIF1-beta | HIF1B | HIF1BETA | TANGO | bHLHe2aryl hydrocarbon receptor nuclear translocator1q21CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
5692PSMB4HN3 | HsN3 | PROS-26 | PROS26proteasome subunit beta 41q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10899JTBHJTB | HSPC222 | PAR | hJTjumping translocation breakpoint1q21CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
10623POLR3CRPC3 | RPC62polymerase (RNA) III subunit C1q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
1163CKS1BCKS1 | PNAS-16 | PNAS-18 | ckshs1CDC28 protein kinase regulatory subunit 1B1q21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
10262SF3B4AFD1 | Hsh49 | SAP49 | SF3b49splicing factor 3b subunit 41q21.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
3782KCNN3KCa2.3 | SK3 | SKCA3 | hSK3potassium calcium-activated channel subfamily N member 31q21.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
2029ENSAARPP-19eendosulfine alpha1q21.3CV:PGCnp
DEG:Zhao_2015
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
2224FDPSFPPS | FPS | POROK9farnesyl diphosphate synthase1q22CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
3068HDGFHMG1L2hepatoma-derived growth factor1q23.1CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
261726TIPRLTIP | TIP41TOR signaling pathway regulator1q23.2CV:PGCnp
DMG:Jaffe_2016
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
9887SMG7C1orf16 | EST1C | SGA56MSMG7 nonsense mediated mRNA decay factor1q25CV:PGCnp
DMG:Jaffe_2016
7175TPR-translocated promoter region, nuclear basket protein1q25CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Ascano FMRP targets
777CACNA1EBII | CACH6 | CACNL1A6 | Cav2.3calcium voltage-gated channel subunit alpha1 E1q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5208PFKFB2PFK-2/FBPase-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 21q31CV:PGCnp
Network
PMID:cooccur
4194MDM4HDMX | MDMX | MRP1MDM4, p53 regulator1q32CV:PGCnp
Network
PMID:cooccur
5929RBBP5RBQ3 | SWD1retinoblastoma binding protein 51q32CV:PGCnp
DNM:Gulsuner_2013
Chromatin Remodeling Genes
23046KIF21B-kinesin family member 21B1q32.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
5778PTPN7BPTP-4 | HEPTP | LC-PTP | LPTP | PTPNIprotein tyrosine phosphatase, non-receptor type 71q32.1CV:PGCnp
PMID:cooccur
9283GPR37L1ET(B)R-LP-2 | ETBR-LP-2G protein-coupled receptor 37 like 11q32.1CV:PGCnp
DMG:Wockner_2014
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
25782RAB3GAP2RAB3-GAP150 | RAB3GAP150 | SPG69 | WARBM2 | p150RAB3 GTPase activating non-catalytic protein subunit 21q41CV:PGCnp
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2058EPRSEARS | GLUPRORS | PARS | PIG32 | QARS | QPRSglutamyl-prolyl-tRNA synthetase1q41GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
2590GALNT2GalNAc-T2polypeptide N-acetylgalactosaminyltransferase 21q41-q42CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
142PARP1ADPRT | ADPRT 1 | ADPRT1 | ARTD1 | PARP | PARP-1 | PPOL | pADPRT-1poly(ADP-ribose) polymerase 11q41-q42CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
8443GNPATDAP-AT | DAPAT | DHAPAT | RCDP2glyceronephosphate O-acyltransferase1q42Association
CV:PGCnp
PMID:cooccur
CompositeSet
7257TSNAXTRAXtranslin-associated factor X1q42.1Association
DNM:Fromer_2014
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
2271FHFMRD | HLRCC | LRCC | MCL | MCUL1fumarate hydratase1q42.1CV:PGCnp
PMID:cooccur
6726SRP9ALURBPsignal recognition particle 9kDa1q42.12CV:PGCnp
DMG:Nishioka_2013
9816URB2KIAA0133 | NET10 | NPA2URB2 ribosome biogenesis 2 homolog (S. cerevisiae)1q42.13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
23029RBM34-RNA binding motif protein 341q42.3DMG:Jaffe_2016
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
4548MTRHMAG | MS | cblG5-methyltetrahydrofolate-homocysteine methyltransferase1q43Association
CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
3192HNRNPUHNRNPU-AS1 | HNRPU | SAF-A | SAFA | U21.1 | hnRNP Uheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)1q44DMG:Jaffe_2016
159ADSSADEH | ADSS 2adenylosuccinate synthase1q44CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
10621POLR3FRPC39 | RPC6polymerase (RNA) III subunit F20p11.23CV:PGCnp
DMG:Jaffe_2016
GSMA_I
5332PLCB4ARCND2 | PI-PLCphospholipase C beta 420p12CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
6629SNRPB2Msl1small nuclear ribonucleoprotein polypeptide B20p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
140901STK35CLIK1 | STK35L1serine/threonine kinase 3520p13CV:PGCnp
DMG:Nishioka_2013
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
6628SNRPBCCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-Bsmall nuclear ribonucleoprotein polypeptides B and B120p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3420IDH3BH-IDHB | RP46isocitrate dehydrogenase 3 (NAD+) beta20p13CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
5111PCNAATLD2proliferating cell nuclear antigen20pter-p12Network
PMID:cooccur
22919MAPRE1EB1microtubule associated protein RP/EB family member 120q11.1-q11.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
2937GSSGSHS | HEL-S-64p | HEL-S-88nglutathione synthetase20q11.2Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
8894EIF2S2EIF2 | EIF2B | EIF2beta | PPP1R67 | eIF-2-betaeukaryotic translation initiation factor 2 subunit beta20q11.2CV:PGCnp
Network
Ascano FMRP targets
5933RBL1CP107 | PRB1 | p107retinoblastoma-like 120q11.2CV:PGCnp
DMG:Jaffe_2016
9777TM9SF4dJ836N17.2transmembrane 9 superfamily protein member 420q11.21CV:PGCnp
22913RALYHNRPCL2 | P542RALY heterogeneous nuclear ribonucleoprotein20q11.21-q11.23CV:PGCnp
191AHCYSAHH | adoHcyaseadenosylhomocysteinase20q11.22CV:PGCnp
DMG:Wockner_2014
Network
671BPIBPIFD1 | rBPIbactericidal/permeability-increasing protein20q11.23CV:GWAScat
CV:GWASdb
DMG:Wockner_2014
PMID:cooccur
60436TGIF2-TGFB induced factor homeobox 220q11.23CV:PGCnp
DMG:Wockner_2014
57148RALGAPBKIAA1219 | RalGAPbetaRal GTPase activating protein non-catalytic beta subunit20q11.23CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
5335PLCG1NCKAP3 | PLC-II | PLC1 | PLC148 | PLCgamma1phospholipase C gamma 120q12-q13.1CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
958CD40Bp50 | CDW40 | TNFRSF5 | p50CD40 molecule20q12-q13.2CV:GWASdb
CV:PGCnp
PMID:cooccur
655BMP7OP-1bone morphogenetic protein 720q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
1434CSE1LCAS | CSE1 | XPO2CSE1 chromosome segregation 1-like (yeast)20q13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
7529YWHABGW128 | HEL-S-1 | HS1 | KCIP-1 | YWHAAtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta20q13.1CV:PGCnp
DMG:Wockner_2014
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5770PTPN1PTP1Bprotein tyrosine phosphatase, non-receptor type 120q13.1-q13.2CV:PGCnp
Network
PMID:cooccur
90199WFDC8C20orf170 | HEL-S-292 | WAP8 | dJ461P17.1WAP four-disulfide core domain 820q13.12CV:PGCnp
100ADA-adenosine deaminase20q13.12CV:PGCnp
Network
PMID:cooccur
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
23394ADNPADNP1 | HVDAS | MRD28activity-dependent neuroprotector homeobox20q13.13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
55661DDX27DRS1 | Drs1p | HSPC259 | PP3241 | RHLP | dJ686N3.1DEAD-box helicase 2720q13.13CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
8813DPM1CDGIE | MPDSdolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit20q13.13DMG:Wockner_2014
DNM:Fromer_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10564ARFGEF2BIG2 | PVNH2 | dJ1164I10.1ADP ribosylation factor guanine nucleotide exchange factor 220q13.13CV:PGCnpAscano FMRP targets
55905RNF114PSORS12 | ZNF313ring finger protein 11420q13.13DMG:Jaffe_2016
6227RPS21HLDF | S21ribosomal protein S2120q13.3CV:PGCnp
DMG:Nishioka_2013
8480RAE1MIG14 | MRNP41 | Mnrp41 | dJ481F12.3 | dJ800J21.1ribonucleic acid export 120q13.31DMG:Nishioka_2013
11083DIDO1BYE1 | C20orf158 | DATF-1 | DATF1 | DIDO2 | DIDO3 | DIO-1 | DIO1 | dJ885L7.8death inducer-obliterator 120q13.33CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
6874TAF4TAF2C | TAF2C1 | TAF4A | TAFII130 | TAFII135TATA-box binding protein associated factor 420q13.33CV:PGCnp
574BAGEBAGE1 | CT2.1B melanoma antigen21p11.1 not on reference assemblyPMID:cooccur
3454IFNAR1AVP | IFN-alpha-REC | IFNAR | IFNBR | IFRCinterferon alpha and beta receptor subunit 121q22.11CV:PGCnp
DMG:Jaffe_2016
2897GRIK1EAA3 | EEA3 | GLR5 | GLUR5 | GluK1 | gluR-5glutamate ionotropic receptor kainate type subunit 121q22.11CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
10694CCT8C21orf112 | Cctq | D21S246 | PRED71chaperonin containing TCP1 subunit 821q22.11CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2618GARTAIRS | GARS | GARTF | PAIS | PGFT | PRGSphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase21q22.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
539ATP5OATPO | HMC08D05 | OSCPATP synthase, H+ transporting, mitochondrial F1 complex, O subunit21q22.11CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
3150HMGN1HMG14high mobility group nucleosome binding domain 121q22.2CV:PGCnp
10317B3GALT5B3GalT-V | B3GalTx | B3T5 | GLCT5 | beta-1,3-GalTase 5 | beta-3-Gx-T5 | beta3Gal-T5Beta-1,3-galactosyltransferase 521q22.3CV:GWASdb
CV:PGCnp
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
8624PSMG1C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1proteasome (prosome, macropain) assembly chaperone 121q22.3CV:PGCnp
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
23759PPIL2CYC4 | CYP60 | Cyp-60 | UBOX7 | hCyP-60peptidylprolyl isomerase like 222q11.21CV:PGCnp
GSMA_I
7290HIRADGCR1 | TUP1 | TUPLE1histone cell cycle regulator22q11.21CNV:YES
CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
7353UFD1LUFD1ubiquitin fusion degradation 1 like (yeast)22q11.21Association
CNV:YES
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
5902RANBP1HTF9ARAN binding protein 122q11.21Association
CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GR_WM
GSMA_I
Network
PMID:cooccur
8318CDC45CDC45L | CDC45L2 | PORC-PI-1cell division cycle 4522q11.21CNV:YES
CV:PGCnp
GSMA_I
6899TBX1CAFS | CATCH22 | CTHM | DGCR | DGS | DORV | TBX1C | TGA | VCF | VCFST-box 122q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
8940TOP3BTOP3B1topoisomerase (DNA) III beta22q11.22CV:PGCnp
DNM:Xu_2012
GSMA_I
PMID:cooccur
CompositeSet
Ascano FMRP targets
3543IGLL114.1 | AGM2 | CD179b | IGL1 | IGL5 | IGLJ14.1 | IGLL | IGO | IGVPB | VPREB2immunoglobulin lambda like polypeptide 122q11.23CV:GWASdb
CV:PGCnp
CV:PheWAS
GSMA_I
4282MIFGIF | GLIF | MMIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)22q11.23DNM:Fromer_2014
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6634SNRPD3SMD3 | Sm-D3small nuclear ribonucleoprotein D3 polypeptide22q11.23CV:PGCnp
DMG:Nishioka_2013
GSMA_I
25774GSTTP1GSTT4 | HS322B1Aglutathione S-transferase theta pseudogene 122q12CV:PGCnp
23760PITPNBPI-TP-beta | PtdInsTP | VIB1Bphosphatidylinositol transfer protein beta22q12.1CV:PGCnp
Expression
GSMA_I
23481PES1PESpescadillo ribosomal biogenesis factor 122q12.1CV:PGCnp
GSMA_I
Ascano FMRP targets
11200CHEK2CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1checkpoint kinase 222q12.1CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
GSMA_I
2130EWSR1EWS | EWS-FLI1 | bK984G1.4EWS RNA binding protein 122q12.2CV:PGCnp
GSMA_I
Network
5816PVALBD22S749parvalbumin22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
5880RAC2EN-7 | Gx | HSPC022 | p21-Rac2ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)22q13.1CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
468ATF4CREB-2 | CREB2 | TAXREB67 | TXREBactivating transcription factor 422q13.1CV:PGCnp
PMID:cooccur
8664EIF3DEIF3S7 | eIF3-p66 | eIF3-zetaeukaryotic translation initiation factor 3 subunit D22q13.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
158ADSLAMPS | ASASE | ASLadenylosuccinate lyase22q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
25830SULT4A1BR-STL-1 | BRSTL1 | DJ388M5.3 | NST | SULTX3 | hBR-STL-1sulfotransferase family 4A member 122q13.2Association
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
10762NUP50NPAP60 | NPAP60Lnucleoporin 50kDa22q13.31CV:PGCnp
9889ZBED4-zinc finger BED-type containing 422q13.33CV:GWASdb
CV:PGCnp
PMID:cooccur
5600MAPK11P38B | P38BETA2 | PRKM11 | SAPK2 | SAPK2B | p38-2 | p38Betamitogen-activated protein kinase 1122q13.33CV:PGCnp
6942TCF20AR1 | SPBP | TCF-20transcription factor 20 (AR1)22q13.3|22q13.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
9801MRPL19L19mt | MRP-L15 | MRP-L19 | MRPL15 | RLX1 | RPML15mitochondrial ribosomal protein L192p11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
64795RMND5ACTLH | GID2 | GID2A | RMD5 | p44CTLHrequired for meiotic nuclear division 5 homolog A2p11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
22934RPIARPI | RPIADribose 5-phosphate isomerase A2p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3099HK2HKII | HXK2hexokinase 22p13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
5966RELC-Relv-rel avian reticuloendotheliosis viral oncogene homolog2p13-p12CV:GWASdb
CV:PGCnp
CV:PheWAS
Network
PMID:cooccur
5093PCBP1HEL-S-85 | HNRPE1 | HNRPX | hnRNP-E1 | hnRNP-Xpoly(rC) binding protein 12p13-p12CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_TAP-PSD-95-CORE
8446DUSP11PIR1dual specificity phosphatase 112p13.1CV:PGCnp
10797MTHFD2NMDMCmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase2p13.1CV:PGCnp
84759PCGF12010002K04Rik | NSPC1 | RNF3A-2 | RNF68polycomb group ring finger 12p13.1DMG:Jaffe_2016
10574CCT7CCTETA | CCTH | NIP7-1 | TCP1ETAchaperonin containing TCP1 subunit 72p13.2CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
10199MPHOSPH10CT90 | MPP10 | MPP10P | PPP1R106M-phase phosphoprotein 102p13.3CV:PGCnp
DMG:Jaffe_2016
10097ACTR2ARP2ARP2 actin-related protein 2 homolog (yeast)2p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
23177CEP68KIAA0582centrosomal protein 68kDa2p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
56902PNO1KHRBP1 | RRP20partner of NOB1 homolog2p14CV:PGCnp
9736USP34-ubiquitin specific peptidase 342p15CV:PGCnp
Expression
CompositeSet
Darnell FMRP targets
10575CCT4CCT-DELTA | Cctd | SRBchaperonin containing TCP1 subunit 42p15CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
4528MTIF2-mitochondrial translational initiation factor 22p16.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
55120FANCLFAAP43 | PHF9 | POGFanconi anemia complementation group L2p16.1CV:PGCnp
23198PSME4PA200proteasome activator subunit 42p16.2CV:PGCnp
9553MRPL33C2orf1 | L33mt | MRP-L33 | RPL33Lmitochondrial ribosomal protein L332p21CV:PGCnp
5281PIGF-phosphatidylinositol glycan anchor biosynthesis class F2p21-p16CV:PGCnp
PMID:cooccur
790CADCDG1Zcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase2p22-p21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
10153CEBPZCBF | CBF2 | HSP-CBF | NOC1CCAAT/enhancer binding protein zeta2p22.2CV:PGCnp
DMG:Nishioka_2013
LK:YES
Ascano FMRP targets
6801STRNSG2NAstriatin2p22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
84272YIPF4FinGER4 | Nbla11189Yip1 domain family member 42p22.3CV:PGCnp
DEG:Zhao_2015
11321GPN1ATPBD1A | MBDIN | NTPBP | RPAP4 | XAB1GPN-loop GTPase 12p23.3CV:GWASdb
CV:PGCnp
5496PPM1GPP2CG | PP2CGAMMA | PPP2CGprotein phosphatase, Mg2+/Mn2+ dependent 1G2p23.3CV:PGCnp
DMG:vanEijk_2014
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
54454ATAD2B-ATPase family, AAA domain containing 2B2p24.1-p23.3CV:PGCnp
4953ODC1ODCornithine decarboxylase 12p25CV:PGCnp
DMG:Nishioka_2013
246243RNASEH1H1RNA | PEOB2 | RNH1ribonuclease H12p25CV:PGCnp
6868ADAM17ADAM18 | CD156B | CSVP | NISBD | NISBD1 | TACEADAM metallopeptidase domain 172p25CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
91543RSAD22510004L01Rik | cig33 | cig5 | vig1radical S-adenosyl methionine domain containing 22p25.2CV:PGCnp
23397NCAPHBRRN1 | CAP-Hnon-SMC condensin I complex subunit H2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
56910STARD7GTT1StAR related lipid transfer domain containing 72q11.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
23020SNRNP200ASCC3L1 | BRR2 | HELIC2 | RP33 | U5-200KDsmall nuclear ribonucleoprotein U5 subunit 2002q11.2CV:PGCnp
Network
Ascano FMRP targets
1622DBIACBD1 | ACBP | CCK-RP | EPdiazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)2q12-q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
10018BCL2L11BAM | BIM | BODBCL2 like 112q13CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
4867NPHP1JBTS4 | NPH1 | SLSN1nephronophthisis 1 (juvenile)2q13CV:PGCnp
Expression
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
6574SLC20A1GLVR1 | Glvr-1 | PIT1 | PiT-1solute carrier family 20 member 12q13CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
8886DDX18MrDbDEAD-box helicase 182q14.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
Ascano FMRP targets
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
92856IMP4BXDC4IMP4 homolog, U3 small nucleolar ribonucleoprotein2q21.1CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
1615DARSHBSL | aspRSaspartyl-tRNA synthetase2q21.3GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
23518R3HDM1R3HDMR3H domain containing 12q21.3DMG:Nishioka_2013
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
905CCNT2CYCT2cyclin T22q21.3CV:PGCnp
GSMA_I
GSMA_IIA
11249NXPH2NPH2neurexophilin 22q22.1CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
GSMA_IIA
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
55183RIF1-replication timing regulatory factor 12q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
55660PRPF40AFBP-11 | FBP11 | FLAF1 | FNBP3 | HIP-10 | HIP10 | HYPA | NY-REN-6 | Prp40pre-mRNA processing factor 40 homolog A2q23.3CV:PGCnp
Expression
GSMA_IIA
Network
Ascano FMRP targets
10213PSMD14PAD1 | POH1 | RPN11proteasome 26S subunit, non-ATPase 142q24.2CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
10651MTX2-metaxin 22q31.1CV:PGCnp
GO_Annotation
G2Cdb.human_mitochondria
5163PDK1-pyruvate dehydrogenase kinase 12q31.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6741SSBLARP3 | La | La/SSBSjogren syndrome antigen B2q31.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
3236HOXD10HOX4 | HOX4D | HOX4E | Hox-4.4homeobox D102q31.1CV:PGCnp
57405SPC25AD024 | SPBC25 | hSpc25SPC25, NDC80 kinetochore complex component2q31.1CV:GWASdb
CV:PGCnp
GSMA_IIA
5378PMS1HNPCC3 | MLH2 | PMSL1 | hPMS1PMS1 homolog 1, mismatch repair system component2q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8520HAT1KAT1histone acetyltransferase 12q31.2-q33.1CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
1386ATF2CRE-BP1 | CREB-2 | CREB2 | HB16 | TREB7activating transcription factor 22q32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
91752ZNF804AC2orf10zinc finger protein 804A2q32.1Core
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Network
PMID:cooccur
9262STK17BDRAK2serine/threonine kinase 17b2q32.3CV:PGCnp
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
4719NDUFS1CI-75Kd | CI-75k | PRO1304NADH:ubiquinone oxidoreductase core subunit S12q33-q34CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23451SF3B1Hsh155 | MDS | PRP10 | PRPF10 | SAP155 | SF3b155splicing factor 3b subunit 12q33.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
Ascano FMRP targets
3329HSPD1CPN60 | GROEL | HLD4 | HSP-60 | HSP60 | HSP65 | HuCHA60 | SPG13heat shock protein family D (Hsp60) member 12q33.1CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1933EEF1B2EEF1B | EEF1B1 | EF1Beukaryotic translation elongation factor 1 beta 22q33.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
Network
8941CDK5R2NCK5AI | P39 | p39nck5aicyclin-dependent kinase 5, regulatory subunit 2 (p39)2q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
580BARD1-BRCA1 associated RING domain 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
5077PAX3CDHS | HUP2 | WS1 | WS3paired box 32q35CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
10109ARPC2ARC34 | PNAS-139 | PRO2446 | p34-Arcactin related protein 2/3 complex subunit 22q36.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
5757PTMATMSAprothymosin, alpha2q37.1CV:PGCnp
DMG:Jaffe_2016
9470EIF4E24E-LP | 4EHP | EIF4EL3 | IF4eeukaryotic translation initiation factor 4E family member 22q37.1CV:PGCnp
DMG:Jaffe_2016
4691NCLC23nucleolin2q37.1CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
8801SUCLG2GBETAsuccinate-CoA ligase, GDP-forming, beta subunit3p14.1CV:PGCnp
201626PDE122'-PDEphosphodiesterase 123p14.3CV:PGCnp
DMG:Wockner_2014
7086TKTHEL-S-48 | HEL107 | TK | TKT1transketolase3p14.3CV:PGCnp
DMG:Wockner_2014
Network
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
10425ARIH2ARI2 | TRIAD1ariadne RBR E3 ubiquitin protein ligase 23p21CV:PGCnp
Network
5162PDHBPDHBD | PDHE1-B | PHE1Bpyruvate dehydrogenase (lipoamide) beta3p21.1-p14.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10039PARP3ADPRT3 | ADPRTL2 | ADPRTL3 | ARTD3 | IRT1 | PADPRT-3poly(ADP-ribose) polymerase family member 33p21.2CV:PGCnp
DMG:Nishioka_2013
3615IMPDH2IMPD2 | IMPDH-IIIMP (inosine 5'-monophosphate) dehydrogenase 23p21.2CV:PGCnp
23395LARS2LEURS | PRLTS4 | mtLeuRSleucyl-tRNA synthetase 2, mitochondrial3p21.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7866IFRD2IFNRP | SKMc15 | SM15interferon-related developmental regulator 23p21.3CV:PGCnp
DMG:Wockner_2014
9941EXOGENDOGL1 | ENDOGL2 | ENGL | ENGL-a | ENGL-b | ENGLA | ENGLBendo/exonuclease (5'-3'), endonuclease G-like3p21.3CV:PGCnp
GSMA_I
11186RASSF1123F2 | NORE2A | RASSF1A | RDA32 | REH3P21Ras association domain family member 13p21.3CV:PGCnp
DMG:vanEijk_2014
10869USP19ZMYND9ubiquitin specific peptidase 193p21.31CV:PGCnpAscano FMRP targets
93ACVR2BACTRIIB | ActR-IIB | HTX4activin A receptor type 2B3p22CV:PGCnp
GSMA_I
9943OXSR1OSR1oxidative stress responsive 13p22.2CV:PGCnp
GSMA_I
PMID:cooccur
7155TOP2BTOPIIB | top2betatopoisomerase (DNA) II beta3p24CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
80852GRIP2-glutamate receptor interacting protein 23p24-p23CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
23180RFTN1MIG2 | PIB10 | PIG9 | RAFTLINraftlin, lipid raft linker 13p24.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
Ascano FMRP targets
27258LSM3SMX4 | USS2 | YLR438CLSM3 homolog, U6 small nuclear RNA and mRNA degradation associated3p25.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
CompositeSet
6533SLC6A6TAUTsolute carrier family 6 member 63p25.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_I
CELL METABOLISM
23225NUP210GP210 | POM210nucleoporin 210kDa3p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
CompositeSet
9797TATDN2-TatD DNase domain containing 23p25.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7428VHLHRCA1 | RCA1 | VHL1 | pVHLvon Hippel-Lindau tumor suppressor3p25.3CV:PGCnp
Network
PMID:cooccur
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
10225CD96TACTILECD96 molecule3q13.13-q13.2CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
29114TAGLN3NP22 | NP24 | NP25transgelin 33q13.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_IIA
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
9657IQCB1NPHP5 | PIQ | SLSN5IQ motif containing B13q13.33|3q21.1CV:PGCnp
7555CNBPCNBP1 | DM2 | PROMM | RNF163 | ZCCHC22 | ZNF9CCHC-type zinc finger, nucleic acid binding protein3q21CV:PGCnp
Network
8607RUVBL1ECP-54 | ECP54 | INO80H | NMP 238 | NMP238 | PONTIN | Pontin52 | RVB1 | TIH1 | TIP49 | TIP49ARuvB like AAA ATPase 13q21CV:PGCnp
4690NCK1NCK | NCKalpha | nck-1NCK adaptor protein 13q21CV:PGCnp
GO_Annotation
Network
5096PCCB-propionyl-CoA carboxylase beta subunit3q21-q22CV:PGCnp
DMG:Jaffe_2016
11222MRPL3COXPD9 | MRL3 | RPML3mitochondrial ribosomal protein L33q21-q23CV:PGCnp
2960GTF2E1FE | TF2E1 | TFIIE-Ageneral transcription factor IIE subunit 13q21-q24CV:PGCnp
DEG:Zhao_2015
8930MBD4MED1methyl-CpG binding domain 4 DNA glycosylase3q21.3PMID:cooccurChromatin Remodeling Genes
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
8419BFSP2CP47 | CP49 | CTRCT12 | LIFL-L | PHAKOSINbeaded filament structural protein 23q22.1CV:PGCnp
5291PIK3CBP110BETA | PI3K | PI3KBETA | PIK3C1phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta3q22.3CV:PGCnp
DNM:Girard_2011
Network
CompositeSet
483ATP1B3ATPB-3 | CD298ATPase Na+/K+ transporting subunit beta 33q23CV:PGCnp
DMG:Wockner_2014
545ATRFCTCS | FRP1 | MEC1 | SCKL | SCKL1ATR serine/threonine kinase3q23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
4154MBNL1EXP | MBNLmuscleblind like splicing regulator 13q25CV:PGCnp
GO_Annotation
PMID:cooccur
11235PDCD10CCM3 | TFAR15programmed cell death 103q26.1CV:PGCnp
6434TRA2BHtra2-beta | PPP1R156 | SFRS10 | SRFS10 | TRA2-BETA | TRAN2Btransformer 2 beta homolog (Drosophila)3q26.2-q27CV:PGCnp
6657SOX2ANOP3 | MCOPS3SRY-box 23q26.33Expression
PMID:cooccur
55669MFN1hfzo1 | hfzo2mitofusin 13q26.33DMG:Wockner_2014
86ACTL6AACTL6 | ARPN-BETA | Arp4 | BAF53A | INO80Kactin like 6A3q26.33CV:PGCnp
DMG:Jaffe_2016
23200ATP11BATPIF | ATPIRATPase phospholipid transporting 11B (putative)3q27CV:PGCnp
DMG:Jaffe_2016
8893EIF2B5CACH | CLE | EIF-2B | EIF2Bepsilon | LVWMeukaryotic translation initiation factor 2B subunit epsilon3q27.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
5437POLR2HRPABC3 | RPB17 | RPB8polymerase (RNA) II subunit H3q28DMG:Jaffe_2016
5130PCYT1ACCTA | CT | CTA | CTPCT | PCYT1 | SMDCRDphosphate cytidylyltransferase 1, choline, alpha3q29CNV:YES
CV:PGCnp
5504PPP1R2IPP-2 | IPP2protein phosphatase 1 regulatory inhibitor subunit 23q29CV:PGCnp
PMID:cooccur
7037TFRCCD71 | IMD46 | T9 | TFR | TFR1 | TR | TRFR | p90transferrin receptor3q29CNV:YES
CV:PGCnp
Network
PMID:cooccur
22916NCBP2CBC2 | CBP20 | NIP1 | PIG55nuclear cap binding protein subunit 23q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
5062PAK2PAK65 | PAKgammap21 protein (Cdc42/Rac)-activated kinase 23q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
7006TECPSCTK4tec protein tyrosine kinase4p12CV:PGCnp
PMID:cooccur
8929PHOX2BNBLST2 | NBPhox | PMX2Bpaired like homeobox 2b4p12Association
CV:PGCnp
GO_Annotation
PMID:cooccur
23216TBC1D1TBC | TBC1TBC1 domain family member 14p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
23244PDS5APIG54 | SCC-112 | SCC112PDS5 cohesin associated factor A4p14CV:PGCnp
3093UBE2KE2-25K | HIP2 | HYPG | LIG | UBC1ubiquitin conjugating enzyme E2 K4p14CV:PGCnp
PMID:cooccur
952CD38ADPRC 1 | ADPRC1CD38 molecule4p15Association
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
23231SEL1L3Sel-1L3SEL1L family member 34p15.2CV:PGCnp
CV:PheWAS
9364RAB28CORD18RAB28, member RAS oncogene family4p15.33CV:PGCnp
DMG:Nishioka_2013
2580GAKDNAJ26 | DNAJC26cyclin G associated kinase4p16CV:PGCnpAscano FMRP targets
8602NOP14C4orf9 | NOL14 | RES4-25 | RES425 | UTP2NOP14 nucleolar protein4p16.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Ascano FMRP targets
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
6731SRP72BMFF | BMFS1 | HEL103signal recognition particle 72kDa4q11CV:PGCnp
DMG:Jaffe_2016
9662CEP135CEP4 | KIAA0635 | MCPH8centrosomal protein 135kDa4q12CV:PGCnp
DMG:Jaffe_2016
10606PAICSADE2 | ADE2H1 | AIRC | PAISphosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase4q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2044EPHA5CEK7 | EHK-1 | EHK1 | EK7 | HEK7 | TYRO4EPH receptor A54q13.1CV:PGCnp
CV:PheWAS
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
5470PPEF2PPP7CBprotein phosphatase with EF-hand domain 24q21.1CV:PGCnp
PMID:cooccur
9429ABCG2ABC15 | ABCP | BCRP | BCRP1 | BMDP | CD338 | CDw338 | EST157481 | GOUT1 | MRX | MXR | MXR-1 | MXR1 | UAQTL1ATP binding cassette subfamily G member 2 (Junior blood group)4q22CV:PGCnp
DMG:Jaffe_2016
23173METAP1MAP1A | MetAP1Amethionyl aminopeptidase 14q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
7323UBE2D3E2(17)KB3 | UBC4/5 | UBCH5Cubiquitin conjugating enzyme E2 D34q24CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
6870TACR3HH11 | NK-3R | NK3R | NKR | TAC3RLtachykinin receptor 34q25CV:PGCnp
PMID:cooccur
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
8467SMARCA5ISWI | SNF2H | WCRF135 | hISWI | hSNF2HSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 54q31.1-q31.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
23240KIAA0922TMEM131LKIAA09224q31.3CV:GWASdb
CV:PGCnp
Ascano FMRP targets
1519CTSOCTSO1cathepsin O4q32.1CV:PGCnp
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
8001GLRA3-glycine receptor alpha 34q34.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
8819SAP30-Sin3A associated protein 30kDa4q34.1CV:PGCnp
DEG:Maycox_2009
3660IRF2IRF-2interferon regulatory factor 24q35.1CV:PGCnp
DMG:Jaffe_2016
23530NNTGCCD4nicotinamide nucleotide transhydrogenase5p12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
6167RPL37L37ribosomal protein L375p13CV:GWASdb
CV:PGCnp
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
6897TARSThrRSthreonyl-tRNA synthetase5p13.2CV:PGCnp
PMID:cooccur
51663ZFRSPG71 | ZFR1zinc finger RNA binding protein5p13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
4726NDUFS6CI-13kA | CI-13kD-A | CI13KDANADH:ubiquinone oxidoreductase subunit S65p15.33CV:PGCnp
DMG:Jaffe_2016
3796KIF2ACDCBM3 | HK2 | KIF2kinesin heavy chain member 2A5q12-q13Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
1022CDK7CAK1 | CDKN7 | HCAK | MO15 | STK1 | p39MO15cyclin-dependent kinase 75q12.1GO_Annotation
27292DIMT1DIM1 | DIMT1L | HSA9761 | HUSSY5DIM1 dimethyladenosine transferase 1 homolog5q12.1CV:PGCnp
DMG:Jaffe_2016
25859PART1NCRNA00206prostate androgen-regulated transcript 1 (non-protein coding)5q12.1CV:PGCnp
6880TAF9MGC:5067 | STAF31/32 | TAF2G | TAFII-31 | TAFII-32 | TAFII31 | TAFII32 | TAFIID32TATA-box binding protein associated factor 95q13.2DNM:Fromer_2014CompositeSet
3156HMGCRLDLCQ33-hydroxy-3-methylglutaryl-CoA reductase5q13.3-q14CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
8546AP3B1ADTB3 | ADTB3A | HPS | HPS2 | PEadaptor related protein complex 3 beta 1 subunit5q14.1CV:PGCnp
DMG:Jaffe_2016
6902TBCA-tubulin folding cofactor A5q14.1CV:PGCnp
DMG:Jaffe_2016
6228RPS23S23ribosomal protein S235q14.2CV:PGCnp
10622POLR3GRPC32 | RPC7polymerase (RNA) III subunit G5q14.3CV:PGCnp
1070CETN3CDC31 | CEN3centrin 35q14.3CV:PGCnp
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
9140ATG12APG12 | APG12L | FBR93 | HAPG12autophagy related 125q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
25816TNFAIP8GG2-1 | MDC-3.13 | NDED | SCC-S2 | SCCS2TNF alpha induced protein 85q23.1CV:PGCnp
DMG:Wockner_2014
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
995CDC25CCDC25 | PPP1R60cell division cycle 25C5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
56137PCDHA12PCDH-ALPHA12protocadherin alpha 125q31CV:PGCnp
GSMA_I
8841HDAC3HD3 | RPD3 | RPD3-2histone deacetylase 35q31GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
7416VDAC1PORIN | VDAC-1voltage dependent anion channel 15q31CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_I
Network
PMID:cooccur
EXCITABILITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
10915TCERG1CA150 | TAF2S | Urn1transcription elongation regulator 15q31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
GSMA_IIE
9337CNOT8CAF1 | CALIF | Caf1b | POP2 | hCAF1CCR4-NOT transcription complex subunit 85q31-q33CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
3565IL4BCGF-1 | BCGF1 | BSF-1 | BSF1 | IL-4interleukin 45q31.1Association
CV:PGCnp
GR_COR
GR_WM
GSMA_I
PMID:cooccur
9555H2AFYH2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2H2A histone family member Y5q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
2107ETF1D5S1995 | ERF | ERF1 | RF1 | SUP45L1 | TB3-1eukaryotic translation termination factor 15q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
Expression
GSMA_I
Network
3313HSPA9CRP40 | CSA | EVPLS | GRP-75 | GRP75 | HEL-S-124m | HSPA9B | MOT | MOT2 | MTHSP75 | PBP74 | SAANheat shock protein family A (Hsp70) member 95q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
9782MATR3ALS21 | MPD2 | VCPDMmatrin 35q31.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
Network
7322UBE2D2E2(17)KB2 | PUBC1 | UBC4 | UBC4/5 | UBCH4 | UBCH5Bubiquitin conjugating enzyme E2 D25q31.2CV:PGCnp
GSMA_I
9542NRG2DON1 | HRG2 | NTAKneuregulin 25q31.2Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_WM
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
3094HINT1HINT | NMAN | PKCI-1 | PRKCNH1histidine triad nucleotide binding protein 15q31.2DMG:Wockner_2014
Expression
GR_WM
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
5145PDE6ACGPR-A | PDEA | RP43phosphodiesterase 6A5q31.2-q34CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
4238MFAP3-microfibrillar associated protein 35q32-q33.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
206358SLC36A1Dct1 | LYAAT1 | PAT1 | TRAMD3solute carrier family 36 member 15q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
10146G3BP1G3BP | HDH-VIIIG3BP stress granule assembly factor 15q33.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
9685CLINT1CLINT | ENTH | EPN4 | EPNRclathrin interactor 15q33.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
8728ADAM19FKSG34 | MADDAM | MLTNBADAM metallopeptidase domain 195q33.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
8817FGF18FGF-18 | ZFGF5fibroblast growth factor 185q34Association
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
2870GRK6GPRK6G protein-coupled receptor kinase 65q35CV:PGCnp
GSMA_IIA
PMID:cooccur
662BNIP1NIP1 | SEC20 | TRG-8BCL2/adenovirus E1B 19kDa interacting protein 15q35.1CV:PGCnp
GO_Annotation
GSMA_IIA
4869NPM1B23 | NPMnucleophosmin (nucleolar phosphoprotein B23, numatrin)5q35.1CV:PGCnp
GSMA_IIA
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
5917RARSArgRS | DALRD1 | HLD9arginyl-tRNA synthetase5q35.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
PMID:cooccur
1794DOCK2IMD40dedicator of cytokinesis 25q35.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
51491NOP16HSPC111 | HSPC185NOP16 nucleolar protein5q35.2CV:PGCnp
55651NHP2DKCB2 | NHP2P | NOLA2NHP2 ribonucleoprotein5q35.3CV:PGCnp
DMG:Wockner_2014
3182HNRNPABABBP1 | HNRPABheterogeneous nuclear ribonucleoprotein A/B5q35.3CV:GWASdb
CV:PGCnp
3187HNRNPH1HNRPH | HNRPH1 | hnRNPHheterogeneous nuclear ribonucleoprotein H1 (H)5q35.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
5626PROP1CPHD2 | PROP-1PROP paired-like homeobox 15q35.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
23607CD2APCMSCD2-associated protein6p12CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
81578COL21A1COLA1L | FP633collagen type XXI alpha 16p12.3-p11.2|6p12.3-p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
3159HMGA1HMG-R | HMGA1A | HMGIYhigh mobility group AT-hook 16p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
896CCND3-cyclin D36p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
Network
387032ZKSCAN4P1P373C6 | ZNF307 | ZNF427 | ZSCAN36zinc finger with KRAB and SCAN domains 46p21CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
705BYSLBYSTINbystin like6p21.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
23113CUL9H7AP1 | PARCcullin 96p21.1CV:GWASdb
CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
24149ZNF318HRIHFB2436 | TZF | ZFP318zinc finger protein 3186p21.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIE
9533POLR1CAC40 | HLD11 | RPA39 | RPA40 | RPA5 | RPAC1 | RPC40 | TCS3polymerase (RNA) I subunit C6p21.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
3111HLA-DOAHLA-DNA | HLA-DZA | HLADZmajor histocompatibility complex, class II, DO alpha6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
8449DHX16DBP2 | DDX16 | PRO2014 | PRP8 | PRPF2 | Prp2DEAH-box helicase 166p21.3CV:GWASdb
GSMA_I
1616DAXXBING2 | DAP6 | EAP1death-domain associated protein6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
7738ZNF184kr-ZNF3zinc finger protein 1846p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
11074TRIM31C6orf13 | HCG1 | HCGI | RNFtripartite motif containing 316p21.3CV:GWASdb
CV:PGCnp
GSMA_I
2968GTF2H4P52 | TFB2 | TFIIHgeneral transcription factor IIH subunit 46p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10471PFDN6H2-KE2 | HKE2 | KE-2 | PFD6prefoldin subunit 66p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10473HMGN4HMG17L3 | NHChigh mobility group nucleosomal binding domain 46p21.3CV:PGCnp
GSMA_I
4277MICBPERB11.2MHC class I polypeptide-related sequence B6p21.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_COR
GR_WM
GSMA_I
PMID:cooccur
7407VARSG7A | VARS1 | VARS2valyl-tRNA synthetase6p21.3CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
4295MLN-motilin6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
7124TNFDIF | TNF-alpha | TNFA | TNFSF2 | TNLG1Ftumor necrosis factor6p21.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
57819LSM2C6orf28 | G7B | YBL026W | snRNPLSM2 homolog, U6 small nuclear RNA and mRNA degradation associated6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
4049LTALT | TNFB | TNFSF1 | TNLG1Elymphotoxin alpha6p21.3Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
5696PSMB8ALDD | D6S216 | D6S216E | JMP | LMP7 | NKJO | PSMB5i | RING10proteasome subunit beta 86p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
28973MRPS18BC6orf14 | HSPC183 | HumanS18a | MRP-S18-2 | MRPS18-2 | PTD017 | S18amtmitochondrial ribosomal protein S18B6p21.3DMG:Jaffe_2016
GSMA_I
6732SRPK1SFRSK1SRSF protein kinase 16p21.31CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIE
6882TAF11MGC:15243 | PRO2134 | TAF2I | TAFII28TATA-box binding protein associated factor 116p21.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIE
6631SNRPCU1C | Yhc1small nuclear ribonucleoprotein polypeptide C6p21.31CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
7915ALDH5A1SSADH | SSDHaldehyde dehydrogenase 5 family member A16p22CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
5987TRIM27RFP | RNF76tripartite motif containing 276p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
1871E2F3E2F-3E2F transcription factor 36p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8354HIST1H3IH3.f | H3/f | H3FFhistone cluster 1, H3i6p22.1CV:PGCnp
GSMA_I
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8368HIST1H4LH4.k | H4/k | H4FKhistone cluster 1, H4l6p22.1CV:PGCnp
GSMA_I
81688C6orf62Nbla00237 | XTP12 | dJ30M3.2chromosome 6 open reading frame 626p22.3CV:PGCnp
GSMA_I
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
55856ACOT13HT012 | PNAS-27 | THEM2acyl-CoA thioesterase 136p22.3CV:PGCnp
GSMA_I
9972NUP153HNUP153 | N153nucleoporin 153kDa6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
10048RANBP9BPM-L | BPM90 | RANBPM | RanBP7RAN binding protein 96p23CV:PGCnp
GSMA_I
Network
PMID:cooccur
3720JARID2JMJjumonji and AT-rich interaction domain containing 26p24-p23Association
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Ascano FMRP targets
Chromatin Remodeling Genes
6239RREB1FINB | HNT | LZ321 | RREB-1 | Zep-1ras responsive element binding protein 16p25CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
10799RPP40RNASEP1 | bA428J1.3ribonuclease P/MRP 40kDa subunit6p25.1CV:PGCnp
GSMA_I
8899PRPF4BPR4H | PRP4 | PRP4H | PRP4K | dJ1013A10.1pre-mRNA processing factor 4B6p25.2CV:PGCnp
GSMA_I
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
4199ME1HUMNDME | MESmalic enzyme 1, NADP(+)-dependent, cytosolic6q12CV:PGCnp
22999RIMS1CORD7 | RAB3IP2 | RIM | RIM1regulating synaptic membrane exocytosis 16q12-q13CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
51020HDDC2C6orf74 | CGI-130 | NS5ATP2 | dJ167O5.2HD domain containing 26q13-q24.3CV:PGCnp
DMG:Wockner_2014
10492SYNCRIPGRY-RBP | GRYRBP | HNRNPQ | HNRPQ1 | NSAP1 | PP68 | hnRNP-Qsynaptotagmin binding, cytoplasmic RNA interacting protein6q14-q15CV:PGCnp
1915EEF1A1CCS-3 | CCS3 | EE1A1 | EEF-1 | EEF1A | EF-Tu | EF1A | GRAF-1EF | HNGC:16303 | LENG7 | PTI1 | eEF1A-1eukaryotic translation elongation factor 1 alpha 16q14.1CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9324HMGN3PNAS-24 | PNAS-25 | TRIP7high mobility group nucleosomal binding domain 36q14.1CV:PGCnp
DMG:Wockner_2014
51465UBE2J1CGI-76 | HSPC153 | HSPC205 | HSU93243 | NCUBE-1 | NCUBE1 | UBC6 | UBC6E | Ubc6pubiquitin conjugating enzyme E2 J16q15CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
8732RNGTTCAP1A | HCE | HCE1 | hCAPRNA guanylyltransferase and 5'-phosphatase6q16CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
6492SIM1bHLHe14single-minded family bHLH transcription factor 16q16.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
3066HDAC2HD2 | RPD3 | YAF1histone deacetylase 26q21DMG:Wockner_2014
Network
PMID:cooccur
Chromatin Remodeling Genes
285755PPIL6PPIase | RSPH12 | bA425D10.6 | dJ919F19.1peptidylprolyl isomerase like 66q21CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
25842ASF1ACGI-98 | CIA | HSPC146anti-silencing function 1A histone chaperone6q22.31CV:PGCnpChromatin Remodeling Genes
2911GRM1GPRC1A | MGLU1 | MGLUR1 | PPP1R85 | SCAR13glutamate receptor, metabotropic 16q24CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
7957EPM2AEPM2 | MELFepilepsy, progressive myoclonus type 2A, Lafora disease (laforin)6q24CV:PGCnp
PMID:cooccur
9589WTAPMum2Wilms tumor 1 associated protein6q25-q27CV:PGCnp
5110PCMT1PIMTprotein-L-isoaspartate (D-aspartate) O-methyltransferase6q25.1CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
39ACAT2-acetyl-CoA acetyltransferase 26q25.3CV:PGCnp
PMID:cooccur
6950TCP1CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alphat-complex 16q25.3-q26Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6908TBPGTF2D | GTF2D1 | HDL4 | SCA17 | TFIIDTATA-box binding protein6q27Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
23480SEC61GSSS1Sec61 translocon gamma subunit7p11.2CV:PGCnp
DMG:Jaffe_2016
908CCT6ACCT-zeta | CCT-zeta-1 | CCT6 | Cctz | HTR3 | MoDP-2 | TCP-1-zeta | TCP20 | TCPZ | TTCP20chaperonin containing TCP1 subunit 6A7p11.2CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10320IKZF1Hs.54452 | IK1 | IKAROS | LYF1 | LyF-1 | PPP1R92 | PRO0758 | ZNFN1A1IKAROS family zinc finger 17p12.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GO_Annotation
5425POLD2-polymerase (DNA) delta 2, accessory subunit7p13CV:PGCnp
DMG:Wockner_2014
5478PPIACYPA | CYPH | HEL-S-69ppeptidylprolyl isomerase A7p13CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
8621CDK13CDC2L | CDC2L5 | CHED | hCDK13cyclin-dependent kinase 137p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
5683PSMA2HC3 | MU | PMSA2 | PSC2proteasome subunit alpha 27p13CV:PGCnp
Expression
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
1395CRHR2CRF-RB | CRF2 | CRFR2 | HM-CRFcorticotropin releasing hormone receptor 27p14.3CV:PGCnp
PMID:cooccur
GPCR SIGNALLING
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
26031OSBPL3ORP-3 | ORP3 | OSBP3oxysterol binding protein like 37p15CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3181HNRNPA2B1HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1heterogeneous nuclear ribonucleoprotein A2/B17p15CV:PGCnp
11097NUPL2CG1 | NLP-1 | NLP_1 | hCG1nucleoporin like 27p15CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3624INHBAEDF | FRPinhibin beta A7p15-p13CV:PGCnp
GO_Annotation
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
29896TRA2AAWMS1 | HSU53209transformer 2 alpha homolog (Drosophila)7p15.3CV:PGCnp
DMG:Nishioka_2013
4521NUDT1MTH1nudix hydrolase 17p22CV:PGCnp
LK:YES
60ACTBBRWS1 | PS1TP5BP1actin, beta7p22CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Darnell FMRP targets
8662EIF3BEIF3-ETA | EIF3-P110 | EIF3-P116 | EIF3S9 | PRT1eukaryotic translation initiation factor 3 subunit B7p22.3CV:PGCnp
DNM:Guipponi_2014
Ascano FMRP targets
27297CRCPCGRP-RCP | CGRPRCP | RCP | RCP9CGRP receptor component7q11.21CV:PGCnp
DEG:Zhao_2015
9883POM121P145 | POM121APOM121 transmembrane nucleoporin7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
9275BCL7B-B-cell CLL/lymphoma 7B7q11.23CNV:YES
7458EIF4HWBSCR1 | WSCR1 | eIF-4Heukaryotic translation initiation factor 4H7q11.23CNV:YES
CV:PGCnp
5982RFC2RFC40replication factor C subunit 27q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
9031BAZ1BWBSCR10 | WBSCR9 | WSTFbromodomain adjacent to zinc finger domain 1B7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
53616ADAM22ADAM 22 | MDC2ADAM metallopeptidase domain 227q21CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
51593SRRTARS2 | ASR2 | serrateserrate, RNA effector molecule7q21CV:PGCnp
PMID:cooccur
Ascano FMRP targets
223117SEMA3DSema-Z2 | coll-2semaphorin 3D7q21.11CV:PGCnp
GO_Annotation
PMID:cooccur
1595CYP51A1CP51 | CYP51 | CYPL1 | LDM | P450-14DM | P450L1cytochrome P450 family 51 subfamily A member 17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
7979SHFM1DSS1 | ECD | SEM1 | SHFD1 | SHSF1 | Shfdg1split hand/foot malformation (ectrodactyly) type 17q21.3CV:PGCnp
PMID:cooccur
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
5001ORC5ORC5L | ORC5P | ORC5T | PPP1R117origin recognition complex subunit 57q22.1CV:PGCnp
80228ORAI2C7orf19 | CBCIP2 | MEM142B | TMEM142BORAI calcium release-activated calcium modulator 27q22.1CV:PGCnp
5701PSMC2MSS1 | Nbla10058 | S7proteasome 26S subunit, ATPase 27q22.1-q22.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Guipponi_2014
54556ING3Eaf4 | ING2 | MEAF4 | p47ING3inhibitor of growth family member 37q31CV:PGCnp
1738DLDDLDD | DLDH | E3 | GCSL | LAD | PHE3dihydrolipoamide dehydrogenase7q31-q32CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3663IRF5SLEB10interferon regulatory factor 57q32CV:PGCnp
PMID:cooccur
5078PAX4KPD | MODY9paired box 47q32CV:PGCnp
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
673BRAFB-RAF1 | BRAF1 | NS7 | RAFB1B-Raf proto-oncogene, serine/threonine kinase7q34CV:PGCnp
DMG:Wockner_2014
Network
CANABINOID
DOPAMINE
SEROTONIN
6742SSBP1Mt-SSB | SOSS-B1 | SSBP | mtSSBsingle-stranded DNA binding protein 1, mitochondrial7q34DMG:Nishioka_2013
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
6469SHHHHG1 | HLP3 | HPE3 | MCOPCB5 | SMMCI | TPT | TPTPSsonic hedgehog7q36CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
22976PAXIP1CAGF28 | CAGF29 | PACIP1 | PAXIP1L | PTIP | TNRC2PAX interacting protein 17q36CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
8454CUL1-cullin 17q36.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
27257LSM1CASM | YJL124CLSM1 homolog, mRNA degradation associated8p11.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
9070ASH2LASH2 | ASH2L1 | ASH2L2 | Bre2ash2 (absent, small, or homeotic)-like (Drosophila)8p11.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
3620IDO1IDO | IDO-1 | INDOindoleamine 2,3-dioxygenase 18p11.21PMID:cooccur
2961GTF2E2FE | TF2E2 | TFIIE-Bgeneral transcription factor IIE subunit 28p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
7486WRNRECQ3 | RECQL2 | RECQL3Werner syndrome RecQ like helicase8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
2936GSRHEL-75 | HEL-S-122mglutathione reductase8p21.1CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
55756INTS9CPSF2L | INT9 | RC74integrator complex subunit 98p21.1CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
5533PPP3CCCALNA3 | CNA3 | PP2Bgammaprotein phosphatase 3 catalytic subunit gamma8p21.3Association
Core
CV:PGCnp
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
55174INTS10C8orf35 | INT10integrator complex subunit 108p21.3CV:PGCnp
DNM:Xu_2012
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
9NAT1AAC1 | MNAT | NAT-1 | NATIN-acetyltransferase 1 (arylamine N-acetyltransferase)8p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
640BLKMODY11BLK proto-oncogene, Src family tyrosine kinase8p23-p22CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
2222FDFT1DGPT | ERG9 | SQS | SSfarnesyl-diphosphate farnesyltransferase 18p23.1-p22CV:PGCnp
DMG:Jaffe_2016
157697ERICH1HSPC319glutamate rich 18p23.3CV:PGCnp
DMG:Wockner_2014
9821RB1CC1ATG17 | CC1 | FIP200 | PPP1R131RB1 inducible coiled-coil 18q11CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
5591PRKDCDNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | IMD26 | XRCC7 | p350protein kinase, DNA-activated, catalytic polypeptide8q11CV:PGCnp
DMG:vanEijk_2014
DNM:McCarthy_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
6917TCEA1GTF2S | SII | TCEA | TF2S | TFIIStranscription elongation factor A18q11.2CV:PGCnp
DMG:Jaffe_2016
51606ATP6V1HCGI-11 | MSTP042 | NBP1 | SFD | SFDalpha | SFDbeta | VMA13ATPase H+ transporting V1 subunit H8q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8439NSMAFFAN | GRAMD5neutral sphingomyelinase activation associated factor8q12.1CV:PGCnp
DMG:Jaffe_2016
8836GGHGHgamma-glutamyl hydrolase8q12.3CV:PGCnp
DMG:Jaffe_2016
23212RRS1-ribosome biogenesis regulator homolog8q13.1CV:PGCnp
4683NBNAT-V1 | AT-V2 | ATV | NBS | NBS1 | P95nibrin8q21CV:PGCnp
6129RPL7L7 | humL7-1ribosomal protein L78q21.11CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
6921TCEB1SIII | eloCtranscription elongation factor B subunit 18q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2171FABP5E-FABP | EFABP | KFABP | PA-FABP | PAFABPfatty acid binding protein 58q21.13CV:GWASdb
CV:PGCnp
Expression
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
3612IMPA1IMP | IMPAinositol(myo)-1(or 4)-monophosphatase 18q21.13-q21.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9791PTDSS1LMHD | PSS1 | PSSAphosphatidylserine synthase 18q22CV:PGCnp
6156RPL30L30ribosomal protein L308q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
51366UBR5DD5 | EDD | EDD1 | HYDubiquitin protein ligase E3 component n-recognin 58q22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3646EIF3EEIF3-P48 | EIF3S6 | INT6 | eIF3-p46eukaryotic translation initiation factor 3 subunit E8q22-q23CV:PGCnp
DMG:Jaffe_2016
Network
92140MTDH3D3 | AEG-1 | AEG1 | LYRIC | LYRIC/3D3metadherin8q22.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
26986PABPC1PAB1 | PABP | PABP1 | PABPC2 | PABPL1poly(A) binding protein, cytoplasmic 18q22.2-q23CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
51582AZIN1AZI | AZIA1 | OAZI | OAZIN | ODC1Lantizyme inhibitor 18q22.3CV:PGCnp
DMG:Jaffe_2016
5820PVT1LINC00079 | NCRNA00079 | onco-lncRNA-100Pvt1 oncogene (non-protein coding)8q24CV:PGCnp
DMG:Wockner_2014
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
6713SQLE-squalene epoxidase8q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8667EIF3HEIF3S3 | eIF3-gamma | eIF3-p40eukaryotic translation initiation factor 3 subunit H8q24.11CV:PGCnp
Network
9897KIAA0196RTSC | RTSC1 | SPG8KIAA01968q24.13CV:PGCnp
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
58500ZNF250ZFP647 | ZNF647zinc finger protein 2508q24.3CV:PGCnp
8629JRKJH8 | jerkyJrk helix-turn-helix protein8q24.3CV:PGCnp
23237ARCArg3.1activity-regulated cytoskeleton-associated protein8q24.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
573BAG1BAG-1 | HAP | RAP46BCL2 associated athanogene 19p12CV:PGCnp
Expression
PMID:cooccur
5079PAX5ALL3 | BSAPpaired box 59p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
27240SIT1SIT | SIT-Rsignaling threshold regulating transmembrane adaptor 19p13-p12CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
30968STOML2HSPC108 | SLP-2stomatin like 29p13.1CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
8434RECKST15reversion inducing cysteine rich protein with kazal motifs9p13.3CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
4799NFX1NFX2 | TEG-42 | Tex42nuclear transcription factor, X-box binding 19p13.3CV:PGCnp
4507MTAPBDMF | DMSFH | DMSMFH | HEL-249 | LGMBF | MSAP | c86fusmethylthioadenosine phosphorylase9p21CV:PGCnp
3440IFNA2IFN-alphaA | IFNA | IFNA2B | INFA2interferon, alpha 29p22CV:PGCnp
PMID:cooccur
11168PSIP1DFS70 | LEDGF | PAIP | PSIP2 | p52 | p75PC4 and SFRS1 interacting protein 19p22.3CV:PGCnp
3376IARSIARS1 | ILERS | ILRS | IRS | PRO0785isoleucyl-tRNA synthetase9q21CV:PGCnp
2395FXNCyaY | FA | FARR | FRDA | X25frataxin9q21.11CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
23137SMC5SMC5L1structural maintenance of chromosomes 59q21.12CV:PGCnp
6850SYKp72-Sykspleen tyrosine kinase9q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
2176FANCCFA3 | FAC | FACCFanconi anemia complementation group C9q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Ascano FMRP targets
23196FAM120AC9orf10 | DNAPTP1 | DNAPTP5 | OSSAfamily with sequence similarity 120A9q22.31CV:PGCnpCompositeSet
Darnell FMRP targets
9830TRIM14-tripartite motif containing 149q22.33CV:PGCnp
DMG:Wockner_2014
27130INVSINV | NPH2 | NPHP2inversin9q31CV:PGCnp
DMG:Jaffe_2016
9128PRPF4HPRP4 | HPRP4P | PRP4 | Prp4p | RP70 | SNRNP60pre-mRNA processing factor 49q31-q33CV:PGCnp
Network
Ascano FMRP targets
23245ASTN2bA67K19.1astrotactin 29q33.1CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
11064CNTRLCEP1 | CEP110 | FAN | bA165P4.1centriolin9q33.2CV:PGCnp
5537PPP6CPP6 | PP6Cprotein phosphatase 6 catalytic subunit9q33.3CV:PGCnp
DMG:Nishioka_2013
Expression
6136RPL12L12ribosomal protein L129q34CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1861TOR1ADQ2 | DYT1torsin family 1 member A9q34CV:PGCnp
GO_Annotation
8021NUP214CAIN | CANnucleoporin 214kDa9q34.1CV:PGCnp
DMG:Nishioka_2013
DNM:Gulsuner_2013
57171DOLPP1LSFR2dolichyldiphosphatase 19q34.1CV:PGCnp
DMG:Jaffe_2016
883CCBL1GTK | KAT1 | KATIcysteine conjugate-beta lyase, cytoplasmic9q34.11CV:PGCnp
GO_Annotation
28ABOA3GALNT | A3GALT1 | GTB | NAGATABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)9q34.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
56623INPP5ECORS1 | CPD4 | JBTS1 | MORMS | PPI5PIVinositol polyphosphate-5-phosphatase E9q34.3CV:PGCnp
DMG:Jaffe_2016
23203PMPCAAlpha-MPP | INPP5E | P-55 | SCAR2peptidase (mitochondrial processing) alpha9q34.3CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
7712ZNF157HZF22zinc finger protein 157Xp11.2CV:PGCnp
PMID:cooccur
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
56548CHST7C6ST-2 | GST-5carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7Xp11.23CV:PGCnp
PMID:cooccur
8573CASKCAGH39 | CAMGUK | CMG | FGS4 | LIN2 | MICPCH | MRXSNA | TNRC8calcium/calmodulin-dependent serine protein kinase (MAGUK family)Xp11.4CV:PGCnp
Expression
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
Potential synaptic genes
8552INE1NCRNA00010inactivation escape 1 (non-protein coding)Xp11.4-p11.3PMID:cooccur
5931RBBP7RbAp46retinoblastoma binding protein 7Xp22.2CV:PGCnpChromatin Remodeling Genes
1947EFNB1CFND | CFNS | EFB1 | EFL3 | EPLG2 | Elk-L | LERK2ephrin-B1Xq12CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
Network
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
695BTKAGMX1 | AT | ATK | BPK | IMD1 | PSCTK1 | XLABruton tyrosine kinaseXq21.33-q22CV:PGCnp
DNM:Kranz_2015
Network
PMID:cooccur
5716PSMD10dJ889N15.2 | p28 | p28(GANK)proteasome 26S subunit, non-ATPase 10Xq22.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
2334AFF2FMR2 | FMR2P | FRAXE | MRX2 | OX19AF4/FMR2 family member 2Xq28CV:GWASdb
CV:PGCnp
GO_Annotation
Potential synaptic genes
1774DNASE1L1DNAS1L1 | DNASEX | DNL1L | G4.8 | XIBdeoxyribonuclease I-like 1Xq28CV:PGCnp
PMID:cooccur
3654IRAK1IRAK | pelleinterleukin 1 receptor associated kinase 1Xq28CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes