Search results: The pahtway p2122 has 855 genes in the original annotation. Currently, there are 609 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

Because the gene page contains a lot of information, it takes on average 3-5 seconds to load. So when you click a gene ID, please be patient for the page to load.

Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6935ZEB1AREB6 | BZP | DELTAEF1 | FECD6 | NIL2A | PPCD3 | TCF8 | ZFHEP | ZFHX1Azinc finger E-box binding homeobox 110p11.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
10006ABI1ABI-1 | ABLBP4 | E3B1 | NAP1BP | SSH3BP | SSH3BP1abl interactor 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
8453CUL2-cullin 210p11.21CV:PGCnp
DMG:Wockner_2014
Network
56288PARD3ASIP | Baz | PAR3 | PAR3alpha | PARD-3 | PARD3A | PPP1R118 | SE2-5L16 | SE2-5LT1 | SE2-5T2par-3 family cell polarity regulator10p11.21CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
Ascano FMRP targets
94134ARHGAP12-Rho GTPase activating protein 1210p11.22CV:PGCnp
DMG:Wockner_2014
5305PIP4K2API5P4KA | PIP5K2A | PIP5KII-alpha | PIP5KIIA | PIPKphosphatidylinositol-5-phosphate 4-kinase, type II, alpha10p12.2Association
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
221061FAM171A1C10orf38family with sequence similarity 171 member A110p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
Ascano FMRP targets
Potential synaptic genes
9397NMT2-N-myristoyltransferase 210p13CV:PGCnpAscano FMRP targets
10771ZMYND11BRAM1 | BS69 | MRD30zinc finger MYND-type containing 1110p14CV:PGCnp
DNM:Fromer_2014
CompositeSet
22944KINBTCD | KIN17 | Rts2Kin17 DNA and RNA binding protein10p14CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
26019UPF2HUPF2 | RENT2 | smg-3UPF2 regulator of nonsense transcripts homolog (yeast)10p14-p13CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
Ascano FMRP targets
1316KLF6BCD1 | CBA1 | COPEB | CPBP | GBF | PAC1 | ST12 | ZF9Kruppel-like factor 610p15Association
CV:PGCnp
DMG:Jaffe_2016
23185LARP4BKIAA0217 | LARP5La ribonucleoprotein domain family member 4B10p15.3CV:PGCnp
22884WDR37-WD repeat domain 3710p15.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
22943DKK1DKK-1 | SKdickkopf WNT signaling pathway inhibitor 110q11.2CV:PGCnp
PMID:cooccur
259230SGMS1MOB | MOB1 | SMS1 | TMEM23 | hmob33sphingomyelin synthase 110q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5599MAPK8JNK | JNK-46 | JNK1 | JNK1A2 | JNK21B1/2 | PRKM8 | SAPK1 | SAPK1cmitogen-activated protein kinase 810q11.22CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
84159ARID5BDESRT | MRF-2 | MRF2AT-rich interaction domain 5B10q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
9469CHST3C6ST | C6ST1 | HSDcarbohydrate (chondroitin 6) sulfotransferase 310q22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5532PPP3CBCALNA2 | CALNB | CNA2 | PP2Bbetaprotein phosphatase 3 catalytic subunit beta10q22.2PMID:cooccurINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
23522KAT6BGTPTS | MORF | MOZ2 | MYST4 | ZC2HC6B | qkf | querkopflysine acetyltransferase 6B10q22.2CV:PGCnp
DMG:Jaffe_2016
Expression
7414VCLCMD1W | CMH15 | HEL114 | MV | MVCLvinculin10q22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
657BMPR1A10q23del | ACVRLK3 | ALK3 | CD292 | SKR5bone morphogenetic protein receptor type 1A10q22.3CV:PGCnp
57178ZMIZ1MIZ | RAI17 | TRAFIP10 | ZIMP10 | hZIMP10zinc finger MIZ-type containing 110q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
5728PTEN10q23del | BZS | CWS1 | DEC | GLM2 | MHAM | MMAC1 | PTEN1 | TEP1phosphatase and tensin homolog10q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
26509MYOFFER1L3myoferlin10q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
8729GBF1ARF1GEFgolgi brefeldin A resistant guanine nucleotide exchange factor 110q24CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
8945BTRCBETA-TRCP | FBW1A | FBXW1 | FBXW1A | FWD1 | bTrCP | bTrCP1 | betaTrCPbeta-transducin repeat containing E3 ubiquitin protein ligase10q24.32CV:PGCnp
22978NT5C2GMP | NT5B | PNT5 | SPG45 | SPG65 | cN-II5'-nucleotidase, cytosolic II10q24.32CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
9748SLKLOSK | STK2 | bA16H23.1 | se20-9STE20 like kinase10q24.33CV:PGCnp
DMG:Jaffe_2016
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1847DUSP5DUSP | HVH3dual specificity phosphatase 510q25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6934TCF7L2TCF-4 | TCF4transcription factor 7 like 210q25.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
2869GRK5GPRK5G protein-coupled receptor kinase 510q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
22876INPP5FMSTP007 | MSTPO47 | SAC2 | hSAC2inositol polyphosphate-5-phosphatase F10q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
9793CKAP5CHTOG | MSPS | TOG | TOGp | ch-TOGcytoskeleton associated protein 511p11.2CV:PGCnp
CV:PheWAS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
51317PHF21ABHC80 | BM-006PHD finger protein 21A11p11.2CV:PGCnp
PMID:cooccur
23279NUP160-nucleoporin 160kDa11p11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
54765TRIM44DIPB | HSA249128 | MC7tripartite motif containing 4411p13CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
6764ST5DENND2B | HTS1 | p126suppression of tumorigenicity 511p15CV:PGCnp
DMG:Wockner_2014
10196PRMT3HRMT1L3protein arginine methyltransferase 311p15.1CV:PGCnp
DMG:Jaffe_2016
7003TEAD1AA | NTEF-1 | REF1 | TCF-13 | TCF13 | TEAD-1 | TEF-1TEA domain transcription factor 111p15.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
22800RRAS2TC21related RAS viral (r-ras) oncogene homolog 211p15.2CV:PGCnp
DMG:Wockner_2014
23258DENND5ARAB6IP1DENN domain containing 5A11p15.4CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4928NUP98ADIR2 | NUP196 | NUP96nucleoporin 98kDa11p15.5CV:PGCnp
DNM:McCarthy_2014
CompositeSet
Darnell FMRP targets
5286PIK3C2ACPK | PI3-K-C2(ALPHA) | PI3-K-C2Aphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha11p15.5-p14CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
10413YAP1COB1 | YAP | YAP2 | YAP65 | YKIYes associated protein 111q13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
Network
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
8500PPFIA1LIP.1 | LIP1 | LIPRINPTPRF interacting protein alpha 111q13.3CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
26005C2CD3OFD14C2 calcium-dependent domain containing 311q13.4CV:PGCnpAscano FMRP targets
23201FAM168AKIAA0280 | TCRP1family with sequence similarity 168 member A11q13.4CV:PGCnp
1662DDX10HRH-J8DEAD-box helicase 1011q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
5962RDXDFNB24radixin11q23CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_I
23387SIK3L19 | QSK | SIK-3SIK family kinase 311q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
5927KDM5ARBBP-2 | RBBP2 | RBP2lysine demethylase 5A12p11CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
636BICD1BICDbicaudal D homolog 1 (Drosophila)12p11.2-p11.1CV:GWASdb
CV:PGCnp
PMID:cooccur
1027CDKN1BCDKN4 | KIP1 | MEN1B | MEN4 | P27KIP1cyclin-dependent kinase inhibitor 1B12p13.1-p12CV:PGCnp
Network
PMID:cooccur
23085ERC1Cast2 | ELKS | ERC-1 | RAB6IP2ELKS/RAB6-interacting/CAST family member 112p13.3CV:GWASdb
CV:PGCnp
GO_Annotation
PROTEIN CLUSTERING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
51347TAOK3DPK | JIK | MAP3K18TAO kinase 312qCV:PGCnp
4891SLC11A2DCT1 | DMT1 | NRAMP2solute carrier family 11 member 212q13CV:PGCnp
PMID:cooccur
9194SLC16A7MCT2solute carrier family 16 member 712q13CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
113251LARP4PP13296La ribonucleoprotein domain family member 412q13.12CV:PGCnp
22864R3HDM2CAG6 | PR01365R3H domain containing 212q13.3CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
114882OSBPL8MST120 | MSTP120 | ORP8 | OSBP10oxysterol binding protein like 812q14CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
55832CAND1TIP120 | TIP120Acullin-associated and neddylation-dissociated 112q14CV:GWASdb
CV:PGCnp
RNA AND PROTEIN SYNTHESIS
CompositeSet
Darnell FMRP targets
9958USP15UNPH-2 | UNPH4ubiquitin specific peptidase 1512q14CV:PGCnp
4848CNOT2CDC36 | HSPC131 | NOT2 | NOT2HCCR4-NOT transcription complex subunit 212q15CV:PGCnp
DMG:Wockner_2014
5074PAWRPAR4 | Par-4pro-apoptotic WT1 regulator12q21Association
CV:PGCnp
PMID:cooccur
23011RAB21-RAB21, member RAS oncogene family12q21.1CV:PGCnp
DMG:Nishioka_2013
INTRACELLULAR TRAFFICKING
23390ZDHHC17HIP14 | HIP3 | HSPC294 | HYPHzinc finger DHHC-type containing 1712q21.2CV:PGCnp
DMG:Wockner_2014
Network
490ATP2B1PMCA1 | PMCA1kbATPase plasma membrane Ca2+ transporting 112q21.3CV:PGCnp
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1407CRY1PHLL1cryptochrome circadian clock 112q23-q24.1CV:PGCnp
PMID:cooccur
7296TXNRD1GRIM-12 | TR | TR1 | TRXR1 | TXNRthioredoxin reductase 112q23.3CV:PGCnp
9612NCOR2CTG26 | N-CoR2 | SMAP270 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC | TRAC-1 | TRAC1nuclear receptor corepressor 212q24CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
CompositeSet
Darnell FMRP targets
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
6311ATXN2ASL13 | ATX2 | SCA2 | TNRC13ataxin 212q24.1CV:PGCnp
CV:PheWAS
Network
PMID:cooccur
23389MED13LMRFACD | PROSIT240 | THRAP2 | TRAP240Lmediator complex subunit 13 like12q24.21CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
6249CLIP1CLIP | CLIP-170 | CLIP170 | CYLN1 | RSNCAP-Gly domain containing linker protein 112q24.3CV:PGCnp
DMG:Wockner_2014
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
23141ANKLE2KIAA0692 | LEMD7 | Lem4 | MCPH16ankyrin repeat and LEM domain containing 212q24.33CV:PGCnp
DMG:Wockner_2014
10810WASF3Brush-1 | SCAR3 | WAVE3WAS protein family member 313q12CV:PGCnp
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
26278SACSARSACS | DNAJC29 | PPP1R138 | SPAX6sacsin molecular chaperone13q12CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
23047PDS5BAPRIN | AS3 | CG008PDS5 cohesin associated factor B13q12.3CV:PGCnpCompositeSet
Darnell FMRP targets
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
6541SLC7A1ATRC1 | CAT-1 | ERR | HCAT1 | REC1Lsolute carrier family 7 member 113q12.3CV:PGCnp
DMG:Wockner_2014
Expression
10443N4BP2L292M18.3 | CG005 | CG016 | PFAAP5NEDD4 binding protein 2-like 213q13.1CV:PGCnp
DNM:Gulsuner_2013
Expression
90627STARD13ARHGAP37 | DLC2 | GT650 | LINC00464StAR related lipid transfer domain containing 1313q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
11193WBP4FBP21WW domain binding protein 413q14.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
11215AKAP11AKAP-11 | AKAP220 | PPP1R44 | PRKA11A-kinase anchoring protein 1113q14.11CV:PGCnp
22862FNDC3AFNDC3 | HUGO | bA203I16.1 | bA203I16.5fibronectin type III domain containing 3A13q14.2CV:PGCnp
DMG:vanEijk_2014
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
3839KPNA3IPOA4 | SRP1 | SRP1gamma | SRP4 | hSRP1karyopherin subunit alpha 313q14.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
23077MYCBP2Myc-bp2 | PAM | PhrMYC binding protein 2, E3 ubiquitin protein ligase13q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
10464PIBF1C13orf24 | CEP90 | PIBFprogesterone immunomodulatory binding factor 113q22.1CV:PGCnp
8428STK24HEL-S-95 | MST3 | MST3B | STE20 | STK3serine/threonine kinase 2413q31.2-q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
5095PCCA-propionyl-CoA carboxylase alpha subunit13q32CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
23348DOCK9ZIZ1 | ZIZIMIN1dedicator of cytokinesis 913q32.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
728215FAM155A-family with sequence similarity 155 member A13q33.3CV:GWASdb
CV:PGCnp
8874ARHGEF7BETA-PIX | COOL-1 | COOL1 | Nbla10314 | P50 | P50BP | P85 | P85COOL1 | P85SPR | PAK3 | PIXBRho guanine nucleotide exchange factor 713q34CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
8881CDC16ANAPC6 | APC6 | CDC16Hs | CUT9cell division cycle 1613q34CV:GWASdb
CV:PGCnp
7528YY1DELTA | INO80S | NF-E1 | UCRBP | YIN-YANG-1YY1 transcription factor14qCV:PGCnp
Network
PMID:cooccur
11177BAZ1AACF1 | WALp1 | WCRF180 | hACF1bromodomain adjacent to zinc finger domain 1A14q13.2CV:GWASdb
CV:PGCnp
6655SOS2NS9SOS Ras/Rho guanine nucleotide exchange factor 214q21CV:PGCnp
DNM:Gulsuner_2013
10979FERMT2KIND2 | MIG2 | PLEKHC1 | UNC112 | UNC112B | mig-2fermitin family member 214q22.1CV:PGCnp
DMG:Wockner_2014
Expression
11183MAP4K5GCKR | KHS | KHS1 | MAPKKKK5mitogen-activated protein kinase kinase kinase kinase 514q22.1CV:PGCnp
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
5529PPP2R5E-protein phosphatase 2 regulatory subunit B', epsilon14q23.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5926ARID4ARBBP-1 | RBBP1 | RBP-1 | RBP1AT-rich interaction domain 4A14q23.1CV:PGCnp
23002DAAM1-dishevelled associated activator of morphogenesis 114q23.1Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3091HIF1AHIF-1-alpha | HIF-1A | HIF-1alpha | HIF1 | HIF1-ALPHA | MOP1 | PASD8 | bHLHe78hypoxia inducible factor 1 alpha subunit14q23.2CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
26037SIPA1L1E6TP1signal-induced proliferation-associated 1 like 114q24.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2530FUT8-fucosyltransferase 8 (alpha (1,6) fucosyltransferase)14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
8650NUMBC14orf41 | S171 | c14_5527numb homolog (Drosophila)14q24.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Potential synaptic genes
79882ZC3H14MSUT-2 | NY-REN-37 | SUT2 | UKp68zinc finger CCCH-type containing 1414q31.3CV:PGCnp
DMG:Wockner_2014
1112FOXN3C14orf116 | CHES1 | PRO1635forkhead box N314q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7443VRK1PCH1 | PCH1Avaccinia related kinase 114q32CV:PGCnpAscano FMRP targets
23405DICER1DCR1 | Dicer | Dicer1e | HERNA | K12H4.8-LIKE | MNG1 | RMSE2dicer 1 ribonuclease III14q32.13CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
84193SETD3C14orf154SET domain containing 314q32.2CV:PGCnp
DMG:Jaffe_2016
3831KLC1KLC | KNS2 | KNS2Akinesin light chain 114q32.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
INTRACELLULAR TRAFFICKING
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23186RCOR1COREST | RCORREST corepressor 114q32.31CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
4140MARK3CTAK1 | KP78 | PAR1A | Par-1amicrotubule affinity regulating kinase 314q32.32CV:PGCnp
DMG:vanEijk_2014
Potential synaptic genes
4734NEDD4NEDD4-1 | RPF1neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase15qCV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7337UBE3AANCR | AS | E6-AP | EPVE6AP | HPVE6Aubiquitin protein ligase E3A15q11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
4212MEIS2HsT18361 | MRG1Meis homeobox 215q14CV:PGCnp
PMID:cooccur
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
7158TP53BP153BP1 | TDRD30 | TP53 | p202 | p53BP1tumor protein p53 binding protein 115q15-q21CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
25963TMEM87A-transmembrane protein 87A15q15.1CV:PGCnp
9728SECISBP2LSBP2L | SLANSECIS binding protein 2 like15q21.1CV:PGCnpCompositeSet
Darnell FMRP targets
2585GALK2GK2galactokinase 215q21.1-q21.2CV:PGCnp
DMG:Jaffe_2016
23312DMXL2PEPNS | RC3Dmx like 215q21.2CV:PGCnp
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
CompositeSet
Darnell FMRP targets
102ADAM10AD10 | AD18 | CD156c | CDw156 | HsT18717 | MADM | RAK | kuzADAM metallopeptidase domain 1015q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5604MAP2K1CFC3 | MAPKK1 | MEK1 | MKK1 | PRKMK1mitogen-activated protein kinase kinase 115q22.1-q22.33CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
4091SMAD6AOVD2 | HsT17432 | MADH6 | MADH7SMAD family member 615q22.31CV:PGCnp
DMG:Wockner_2014
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9915ARNT2WEDAS | bHLHe1aryl hydrocarbon receptor nuclear translocator 215q24CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
11214AKAP13AKAP-13 | AKAP-Lbc | ARHGEF13 | BRX | HA-3 | Ht31 | LBC | PRKA13 | PROTO-LB | PROTO-LBC | c-lbc | p47A-kinase anchoring protein 1315q25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7026NR2F2ARP1 | CHTD4 | COUPTFB | COUPTFII | NF-E3 | NR2F1 | SVP40 | TFCOUP2nuclear receptor subfamily 2 group F member 215q26CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
4205MEF2AADCAD1 | RSRFC4 | RSRFC9 | mef2myocyte enhancer factor 2A15q26CV:PGCnp
PMID:cooccur
641BLMBS | RECQ2 | RECQL2 | RECQL3Bloom syndrome RecQ like helicase15q26.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
22856CHSY1CHSY | CSS1 | ChSy-1 | TPBSchondroitin sulfate synthase 115q26.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
4363ABCC1ABC29 | ABCC | GS-X | MRP | MRP1ATP binding cassette subfamily C member 116p13.1CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
89927C16orf45-chromosome 16 open reading frame 4516p13.11CNV:YES
CV:PGCnp
GSMA_IIE
23274CLEC16AGop-1 | KIAA0350C-type lectin domain family 16 member A16p13.13CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
115ADCY9AC9 | ACIXadenylate cyclase 916p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
INTRACELLULAR SIGNAL TRANSDUCTION
1387CREBBPCBP | KAT3A | RSTSCREB binding protein16p13.3CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
7874USP7HAUSP | TEF1ubiquitin specific peptidase 7 (herpes virus-associated)16p13.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
Ascano FMRP targets
79068FTOALKBH9 | BMIQ14 | GDFDfat mass and obesity associated16q12.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
80205CHD9AD013 | CHD-9 | CReMM | KISH2 | PRIC320chromodomain helicase DNA binding protein 916q12.2CV:PGCnp
DMG:Jaffe_2016
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
23035PHLPP2PHLPPL | PPM3BPH domain and leucine rich repeat protein phosphatase 216q22.2CV:PGCnp
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
463ZFHX3ATBF1 | ATBT | ZNF927zinc finger homeobox 316q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
11216AKAP10AKAP-10 | D-AKAP-2 | D-AKAP2 | PRKA10A-kinase anchoring protein 1017p11.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7326UBE2G1E217K | UBC7 | UBE2Gubiquitin conjugating enzyme E2 G117p13.2CV:PGCnp
23140ZZEF1ZZZ4zinc finger ZZ-type and EF-hand domain containing 117p13.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
4335MNTMAD6 | MXD6 | ROX | bHLHd3MAX network transcriptional repressor17p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
5048PAFAH1B1LIS1 | LIS2 | MDCR | MDS | PAFAHplatelet activating factor acetylhydrolase 1b regulatory subunit 117p13.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
23512SUZ12CHET9 | JJAZ1SUZ12 polycomb repressive complex 2 subunit17q11.2CV:PGCnp
DMG:Nishioka_2013
Chromatin Remodeling Genes
5469MED1CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2mediator complex subunit 117q12CV:PGCnp
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
9020MAP3K14FTDCR1B | HS | HSNIK | NIKmitogen-activated protein kinase kinase kinase 1417q21CV:PGCnp
Network
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
23131GPATCH8GPATC8 | KIAA0553G-patch domain containing 817q21.31CV:PGCnp
996CDC27ANAPC3 | APC3 | CDC27Hs | D0S1430E | D17S978E | H-NUC | HNUC | NUC2cell division cycle 2717q21.32CV:PGCnp
3212HOXB2HOX2 | HOX2H | Hox-2.8 | K8homeobox B217q21.32CV:PGCnp
DMG:Wockner_2014
51096UTP18CGI-48 | WDR50UTP18, small subunit processome component17q21.33CV:PGCnp
DMG:Wockner_2014
9043SPAG9CT89 | HLC-6 | HLC4 | HLC6 | JIP-4 | JIP4 | JLP | PHET | PIG6sperm associated antigen 917q21.33CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
7716VEZF1DB1 | ZNF161vascular endothelial zinc finger 117q22CV:PGCnp
DMG:Jaffe_2016
5889RAD51CBROVCA3 | FANCO | R51H3 | RAD51L2RAD51 paralog C17q22CV:PGCnp
DMG:Wockner_2014
64750SMURF2-SMAD specific E3 ubiquitin protein ligase 217q22-q23CV:PGCnp
DMG:Jaffe_2016
11011TLK2HsHPK | PKU-ALPHAtousled like kinase 217q23CV:PGCnp
DNM:Gulsuner_2013
Network
4591TRIM37MUL | POB1 | TEF3tripartite motif containing 3717q23.2CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10513APPBP2APP-BP2 | HS.84084 | PAT1amyloid beta precursor protein binding protein 217q23.2CV:PGCnp
DMG:Jaffe_2016
9969MED13ARC250 | DRIP250 | HSPC221 | THRAP1 | TRAP240mediator complex subunit 1317q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
CompositeSet
Darnell FMRP targets
11325DDX42DDX42P | RHELP | RNAHP | SF3B8 | SF3b125DEAD-box helicase 4217q23.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
5578PRKCAAAG6 | PKC-alpha | PKCA | PRKACAprotein kinase C alpha17q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
6662SOX9CMD1 | CMPD1 | SRA1 | SRXX2 | SRXY10SRY-box 917q24.3CV:PGCnp
PMID:cooccur
3607FOXK2ILF | ILF-1 | ILF1forkhead box K217q25CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9267CYTH1B2-1 | CYTOHESIN-1 | D17S811E | PSCD1 | SEC7cytohesin 117q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
10801SEPT9AF17q25 | MSF | MSF1 | NAPB | PNUTL4 | SINT1 | SeptD1septin 917q25CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6397SEC14L1PRELID4A | SEC14LSEC14 like lipid binding 117q25.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:vanEijk_2014
Expression
CompositeSet
Darnell FMRP targets
5797PTPRMPTPRL1 | R-PTP-MU | RPTPM | RPTPU | hR-PTPuprotein tyrosine phosphatase, receptor type M18p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
Potential synaptic genes
11031RAB31Rab22BRAB31, member RAS oncogene family18p11.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression
INTRACELLULAR TRAFFICKING
7050TGIF1HPE4 | TGIFTGFB induced factor homeobox 118p11.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
23347SMCHD1-structural maintenance of chromosomes flexible hinge domain containing 118p11.32CV:PGCnp
6093ROCK1P160ROCK | ROCK-IRho associated coiled-coil containing protein kinase 118q11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
1000CDH2CD325 | CDHN | CDw325 | NCADcadherin 218q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Ascano FMRP targets
Potential synaptic genes
5289PIK3C3VPS34 | Vps34 | hVps34phosphatidylinositol 3-kinase catalytic subunit type 318q12.3Association
CV:PGCnp
GR_WM
PMID:cooccur
4200ME2ODS1malic enzyme 2, NAD(+)-dependent, mitochondrial18q21CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
8932MBD2DMTase | NY-CO-41methyl-CpG binding domain protein 218q21CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
10892MALT1IMD12 | MLT | MLT1 | PCASP1MALT1 paracaspase18q21CV:PGCnp
DMG:Jaffe_2016
4089SMAD4DPC4 | JIP | MADH4 | MYHRSSMAD family member 418q21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
4092SMAD7CRCS3 | MADH7 | MADH8SMAD family member 718q21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9811CTIFGm672 | KIAA0427CBP80/20-dependent translation initiation factor18q21.1CV:GWASdb
CV:PGCnp
5055SERPINB2HsT1201 | PAI | PAI-2 | PAI2 | PLANH2serpin peptidase inhibitor, clade B (ovalbumin), member 218q21.3DMG:Wockner_2014
GO_Annotation
5205ATP8B1ATPIC | BRIC | FIC1 | ICP1 | PFIC | PFIC1ATPase phospholipid transporting 8B118q21.31CV:PGCnp
CV:PheWAS
23335WDR7TRAGWD repeat domain 718q21.31CV:PGCnp
CV:PheWAS
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4650MYO9BCELIAC4 | MYR5myosin IXB19p13.1Association
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
Ascano FMRP targets
3949LDLRFH | FHC | LDLCQ2low density lipoprotein receptor19p13.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
5329PLAURCD87 | U-PAR | UPAR | URKRplasminogen activator, urokinase receptor19q13CV:PGCnp
PMID:cooccur
9710KIAA0355-KIAA035519q13.11CV:PGCnp
DMG:Montano_2016
23211ZC3H4C19orf7zinc finger CCCH-type containing 419q13.32CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
51592TRIM33ECTO | PTC7 | RFG7 | TF1G | TIF1G | TIF1GAMMA | TIFGAMMAtripartite motif containing 331p13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
5906RAP1AC21KG | G-22K | KREV-1 | KREV1 | RAP1 | SMGP21RAP1A, member of RAS oncogene family1p13.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6814STXBP3MUNC18-3 | MUNC18C | PSP | UNC-18Csyntaxin binding protein 31p13.3DMG:Jaffe_2016CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
29957SLC25A24APC1 | SCAMC-1solute carrier family 25 member 241p13.3CV:PGCnp
23443SLC35A3AMRSsolute carrier family 35 member A31p21CV:PGCnp
DMG:Wockner_2014
1806DPYDDHP | DHPDHASE | DPDdihydropyrimidine dehydrogenase1p22CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
LK:YES
PMID:cooccur
CompositeSet
2152F3CD142 | TF | TFAcoagulation factor III, tissue factor1p22-p21CV:PGCnp
PMID:cooccur
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
7813EVI5EVI-5 | NB4Secotropic viral integration site 51p22.1CV:GWASdb
CV:PGCnp
8412BCAR3NSP2 | SH2D3Bbreast cancer anti-estrogen resistance 31p22.1CV:PGCnp
DNM:Fromer_2014
5586PKN2PAK2 | PRK2 | PRKCL2 | PRO2042 | Pak-2 | STK7protein kinase N21p22.2CV:PGCnp
DMG:Nishioka_2013
26009ZZZ3ATAC1zinc finger ZZ-type containing 31p31.1CV:PGCnp
GSMA_IIA
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
5567PRKACBPKA C-beta | PKACBprotein kinase cAMP-activated catalytic subunit beta1p31.1CV:PGCnp
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4919ROR1NTRKR1 | dJ537F10.1receptor tyrosine kinase-like orphan receptor 11p31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
4802NFYCCBF-C | CBFC | H1TF2A | HAP5 | HSM | NF-YCnuclear transcription factor Y subunit gamma1p32CV:GWASdb
CV:PGCnp
Expression
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
23499MACF1ABP620 | ACF7 | MACF | OFC4microtubule-actin crosslinking factor 11p32-p31CV:GWASdb
CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9202ZMYM4CDIR | MYM | ZNF198L3 | ZNF262zinc finger MYM-type containing 41p32-p34CV:PGCnp
CV:PheWAS
23318ZCCHC11PAPD3 | TUT4zinc finger CCHC-type containing 111p32.3CV:PGCnp
DMG:Jaffe_2016
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
22887FOXJ3-forkhead box J31p34.2CV:PGCnp
DMG:Jaffe_2016
23013SPENHIAA0929 | MINT | RBM15C | SHARPspen family transcriptional repressor1p36CV:PGCnp
DMG:Nishioka_2013
CompositeSet
Darnell FMRP targets
2048EPHB2CAPB | DRT | EK5 | EPHT3 | ERK | Hek5 | PCBC | Tyro5EPH receptor B21p36.1-p35CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Potential synaptic genes
8672EIF4G3eIF-4G 3 | eIF4G 3 | eIF4GIIeukaryotic translation initiation factor 4 gamma 31p36.12CV:GWAScat
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
27245AHDC1MRD25AT-hook DNA binding motif containing 11p36.13CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3399ID3HEIR-1 | bHLHb25inhibitor of DNA binding 3, HLH protein1p36.13-p36.12CV:PGCnp
PMID:cooccur
23254KAZNKAZkazrin, periplakin interacting protein1p36.21CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
9869SETDB1ESET | H3-K9-HMTase4 | KG1T | KMT1E | TDRD21SET domain bifurcated 11q21CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
8394PIP5K1A-phosphatidylinositol-4-phosphate 5-kinase, type I, alpha1q21.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
GSMA_IIA
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
261726TIPRLTIP | TIP41TOR signaling pathway regulator1q23.2CV:PGCnp
DMG:Jaffe_2016
4921DDR2MIG20a | NTRKR3 | TKT | TYRO10discoidin domain receptor tyrosine kinase 21q23.3CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
27252KLHL20KHLHX | KLEIP | KLHLXkelch like family member 201q25.1CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9857CEP350CAP350 | GM133centrosomal protein 350kDa1q25.2CV:PGCnp
DMG:Jaffe_2016
140609NEK7-NIMA related kinase 71q31.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
23380SRGAP2ARHGAP34 | FNBP2 | SRGAP2A | SRGAP3SLIT-ROBO Rho GTPase activating protein 21q32.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
493ATP2B4ATP2B2 | MXRA1 | PMCA4 | PMCA4b | PMCA4xATPase plasma membrane Ca2+ transporting 41q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Awadalla_2010
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
5525PPP2R5AB56A | PR61Aprotein phosphatase 2 regulatory subunit B', alpha1q32.2-q32.3CV:PGCnp
DMG:Wockner_2014
4931NVLNVL2nuclear VCP-like1q42.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
64746ACBD3GCP60 | GOCAP1 | GOLPH1 | PAP7acyl-CoA binding domain containing 31q42.12CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
4548MTRHMAG | MS | cblG5-methyltetrahydrofolate-homocysteine methyltransferase1q43Association
CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
6000RGS7-regulator of G-protein signaling 71q43|1q23.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
25909AHCTF1ELYS | MST108 | MSTP108 | TMBS62AT-hook containing transcription factor 11q44CV:PGCnp
54453RIN2MACS | RASSF4Ras and Rab interactor 220p11.22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
5332PLCB4ARCND2 | PI-PLCphospholipase C beta 420p12CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
8455ATRNDPPT-L | MGCAattractin20p13CV:PGCnp
PMID:cooccur
5786PTPRAHEPTP | HLPR | HPTPA | HPTPalpha | LRP | PTPA | PTPRL2 | R-PTP-alpha | RPTPAprotein tyrosine phosphatase, receptor type A20p13CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
TYROSINE KINASE SIGNALING
171023ASXL1BOPS | MDSadditional sex combs like 1, transcriptional regulator20q11CV:PGCnp
DNM:Fromer_2014
CompositeSet
Chromatin Remodeling Genes
83737ITCHADMFD | AIF4 | AIP4 | NAPP1itchy E3 ubiquitin protein ligase20q11.22CV:PGCnp
PMID:cooccur
23051ZHX3TIX1zinc fingers and homeoboxes 320q12CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
1434CSE1LCAS | CSE1 | XPO2CSE1 chromosome segregation 1-like (yeast)20q13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
5770PTPN1PTP1Bprotein tyrosine phosphatase, non-receptor type 120q13.1-q13.2CV:PGCnp
Network
PMID:cooccur
23613ZMYND8PRKCBP1 | PRO2893 | RACK7zinc finger MYND-type containing 820q13.12CV:PGCnp
Network
23394ADNPADNP1 | HVDAS | MRD28activity-dependent neuroprotector homeobox20q13.13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
6874TAF4TAF2C | TAF2C1 | TAF4A | TAFII130 | TAFII135TATA-box binding protein associated factor 420q13.33CV:PGCnp
8204NRIP1RIP140nuclear receptor interacting protein 121q11.2CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
351APPAAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2amyloid beta precursor protein21q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6453ITSN1ITSN | SH3D1A | SH3P17intersectin 121q22.1-q22.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6651SONBASS1 | C21orf50 | DBP-5 | NREBP | SON3SON DNA binding protein21q22.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
26046LTN1C21orf10 | C21orf98 | RNF160 | ZNF294listerin E3 ubiquitin protein ligase 121q22.11CV:GWASdb
CV:PGCnp
7074TIAM1-T-cell lymphoma invasion and metastasis 121q22.11CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1859DYRK1ADYRK | DYRK1 | HP86 | MNB | MNBH | MRD7dual specificity tyrosine phosphorylation regulated kinase 1A21q22.13CV:PGCnp
GO_Annotation
9980DOPEY221orf5 | C21orf5dopey family member 221q22.2CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
5116PCNTKEN | MOPD2 | PCN | PCNT2 | PCNTB | PCTN2 | SCKL4pericentrin21q22.3CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Ascano FMRP targets
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
25966C2CD2C21orf25 | C21orf258 | TMEM24LC2 calcium-dependent domain containing 221q22.3CV:PGCnp
57553MICAL3MICAL-3microtubule associated monooxygenase, calponin and LIM domain containing 322q11.21CV:PGCnp
DMG:Wockner_2014
GSMA_I
7290HIRADGCR1 | TUP1 | TUPLE1histone cell cycle regulator22q11.21CNV:YES
CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
23331TTC28TPRBKtetratricopeptide repeat domain 2822q12.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
57591MKL1BSAC | MAL | MRTF-Amegakaryoblastic leukemia (translocation) 122q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
10521DDX17P72 | RH70DEAD-box helicase 1722q13.1CV:PGCnp
DMG:Nishioka_2013
3625INHBB-inhibin beta B2cen-q13CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
55818KDM3AJHDM2A | JHMD2A | JMJD1 | JMJD1A | TSGAlysine demethylase 3A2p11.2CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
Chromatin Remodeling Genes
27332ZNF638NP220 | ZFML | Zfp638zinc finger protein 6382p13.1CV:PGCnp
9736USP34-ubiquitin specific peptidase 342p15CV:PGCnp
Expression
CompositeSet
Darnell FMRP targets
5534PPP3R1CALNB1 | CNB | CNB1protein phosphatase 3 regulatory subunit B, alpha2p15CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Potential synaptic genes
23301EHBP1HPC12 | NACSINEH domain binding protein 12p15CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Ascano FMRP targets
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
4528MTIF2-mitochondrial translational initiation factor 22p16.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
23198PSME4PA200proteasome activator subunit 42p16.2CV:PGCnp
51232CRIM1CRIM-1 | S52cysteine rich transmembrane BMP regulator 1 (chordin-like)2p21CV:PGCnp
GO_Annotation
10128LRPPRCCLONE-23970 | GP130 | LRP130 | LSFCleucine rich pentatricopeptide repeat containing2p21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6432SRSF79G8 | AAG3 | SFRS7serine/arginine-rich splicing factor 72p22.1CV:PGCnp
678ZFP36L2BRF2 | ERF-2 | ERF2 | RNF162C | TIS11DZFP36 ring finger protein-like 22p22.3-p21CV:PGCnp
DMG:Montano_2016
50618ITSN2PRO2015 | SH3D1B | SH3P18 | SWA | SWAPintersectin 22p23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
9475ROCK2ROCK-IIRho associated coiled-coil containing protein kinase 22p24CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
51594NBASILFS2 | NAG | SOPHneuroblastoma amplified sequence2p24CV:PGCnpAscano FMRP targets
57498KIDINS220ARMSkinase D-interacting substrate 220kDa2p24CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
54454ATAD2B-ATPase family, AAA domain containing 2B2p24.1-p23.3CV:PGCnp
6868ADAM17ADAM18 | CD156B | CSVP | NISBD | NISBD1 | TACEADAM metallopeptidase domain 172p25CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
3241HPCAL1BDR1 | HLP2 | VILIP-3hippocalcin like 12p25.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
129642MBOAT2LPCAT4 | OACT2membrane bound O-acyltransferase domain containing 22p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
8853ASAP2AMAP2 | CENTB3 | DDEF2 | PAG3 | PAP | Pap-alpha | SHAG1ArfGAP with SH3 domain, ankyrin repeat and PH domain 22p25|2p24CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
23505TMEM131CC28 | PRO1048 | RW1 | YR-23transmembrane protein 1312q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
5903RANBP2ADANE | ANE1 | IIAE3 | NUP358 | TRP1 | TRP2RAN binding protein 22q12.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Network
Ascano FMRP targets
5775PTPN4MEG | PTPMEG | PTPMEG1protein tyrosine phosphatase, non-receptor type 42q14.2CV:PGCnp
GSMA_I
GSMA_IIA
23332CLASP1MAST1cytoplasmic linker associated protein 12q14.2-q14.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23518R3HDM1R3HDMR3H domain containing 12q21.3DMG:Nishioka_2013
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
9839ZEB2HSPC082 | SIP-1 | SIP1 | SMADIP1 | ZFHX1Bzinc finger E-box binding homeobox 22q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
90ACVR1ACTRI | ACVR1A | ACVRLK2 | ALK2 | FOP | SKR1 | TSRIactivin A receptor type 12q23-q24CV:PGCnp
GSMA_IIA
PMID:cooccur
3800KIF5CCDCBM2 | KINN | NKHC | NKHC-2 | NKHC2kinesin family member 5C2q23.1CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
55183RIF1-replication timing regulatory factor 12q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
8604SLC25A12AGC1 | ARALARsolute carrier family 25 member 122q24CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
8502PKP4p0071plakophilin 42q24.1CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10010TANKI-TRAF | ITRAF | TRAF2TRAF family member associated NFKB activator2q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
Network
PMID:cooccur
64844MARCH7AXO | AXOT | MARCH-VII | RNF177membrane associated ring-CH-type finger 72q24.2CV:PGCnp
GSMA_IIA
5937RBMS1C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1RNA binding motif, single stranded interacting protein 12q24.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
29994BAZ2BWALp4bromodomain adjacent to zinc finger domain 2B2q24.2CV:PGCnp
GSMA_IIA
253782CERS6CERS5 | LASS6ceramide synthase 62q24.3CV:PGCnp
GSMA_IIA
27347STK39DCHT | PASK | SPAKserine/threonine kinase 392q24.3CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
10651MTX2-metaxin 22q31.1CV:PGCnp
GO_Annotation
G2Cdb.human_mitochondria
9874TLK1PKU-betatousled like kinase 12q31.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
57405SPC25AD024 | SPBC25 | hSpc25SPC25, NDC80 kinetochore complex component2q31.1CV:GWASdb
CV:PGCnp
GSMA_IIA
5378PMS1HNPCC3 | MLH2 | PMSL1 | hPMS1PMS1 homolog 1, mismatch repair system component2q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8520HAT1KAT1histone acetyltransferase 12q31.2-q33.1CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
1386ATF2CRE-BP1 | CREB-2 | CREB2 | HB16 | TREB7activating transcription factor 22q32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10787NCKAP1HEM2 | NAP1 | NAP125 | p125Nap1NCK associated protein 12q32CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8609KLF7UKLFKruppel-like factor 7 (ubiquitous)2q32CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
91752ZNF804AC2orf10zinc finger protein 804A2q32.1Core
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Network
PMID:cooccur
23314SATB2GLSSSATB homeobox 22q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
841CASP8ALPS2B | CAP4 | Casp-8 | FLICE | MACH | MCH5caspase 82q33-q34CV:GWASdb
CV:PGCnp
25843MOB42C4D | CGI-95 | MOB1 | MOB3 | MOBKL3 | PHOCN | PREI3MOB family member 4, phocein2q33.1CV:PGCnp
Expression
1385CREB1CREB | CREB-1cAMP responsive element binding protein 12q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
2181ACSL3ACS3 | FACL3 | PRO2194acyl-CoA synthetase long-chain family member 32q34-q35CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
CELL METABOLISM
CompositeSet
580BARD1-BRCA1 associated RING domain 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
3667IRS1HIRS-1insulin receptor substrate 12q36CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
2043EPHA4HEK8 | SEK | TYRO1EPH receptor A42q36.1CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
3267AGFG1HRB | RAB | RIPArfGAP with FG repeats 12q36.3CV:PGCnp
9320TRIP12TRIP-12 | ULFthyroid hormone receptor interactor 122q36.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
116987AGAP1AGAP-1 | CENTG2 | GGAP1 | cnt-g2ArfGAP with GTPase domain, ankyrin repeat and PH domain 12q37CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
26058GIGYF2GYF2 | PARK11 | PERQ2 | PERQ3 | TNRC15GRB10 interacting GYF protein 22q37.1CV:GWAScat
CV:PGC128
CV:PGCnp
Expression
LK:YES
9759HDAC4AHO3 | BDMR | HA6116 | HD4 | HDAC-4 | HDAC-A | HDACAhistone deacetylase 42q37.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
9208LRRFIP1FLAP-1 | FLAP1 | FLIIAP1 | GCF-2 | GCF2 | HUFI-1 | TRIPleucine rich repeat (in FLII) interacting protein 12q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
2632GBE1APBD | GBE | GSD4glucan (1,4-alpha-), branching enzyme 13p12.3CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
23429RYBPAAP1 | APAP-1 | DEDAF | YEAF1RING1 and YY1 binding protein3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
4286MITFCMM8 | MI | WS2 | WS2A | bHLHe32microphthalmia-associated transcription factor3p13CV:PGCnp
PMID:cooccur
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
2317FLNBABP-278 | ABP-280 | AOI | FH1 | FLN-B | FLN1L | LRS1 | SCT | TABP | TAPfilamin B3p14.3Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
23272FAM208AC3orf63 | RAP140 | se89-1family with sequence similarity 208 member A3p14.3CV:PGCnp
7474WNT5AhWNT5Awingless-type MMTV integration site family member 5A3p21-p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
6787NEK4NRK2 | STK2 | pp12301NIMA related kinase 43p21.1CV:PGCnp
LK:YES
PMID:cooccur
51460SFMBT1RU1 | SFMBT | hSFMBTScm-like with four mbt domains 13p21.1CV:PGCnp
LK:YES
23395LARS2LEURS | PRLTS4 | mtLeuRSleucyl-tRNA synthetase 2, mitochondrial3p21.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10180RBM63G2 | DEF-3 | DEF3 | HLC-11 | NY-LU-12 | g16RNA binding motif protein 63p21.3CV:PGCnp
9497SLC4A7NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6solute carrier family 4 member 73p22CV:PGCnp
GO_Annotation
GSMA_I
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
2803GOLGA4CRPF46 | GCP2 | GOLG | MU-RMS-40.18 | p230golgin A43p22-p21.3CV:PGCnp
GSMA_I
22906TRAK1MILT1 | OIP106trafficking protein, kinesin binding 13p22.1CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
9943OXSR1OSR1oxidative stress responsive 13p22.2CV:PGCnp
GSMA_I
PMID:cooccur
23122CLASP2-cytoplasmic linker associated protein 23p22.3CV:PGCnp
GSMA_I
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
23180RFTN1MIG2 | PIB10 | PIG9 | RAFTLINraftlin, lipid raft linker 13p24.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
Ascano FMRP targets
8553BHLHE40BHLHB2 | DEC1 | HLHB2 | SHARP-2 | STRA13 | Stra14basic helix-loop-helix family member e403p26CV:PGCnp
PMID:cooccur
3708ITPR1ACV | CLA4 | INSP3R1 | IP3R | IP3R1 | PPP1R94 | SCA15 | SCA16 | SCA29inositol 1,4,5-trisphosphate receptor type 13p26.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
131544CRYBG3DKFZp667G2110 | vlAKAPcrystallin beta-gamma domain containing 33q11.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
CompositeSet
1295COL8A1C3orf7collagen type VIII alpha 13q12.3GSMA_IIA
GSMA_IIE
PMID:cooccur
56987BBXARTC1 | HBP2 | HSPC339 | MDS001bobby sox homolog (Drosophila)3q13.1CV:GWASdb
CV:PGCnp
CV:PheWAS
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
868CBLBCbl-b | Nbla00127 | RNF56Cbl proto-oncogene B, E3 ubiquitin protein ligase3q13.11CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
26137ZBTB20DPZF | HOF | ODA-8S | PRIMS | ZNF288zinc finger and BTB domain containing 203q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
2932GSK3B-glycogen synthase kinase 3 beta3q13.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7707ZNF148BERF-1 | BFCOL1 | HT-BETA | ZBP-89 | ZFP148 | pHZ-52zinc finger protein 1483q21CV:PGCnp
Expression
4690NCK1NCK | NCKalpha | nck-1NCK adaptor protein 13q21CV:PGCnp
GO_Annotation
Network
57493HEG1HEG | MST112 | MSTP112heart development protein with EGF like domains 13q21.2CV:PGCnp
11343MGLLHU-K5 | HUK5 | MAGL | MGLmonoglyceride lipase3q21.3CV:PGCnp
PMID:cooccur
CANABINOID
CELL METABOLISM
5523PPP2R3APPP2R3 | PR130 | PR72protein phosphatase 2 regulatory subunit B'', alpha3q22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
27032ATP2C1ATP2C1A | BCPM | HHD | PMR1 | SPCA1 | hSPCA1ATPase secretory pathway Ca2+ transporting 13q22.1CV:PGCnp
DMG:vanEijk_2014
30849PIK3R4VPS15 | p150phosphoinositide-3-kinase regulatory subunit 43q22.1CV:PGCnpAscano FMRP targets
10274STAG1SA1 | SCC3Astromal antigen 13q22.3CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Xu_2012
CompositeSet
545ATRFCTCS | FRP1 | MEC1 | SCKL | SCKL1ATR serine/threonine kinase3q23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
25937WWTR1TAZWW domain containing transcription regulator 13q23-q24CV:PGCnp
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
4154MBNL1EXP | MBNLmuscleblind like splicing regulator 13q25CV:PGCnp
GO_Annotation
PMID:cooccur
5806PTX3TNFAIP5 | TSG-14pentraxin 33q25PMID:cooccur
29970SCHIP1SCHIP-1schwannomin interacting protein 13q25.32-q25.33CV:PGCnp
DMG:Wockner_2014
2122MECOMAML1-EVI-1 | EVI1 | MDS1 | MDS1-EVI1 | PRDM3 | RUSAT2MDS1 and EVI1 complex locus3q26.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
23200ATP11BATPIF | ATPIRATPase phospholipid transporting 11B (putative)3q27CV:PGCnp
DMG:Jaffe_2016
8087FXR1FXR1PFMR1 autosomal homolog 13q28CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
3556IL1RAPC3orf13 | IL-1RAcP | IL1R3interleukin 1 receptor accessory protein3q28CV:PGCnp
Network
PMID:cooccur
26043UBXN7UBXD7UBX domain protein 73q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
1739DLG1DLGH1 | SAP-97 | SAP97 | dJ1061C18.1.1 | hdlgdiscs large homolog 1, scribble cell polarity complex component3q29CNV:YES
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
23527ACAP2CENTB2 | CNT-B2ArfGAP with coiled-coil, ankyrin repeat and PH domains 23q29CV:PGCnp
DMG:Jaffe_2016
4976OPA1MGM1 | NPG | NTG | largeGOPA1, mitochondrial dynamin like GTPase3q29CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
CompositeSet
285527FRYLAF4p12 | KIAA0826 | MOR2FRY like transcription coactivator4p11CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
Ascano FMRP targets
323APBB2FE65L | FE65L1amyloid beta precursor protein binding family B member 24p13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
22998LIMCH1LIMCH1A | LMO7BLIM and calponin homology domains 14p13CV:GWASdb
CV:PGCnp
116984ARAP2CENTD1 | PARXArfGAP with RhoGAP domain, ankyrin repeat and PH domain 24p14CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
23244PDS5APIG54 | SCC-112 | SCC112PDS5 cohesin associated factor A4p14CV:PGCnp
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9353SLIT2SLIL3 | Slit-2slit guidance ligand 24p15.2CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
Ascano FMRP targets
Potential synaptic genes
60312AFAP1AFAP | AFAP-110 | AFAP110actin filament associated protein 14p16CV:PGCnp
DMG:Wockner_2014
8603FAM193AC4orf8 | RES4-22family with sequence similarity 193 member A4p16.3CV:PGCnp
DMG:Wockner_2014
23142DCUN1D4-defective in cullin neddylation 1 domain containing 44q12CV:PGCnp
DMG:Wockner_2014
9575CLOCKKAT13D | bHLHe8clock circadian regulator4q12Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9662CEP135CEP4 | KIAA0635 | MCPH8centrosomal protein 135kDa4q12CV:PGCnp
DMG:Jaffe_2016
26057ANKRD17GTAR | MASK2 | NY-BR-16ankyrin repeat domain 174q13.3CV:PGCnpCompositeSet
Darnell FMRP targets
2250FGF5HBGF-5 | Smag-82 | TCMGLYfibroblast growth factor 54q21CV:PGCnp
GO_Annotation
4299AFF1AF4 | MLLT2 | PBM1AF4/FMR2 family member 14q21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
5783PTPN13FAP-1 | PNP1 | PTP-BAS | PTP-BL | PTP1E | PTPL1 | PTPLE | hPTP1Eprotein tyrosine phosphatase, non-receptor type 134q21.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10611PDLIM5ENH | ENH1 | L9 | LIMPDZ and LIM domain 54q22Association
CV:PGCnp
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
5311PKD2APKD2 | PC2 | PKD4 | Pc-2 | TRPP2polycystin 2, transient receptor potential cation channel4q22.1CV:PGCnp
CV:PheWAS
1977EIF4EAUTS19 | CBP | EIF4E1 | EIF4EL1 | EIF4F | eIF-4Eeukaryotic translation initiation factor 4E4q23CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
10098TSPAN5NET-4 | NET4 | TM4SF9 | TSPAN-5tetraspanin 54q23CV:PGCnp
DMG:Jaffe_2016
4790NFKB1CVID12 | EBP-1 | KBF1 | NF-kB1 | NF-kappa-B | NF-kappaB | NFKB-p105 | NFKB-p50 | NFkappaB | p105 | p50nuclear factor of kappa light polypeptide gene enhancer in B-cells 14q24CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
7323UBE2D3E2(17)KB3 | UBC4/5 | UBCH5Cubiquitin conjugating enzyme E2 D34q24CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
2247FGF2BFGF | FGF-2 | FGFB | HBGF-2fibroblast growth factor 24q26CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
9871SEC24DCLCRP2SEC24 homolog D, COPII coat complex component4q26CV:PGCnp
DMG:Jaffe_2016
84162KIAA1109FSA | TweekKIAA11094q27CV:PGCnp
DNM:Gulsuner_2013
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8467SMARCA5ISWI | SNF2H | WCRF135 | hISWI | hSNF2HSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 54q31.1-q31.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
54726OTUD4DUBA6 | HIN1 | HSHIN1OTU deubiquitinase 44q31.21CV:PGCnp
DMG:Jaffe_2016
23240KIAA0922TMEM131LKIAA09224q31.3CV:GWASdb
CV:PGCnp
Ascano FMRP targets
2743GLRBHKPX2glycine receptor beta4q31.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
23321TRIM2CMT2R | RNF86tripartite motif containing 24q31.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
9693RAPGEF2CNrasGEF | NRAPGEP | PDZ-GEF1 | PDZGEF1 | RA-GEF | RA-GEF-1 | Rap-GEP | nRap GEPRap guanine nucleotide exchange factor 24q32.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
4750NEK1NY-REN-55 | SRPS2 | SRPS2A | SRTD6NIMA related kinase 14q33CV:GWASdb
CV:PGCnp
2195FAT1CDHF7 | CDHR8 | FAT | ME5 | hFat1FAT atypical cadherin 14q35CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10605PAIP1-poly(A) binding protein interacting protein 15p12CV:PGCnp
9180OSMROSMRB | PLCA1oncostatin M receptor5p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
25836NIPBLCDLS | CDLS1 | IDN3 | IDN3-B | Scc2Nipped-B homolog (Drosophila)5p13.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
10409BASP1CAP-23 | CAP23 | NAP-22 | NAP22brain abundant membrane attached signal protein 15p15.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4651MYO10-myosin X5p15.1CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9037SEMA5ASEMAF | semFsemaphorin 5A5p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7204TRIOARHGEF23 | tgattrio Rho guanine nucleotide exchange factor5p15.2CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3796KIF2ACDCBM3 | HK2 | KIF2kinesin heavy chain member 2A5q12-q13Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
4131MAP1BFUTSCH | MAP5 | PPP1R102microtubule associated protein 1B5q13CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
8507ENC1CCL28 | ENC-1 | KLHL35 | KLHL37 | NRPB | PIG10 | TP53I10ectodermal-neural cortex 15q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
5921RASA1CM-AVM | CMAVM | GAP | PKWS | RASA | RASGAP | p120 | p120GAP | p120RASGAPRAS p21 protein activator 15q13.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
9765ZFYVE16PPP1R69zinc finger FYVE-type containing 165q14CV:PGCnp
DMG:Jaffe_2016
9522SCAMP1SCAMP | SCAMP37secretory carrier membrane protein 15q14.1CV:PGCnp
PMID:cooccur
EXOCYTOSIS
8546AP3B1ADTB3 | ADTB3A | HPS | HPS2 | PEadaptor related protein complex 3 beta 1 subunit5q14.1CV:PGCnp
DMG:Jaffe_2016
10184LHFPL2-lipoma HMGIC fusion partner-like 25q14.1CV:PGCnp
DMG:Wockner_2014
9456HOMER1HOMER | HOMER1A | HOMER1B | HOMER1C | SYN47 | Ves-1homer scaffolding protein 15q14.2CV:PGCnp
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
7518XRCC4SSMEDX-ray repair complementing defective repair in Chinese hamster cells 45q14.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
22936ELL2-elongation factor for RNA polymerase II 25q15CV:PGCnp
DMG:Wockner_2014
Expression
1105CHD1-chromodomain helicase DNA binding protein 15q15-q21CV:PGCnp
DMG:Jaffe_2016
1946EFNA5AF1 | EFL5 | EPLG7 | GLC1M | LERK7 | RAGSephrin-A55q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
324APCBTPS2 | DP2 | DP2.5 | DP3 | GS | PPP1R46adenomatous polyposis coli5q21-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
23262PPIP5K2CFAP160 | HISPPD1 | IP7K2 | VIP2diphosphoinositol pentakisphosphate kinase 25q21.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4124MAN2A1AMan II | GOLIM7 | MANA2 | MANIImannosidase alpha class 2A member 15q21.3CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
9867PJA2Neurodap1 | RNF131praja ring finger ubiquitin ligase 25q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
CompositeSet
Darnell FMRP targets
25816TNFAIP8GG2-1 | MDC-3.13 | NDED | SCC-S2 | SCCS2TNF alpha induced protein 85q23.1CV:PGCnp
DMG:Wockner_2014
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
51780KDM3B5qNCA | C5orf7 | JMJD1B | NET22lysine demethylase 3B5q31CV:GWASdb
CV:PGC128
CV:PGCnp
DNM:Guipponi_2014
GSMA_I
Ascano FMRP targets
Chromatin Remodeling Genes
5515PPP2CAPP2Ac | PP2CA | PP2Calpha | RP-Cprotein phosphatase 2 catalytic subunit alpha5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
7322UBE2D2E2(17)KB2 | PUBC1 | UBC4 | UBC4/5 | UBCH4 | UBCH5Bubiquitin conjugating enzyme E2 D25q31.2CV:PGCnp
GSMA_I
2908NR3C1GCCR | GCR | GCRST | GR | GRLnuclear receptor subfamily 3 group C member 15q31.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
1452CSNK1A1CK1 | CK1a | CKIa | HEL-S-77p | HLCDGP1 | PRO2975casein kinase 1 alpha 15q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
9685CLINT1CLINT | ENTH | EPN4 | EPNRclathrin interactor 15q33.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
23286WWC1HBEBP3 | HBEBP36 | KIBRA | MEMRYQTL | PPP1R168WW and C2 domain containing 15q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
6793STK10LOK | PRO2729serine/threonine kinase 105q35.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
23607CD2APCMSCD2-associated protein6p12CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
26036ZNF451COASTER | dJ417I1.1zinc finger protein 4516p12.1CV:PGCnp
DMG:vanEijk_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23304UBR2C6orf133 | bA49A4.1 | dJ242G1.1 | dJ392M17.3ubiquitin protein ligase E3 component n-recognin 26p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
8870IER3DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1immediate early response 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
1432MAPK14CSBP | CSBP1 | CSBP2 | CSPB1 | EXIP | Mxi2 | PRKM14 | PRKM15 | RK | SAPK2A | p38 | p38ALPHAmitogen-activated protein kinase 146p21.3-p21.2CV:PGCnp
GSMA_I
GSMA_IIE
Network
PMID:cooccur
23294ANKS1AANKS1ankyrin repeat and sterile alpha motif domain containing 1A6p21.31CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
Ascano FMRP targets
80742PRR3CAT56proline rich 36p21.33CV:PGCnp
DMG:Wockner_2014
GSMA_I
1871E2F3E2F-3E2F transcription factor 36p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9972NUP153HNUP153 | N153nucleoporin 153kDa6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
6310ATXN1ATX1 | D6S504E | SCA1ataxin 16p23Association
CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
3096HIVEP1CIRIP | CRYBP1 | GAAP | MBP-1 | PRDII-BF1 | Schnurri-1 | ZAS1 | ZNF40 | ZNF40Ahuman immunodeficiency virus type I enhancer binding protein 16p24-p22.3CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_I
CompositeSet
Darnell FMRP targets
3720JARID2JMJjumonji and AT-rich interaction domain containing 26p24-p23Association
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Ascano FMRP targets
Chromatin Remodeling Genes
54898ELOVL2SSC2ELOVL fatty acid elongase 26p24.2CV:PGCnp
GSMA_I
PMID:cooccur
9425CDYLCDYL1chromodomain protein, Y-like6p25.1CV:PGCnp
GSMA_I
10667FARS2COXPD14 | FARS1 | HSPC320 | PheRSphenylalanyl-tRNA synthetase 2, mitochondrial6p25.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
23469PHF3-PHD finger protein 36q12CV:PGCnp
55023PHIPBRWD2 | DCAF14 | WDR11 | ndrppleckstrin homology domain interacting protein6q14CV:PGCnp
DMG:Wockner_2014
25998IBTKBTBD26 | BTKIinhibitor of Bruton tyrosine kinase6q14.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8732RNGTTCAP1A | HCE | HCE1 | hCAPRNA guanylyltransferase and 5'-phosphatase6q16CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10973ASCC3ASC1p200 | HELIC1 | RNAHactivating signal cointegrator 1 complex subunit 36q16CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
23097CDK19CDC2L6 | CDK11 | bA346C16.3cyclin-dependent kinase 196q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2309FOXO3AF6q21 | FKHRL1 | FKHRL1P2 | FOXO2 | FOXO3Aforkhead box O36q21CV:PGCnp
DMG:Wockner_2014
Network
CompositeSet
Darnell FMRP targets
8936WASF1SCAR1 | WAVE | WAVE1WAS protein family member 16q21CV:PGCnp
DEG:Maycox_2009
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5980REV3LPOLZ | REV3REV3 like, DNA directed polymerase zeta catalytic subunit6q21CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
5796PTPRKR-PTP-kappaprotein tyrosine phosphatase, receptor type K6q22.2-q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2697GJA1AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCAgap junction protein alpha 16q22.31CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3097HIVEP2HIV-EP2 | MBP-2 | MIBP1 | SHN2 | ZAS2 | ZNF40Bhuman immunodeficiency virus type I enhancer binding protein 26q23-q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
8504PEX3PBD10A | TRG18peroxisomal biogenesis factor 36q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23328SASH1SH3D6A | dJ323M4 | dJ323M4.1SAM and SH3 domain containing 16q24.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5110PCMT1PIMTprotein-L-isoaspartate (D-aspartate) O-methyltransferase6q25.1CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
10090UST2OSTuronyl 2-sulfotransferase6q25.1CV:GWASdb
CV:PGCnp
22828SCAF8RBM16SR-related CTD associated factor 86q25.1-q25.3CV:PGCnp
DMG:Jaffe_2016
8871SYNJ2INPP5Hsynaptojanin 26q25.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
3482IGF2RCD222 | CI-M6PR | CIMPR | M6P-R | M6P/IGF2R | MPR 300 | MPR1 | MPR300 | MPRIinsulin like growth factor 2 receptor6q26CV:PGCnp
DMG:Montano_2016
PMID:cooccur
Ascano FMRP targets
7058THBS2TSP2thrombospondin 26q27CV:PGCnp
DMG:Wockner_2014
Expression
Potential synaptic genes
6196RPS6KA2HU-2 | MAPKAPK1C | RSK | RSK3 | S6K-alpha | S6K-alpha2 | p90-RSK3 | p90RSK2 | pp90RSK3ribosomal protein S6 kinase A26q27CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
1956EGFRERBB | ERBB1 | HER1 | NISBD2 | PIG61 | mENAepidermal growth factor receptor7p12Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
8621CDK13CDC2L | CDC2L5 | CHED | hCDK13cyclin-dependent kinase 137p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
273AMPHAMPH1amphiphysin7p14-p13CV:PGCnp
GO_Annotation
Network
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
23080AVL9KIAA0241AVL9 cell migration associated7p14.3CV:PGCnp
DMG:Jaffe_2016
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
51678MPP6PALS2 | VAM-1 | VAM1 | p55Tmembrane protein, palmitoylated 67p15CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5898RALARALv-ral simian leukemia viral oncogene homolog A (ras related)7p15-p13CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
9586CREB5CRE-BPA | CREB-5cAMP responsive element binding protein 57p15.1CV:PGCnp
DEG:Zhao_2015
9678PHF14-PHD finger protein 147p21.3CV:PGCnpAscano FMRP targets
8379MAD1L1MAD1 | PIG9 | TP53I9 | TXBP181MAD1 mitotic arrest deficient-like 1 (yeast)7p22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
9031BAZ1BWBSCR10 | WBSCR9 | WSTFbromodomain adjacent to zinc finger domain 1B7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
2770GNAI1GiG protein subunit alpha i17q21CV:PGCnp
Network
PMID:cooccur
CANABINOID
G-PROTEIN RELAY
SEROTONIN
Potential synaptic genes
10142AKAP9AKAP-9 | AKAP350 | AKAP450 | CG-NAP | HYPERION | LQT11 | MU-RMS-40.16A | PPP1R45 | PRKA9 | YOTIAOA-kinase anchoring protein 97q21-q22CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10512SEMA3CSEMAE | SemEsemaphorin 3C7q21-q31CV:PGCnp
DMG:Wockner_2014
8295TRRAPPAF350/400 | PAF400 | STAF40 | TR-AP | Tra1transformation/transcription domain-associated protein7q21.2-q22.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
6733SRPK2SFRSK2SRSF protein kinase 27q22-q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
5001ORC5ORC5L | ORC5P | ORC5T | PPP1R117origin recognition complex subunit 57q22.1CV:PGCnp
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
1523CUX1CASP | CDP | CDP/Cut | CDP1 | COY1 | CUTL1 | CUX | Clox | Cux/CDP | GOLIM6 | Nbla10317 | p100 | p110 | p200 | p75cut like homeobox 17q22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10135NAMPT1110035O14Rik | PBEF | PBEF1 | VF | VISFATINnicotinamide phosphoribosyltransferase7q22.3CV:GWASdb
CV:PGCnp
9732DOCK4-dedicator of cytokinesis 47q31.1CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
858CAV2CAVcaveolin 27q31.1CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
29969MDFICHICMyoD family inhibitor domain containing7q31.1-q31.2CV:PGCnp
PMID:cooccur
4289MKLN1TWA2muskelin 17q32CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5420PODXLGp200 | PC | PCLP | PCLP-1podocalyxin like7q32-q33CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
23008KLHDC10slimkelch domain containing 107q32.2CV:PGCnp
4850CNOT4CLONE243 | NOT4 | NOT4HCCR4-NOT transcription complex subunit 47q33CV:PGCnp
DMG:Nishioka_2013
8454CUL1-cullin 17q36.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
10049DNAJB6DJ4 | DnaJ | HHDJ1 | HSJ-2 | HSJ2 | LGMD1D | LGMD1E | MRJ | MSJ-1DnaJ heat shock protein family (Hsp40) member B67q36.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7994KAT6AMOZ | MRD32 | MYST-3 | MYST3 | RUNXBP2 | ZC2HC6A | ZNF220lysine acetyltransferase 6A8p11CV:PGCnp
DMG:Jaffe_2016
6575SLC20A2GLVR-2 | GLVR2 | IBGC1 | IBGC3 | MLVAR | PIT-2 | PIT2 | RAM1 | Ram-1solute carrier family 20 member 28p11.21CV:GWASdb
CV:PGCnp
PMID:cooccur
11030RBPMSHERMESRNA binding protein with multiple splicing8p12CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
2961GTF2E2FE | TF2E2 | TFIIE-Bgeneral transcription factor IIE subunit 28p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
7486WRNRECQ3 | RECQL2 | RECQL3Werner syndrome RecQ like helicase8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
3084NRG1ARIA | GGF | GGF2 | HGL | HRG | HRG1 | HRGA | MST131 | MSTP131 | NDF | NRG1-IT2 | SMDFneuregulin 18p12Association
Core
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
5520PPP2R2AB55A | B55ALPHA | PR52A | PR55Aprotein phosphatase 2 regulatory subunit B, alpha8p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
Network
23362PSD3EFA6D | EFA6R | HCA67pleckstrin and Sec7 domain containing 38p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10395DLC1ARHGAP7 | HP | STARD12 | p122-RhoGAPDLC1 Rho GTPase activating protein8p22CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9639ARHGEF10GEF10 | SNCVRho guanine nucleotide exchange factor 108p23Association
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
8658TNKSARTD5 | PARP-5a | PARP5A | PARPL | TIN1 | TINF1 | TNKS1 | pART5tankyrase8p23.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
9821RB1CC1ATG17 | CC1 | FIP200 | PPP1R131RB1 inducible coiled-coil 18q11CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
51606ATP6V1HCGI-11 | MSTP042 | NBP1 | SFD | SFDalpha | SFDbeta | VMA13ATPase H+ transporting V1 subunit H8q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8439NSMAFFAN | GRAMD5neutral sphingomyelinase activation associated factor8q12.1CV:PGCnp
DMG:Jaffe_2016
4067LYNJTK8 | p53Lyn | p56LynLYN proto-oncogene, Src family tyrosine kinase8q13CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
9650MTFR1CHPPR | FAM54A2mitochondrial fission regulator 18q13.1CV:PGCnp
DMG:Jaffe_2016
4683NBNAT-V1 | AT-V2 | ATV | NBS | NBS1 | P95nibrin8q21CV:PGCnp
27067STAU239K2 | 39K3staufen double-stranded RNA binding protein 28q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
51366UBR5DD5 | EDD | EDD1 | HYDubiquitin protein ligase E3 component n-recognin 58q22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
157680VPS13BCHS1 | COH1vacuolar protein sorting 13 homolog B (yeast)8q22.2CV:PGCnp
DMG:Jaffe_2016
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
51582AZIN1AZI | AZIA1 | OAZI | OAZIN | ODC1Lantizyme inhibitor 18q22.3CV:PGCnp
DMG:Jaffe_2016
22882ZHX2AFR1 | RAFzinc fingers and homeoboxes 28q24.13CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
23167EFR3A-EFR3 homolog A8q24.22CV:PGCnp
DMG:Jaffe_2016
5747PTK2FADK | FAK | FAK1 | FRNK | PPP1R71 | p125FAK | pp125FAKprotein tyrosine kinase 28q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
6461SHBbA3J10.2Src homology 2 domain containing adaptor protein B9p13.2CV:GWASdb
CV:PGCnp
Ascano FMRP targets
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
10020GNEDMRV | GLCNE | IBM2 | NM | Uae1glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase9p13.3CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
PMID:cooccur
4507MTAPBDMF | DMSFH | DMSMFH | HEL-249 | LGMBF | MSAP | c86fusmethylthioadenosine phosphorylase9p21CV:PGCnp
6595SMARCA2BAF190 | BRM | NCBRS | SNF2 | SNF2L2 | SNF2LA | SWI2 | Sth1p | hBRM | hSNF2aSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 29p22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
7436VLDLRCAMRQ1 | CARMQ1 | CHRMQ1 | VLDLRCHvery low density lipoprotein receptor9p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
4781NFIBCTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3nuclear factor I/B9p24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
23081KDM4CGASC1 | JHDM3C | JMJD2C | TDRD14Clysine demethylase 4C9p24.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
2650GCNT1C2GNT | C2GNT-L | C2GNT1 | G6NT | NACGT2 | NAGCT2glucosaminyl (N-acetyl) transferase 1, core 29q13CV:GWASdb
CV:PGCnp
9414TJP2C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2tight junction protein 29q13-q21CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
23230VPS13ACHAC | CHOREINvacuolar protein sorting 13 homolog A (S. cerevisiae)9q21CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
2776GNAQCMC1 | G-ALPHA-q | GAQ | SWSG protein subunit alpha q9q21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.human_mGluR5
G2Cdb.humanPSP
Potential synaptic genes
23137SMC5SMC5L1structural maintenance of chromosomes 59q21.12CV:PGCnp
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
7088TLE1ESG | ESG1 | GRG1transducin like enhancer of split 19q21.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
1612DAPK1DAPKdeath-associated protein kinase 19q21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DNM:McCarthy_2014
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
549AUH-AU RNA binding protein/enoyl-CoA hydratase9q22.31CV:PGCnp
DMG:Wockner_2014
23424TDRD7CATC4 | PCTAIRE2BP | TRAPtudor domain containing 79q22.33CV:PGCnp
DMG:Wockner_2014
7357UGCGGCS | GLCT1UDP-glucose ceramide glucosyltransferase9q31CV:PGCnp
5887RAD23BHHR23B | HR23B | P58RAD23 homolog B, nucleotide excision repair protein9q31.2CV:PGCnp
DMG:Jaffe_2016
5090PBX3-pre-B-cell leukemia homeobox 39q33.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
23133PHF8JHDM1F | MRXSSD | ZNF422PHD finger protein 8Xp11.22CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
8573CASKCAGH39 | CAMGUK | CMG | FGS4 | LIN2 | MICPCH | MRXSNA | TNRC8calcium/calmodulin-dependent serine protein kinase (MAGUK family)Xp11.4CV:PGCnp
Expression
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
Potential synaptic genes
1756DMDBMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85dystrophinXp21.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
6197RPS6KA3CLS | HU-3 | ISPK-1 | MAPKAPK1B | MRX19 | RSK | RSK2 | S6K-alpha3 | p90-RSK2 | pp90RSK2ribosomal protein S6 kinase A3Xp22.2-p22.1CV:GWAScat
CV:PGC128
CV:PGCnp
Expression
GO_Annotation
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
8473OGTHINCUT-1 | HRNT1 | O-GLCNACO-linked N-acetylglucosamine (GlcNAc) transferaseXq13Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
Potential synaptic genes
546ATRXATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HXalpha thalassemia/mental retardation syndrome X-linkedXq21.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
6594SMARCA1ISWI | NURF140 | SNF2L | SNF2L1 | SNF2LB | SNF2LT | SWI | SWI2 | hSNF2LSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1Xq25CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
4204MECP2AUTSX3 | MRX16 | MRX79 | MRXS13 | MRXSL | PPMX | RS | RTS | RTTmethyl-CpG binding protein 2Xq28CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
PMID:cooccur
Chromatin Remodeling Genes