Gene Page: LARS2
Summary ?
| GeneID | 23395 |
| Symbol | LARS2 |
| Synonyms | LEURS|PRLTS4|mtLeuRS |
| Description | leucyl-tRNA synthetase 2, mitochondrial |
| Reference | MIM:604544|HGNC:HGNC:17095|Ensembl:ENSG00000011376|HPRD:05178|Vega:OTTHUMG00000133177 |
| Gene type | protein-coding |
| Map location | 3p21.3 |
| Pascal p-value | 0.331 |
| Sherlock p-value | 0.905 |
| Fetal beta | -0.476 |
| DMG | 1 (# studies) |
| eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cortex Frontal Cortex BA9 Hippocampus Hypothalamus Nucleus accumbens basal ganglia Putamen basal ganglia Meta |
| Support | CompositeSet Darnell FMRP targets Ascano FMRP targets |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS | |
| DMG:Nishioka_2013 | Genome-wide DNA methylation analysis | The authors investigated the methylation profiles of DNA in peripheral blood cells from 18 patients with first-episode schizophrenia (FESZ) and from 15 normal controls. | 1 |
| PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
| Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias | Click to show details |
Section I. Genetics and epigenetics annotation
Differentially methylated gene
| Probe | Chromosome | Position | Nearest gene | P (dis) | Beta (dis) | FDR (dis) | Study |
|---|---|---|---|---|---|---|---|
| cg18294881 | 3 | 45429876 | LARS2 | -0.024 | 0.58 | DMG:Nishioka_2013 |
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs4683113 | 3 | 45475333 | LARS2 | ENSG00000011376.5 | 1.961E-6 | 0 | 45335 | gtex_brain_ba24 |
| rs34394405 | 3 | 45477226 | LARS2 | ENSG00000011376.5 | 1.94E-6 | 0 | 47228 | gtex_brain_ba24 |
| rs11130062 | 3 | 45480858 | LARS2 | ENSG00000011376.5 | 1.866E-6 | 0 | 50860 | gtex_brain_ba24 |
| rs4311249 | 3 | 45483463 | LARS2 | ENSG00000011376.5 | 1.793E-6 | 0 | 53465 | gtex_brain_ba24 |
| rs13063737 | 3 | 45486302 | LARS2 | ENSG00000011376.5 | 1.767E-6 | 0 | 56304 | gtex_brain_ba24 |
| rs11929342 | 3 | 45492119 | LARS2 | ENSG00000011376.5 | 1.256E-7 | 0 | 62121 | gtex_brain_ba24 |
| rs4683114 | 3 | 45492685 | LARS2 | ENSG00000011376.5 | 7.302E-7 | 0 | 62687 | gtex_brain_ba24 |
| rs11130063 | 3 | 45493862 | LARS2 | ENSG00000011376.5 | 2.683E-9 | 0 | 63864 | gtex_brain_ba24 |
| rs2138209 | 3 | 45493941 | LARS2 | ENSG00000011376.5 | 7.945E-11 | 0 | 63943 | gtex_brain_ba24 |
| rs1399703 | 3 | 45495358 | LARS2 | ENSG00000011376.5 | 1.823E-10 | 0 | 65360 | gtex_brain_ba24 |
| rs375827681 | 3 | 45495927 | LARS2 | ENSG00000011376.5 | 5.373E-10 | 0 | 65929 | gtex_brain_ba24 |
| rs1877960 | 3 | 45496144 | LARS2 | ENSG00000011376.5 | 4.06E-10 | 0 | 66146 | gtex_brain_ba24 |
| rs965238 | 3 | 45497671 | LARS2 | ENSG00000011376.5 | 2.824E-10 | 0 | 67673 | gtex_brain_ba24 |
| rs1812600 | 3 | 45497947 | LARS2 | ENSG00000011376.5 | 2.735E-9 | 0 | 67949 | gtex_brain_ba24 |
| rs6768340 | 3 | 45498342 | LARS2 | ENSG00000011376.5 | 1.823E-10 | 0 | 68344 | gtex_brain_ba24 |
| rs6771080 | 3 | 45498726 | LARS2 | ENSG00000011376.5 | 2.755E-9 | 0 | 68728 | gtex_brain_ba24 |
| rs1949304 | 3 | 45500950 | LARS2 | ENSG00000011376.5 | 2.755E-9 | 0 | 70952 | gtex_brain_ba24 |
| rs1949303 | 3 | 45501088 | LARS2 | ENSG00000011376.5 | 2.255E-10 | 0 | 71090 | gtex_brain_ba24 |
| rs900326 | 3 | 45503893 | LARS2 | ENSG00000011376.5 | 2.754E-9 | 0 | 73895 | gtex_brain_ba24 |
| rs3774692 | 3 | 45507305 | LARS2 | ENSG00000011376.5 | 2.056E-10 | 0 | 77307 | gtex_brain_ba24 |
| rs4683116 | 3 | 45508718 | LARS2 | ENSG00000011376.5 | 2.757E-9 | 0 | 78720 | gtex_brain_ba24 |
| rs11921901 | 3 | 45509736 | LARS2 | ENSG00000011376.5 | 2.765E-9 | 0 | 79738 | gtex_brain_ba24 |
| rs3774690 | 3 | 45511026 | LARS2 | ENSG00000011376.5 | 2.545E-13 | 0 | 81028 | gtex_brain_ba24 |
| rs3796364 | 3 | 45511266 | LARS2 | ENSG00000011376.5 | 7.078E-13 | 0 | 81268 | gtex_brain_ba24 |
| rs11919039 | 3 | 45515648 | LARS2 | ENSG00000011376.5 | 3.547E-11 | 0 | 85650 | gtex_brain_ba24 |
| rs12487705 | 3 | 45517759 | LARS2 | ENSG00000011376.5 | 3.612E-11 | 0 | 87761 | gtex_brain_ba24 |
| rs12639021 | 3 | 45526812 | LARS2 | ENSG00000011376.5 | 2.495E-13 | 0 | 96814 | gtex_brain_ba24 |
| rs13088061 | 3 | 45528423 | LARS2 | ENSG00000011376.5 | 2.495E-13 | 0 | 98425 | gtex_brain_ba24 |
| rs11130066 | 3 | 45528997 | LARS2 | ENSG00000011376.5 | 3.606E-11 | 0 | 98999 | gtex_brain_ba24 |
| rs1817489 | 3 | 45529692 | LARS2 | ENSG00000011376.5 | 3.61E-11 | 0 | 99694 | gtex_brain_ba24 |
| rs1825212 | 3 | 45529896 | LARS2 | ENSG00000011376.5 | 3.612E-11 | 0 | 99898 | gtex_brain_ba24 |
| rs3733116 | 3 | 45530401 | LARS2 | ENSG00000011376.5 | 3.616E-11 | 0 | 100403 | gtex_brain_ba24 |
| rs13070575 | 3 | 45534973 | LARS2 | ENSG00000011376.5 | 2.489E-13 | 0 | 104975 | gtex_brain_ba24 |
| rs3774684 | 3 | 45535941 | LARS2 | ENSG00000011376.5 | 3.64E-11 | 0 | 105943 | gtex_brain_ba24 |
| rs3733115 | 3 | 45537414 | LARS2 | ENSG00000011376.5 | 2.469E-8 | 0 | 107416 | gtex_brain_ba24 |
| rs12638088 | 3 | 45537973 | LARS2 | ENSG00000011376.5 | 2.488E-13 | 0 | 107975 | gtex_brain_ba24 |
| rs11721185 | 3 | 45539685 | LARS2 | ENSG00000011376.5 | 3.652E-11 | 0 | 109687 | gtex_brain_ba24 |
| rs2306522 | 3 | 45542083 | LARS2 | ENSG00000011376.5 | 3.662E-11 | 0 | 112085 | gtex_brain_ba24 |
| rs12629394 | 3 | 45545451 | LARS2 | ENSG00000011376.5 | 4.394E-13 | 0 | 115453 | gtex_brain_ba24 |
| rs35269084 | 3 | 45546577 | LARS2 | ENSG00000011376.5 | 2.483E-13 | 0 | 116579 | gtex_brain_ba24 |
| rs2170546 | 3 | 45549298 | LARS2 | ENSG00000011376.5 | 4.394E-13 | 0 | 119300 | gtex_brain_ba24 |
| rs900324 | 3 | 45549807 | LARS2 | ENSG00000011376.5 | 2.483E-13 | 0 | 119809 | gtex_brain_ba24 |
| rs1110778 | 3 | 45550661 | LARS2 | ENSG00000011376.5 | 1.825E-12 | 0 | 120663 | gtex_brain_ba24 |
| rs12633889 | 3 | 45551898 | LARS2 | ENSG00000011376.5 | 2.484E-13 | 0 | 121900 | gtex_brain_ba24 |
| rs2291237 | 3 | 45555044 | LARS2 | ENSG00000011376.5 | 3.459E-11 | 0 | 125046 | gtex_brain_ba24 |
| rs34058819 | 3 | 45555700 | LARS2 | ENSG00000011376.5 | 2.595E-13 | 0 | 125702 | gtex_brain_ba24 |
| rs17077951 | 3 | 45555765 | LARS2 | ENSG00000011376.5 | 2.596E-13 | 0 | 125767 | gtex_brain_ba24 |
| rs10510746 | 3 | 45557003 | LARS2 | ENSG00000011376.5 | 3.368E-11 | 0 | 127005 | gtex_brain_ba24 |
| rs11549809 | 3 | 45557707 | LARS2 | ENSG00000011376.5 | 2.809E-13 | 0 | 127709 | gtex_brain_ba24 |
| rs2276860 | 3 | 45559621 | LARS2 | ENSG00000011376.5 | 2.746E-13 | 0 | 129623 | gtex_brain_ba24 |
| rs12630693 | 3 | 45560113 | LARS2 | ENSG00000011376.5 | 2.765E-13 | 0 | 130115 | gtex_brain_ba24 |
| rs11717056 | 3 | 45560855 | LARS2 | ENSG00000011376.5 | 8.742E-10 | 0 | 130857 | gtex_brain_ba24 |
| rs113936742 | 3 | 45561149 | LARS2 | ENSG00000011376.5 | 9.051E-13 | 0 | 131151 | gtex_brain_ba24 |
| rs6441920 | 3 | 45561203 | LARS2 | ENSG00000011376.5 | 2.807E-13 | 0 | 131205 | gtex_brain_ba24 |
| rs267224 | 3 | 45561487 | LARS2 | ENSG00000011376.5 | 3.338E-11 | 0 | 131489 | gtex_brain_ba24 |
| rs267222 | 3 | 45564003 | LARS2 | ENSG00000011376.5 | 3.338E-11 | 0 | 134005 | gtex_brain_ba24 |
| rs12630334 | 3 | 45564439 | LARS2 | ENSG00000011376.5 | 2.938E-13 | 0 | 134441 | gtex_brain_ba24 |
| rs7626059 | 3 | 45564879 | LARS2 | ENSG00000011376.5 | 3.34E-11 | 0 | 134881 | gtex_brain_ba24 |
| rs2624668 | 3 | 45567557 | LARS2 | ENSG00000011376.5 | 3.328E-11 | 0 | 137559 | gtex_brain_ba24 |
| rs13099924 | 3 | 45569582 | LARS2 | ENSG00000011376.5 | 3.2E-13 | 0 | 139584 | gtex_brain_ba24 |
| rs35131533 | 3 | 45570065 | LARS2 | ENSG00000011376.5 | 3.216E-13 | 0 | 140067 | gtex_brain_ba24 |
| rs11706785 | 3 | 45571080 | LARS2 | ENSG00000011376.5 | 2.481E-8 | 0 | 141082 | gtex_brain_ba24 |
| rs2578672 | 3 | 45572977 | LARS2 | ENSG00000011376.5 | 3.33E-11 | 0 | 142979 | gtex_brain_ba24 |
| rs2624665 | 3 | 45572979 | LARS2 | ENSG00000011376.5 | 3.33E-11 | 0 | 142981 | gtex_brain_ba24 |
| rs2578670 | 3 | 45573466 | LARS2 | ENSG00000011376.5 | 3.328E-11 | 0 | 143468 | gtex_brain_ba24 |
| rs2578669 | 3 | 45573541 | LARS2 | ENSG00000011376.5 | 3.328E-11 | 0 | 143543 | gtex_brain_ba24 |
| rs61286189 | 3 | 45579533 | LARS2 | ENSG00000011376.5 | 2.076E-11 | 0 | 149535 | gtex_brain_ba24 |
| rs34622472 | 3 | 45579699 | LARS2 | ENSG00000011376.5 | 2.128E-11 | 0 | 149701 | gtex_brain_ba24 |
| rs17077990 | 3 | 45581959 | LARS2 | ENSG00000011376.5 | 3.017E-11 | 0 | 151961 | gtex_brain_ba24 |
| rs267256 | 3 | 45587111 | LARS2 | ENSG00000011376.5 | 6.642E-10 | 0 | 157113 | gtex_brain_ba24 |
| rs3821895 | 3 | 45587983 | LARS2 | ENSG00000011376.5 | 1.601E-11 | 0 | 157985 | gtex_brain_ba24 |
| rs267270 | 3 | 45593237 | LARS2 | ENSG00000011376.5 | 2.009E-11 | 0 | 163239 | gtex_brain_ba24 |
| rs267271 | 3 | 45593969 | LARS2 | ENSG00000011376.5 | 1.677E-11 | 0 | 163971 | gtex_brain_ba24 |
| rs267272 | 3 | 45594122 | LARS2 | ENSG00000011376.5 | 1.64E-8 | 0 | 164124 | gtex_brain_ba24 |
| rs267273 | 3 | 45594983 | LARS2 | ENSG00000011376.5 | 3.231E-11 | 0 | 164985 | gtex_brain_ba24 |
| rs267274 | 3 | 45595006 | LARS2 | ENSG00000011376.5 | 5.408E-11 | 0 | 165008 | gtex_brain_ba24 |
| rs267275 | 3 | 45595459 | LARS2 | ENSG00000011376.5 | 9.165E-13 | 0 | 165461 | gtex_brain_ba24 |
| rs267277 | 3 | 45597610 | LARS2 | ENSG00000011376.5 | 1.387E-7 | 0 | 167612 | gtex_brain_ba24 |
| rs267278 | 3 | 45598099 | LARS2 | ENSG00000011376.5 | 1.811E-7 | 0 | 168101 | gtex_brain_ba24 |
| rs267279 | 3 | 45598475 | LARS2 | ENSG00000011376.5 | 1.116E-6 | 0 | 168477 | gtex_brain_ba24 |
| rs267280 | 3 | 45598744 | LARS2 | ENSG00000011376.5 | 1.811E-7 | 0 | 168746 | gtex_brain_ba24 |
| rs267282 | 3 | 45598919 | LARS2 | ENSG00000011376.5 | 1.811E-7 | 0 | 168921 | gtex_brain_ba24 |
| rs4575933 | 3 | 45599419 | LARS2 | ENSG00000011376.5 | 1.811E-7 | 0 | 169421 | gtex_brain_ba24 |
| rs267283 | 3 | 45599906 | LARS2 | ENSG00000011376.5 | 1.811E-7 | 0 | 169908 | gtex_brain_ba24 |
| rs174818 | 3 | 45600530 | LARS2 | ENSG00000011376.5 | 1.892E-7 | 0 | 170532 | gtex_brain_ba24 |
| rs267257 | 3 | 45600868 | LARS2 | ENSG00000011376.5 | 5.116E-7 | 0 | 170870 | gtex_brain_ba24 |
| rs267259 | 3 | 45601218 | LARS2 | ENSG00000011376.5 | 2.674E-9 | 0 | 171220 | gtex_brain_ba24 |
| rs267260 | 3 | 45601252 | LARS2 | ENSG00000011376.5 | 2.674E-9 | 0 | 171254 | gtex_brain_ba24 |
| rs267261 | 3 | 45601597 | LARS2 | ENSG00000011376.5 | 2.666E-9 | 0 | 171599 | gtex_brain_ba24 |
| rs13083568 | 3 | 45602225 | LARS2 | ENSG00000011376.5 | 1.609E-8 | 0 | 172227 | gtex_brain_ba24 |
| rs35345735 | 3 | 45602836 | LARS2 | ENSG00000011376.5 | 1.675E-7 | 0 | 172838 | gtex_brain_ba24 |
| rs71617895 | 3 | 45603310 | LARS2 | ENSG00000011376.5 | 1.372E-7 | 0 | 173312 | gtex_brain_ba24 |
| rs1600905 | 3 | 45603811 | LARS2 | ENSG00000011376.5 | 1.166E-7 | 0 | 173813 | gtex_brain_ba24 |
| rs1600906 | 3 | 45603944 | LARS2 | ENSG00000011376.5 | 1.166E-7 | 0 | 173946 | gtex_brain_ba24 |
| rs13075111 | 3 | 45604131 | LARS2 | ENSG00000011376.5 | 1.166E-7 | 0 | 174133 | gtex_brain_ba24 |
| rs13075121 | 3 | 45604159 | LARS2 | ENSG00000011376.5 | 1.166E-7 | 0 | 174161 | gtex_brain_ba24 |
| rs10452026 | 3 | 45604340 | LARS2 | ENSG00000011376.5 | 3.061E-7 | 0 | 174342 | gtex_brain_ba24 |
| rs10452027 | 3 | 45604503 | LARS2 | ENSG00000011376.5 | 4.927E-8 | 0 | 174505 | gtex_brain_ba24 |
| rs2083242 | 3 | 45604690 | LARS2 | ENSG00000011376.5 | 1.166E-7 | 0 | 174692 | gtex_brain_ba24 |
| rs386355892 | 3 | 45606724 | LARS2 | ENSG00000011376.5 | 1.699E-7 | 0 | 176726 | gtex_brain_ba24 |
| rs736483 | 3 | 45608701 | LARS2 | ENSG00000011376.5 | 5.561E-7 | 0 | 178703 | gtex_brain_ba24 |
| rs76816 | 3 | 45608708 | LARS2 | ENSG00000011376.5 | 1.995E-6 | 0 | 178710 | gtex_brain_ba24 |
| rs2003879 | 3 | 45609075 | LARS2 | ENSG00000011376.5 | 6.084E-8 | 0 | 179077 | gtex_brain_ba24 |
| rs13066873 | 3 | 45617040 | LARS2 | ENSG00000011376.5 | 2.607E-6 | 0 | 187042 | gtex_brain_ba24 |
| rs35848059 | 3 | 45618695 | LARS2 | ENSG00000011376.5 | 2.099E-6 | 0 | 188697 | gtex_brain_ba24 |
| rs147680951 | 3 | 45619107 | LARS2 | ENSG00000011376.5 | 1.663E-6 | 0 | 189109 | gtex_brain_ba24 |
| rs4377517 | 3 | 45641806 | LARS2 | ENSG00000011376.5 | 7.466E-7 | 0 | 211808 | gtex_brain_ba24 |
| rs13059518 | 3 | 45643442 | LARS2 | ENSG00000011376.5 | 2.571E-7 | 0 | 213444 | gtex_brain_ba24 |
| rs34877991 | 3 | 45643648 | LARS2 | ENSG00000011376.5 | 1.385E-6 | 0 | 213650 | gtex_brain_ba24 |
| rs2254828 | 3 | 45646879 | LARS2 | ENSG00000011376.5 | 1.057E-6 | 0 | 216881 | gtex_brain_ba24 |
| rs4458403 | 3 | 45648766 | LARS2 | ENSG00000011376.5 | 5.564E-8 | 0 | 218768 | gtex_brain_ba24 |
| rs17261269 | 3 | 45651895 | LARS2 | ENSG00000011376.5 | 6.523E-8 | 0 | 221897 | gtex_brain_ba24 |
| rs1110650 | 3 | 45653384 | LARS2 | ENSG00000011376.5 | 8.044E-8 | 0 | 223386 | gtex_brain_ba24 |
| rs66748093 | 3 | 45654358 | LARS2 | ENSG00000011376.5 | 5.564E-8 | 0 | 224360 | gtex_brain_ba24 |
| rs13089744 | 3 | 45656279 | LARS2 | ENSG00000011376.5 | 6.516E-8 | 0 | 226281 | gtex_brain_ba24 |
| rs13094153 | 3 | 45656562 | LARS2 | ENSG00000011376.5 | 6.523E-8 | 0 | 226564 | gtex_brain_ba24 |
| rs6808958 | 3 | 45662116 | LARS2 | ENSG00000011376.5 | 5.564E-8 | 0 | 232118 | gtex_brain_ba24 |
| rs4682791 | 3 | 45665194 | LARS2 | ENSG00000011376.5 | 5.564E-8 | 0 | 235196 | gtex_brain_ba24 |
| rs4401397 | 3 | 45671401 | LARS2 | ENSG00000011376.5 | 3.603E-7 | 0 | 241403 | gtex_brain_ba24 |
| rs2012762 | 3 | 45672871 | LARS2 | ENSG00000011376.5 | 3.603E-7 | 0 | 242873 | gtex_brain_ba24 |
| rs75040931 | 3 | 45422763 | LARS2 | ENSG00000011376.5 | 2.486E-6 | 0 | -7235 | gtex_brain_putamen_basal |
| rs35104704 | 3 | 45472788 | LARS2 | ENSG00000011376.5 | 9.298E-8 | 0 | 42790 | gtex_brain_putamen_basal |
| rs34877269 | 3 | 45475070 | LARS2 | ENSG00000011376.5 | 1.741E-7 | 0 | 45072 | gtex_brain_putamen_basal |
| rs2014378 | 3 | 45476486 | LARS2 | ENSG00000011376.5 | 1.681E-7 | 0 | 46488 | gtex_brain_putamen_basal |
| rs1108181 | 3 | 45477510 | LARS2 | ENSG00000011376.5 | 1.681E-7 | 0 | 47512 | gtex_brain_putamen_basal |
| rs1108180 | 3 | 45477777 | LARS2 | ENSG00000011376.5 | 1.681E-7 | 0 | 47779 | gtex_brain_putamen_basal |
| rs11929664 | 3 | 45479841 | LARS2 | ENSG00000011376.5 | 1.681E-7 | 0 | 49843 | gtex_brain_putamen_basal |
| rs77454942 | 3 | 45481108 | LARS2 | ENSG00000011376.5 | 1.594E-7 | 0 | 51110 | gtex_brain_putamen_basal |
| rs200438456 | 3 | 45482066 | LARS2 | ENSG00000011376.5 | 4.032E-7 | 0 | 52068 | gtex_brain_putamen_basal |
| rs397824037 | 3 | 45482445 | LARS2 | ENSG00000011376.5 | 1.493E-7 | 0 | 52447 | gtex_brain_putamen_basal |
| rs9311369 | 3 | 45482541 | LARS2 | ENSG00000011376.5 | 8.757E-8 | 0 | 52543 | gtex_brain_putamen_basal |
| rs11926964 | 3 | 45489449 | LARS2 | ENSG00000011376.5 | 8.741E-8 | 0 | 59451 | gtex_brain_putamen_basal |
| rs11929342 | 3 | 45492119 | LARS2 | ENSG00000011376.5 | 1.447E-7 | 0 | 62121 | gtex_brain_putamen_basal |
| rs11130063 | 3 | 45493862 | LARS2 | ENSG00000011376.5 | 5.088E-8 | 0 | 63864 | gtex_brain_putamen_basal |
| rs2138209 | 3 | 45493941 | LARS2 | ENSG00000011376.5 | 4.374E-11 | 0 | 63943 | gtex_brain_putamen_basal |
| rs1399703 | 3 | 45495358 | LARS2 | ENSG00000011376.5 | 7.938E-12 | 0 | 65360 | gtex_brain_putamen_basal |
| rs375827681 | 3 | 45495927 | LARS2 | ENSG00000011376.5 | 3.56E-9 | 0 | 65929 | gtex_brain_putamen_basal |
| rs1877960 | 3 | 45496144 | LARS2 | ENSG00000011376.5 | 2.527E-9 | 0 | 66146 | gtex_brain_putamen_basal |
| rs965238 | 3 | 45497671 | LARS2 | ENSG00000011376.5 | 8.15E-7 | 0 | 67673 | gtex_brain_putamen_basal |
| rs1812600 | 3 | 45497947 | LARS2 | ENSG00000011376.5 | 5.611E-8 | 0 | 67949 | gtex_brain_putamen_basal |
| rs6768340 | 3 | 45498342 | LARS2 | ENSG00000011376.5 | 7.938E-12 | 0 | 68344 | gtex_brain_putamen_basal |
| rs6771080 | 3 | 45498726 | LARS2 | ENSG00000011376.5 | 5.443E-8 | 0 | 68728 | gtex_brain_putamen_basal |
| rs1949304 | 3 | 45500950 | LARS2 | ENSG00000011376.5 | 5.443E-8 | 0 | 70952 | gtex_brain_putamen_basal |
| rs1949303 | 3 | 45501088 | LARS2 | ENSG00000011376.5 | 2.501E-9 | 0 | 71090 | gtex_brain_putamen_basal |
| rs900326 | 3 | 45503893 | LARS2 | ENSG00000011376.5 | 5.376E-8 | 0 | 73895 | gtex_brain_putamen_basal |
| rs3774692 | 3 | 45507305 | LARS2 | ENSG00000011376.5 | 4.113E-12 | 0 | 77307 | gtex_brain_putamen_basal |
| rs4683116 | 3 | 45508718 | LARS2 | ENSG00000011376.5 | 4.969E-8 | 0 | 78720 | gtex_brain_putamen_basal |
| rs11921901 | 3 | 45509736 | LARS2 | ENSG00000011376.5 | 4.987E-8 | 0 | 79738 | gtex_brain_putamen_basal |
| rs3774690 | 3 | 45511026 | LARS2 | ENSG00000011376.5 | 3.442E-13 | 0 | 81028 | gtex_brain_putamen_basal |
| rs3796364 | 3 | 45511266 | LARS2 | ENSG00000011376.5 | 2.482E-10 | 0 | 81268 | gtex_brain_putamen_basal |
| rs11919039 | 3 | 45515648 | LARS2 | ENSG00000011376.5 | 7.615E-9 | 0 | 85650 | gtex_brain_putamen_basal |
| rs12487705 | 3 | 45517759 | LARS2 | ENSG00000011376.5 | 7.471E-9 | 0 | 87761 | gtex_brain_putamen_basal |
| rs12639021 | 3 | 45526812 | LARS2 | ENSG00000011376.5 | 3.031E-13 | 0 | 96814 | gtex_brain_putamen_basal |
| rs13088061 | 3 | 45528423 | LARS2 | ENSG00000011376.5 | 3.057E-13 | 0 | 98425 | gtex_brain_putamen_basal |
| rs11130066 | 3 | 45528997 | LARS2 | ENSG00000011376.5 | 7.328E-9 | 0 | 98999 | gtex_brain_putamen_basal |
| rs1817489 | 3 | 45529692 | LARS2 | ENSG00000011376.5 | 7.31E-9 | 0 | 99694 | gtex_brain_putamen_basal |
| rs1825212 | 3 | 45529896 | LARS2 | ENSG00000011376.5 | 7.327E-9 | 0 | 99898 | gtex_brain_putamen_basal |
| rs3733116 | 3 | 45530401 | LARS2 | ENSG00000011376.5 | 7.293E-9 | 0 | 100403 | gtex_brain_putamen_basal |
| rs13070575 | 3 | 45534973 | LARS2 | ENSG00000011376.5 | 3.015E-13 | 0 | 104975 | gtex_brain_putamen_basal |
| rs3774684 | 3 | 45535941 | LARS2 | ENSG00000011376.5 | 7.162E-9 | 0 | 105943 | gtex_brain_putamen_basal |
| rs12638088 | 3 | 45537973 | LARS2 | ENSG00000011376.5 | 3.01E-13 | 0 | 107975 | gtex_brain_putamen_basal |
| rs11721185 | 3 | 45539685 | LARS2 | ENSG00000011376.5 | 7.264E-9 | 0 | 109687 | gtex_brain_putamen_basal |
| rs2306522 | 3 | 45542083 | LARS2 | ENSG00000011376.5 | 7.266E-9 | 0 | 112085 | gtex_brain_putamen_basal |
| rs12629394 | 3 | 45545451 | LARS2 | ENSG00000011376.5 | 3.242E-13 | 0 | 115453 | gtex_brain_putamen_basal |
| rs35269084 | 3 | 45546577 | LARS2 | ENSG00000011376.5 | 2.996E-13 | 0 | 116579 | gtex_brain_putamen_basal |
| rs2170546 | 3 | 45549298 | LARS2 | ENSG00000011376.5 | 3.242E-13 | 0 | 119300 | gtex_brain_putamen_basal |
| rs900324 | 3 | 45549807 | LARS2 | ENSG00000011376.5 | 3.001E-13 | 0 | 119809 | gtex_brain_putamen_basal |
| rs1110778 | 3 | 45550661 | LARS2 | ENSG00000011376.5 | 2.969E-12 | 0 | 120663 | gtex_brain_putamen_basal |
| rs12633889 | 3 | 45551898 | LARS2 | ENSG00000011376.5 | 3.019E-13 | 0 | 121900 | gtex_brain_putamen_basal |
| rs2291237 | 3 | 45555044 | LARS2 | ENSG00000011376.5 | 7.705E-9 | 0 | 125046 | gtex_brain_putamen_basal |
| rs34058819 | 3 | 45555700 | LARS2 | ENSG00000011376.5 | 3.366E-13 | 0 | 125702 | gtex_brain_putamen_basal |
| rs17077951 | 3 | 45555765 | LARS2 | ENSG00000011376.5 | 3.366E-13 | 0 | 125767 | gtex_brain_putamen_basal |
| rs10510746 | 3 | 45557003 | LARS2 | ENSG00000011376.5 | 8.409E-9 | 0 | 127005 | gtex_brain_putamen_basal |
| rs11549809 | 3 | 45557707 | LARS2 | ENSG00000011376.5 | 3.688E-13 | 0 | 127709 | gtex_brain_putamen_basal |
| rs2276860 | 3 | 45559621 | LARS2 | ENSG00000011376.5 | 6.053E-13 | 0 | 129623 | gtex_brain_putamen_basal |
| rs12630693 | 3 | 45560113 | LARS2 | ENSG00000011376.5 | 3.692E-13 | 0 | 130115 | gtex_brain_putamen_basal |
| rs113936742 | 3 | 45561149 | LARS2 | ENSG00000011376.5 | 7.302E-13 | 0 | 131151 | gtex_brain_putamen_basal |
| rs6441920 | 3 | 45561203 | LARS2 | ENSG00000011376.5 | 3.7E-13 | 0 | 131205 | gtex_brain_putamen_basal |
| rs267224 | 3 | 45561487 | LARS2 | ENSG00000011376.5 | 8.844E-9 | 0 | 131489 | gtex_brain_putamen_basal |
| rs35676252 | 3 | 45563862 | LARS2 | ENSG00000011376.5 | 1.719E-8 | 0 | 133864 | gtex_brain_putamen_basal |
| rs267222 | 3 | 45564003 | LARS2 | ENSG00000011376.5 | 8.844E-9 | 0 | 134005 | gtex_brain_putamen_basal |
| rs12630334 | 3 | 45564439 | LARS2 | ENSG00000011376.5 | 3.736E-13 | 0 | 134441 | gtex_brain_putamen_basal |
| rs7626059 | 3 | 45564879 | LARS2 | ENSG00000011376.5 | 9.194E-9 | 0 | 134881 | gtex_brain_putamen_basal |
| rs2624668 | 3 | 45567557 | LARS2 | ENSG00000011376.5 | 8.844E-9 | 0 | 137559 | gtex_brain_putamen_basal |
| rs13099924 | 3 | 45569582 | LARS2 | ENSG00000011376.5 | 6.765E-13 | 0 | 139584 | gtex_brain_putamen_basal |
| rs35131533 | 3 | 45570065 | LARS2 | ENSG00000011376.5 | 6.794E-13 | 0 | 140067 | gtex_brain_putamen_basal |
| rs2578672 | 3 | 45572977 | LARS2 | ENSG00000011376.5 | 9.104E-9 | 0 | 142979 | gtex_brain_putamen_basal |
| rs2624665 | 3 | 45572979 | LARS2 | ENSG00000011376.5 | 9.104E-9 | 0 | 142981 | gtex_brain_putamen_basal |
| rs2578670 | 3 | 45573466 | LARS2 | ENSG00000011376.5 | 8.703E-9 | 0 | 143468 | gtex_brain_putamen_basal |
| rs2578669 | 3 | 45573541 | LARS2 | ENSG00000011376.5 | 8.693E-9 | 0 | 143543 | gtex_brain_putamen_basal |
| rs61286189 | 3 | 45579533 | LARS2 | ENSG00000011376.5 | 3.5E-11 | 0 | 149535 | gtex_brain_putamen_basal |
| rs34622472 | 3 | 45579699 | LARS2 | ENSG00000011376.5 | 3.563E-11 | 0 | 149701 | gtex_brain_putamen_basal |
| rs17077990 | 3 | 45581959 | LARS2 | ENSG00000011376.5 | 4.682E-11 | 0 | 151961 | gtex_brain_putamen_basal |
| rs34191038 | 3 | 45583297 | LARS2 | ENSG00000011376.5 | 1.245E-9 | 0 | 153299 | gtex_brain_putamen_basal |
| rs267256 | 3 | 45587111 | LARS2 | ENSG00000011376.5 | 6.743E-8 | 0 | 157113 | gtex_brain_putamen_basal |
| rs3821895 | 3 | 45587983 | LARS2 | ENSG00000011376.5 | 1.897E-11 | 0 | 157985 | gtex_brain_putamen_basal |
| rs267270 | 3 | 45593237 | LARS2 | ENSG00000011376.5 | 2.159E-8 | 0 | 163239 | gtex_brain_putamen_basal |
| rs267271 | 3 | 45593969 | LARS2 | ENSG00000011376.5 | 2.147E-8 | 0 | 163971 | gtex_brain_putamen_basal |
| rs267273 | 3 | 45594983 | LARS2 | ENSG00000011376.5 | 4.571E-8 | 0 | 164985 | gtex_brain_putamen_basal |
| rs267274 | 3 | 45595006 | LARS2 | ENSG00000011376.5 | 4.571E-8 | 0 | 165008 | gtex_brain_putamen_basal |
| rs267275 | 3 | 45595459 | LARS2 | ENSG00000011376.5 | 3.43E-9 | 0 | 165461 | gtex_brain_putamen_basal |
| rs267277 | 3 | 45597610 | LARS2 | ENSG00000011376.5 | 3.531E-7 | 0 | 167612 | gtex_brain_putamen_basal |
| rs267278 | 3 | 45598099 | LARS2 | ENSG00000011376.5 | 1.606E-7 | 0 | 168101 | gtex_brain_putamen_basal |
| rs267279 | 3 | 45598475 | LARS2 | ENSG00000011376.5 | 2.69E-6 | 0 | 168477 | gtex_brain_putamen_basal |
| rs267280 | 3 | 45598744 | LARS2 | ENSG00000011376.5 | 1.959E-7 | 0 | 168746 | gtex_brain_putamen_basal |
| rs267282 | 3 | 45598919 | LARS2 | ENSG00000011376.5 | 1.959E-7 | 0 | 168921 | gtex_brain_putamen_basal |
| rs4575933 | 3 | 45599419 | LARS2 | ENSG00000011376.5 | 1.959E-7 | 0 | 169421 | gtex_brain_putamen_basal |
| rs267283 | 3 | 45599906 | LARS2 | ENSG00000011376.5 | 1.959E-7 | 0 | 169908 | gtex_brain_putamen_basal |
| rs174818 | 3 | 45600530 | LARS2 | ENSG00000011376.5 | 2.039E-7 | 0 | 170532 | gtex_brain_putamen_basal |
| rs267257 | 3 | 45600868 | LARS2 | ENSG00000011376.5 | 2.138E-6 | 0 | 170870 | gtex_brain_putamen_basal |
| rs267259 | 3 | 45601218 | LARS2 | ENSG00000011376.5 | 2.036E-11 | 0 | 171220 | gtex_brain_putamen_basal |
| rs267260 | 3 | 45601252 | LARS2 | ENSG00000011376.5 | 2.036E-11 | 0 | 171254 | gtex_brain_putamen_basal |
| rs267261 | 3 | 45601597 | LARS2 | ENSG00000011376.5 | 2.04E-11 | 0 | 171599 | gtex_brain_putamen_basal |
| rs13083568 | 3 | 45602225 | LARS2 | ENSG00000011376.5 | 1.524E-12 | 0 | 172227 | gtex_brain_putamen_basal |
| rs35345735 | 3 | 45602836 | LARS2 | ENSG00000011376.5 | 8.001E-10 | 0 | 172838 | gtex_brain_putamen_basal |
| rs71617895 | 3 | 45603310 | LARS2 | ENSG00000011376.5 | 1.027E-9 | 0 | 173312 | gtex_brain_putamen_basal |
| rs1600905 | 3 | 45603811 | LARS2 | ENSG00000011376.5 | 1.331E-9 | 0 | 173813 | gtex_brain_putamen_basal |
| rs1600906 | 3 | 45603944 | LARS2 | ENSG00000011376.5 | 1.331E-9 | 0 | 173946 | gtex_brain_putamen_basal |
| rs13075111 | 3 | 45604131 | LARS2 | ENSG00000011376.5 | 1.331E-9 | 0 | 174133 | gtex_brain_putamen_basal |
| rs13075121 | 3 | 45604159 | LARS2 | ENSG00000011376.5 | 1.331E-9 | 0 | 174161 | gtex_brain_putamen_basal |
| rs10452026 | 3 | 45604340 | LARS2 | ENSG00000011376.5 | 1.327E-9 | 0 | 174342 | gtex_brain_putamen_basal |
| rs10452027 | 3 | 45604503 | LARS2 | ENSG00000011376.5 | 5.125E-9 | 0 | 174505 | gtex_brain_putamen_basal |
| rs2083242 | 3 | 45604690 | LARS2 | ENSG00000011376.5 | 1.331E-9 | 0 | 174692 | gtex_brain_putamen_basal |
| rs2083241 | 3 | 45604834 | LARS2 | ENSG00000011376.5 | 2.258E-6 | 0 | 174836 | gtex_brain_putamen_basal |
| rs6791380 | 3 | 45605786 | LARS2 | ENSG00000011376.5 | 1.336E-6 | 0 | 175788 | gtex_brain_putamen_basal |
| rs386355892 | 3 | 45606724 | LARS2 | ENSG00000011376.5 | 1.469E-9 | 0 | 176726 | gtex_brain_putamen_basal |
| rs736483 | 3 | 45608701 | LARS2 | ENSG00000011376.5 | 2.093E-8 | 0 | 178703 | gtex_brain_putamen_basal |
| rs76816 | 3 | 45608708 | LARS2 | ENSG00000011376.5 | 1.404E-6 | 0 | 178710 | gtex_brain_putamen_basal |
| rs2003879 | 3 | 45609075 | LARS2 | ENSG00000011376.5 | 1.086E-8 | 0 | 179077 | gtex_brain_putamen_basal |
| rs9844307 | 3 | 45609868 | LARS2 | ENSG00000011376.5 | 2.871E-8 | 0 | 179870 | gtex_brain_putamen_basal |
| rs4683123 | 3 | 45610284 | LARS2 | ENSG00000011376.5 | 1.311E-6 | 0 | 180286 | gtex_brain_putamen_basal |
| rs35203209 | 3 | 45610344 | LARS2 | ENSG00000011376.5 | 2.89E-8 | 0 | 180346 | gtex_brain_putamen_basal |
| rs6781081 | 3 | 45614060 | LARS2 | ENSG00000011376.5 | 4.98E-7 | 0 | 184062 | gtex_brain_putamen_basal |
| rs34378743 | 3 | 45616845 | LARS2 | ENSG00000011376.5 | 1.132E-7 | 0 | 186847 | gtex_brain_putamen_basal |
| rs56206232 | 3 | 45616898 | LARS2 | ENSG00000011376.5 | 1.132E-7 | 0 | 186900 | gtex_brain_putamen_basal |
| rs13066873 | 3 | 45617040 | LARS2 | ENSG00000011376.5 | 1.363E-8 | 0 | 187042 | gtex_brain_putamen_basal |
| rs35848059 | 3 | 45618695 | LARS2 | ENSG00000011376.5 | 5.079E-10 | 0 | 188697 | gtex_brain_putamen_basal |
| rs147680951 | 3 | 45619107 | LARS2 | ENSG00000011376.5 | 4.832E-10 | 0 | 189109 | gtex_brain_putamen_basal |
| rs13084796 | 3 | 45619988 | LARS2 | ENSG00000011376.5 | 2.327E-6 | 0 | 189990 | gtex_brain_putamen_basal |
| rs267243 | 3 | 45622893 | LARS2 | ENSG00000011376.5 | 2.777E-6 | 0 | 192895 | gtex_brain_putamen_basal |
| rs1021124 | 3 | 45623774 | LARS2 | ENSG00000011376.5 | 1.449E-6 | 0 | 193776 | gtex_brain_putamen_basal |
| rs267215 | 3 | 45632074 | LARS2 | ENSG00000011376.5 | 6.17E-7 | 0 | 202076 | gtex_brain_putamen_basal |
| rs267216 | 3 | 45632221 | LARS2 | ENSG00000011376.5 | 6.17E-7 | 0 | 202223 | gtex_brain_putamen_basal |
| rs13083425 | 3 | 45632288 | LARS2 | ENSG00000011376.5 | 3.629E-9 | 0 | 202290 | gtex_brain_putamen_basal |
| rs267217 | 3 | 45632317 | LARS2 | ENSG00000011376.5 | 6.17E-7 | 0 | 202319 | gtex_brain_putamen_basal |
| rs71095042 | 3 | 45632950 | LARS2 | ENSG00000011376.5 | 1.723E-8 | 0 | 202952 | gtex_brain_putamen_basal |
| rs267218 | 3 | 45633834 | LARS2 | ENSG00000011376.5 | 2.016E-6 | 0 | 203836 | gtex_brain_putamen_basal |
| rs13074123 | 3 | 45635413 | LARS2 | ENSG00000011376.5 | 9.581E-9 | 0 | 205415 | gtex_brain_putamen_basal |
| rs267238 | 3 | 45636335 | LARS2 | ENSG00000011376.5 | 2.943E-6 | 0 | 206337 | gtex_brain_putamen_basal |
| rs267237 | 3 | 45637253 | LARS2 | ENSG00000011376.5 | 4.446E-6 | 0 | 207255 | gtex_brain_putamen_basal |
| rs267236 | 3 | 45637439 | LARS2 | ENSG00000011376.5 | 1.882E-6 | 0 | 207441 | gtex_brain_putamen_basal |
| rs13086458 | 3 | 45637830 | LARS2 | ENSG00000011376.5 | 1.132E-7 | 0 | 207832 | gtex_brain_putamen_basal |
| rs4377517 | 3 | 45641806 | LARS2 | ENSG00000011376.5 | 4.646E-7 | 0 | 211808 | gtex_brain_putamen_basal |
| rs200750505 | 3 | 45643441 | LARS2 | ENSG00000011376.5 | 3.649E-6 | 0 | 213443 | gtex_brain_putamen_basal |
| rs13059518 | 3 | 45643442 | LARS2 | ENSG00000011376.5 | 9.06E-7 | 0 | 213444 | gtex_brain_putamen_basal |
| rs2254828 | 3 | 45646879 | LARS2 | ENSG00000011376.5 | 1.26E-6 | 0 | 216881 | gtex_brain_putamen_basal |
| rs4458403 | 3 | 45648766 | LARS2 | ENSG00000011376.5 | 1.157E-7 | 0 | 218768 | gtex_brain_putamen_basal |
| rs17261269 | 3 | 45651895 | LARS2 | ENSG00000011376.5 | 4.146E-6 | 0 | 221897 | gtex_brain_putamen_basal |
| rs1110650 | 3 | 45653384 | LARS2 | ENSG00000011376.5 | 3.997E-7 | 0 | 223386 | gtex_brain_putamen_basal |
| rs66748093 | 3 | 45654358 | LARS2 | ENSG00000011376.5 | 4.469E-7 | 0 | 224360 | gtex_brain_putamen_basal |
| rs13089744 | 3 | 45656279 | LARS2 | ENSG00000011376.5 | 4.17E-6 | 0 | 226281 | gtex_brain_putamen_basal |
| rs13094153 | 3 | 45656562 | LARS2 | ENSG00000011376.5 | 4.146E-6 | 0 | 226564 | gtex_brain_putamen_basal |
| rs6808958 | 3 | 45662116 | LARS2 | ENSG00000011376.5 | 1.157E-7 | 0 | 232118 | gtex_brain_putamen_basal |
| rs4682791 | 3 | 45665194 | LARS2 | ENSG00000011376.5 | 1.157E-7 | 0 | 235196 | gtex_brain_putamen_basal |
| rs4401397 | 3 | 45671401 | LARS2 | ENSG00000011376.5 | 1.821E-6 | 0 | 241403 | gtex_brain_putamen_basal |
| rs2012762 | 3 | 45672871 | LARS2 | ENSG00000011376.5 | 3.449E-7 | 0 | 242873 | gtex_brain_putamen_basal |
| rs9311375 | 3 | 45675051 | LARS2 | ENSG00000011376.5 | 1.072E-6 | 0 | 245053 | gtex_brain_putamen_basal |
| rs4682794 | 3 | 45680259 | LARS2 | ENSG00000011376.5 | 2.436E-6 | 0 | 250261 | gtex_brain_putamen_basal |
| rs4234450 | 3 | 45682214 | LARS2 | ENSG00000011376.5 | 1.794E-6 | 0 | 252216 | gtex_brain_putamen_basal |
| rs4234451 | 3 | 45682406 | LARS2 | ENSG00000011376.5 | 1.812E-6 | 0 | 252408 | gtex_brain_putamen_basal |
| rs6765732 | 3 | 45685386 | LARS2 | ENSG00000011376.5 | 2.868E-6 | 0 | 255388 | gtex_brain_putamen_basal |
| rs4377516 | 3 | 45685515 | LARS2 | ENSG00000011376.5 | 2.859E-6 | 0 | 255517 | gtex_brain_putamen_basal |
| rs4362757 | 3 | 45687573 | LARS2 | ENSG00000011376.5 | 2.558E-6 | 0 | 257575 | gtex_brain_putamen_basal |
| rs9846544 | 3 | 45692901 | LARS2 | ENSG00000011376.5 | 1.712E-6 | 0 | 262903 | gtex_brain_putamen_basal |
| rs147911200 | 3 | 45703767 | LARS2 | ENSG00000011376.5 | 1.775E-6 | 0 | 273769 | gtex_brain_putamen_basal |
| rs2578665 | 3 | 45703797 | LARS2 | ENSG00000011376.5 | 1.543E-6 | 0 | 273799 | gtex_brain_putamen_basal |
| rs2118750 | 3 | 45710987 | LARS2 | ENSG00000011376.5 | 1.958E-6 | 0 | 280989 | gtex_brain_putamen_basal |
| rs2247771 | 3 | 45719209 | LARS2 | ENSG00000011376.5 | 1.222E-6 | 0 | 289211 | gtex_brain_putamen_basal |
| rs1883094 | 3 | 45730436 | LARS2 | ENSG00000011376.5 | 2.837E-6 | 0 | 300438 | gtex_brain_putamen_basal |
| rs7652042 | 3 | 45801726 | LARS2 | ENSG00000011376.5 | 2.698E-6 | 0 | 371728 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section III. Gene Ontology annotation
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|---|---|---|---|
| GO:0000166 | nucleotide binding | IEA | - | |
| GO:0005524 | ATP binding | IEA | - | |
| GO:0004823 | leucine-tRNA ligase activity | IEA | - | |
| GO:0016874 | ligase activity | IEA | - | |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0006429 | leucyl-tRNA aminoacylation | IEA | - | |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0005737 | cytoplasm | IEA | - | |
| GO:0005739 | mitochondrion | IEA | - | |
| GO:0005759 | mitochondrial matrix | IEA | - |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| KEGG VALINE LEUCINE AND ISOLEUCINE BIOSYNTHESIS | 11 | 8 | All SZGR 2.0 genes in this pathway |
| KEGG AMINOACYL TRNA BIOSYNTHESIS | 41 | 33 | All SZGR 2.0 genes in this pathway |
| REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | 21 | 17 | All SZGR 2.0 genes in this pathway |
| REACTOME TRNA AMINOACYLATION | 42 | 34 | All SZGR 2.0 genes in this pathway |
| ONKEN UVEAL MELANOMA DN | 526 | 357 | All SZGR 2.0 genes in this pathway |
| GARY CD5 TARGETS DN | 431 | 263 | All SZGR 2.0 genes in this pathway |
| TIEN INTESTINE PROBIOTICS 2HR DN | 88 | 53 | All SZGR 2.0 genes in this pathway |
| TIEN INTESTINE PROBIOTICS 6HR DN | 167 | 100 | All SZGR 2.0 genes in this pathway |
| TIEN INTESTINE PROBIOTICS 24HR UP | 557 | 331 | All SZGR 2.0 genes in this pathway |
| ELVIDGE HYPOXIA DN | 146 | 94 | All SZGR 2.0 genes in this pathway |
| ELVIDGE HIF1A TARGETS UP | 67 | 40 | All SZGR 2.0 genes in this pathway |
| LASTOWSKA NEUROBLASTOMA COPY NUMBER DN | 800 | 473 | All SZGR 2.0 genes in this pathway |
| DACOSTA UV RESPONSE VIA ERCC3 DN | 855 | 609 | All SZGR 2.0 genes in this pathway |
| DACOSTA UV RESPONSE VIA ERCC3 COMMON DN | 483 | 336 | All SZGR 2.0 genes in this pathway |
| PUJANA BRCA1 PCC NETWORK | 1652 | 1023 | All SZGR 2.0 genes in this pathway |
| NUYTTEN EZH2 TARGETS DN | 1024 | 594 | All SZGR 2.0 genes in this pathway |
| KANG IMMORTALIZED BY TERT UP | 89 | 61 | All SZGR 2.0 genes in this pathway |
| GALE APL WITH FLT3 MUTATED UP | 56 | 35 | All SZGR 2.0 genes in this pathway |
| YAGI AML FAB MARKERS | 191 | 131 | All SZGR 2.0 genes in this pathway |
| ACEVEDO METHYLATED IN LIVER CANCER DN | 940 | 425 | All SZGR 2.0 genes in this pathway |
| MOOTHA HUMAN MITODB 6 2002 | 429 | 260 | All SZGR 2.0 genes in this pathway |
| MOOTHA MITOCHONDRIA | 447 | 277 | All SZGR 2.0 genes in this pathway |
| BILANGES SERUM SENSITIVE GENES | 90 | 54 | All SZGR 2.0 genes in this pathway |