Search results: The pahtway p1609 has 557 genes in the original annotation. Currently, there are 332 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
8453CUL2-cullin 210p11.21CV:PGCnp
DMG:Wockner_2014
Network
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
8872CDC123C10orf7 | D123cell division cycle 12310p13CV:PGCnp
5209PFKFB3IPFK2 | PFK2 | iPFK-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 310p15.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
259230SGMS1MOB | MOB1 | SMS1 | TMEM23 | hmob33sphingomyelin synthase 110q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
100287932TIMM23TIM23translocase of inner mitochondrial membrane 2310q11.23DMG:Nishioka_2013
11130ZWINTHZwint-1 | KNTC2AP | SIP30 | ZWINT1ZW10 interacting kinetochore protein10q21-q22CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
7321UBE2D1E2(17)KB1 | SFT | UBC4/5 | UBCH5 | UBCH5Aubiquitin conjugating enzyme E2 D110q21.1CV:PGCnp
PMID:cooccur
5092PCBD1DCOH | PCBD | PCD | PHSpterin-4 alpha-carbinolamine dehydratase 110q22CV:PGCnp
56681SAR1ASAR1 | SARA1 | Sara | masra2secretion associated Ras related GTPase 1A10q22.1CV:PGCnp
DMG:Nishioka_2013
Network
23234DNAJC9HDJC9 | JDD1 | SB73DnaJ heat shock protein family (Hsp40) member C910q22.2DMG:Wockner_2014
PMID:cooccur
56652C10orf2ATXN8 | IOSCA | MTDPS7 | PEO | PEO1 | PEOA3 | PRLTS5 | SANDO | SCA8 | TWINLchromosome 10 open reading frame 210q24CV:PGCnp
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
10613ERLIN1C10orf69 | Erlin-1 | KE04 | KEO4 | SPFH1 | SPG62ER lipid raft associated 110q24.31CV:PGCnp
DMG:Jaffe_2016
5223PGAM1HEL-S-35 | PGAM-B | PGAMAphosphoglycerate mutase 110q25.3CV:GWASdb
CV:PGCnp
PMID:cooccur
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4942OATGACR | HOGA | OATASE | OKTornithine aminotransferase10q26CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
PMID:cooccur
1892ECHS1ECHS1D | SCEHenoyl-CoA hydratase, short chain, 1, mitochondrial10q26.2-q26.3CV:PGCnp
GSMA_IIA
Network
3632INPP5A5PTASEinositol polyphosphate-5-phosphatase A10q26.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
CompositeSet
26273FBXO3FBA | FBX3F-box protein 311p13CV:PGCnp
DMG:Wockner_2014
10553HTATIP2CC3 | SDR44U1 | TIP30HIV-1 Tat interactive protein 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10418SPON1VSGP/F-spondin | f-spondinspondin 111p15.2CV:GWASdb
CV:PGCnp
PMID:cooccur
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
79073TMEM109-transmembrane protein 10911q12.2DMG:vanEijk_2014
79080CCDC86-coiled-coil domain containing 8611q12.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
53838C11orf24DM4E3chromosome 11 open reading frame 2411q13CV:PGCnp
DMG:Wockner_2014
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
10072DPP3DPPIIIdipeptidyl peptidase 311q13.2CV:PGCnp
DMG:vanEijk_2014
Expression
Ascano FMRP targets
10432RBM14COAA | PSP2 | SIP | SYTIP1 | TMEM137RNA binding motif protein 1411q13.2CV:PGCnp
DMG:Nishioka_2013
1717DHCR7SLOS7-dehydrocholesterol reductase11q13.4CV:PGCnp
PMID:cooccur
11098PRSS23SIG13 | SPUVE | ZSIG13protease, serine 2311q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
23052ENDOD1-endonuclease domain containing 111q21CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
60496AASDHPPTAASD-PPT | ACPS | CGI-80 | LYS2 | LYS5aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase11q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
5805PTSPTPS6-pyruvoyltetrahydropterin synthase11q22.3GO_Annotation
GSMA_I
PMID:cooccur
23705CADM1BL2 | IGSF4 | IGSF4A | NECL2 | Necl-2 | RA175 | ST17 | SYNCAM | TSLC1 | sTSLC-1 | sgIGSF | synCAM1cell adhesion molecule 111q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
6876TAGLNSM22 | SMCC | TAGLN1 | WS3-10transgelin11q23.2GSMA_I
10632ATP5LATP5JGATP synthase, H+ transporting, mitochondrial Fo complex subunit G11q23.3Expression
GSMA_I
345APOC3APOCIII | HALP2apolipoprotein C-III11q23.3GSMA_I
PMID:cooccur
4162MCAMCD146 | MUC18melanoma cell adhesion molecule11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
51399TRAPPC4CGI-104 | HSPC172 | PTD009 | SBDN | SYNBINDIN | TRS23trafficking protein particle complex 411q23.3CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_I
9354UBE4AE4 | UBOX2 | UFD2ubiquitination factor E4A11q23.3CV:PGCnp
GSMA_I
9538EI24EPG4 | PIG8 | TP53I8EI24, autophagy associated transmembrane protein11q24CV:PGCnp
6768ST14ARCI11 | HAI | MT-SP1 | MTSP1 | PRSS14 | SNC19 | TADG15 | TMPRSS14suppression of tumorigenicity 1411q24-q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
51729WBP11NPWBP | PPP1R165 | SIPP1 | WBP-11WW domain binding protein 1112p12.3CV:PGCnp
51071DERACGI-26 | DEOCdeoxyribose-phosphate aldolase12p12.3CV:PGCnp
DMG:Wockner_2014
9700ESPL1ESP1 | SEPAextra spindle pole bodies like 1, separase12qCV:PGCnp
GO_Annotation
Ascano FMRP targets
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
113251LARP4PP13296La ribonucleoprotein domain family member 412q13.12CV:PGCnp
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
57460PPM1HARHCL1 | NERPP-2C | URCC2protein phosphatase, Mg2+/Mn2+ dependent 1H12q14.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
10330CNPY2HP10390 | MSAP | TMEM4 | ZSIG9canopy FGF signaling regulator 212q15CV:PGCnp
1466CSRP2CRP2 | LMO5 | SmLIMcysteine and glycine rich protein 212q21.1CV:PGCnp
DMG:Wockner_2014
7334UBE2NHEL-S-71 | UBC13 | UBCHBEN; UBC13 | UbcH-ben | UbcH13ubiquitin conjugating enzyme E2 N12q22CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
6926TBX3TBX3-ISO | UMS | XHLT-box 312q24.21CV:GWASdb
CV:PGCnp
5901RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family12q24.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
8099CDK2AP1DOC1 | DORC1 | ST19 | doc-1 | p12DOC-1cyclin-dependent kinase 2 associated protein 112q24.31CV:PGCnp
LK:YES
PMID:cooccur
8562DENRDRP | DRP1 | SMAP-3density-regulated protein12q24.31CV:PGCnp
DMG:Jaffe_2016
64897C12orf43-chromosome 12 open reading frame 4312q24.31CV:PGCnp
DMG:Jaffe_2016
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
29079MED4ARC36 | DRIP36 | HSPC126 | TRAP36 | VDRIPmediator complex subunit 413q14.2CV:PGCnp
DMG:Jaffe_2016
8803SUCLA2A-BETA | MTDPS5 | SCS-betaAsuccinate-CoA ligase, ADP-forming, beta subunit13q14.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10160FARP1CDEP | FARP1-IT1 | PLEKHC2 | PPP1R75FERM, ARH/RhoGEF and pleckstrin domain protein 113q32.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
23348DOCK9ZIZ1 | ZIZIMIN1dedicator of cytokinesis 913q32.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
11198SUPT16HCDC68 | FACTP140 | SPT16 | SPT16/CDC68SPT16 homolog, facilitates chromatin remodeling subunit14q11.2CV:PGCnp
GSMA_I
Potential synaptic genes
5687PSMA6IOTA | PROS27 | p27Kproteasome subunit alpha 614q13CV:GWASdb
CV:PGCnp
Network
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
2764GMFBGMFglia maturation factor beta14q22.2CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
93487MAPK1IP1LC14orf32 | MISS | c14_5346mitogen-activated protein kinase 1 interacting protein 1-like14q22.3CV:PGCnp
2079ERHDROERenhancer of rudimentary homolog (Drosophila)14q24.1DMG:Nishioka_2013
81892SLIRPC14orf156 | DC50 | PD04872SRA stem-loop interacting RNA binding protein14q24.3DMG:Jaffe_2016
87ACTN1BDPLT15actinin alpha 114q24|14q22-q24CV:PGCnp
CV:PheWAS
DMG:Nishioka_2013
DNM:Fromer_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
7443VRK1PCH1 | PCH1Avaccinia related kinase 114q32CV:PGCnpAscano FMRP targets
801CALM1CALML2 | CAMI | CPVT4 | DD132 | LQT14 | PHKD | caMcalmodulin 1 (phosphorylase kinase, delta)14q32.11ADT:Sun_2012
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_mGluR5
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51218GLRX5C14orf87 | FLB4739 | GRX5 | PR01238 | PRO1238 | PRSAglutaredoxin 514q32.13CV:PGCnp
DMG:Nishioka_2013
23405DICER1DCR1 | Dicer | Dicer1e | HERNA | K12H4.8-LIKE | MNG1 | RMSE2dicer 1 ribonuclease III14q32.13CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
9556C14orf2MP68 | PLPMchromosome 14 open reading frame 214q32.33CV:PGCnp
3653IPWNCRNA00002imprinted in Prader-Willi syndrome (non-protein coding)15q11.2CV:PGCnp
PMID:cooccur
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
27020NPTNGP55 | GP65 | SDFR1 | SDR1 | np55 | np65neuroplastin15q22CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
80349WDR61REC14 | SKI8WD repeat domain 6115q25.1CV:PGCnp
DMG:Nishioka_2013
Network
7026NR2F2ARP1 | CHTD4 | COUPTFB | COUPTFII | NF-E3 | NR2F1 | SVP40 | TFCOUP2nuclear receptor subfamily 2 group F member 215q26CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
9055PRC1ASE1protein regulator of cytokinesis 115q26.1CV:PGCnp
2521FUSALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLSFUS RNA binding protein16p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
5347PLK1PLK | STPK13polo like kinase 116p12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
112479ERI2EXOD1 | ZGRF5ERI1 exoribonuclease family member 216p12.3CV:PGCnp
GSMA_IIE
8303SNN-stannin16p13CV:PGCnp
DEG:Maycox_2009
123803NTAN1PNAA | PNADN-terminal asparagine amidase16p13.11CV:PGCnp
GSMA_IIE
PMID:cooccur
18ABATGABA-AT | GABAT | NPD0094-aminobutyrate aminotransferase16p13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
7874USP7HAUSP | TEF1ubiquitin specific peptidase 7 (herpes virus-associated)16p13.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
Ascano FMRP targets
23295MGRN1RNF156mahogunin ring finger 1, E3 ubiquitin protein ligase16p13.3CV:PGCnp
DMG:Montano_2016
79801SHCBP1PALSHC SH2-domain binding protein 116q11.2CV:PGCnp
GSMA_IIE
55027HEATR3SYO1HEAT repeat containing 316q12.1CV:GWASdb
CV:PGCnp
GSMA_IIE
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
8883NAE1A-116A10.1 | APPBP1 | HPP1 | ula-1NEDD8 activating enzyme E1 subunit 116q22CV:PGCnp
80777CYB5BCYB5-M | CYPB5M | OMB5cytochrome b5 type B (outer mitochondrial membrane)16q22.1CV:PGCnpG2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
51388NIP7CGI-37 | HSPC031 | KD93NIP7, nucleolar pre-rRNA processing protein16q22.1CV:PGCnp
DNM:McCarthy_2014
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
23536ADAT1HADAT1adenosine deaminase, tRNA specific 116q23.1CV:PGCnp
3281HSBP1NPC-A-13heat shock factor binding protein 116q23.3CV:PGCnp
10200MPHOSPH6MPP | MPP-6 | MPP6M-phase phosphoprotein 616q23.3CV:PGCnp
DMG:Jaffe_2016
Network
654780SFPQ-splicing factor proline/glutamine-rich16q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
51659GINS2HSPC037 | PSF2 | Pfs2GINS complex subunit 2 (Psf2 homolog)16q24.1CV:PGCnp
6687SPG7CAR | CMAR | PGN | SPG5CSPG7, paraplegin matrix AAA peptidase subunit16q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
51693TRAPPC2LHSPC176trafficking protein particle complex 2-like16q24.3CV:PGCnp
54849DEF8-differentially expressed in FDCP 8 homolog (mouse)16q24.3CV:PGCnp
50628GEMIN4HC56 | HCAP1 | HHRF-1 | p97gem nuclear organelle associated protein 417p13CV:PGCnp
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
4628MYH10NMMHC-IIB | NMMHCBmyosin, heavy chain 10, non-muscle17p13CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
30851TAX1BP3TIP-1 | TIP1Tax1 binding protein 317p13DMG:vanEijk_2014
Expression
6117RPA1HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70replication protein A117p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
708C1QBPGC1QBP | HABP1 | SF2p32 | gC1Q-R | gC1qR | p32complement component 1, q subcomponent binding protein17p13.3CV:PGCnp
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
5048PAFAH1B1LIS1 | LIS2 | MDCR | MDS | PAFAHplatelet activating factor acetylhydrolase 1b regulatory subunit 117p13.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
23531MMDMMA | MMD1 | PAQR11monocyte to macrophage differentiation-associated17qCV:PGCnp
PMID:cooccur
7283TUBG1CDCBM4 | GCP-1 | TUBG | TUBGCP1tubulin gamma 117q21CV:PGCnp
Network
4905NSFSKD2N-ethylmaleimide sensitive factor17q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5245PHBHEL-215 | HEL-S-54e | PHB1prohibitin17q21CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10197PSME3HEL-S-283 | Ki | PA28-gamma | PA28G | PA28gamma | REG-GAMMAproteasome activator subunit 317q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
11056DDX52HUSSY19 | ROK1DEAD-box helicase 5217q21.1CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
9862MED24ARC100 | CRSP100 | CRSP4 | DRIP100 | MED5 | THRAP4 | TRAP100mediator complex subunit 2417q21.1CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
4830NME1AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1NME/NM23 nucleoside diphosphate kinase 117q21.3CV:PGCnpCELL METABOLISM
CompositeSet
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
79902NUP85FROUNT | Nup75nucleoporin 85kDa17q25.1CV:PGCnp
DMG:Jaffe_2016
9775EIF4A3DDX48 | MUK34 | NMP265 | NUK34 | RCPS | eIF4AIIIeukaryotic translation initiation factor 4A317q25.3CV:PGCnp
PMID:cooccur
3613IMPA2-inositol(myo)-1(or 4)-monophosphatase 218p11.2Association
CV:PGCnp
CV:PheWAS
PMID:cooccur
79959CEP76C18orf9 | HsT1705centrosomal protein 76kDa18p11.21CV:PGCnp
81929SEH1LSEC13L | SEH1A | SEH1B | Seh1SEH1 like nucleoporin18p11.21CV:PGCnp
DMG:Wockner_2014
4729NDUFV2CI-24kNADH:ubiquinone oxidoreductase core subunit V218p11.22Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
9097USP14TGTubiquitin specific peptidase 1418p11.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
29086BABAM1C19orf62 | HSPC142 | MERIT40 | NBA1BRISC and BRCA1 A complex member 119p13.11CV:GWASdb
CV:PGCnp
PMID:cooccur
25804LSM4GRP | YER112WLSM4 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.11CV:GWASdb
CV:PGCnp
Network
7001PRDX2HEL-S-2a | NKEF-B | NKEFB | PRP | PRX2 | PRXII | PTX1 | TDPX1 | TPX1 | TSAperoxiredoxin 219p13.2CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
51079NDUFA13B16.6 | CDA016 | CGI-39 | GRIM-19 | GRIM19NADH:ubiquinone oxidoreductase subunit A1319p13.2CV:PGCnp
LK:YES
CompositeSet
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
51690LSM7YNL147WLSM7 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.3DMG:vanEijk_2014
Network
59286UBL5HUB1ubiquitin like 519p13.3CV:PGCnp
9667SAFB2-scaffold attachment factor B219p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
9141PDCD5TFAR19programmed cell death 519q13.11CV:PGCnp
DMG:Nishioka_2013
5184PEPDPROLIDASEpeptidase D19q13.11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5825ABCD3ABC43 | CBAS5 | PMP70 | PXMP1 | ZWS2ATP binding cassette subfamily D member 31p21.3CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1718DHCR24DCE | Nbla03646 | SELADIN1 | seladin-124-dehydrocholesterol reductase1p32.3CV:PGCnp
DMG:Montano_2016
GO_Annotation
6421SFPQPOMP100 | PPP1R140 | PSFsplicing factor proline/glutamine-rich1p34.3CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
998CDC42CDC42Hs | G25K | TKScell division cycle 421p36.1CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
10726NUDCHNUDC | MNUDC | NPD011nudC nuclear distribution protein1p36.11CV:PGCnp
DMG:Nishioka_2013
23435TARDBPALS10 | TDP-43TAR DNA binding protein1p36.22CV:PGCnp
PMID:cooccur
378708APITD1CENP-S | CENPS | FAAP16 | MHF1apoptosis-inducing, TAF9-like domain 11p36.22CV:PGCnp
DMG:Wockner_2014
9903KLHL21-kelch like family member 211p36.31CV:PGCnpAscano FMRP targets
54998AURKAIP1AIP | AKIP | MRP-S38aurora kinase A interacting protein 11p36.33DMG:Wockner_2014
8407TAGLN2HA1756transgelin 21q21-q25CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
Network
9939RBM8ABOV-1A | BOV-1B | BOV-1C | C1DELq21.1 | DEL1q21.1 | MDS014 | RBM8 | RBM8B | TAR | Y14 | ZNRP | ZRNP1RNA binding motif protein 8A1q21.1CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
103ADARADAR1 | AGS6 | DRADA | DSH | DSRAD | G1P1 | IFI-4 | IFI4 | K88DSRBP | P136adenosine deaminase, RNA-specific1q21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
2224FDPSFPPS | FPS | POROK9farnesyl diphosphate synthase1q22CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
4259MGST3GST-IIImicrosomal glutathione S-transferase 31q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
481ATP1B1ATP1BATPase Na+/K+ transporting subunit beta 11q24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
27101CACYBPGIG5 | PNAS-107 | S100A6BP | SIPcalcyclin binding protein1q24-q25CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
55827DCAF61200006M05Rik | ARCAP | IQWD1 | MSTP055 | NRIP | PC326DDB1 and CUL4 associated factor 61q24.2CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
9019MPZL1MPZL1b | PZR | PZR1b | PZRa | PZRbmyelin protein zero like 11q24.2Association
CV:PGCnp
PMID:cooccur
2752GLULGLNS | GS | PIG43 | PIG59glutamate-ammonia ligase1q31CV:PGCnp
Expression
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1116CHI3L1ASRT7 | CGP-39 | GP-39 | GP39 | HC-gp39 | HCGP-3P | YKL-40 | YKL40 | YYL-40 | hCGP-39chitinase 3 like 11q32.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
PMID:cooccur
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
56950SMYD2HSKM-B | KMT3C | ZMYND14SET and MYND domain containing 21q32.3CV:GWASdb
CV:PGCnp
23029RBM34-RNA binding motif protein 341q42.3DMG:Jaffe_2016
54453RIN2MACS | RASSF4Ras and Rab interactor 220p11.22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
23236PLCB1EIEE12 | PI-PLC | PLC-154 | PLC-I | PLC-beta-1 | PLC154 | PLCB1A | PLCB1Bphospholipase C beta 120p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
60493FASTKD5dJ1187M17.5FAST kinase domains 520p13DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
5111PCNAATLD2proliferating cell nuclear antigen20pter-p12Network
PMID:cooccur
1789DNMT3BICF | ICF1 | M.HsaIIIBDNA (cytosine-5-)-methyltransferase 3 beta20q11.2CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
10137RBM12HRIHFB2091 | SWANRNA binding motif protein 1220q11.21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
1525CXADRCAR | CAR4/6 | HCARcoxsackie virus and adenovirus receptor21q21.1CV:PGCnp
GO_Annotation
7485WRBCHD5 | GET1tryptophan rich basic protein21q22.3CV:PGCnp
DMG:Wockner_2014
4047LSSCTRCT44 | OSClanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)21q22.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
6576SLC25A1CTP | D2L2AD | SEA | SLC20A3solute carrier family 25 member 122q11.21CNV:YES
CV:PGCnp
DNM:Gulsuner_2013
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
9993DGCR2DGS-C | IDD | LAN | SEZ-12DiGeorge syndrome critical region gene 222q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
6634SNRPD3SMD3 | Sm-D3small nuclear ribonucleoprotein D3 polypeptide22q11.23CV:PGCnp
DMG:Nishioka_2013
GSMA_I
22880MORC2CMT2Z | ZCW3 | ZCWCC1MORC family CW-type zinc finger 222q12.2CV:PGCnp
GSMA_I
Ascano FMRP targets
9582APOBEC3BA3B | APOBEC1L | ARCD3 | ARP4 | DJ742C19.2 | PHRBNL | bK150C2.2apolipoprotein B mRNA editing enzyme catalytic subunit 3B22q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1727CYB5R3B5R | DIA1cytochrome b5 reductase 322q13.2CV:PGCnp
DMG:Jaffe_2016
158ADSLAMPS | ASASE | ASLadenylosuccinate lyase22q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
4700NDUFA6B14 | CI-B14 | LYRM6 | NADHB14NADH:ubiquinone oxidoreductase subunit A622q13.2CV:PGCnp
DMG:Jaffe_2016
9978RBX1BA554C12.1 | RNF75 | ROC1ring-box 1, E3 ubiquitin protein ligase22q13.2CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
11252PACSIN2SDPIIprotein kinase C and casein kinase substrate in neurons 222q13.2-q13.33CV:PGCnp
DEG:Sanders_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
25813SAMM50CGI-51 | OMP85 | SAM50 | TOB55 | TRG-3 | YNL026WSAMM50 sorting and assembly machinery component22q13.31CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
10128LRPPRCCLONE-23970 | GP130 | LRP130 | LSFCleucine rich pentatricopeptide repeat containing2p21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10602CDC42EP3BORG2 | CEP3 | UB1CDC42 effector protein 32p21CV:GWASdb
CV:PGCnp
PMID:cooccur
5281PIGF-phosphatidylinositol glycan anchor biosynthesis class F2p21-p16CV:PGCnp
PMID:cooccur
6432SRSF79G8 | AAG3 | SFRS7serine/arginine-rich splicing factor 72p22.1CV:PGCnp
25940FAM98A-family with sequence similarity 98 member A2p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
8884SLC5A6SMVTsolute carrier family 5 member 62p23CV:PGCnp
DMG:Wockner_2014
55006TRMT61B-tRNA methyltransferase 61B2p23.2CV:PGCnp
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
10971YWHAQ14-3-3 | 1C5 | HS1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta2p25.1CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
55256ADI1APL1 | ARD | Fe-ARD | HMFT1638 | MTCBP1 | Ni-ARD | SIPL | mtnDacireductone dioxygenase 12p25.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
81562LMAN2LVIPLlectin, mannose binding 2 like2q11.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
23397NCAPHBRRN1 | CAP-Hnon-SMC condensin I complex subunit H2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
56910STARD7GTT1StAR related lipid transfer domain containing 72q11.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
9448MAP4K4FLH21957 | HEL-S-31 | HGK | MEKKK4 | NIKmitogen-activated protein kinase kinase kinase kinase 42q11.2-q12CV:PGCnp
DMG:Nishioka_2013
DNM:Guipponi_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1622DBIACBD1 | ACBP | CCK-RP | EPdiazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)2q12-q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
7247TSNBCLF-1 | C3PO | RCHF1 | REHF-1 | TBRBP | TRSLNtranslin2q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
55041PLEKHB2EVT2pleckstrin homology domain containing B22q21.1CV:PGCnp
GSMA_I
GSMA_IIA
79675FASTKD1-FAST kinase domains 12q31CV:PGCnp
DMG:Wockner_2014
57405SPC25AD024 | SPBC25 | hSpc25SPC25, NDC80 kinetochore complex component2q31.1CV:GWASdb
CV:PGCnp
GSMA_IIA
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
23150FRMD4B6030440G05Rik | GRSP1FERM domain containing 4B3p14.1CV:PGCnp
Expression
7110TMF1ARA160 | TMFTATA element modulatory factor 13p14.1CV:PGCnp
DMG:Nishioka_2013
1605DAG1156DAG | A3a | AGRNR | DAG | MDDGA9 | MDDGC7 | MDDGC9dystroglycan 13p21CV:PGCnp
DMG:Jaffe_2016
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
5162PDHBPDHBD | PDHE1-B | PHE1Bpyruvate dehydrogenase (lipoamide) beta3p21.1-p14.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
80335WDR82MST107 | MSTP107 | PRO2730 | PRO34047 | SWD2 | TMEM113 | WDR82AWD repeat domain 823p21.2CV:PGCnp
DMG:Wockner_2014
LK:YES
23395LARS2LEURS | PRLTS4 | mtLeuRSleucyl-tRNA synthetase 2, mitochondrial3p21.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
25994HIGD1AHIG1 | RCF1aHIG1 hypoxia inducible domain family member 1A3p22.1CV:PGCnp
DMG:Jaffe_2016
7155TOP2BTOPIIB | top2betatopoisomerase (DNA) II beta3p24CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
27258LSM3SMX4 | USS2 | YLR438CLSM3 homolog, U6 small nuclear RNA and mRNA degradation associated3p25.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
CompositeSet
7372UMPSOPRTuridine monophosphate synthetase3q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4071TM4SF1H-L6 | L6 | M3S1 | TAAL6transmembrane 4 L six family member 13q21-q25DMG:Wockner_2014
57493HEG1HEG | MST112 | MSTP112heart development protein with EGF like domains 13q21.2CV:PGCnp
5361PLXNA1NOV | NOVP | PLEXIN-A1 | PLXN1plexin A13q21.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
27032ATP2C1ATP2C1A | BCPM | HHD | PMR1 | SPCA1 | hSPCA1ATPase secretory pathway Ca2+ transporting 13q22.1CV:PGCnp
DMG:vanEijk_2014
30849PIK3R4VPS15 | p150phosphoinositide-3-kinase regulatory subunit 43q22.1CV:PGCnpAscano FMRP targets
5708PSMD2P97 | RPN1 | S2 | TRAP2proteasome 26S subunit, non-ATPase 23q27.1CV:PGCnp
DNM:Fromer_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
347APOD-apolipoprotein D3q29CV:PGCnp
PMID:cooccur
CompositeSet
4976OPA1MGM1 | NPG | NTG | largeGOPA1, mitochondrial dynamin like GTPase3q29CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
CompositeSet
54951COMMD8-COMM domain containing 84p12CV:PGCnp
DMG:Wockner_2014
5860QDPRDHPR | PKU2 | SDR33C1quinoid dihydropteridine reductase4p15.31CV:GWASdb
CV:PGCnp
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
4043LRPAP1A2MRAP | A2RAP | HBP44 | MRAP | MYP23 | RAP | alpha-2-MRAPLDL receptor related protein associated protein 14p16.3CV:PGCnp
PMID:cooccur
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
1977EIF4EAUTS19 | CBP | EIF4E1 | EIF4EL1 | EIF4F | eIF-4Eeukaryotic translation initiation factor 4E4q23CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
4258MGST2GST2 | MGST-IImicrosomal glutathione S-transferase 24q28.3CV:PGCnp
8467SMARCA5ISWI | SNF2H | WCRF135 | hISWI | hSNF2HSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 54q31.1-q31.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
9693RAPGEF2CNrasGEF | NRAPGEP | PDZ-GEF1 | PDZGEF1 | RA-GEF | RA-GEF-1 | Rap-GEP | nRap GEPRap guanine nucleotide exchange factor 24q32.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
291SLC25A4AAC1 | ANT | ANT 1 | ANT1 | MTDPS12 | PEO2 | PEO3 | PEOA2 | T1solute carrier family 25 member 44q35CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
3157HMGCS1HMGCS3-hydroxy-3-methylglutaryl-CoA synthase 15p12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10605PAIP1-poly(A) binding protein interacting protein 15p12CV:PGCnp
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
1601DAB2DOC-2 | DOC2Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)5p13.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
29102DROSHAETOHI2 | HSA242976 | RANSE3L | RN3 | RNASE3L | RNASENdrosha ribonuclease III5p13.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
4552MTRRMSR | cblE5-methyltetrahydrofolate-homocysteine methyltransferase reductase5p15.31CV:PGCnp
PMID:cooccur
79888LPCAT1AGPAT10 | AGPAT9 | AYTL2 | PFAAP3 | lpcatlysophosphatidylcholine acyltransferase 15p15.33CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
54505DHX29DDX29DEAH-box helicase 295q11.2DMG:Wockner_2014
27292DIMT1DIM1 | DIMT1L | HSA9761 | HUSSY5DIM1 dimethyladenosine transferase 1 homolog5q12.1CV:PGCnp
DMG:Jaffe_2016
3156HMGCRLDLCQ33-hydroxy-3-methylglutaryl-CoA reductase5q13.3-q14CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
9765ZFYVE16PPP1R69zinc finger FYVE-type containing 165q14CV:PGCnp
DMG:Jaffe_2016
1070CETN3CDC31 | CEN3centrin 35q14.3CV:PGCnp
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7905REEP5C5orf18 | D5S346 | DP1 | TB2 | YOP1 | Yip2ereceptor accessory protein 55q22.2CV:PGCnp
DMG:Jaffe_2016
Expression
10949HNRNPA0HNRPA0heterogeneous nuclear ribonucleoprotein A05q31CV:PGCnp
GSMA_I
501ALDH7A1ATQ1 | EPD | PDEaldehyde dehydrogenase 7 family member A15q31CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
2107ETF1D5S1995 | ERF | ERF1 | RF1 | SUP45L1 | TB3-1eukaryotic translation termination factor 15q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
Expression
GSMA_I
Network
4695NDUFA2B8 | CD14 | CIB8NADH:ubiquinone oxidoreductase subunit A25q31.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
3035HARSCMT2W | HRS | USH3Bhistidyl-tRNA synthetase5q31.3CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
206358SLC36A1Dct1 | LYAAT1 | PAT1 | TRAMD3solute carrier family 36 member 15q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
10146G3BP1G3BP | HDH-VIIIG3BP stress granule assembly factor 15q33.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
7265TTC1TPR1tetratricopeptide repeat domain 15q33.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
79646PANK3-pantothenate kinase 35q34CV:PGCnp
GSMA_IIA
5917RARSArgRS | DALRD1 | HLD9arginyl-tRNA synthetase5q35.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
PMID:cooccur
51121RPL26L1RPL26P1ribosomal protein L26 like 15q35.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_IIA
8992ATP6V0E1ATP6H | ATP6V0E | M9.2 | Vma21 | Vma21pATPase H+ transporting V0 subunit e15q35.1CV:PGCnp
GSMA_IIA
4488MSX2CRS2 | FPP | HOX8 | MSH | PFM | PFM1msh homeobox 25q35.2CV:PGCnp
GSMA_IIA
PMID:cooccur
3182HNRNPABABBP1 | HNRPABheterogeneous nuclear ribonucleoprotein A/B5q35.3CV:GWASdb
CV:PGCnp
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
28978TMEM14AC6orf73 | PTD011transmembrane protein 14A6p12.2CV:PGCnp
GSMA_IIE
23787MTCH1CGI-64 | PIG60 | PSAP | SLC25A49mitochondrial carrier 16p21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
28973MRPS18BC6orf14 | HSPC183 | HumanS18a | MRP-S18-2 | MRPS18-2 | PTD017 | S18amtmitochondrial ribosomal protein S18B6p21.3DMG:Jaffe_2016
GSMA_I
6882TAF11MGC:15243 | PRO2134 | TAF2I | TAFII28TATA-box binding protein associated factor 116p21.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIE
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
55856ACOT13HT012 | PNAS-27 | THEM2acyl-CoA thioesterase 136p22.3CV:PGCnp
GSMA_I
7280TUBB2ACDCBM5 | TUBB | TUBB2tubulin beta 2A class IIa6p25CV:PGCnp
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
57128LYRM4C6orf149 | CGI-203 | COXPD19 | ISD11LYR motif containing 46p25.1DMG:Wockner_2014
GSMA_I
PMID:cooccur
10492SYNCRIPGRY-RBP | GRYRBP | HNRNPQ | HNRPQ1 | NSAP1 | PP68 | hnRNP-Qsynaptotagmin binding, cytoplasmic RNA interacting protein6q14-q15CV:PGCnp
9324HMGN3PNAS-24 | PNAS-25 | TRIP7high mobility group nucleosomal binding domain 36q14.1CV:PGCnp
DMG:Wockner_2014
57226LYRM2DJ122O8.2LYR motif containing 26q15CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
262AMD1ADOMETDC | AMD | SAMDCadenosylmethionine decarboxylase 16q21CV:PGCnp
DMG:Wockner_2014
8724SNX3Grd19 | MCOPS8 | SDP3sorting nexin 36q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
9749PHACTR2C6orf56phosphatase and actin regulator 26q24.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
8504PEX3PBD10A | TRG18peroxisomal biogenesis factor 36q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5110PCMT1PIMTprotein-L-isoaspartate (D-aspartate) O-methyltransferase6q25.1CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
26271FBXO5EMI1 | FBX5 | Fbxo31F-box protein 56q25.2CV:GWASdb
CV:PGCnp
39ACAT2-acetyl-CoA acetyltransferase 26q25.3CV:PGCnp
PMID:cooccur
1644DDCAADCdopa decarboxylase7p12.2CV:PGCnp
PMID:cooccur
DOPAMINE
SEROTONIN
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
54468MIOS-missing oocyte, meiosis regulator, homolog (Drosophila)7p21.3CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
PMID:cooccur
4521NUDT1MTH1nudix hydrolase 17p22CV:PGCnp
LK:YES
5982RFC2RFC40replication factor C subunit 27q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
51593SRRTARS2 | ASR2 | serrateserrate, RNA effector molecule7q21CV:PGCnp
PMID:cooccur
Ascano FMRP targets
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
5445PON2-paraoxonase 27q21.3CV:GWASdb
CV:PGCnp
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
4698NDUFA5B13 | CI-13KD-B | CI-13kB | NUFM | UQOR13NADH:ubiquinone oxidoreductase subunit A57q31.33CV:PGCnp
DMG:Nishioka_2013
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
51125GOLGA7GCP16 | GOLGA3AP1 | GOLGA7A | HSPC041golgin A78p11.21CV:PGCnp
DMG:Montano_2016
9583ENTPD4LALP70 | LAP70 | LYSAL1 | NTPDase-4 | UDPaseectonucleoside triphosphate diphosphohydrolase 48p21.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
427ASAH1AC | ACDase | ASAH | PHP | PHP32 | SMAPMEN-acylsphingosine amidohydrolase (acid ceramidase) 18p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
55326AGPAT51AGPAT5 | LPAATE1-acylglycerol-3-phosphate O-acyltransferase 58p23.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
8836GGHGHgamma-glutamyl hydrolase8q12.3CV:PGCnp
DMG:Jaffe_2016
28957MRPS28HSPC007 | MRP-S28 | MRP-S35 | MRPS35mitochondrial ribosomal protein S288q21.1-q21.2CV:PGCnp
DEG:Maycox_2009
3301DNAJA1DJ-2 | DjA1 | HDJ2 | HSDJ | HSJ-2 | HSJ2 | HSPF4 | NEDD7 | hDJ-2DnaJ heat shock protein family (Hsp40) member A19p13.3CV:PGCnp
Expression
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
51510CHMP5C9orf83 | CGI-34 | HSPC177 | PNAS-2 | SNF7DC2 | Vps60charged multivesicular body protein 59p13.3CV:PGCnp
2731GLDCGCE | GCSP | HYGN1glycine dehydrogenase (decarboxylating)9p22CV:GWASdb
CV:PGCnp
6505SLC1A1DCBXA | EAAC1 | EAAT3 | SCZD18solute carrier family 1 member 19p24CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
9830TRIM14-tripartite motif containing 149q22.33CV:PGCnp
DMG:Wockner_2014
84263HSDL2C9orf99 | SDR13C1hydroxysteroid dehydrogenase like 29q32CV:PGCnp
4702NDUFA8CI-19KD | CI-PGIV | PGIVNADH:ubiquinone oxidoreductase subunit A89q33.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
51116MRPS2CGI-91 | MRP-S2 | S2mtmitochondrial ribosomal protein S29q34CV:PGCnp
DMG:Jaffe_2016
10422UBAC1GBDR1 | UBADC1UBA domain containing 19q34.3CV:GWASdb
CV:PGCnp
10682EBPCDPX2 | CHO2 | CPX | CPXD | MENDemopamil binding protein (sterol isomerase)Xp11.23-p11.22CV:PGCnp
PMID:cooccur
6102RP2DELXp11.3 | NM23-H10 | NME10 | TBCCD2 | XRP2retinitis pigmentosa 2 (X-linked recessive)Xp11.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1654DDX3XCAP-Rf | DBX | DDX14 | DDX3 | HLP2 | MRX102DEAD-box helicase 3, X-linkedXp11.3-p11.23CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
27336HTATSF1TAT-SF1 | TATSF1 | dJ196E23.2HIV-1 Tat specific factor 1Xq26.3CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet