Gene Page

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
CNTNAP2	AUTS15 \| CASPR2 \| CDFE \| DKFZp781D1846 \| NRXN4	contactin associated protein-like 2	-	HPRD	12421765
CNTNAP4	CASPR4 \| KIAA1763	contactin associated protein-like 4	-	HPRD	12421765
GOLGA4	GCP2 \| GOLG \| MU-RMS-40.18 \| p230	golgi autoantigen, golgin subfamily a, 4	p230 interacts with MACF1.	BIND	15265687
GOLGA4	GCP2 \| GOLG \| MU-RMS-40.18 \| p230	golgi autoantigen, golgin subfamily a, 4	-	HPRD	15265687
NRCAM	KIAA0343 \| MGC138845 \| MGC138846	neuronal cell adhesion molecule	-	HPRD	12421765
NRXN1	DKFZp313P2036 \| FLJ35941 \| Hs.22998 \| KIAA0578	neurexin 1	-	HPRD	12421765
NRXN2	FLJ40892 \| KIAA0921	neurexin 2	-	HPRD	12421765
PLXND1	KIAA0620 \| MGC75353 \| PLEXD1	plexin D1	-	HPRD	12421765
TMCO7	FLJ12688 \| KIAA1746	transmembrane and coiled-coil domains 7	-	HPRD	12421765

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_DN	634	384	All SZGR genes in this pathway
ONKEN_UVEAL_MELANOMA_UP	783	507	All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_LIVE_UP	485	293	All SZGR genes in this pathway
LAIHO_COLORECTAL_CANCER_SERRATED_UP	112	71	All SZGR genes in this pathway
HOEBEKE_LYMPHOID_STEM_CELL_UP	95	64	All SZGR genes in this pathway
MULLIGHAN_MLL_SIGNATURE_2_DN	281	186	All SZGR genes in this pathway
TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_GRANULOCYTE_UP	55	34	All SZGR genes in this pathway
GOZGIT_ESR1_TARGETS_DN	781	465	All SZGR genes in this pathway
ENK_UV_RESPONSE_KERATINOCYTE_DN	485	334	All SZGR genes in this pathway
LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN	800	473	All SZGR genes in this pathway
EBAUER_TARGETS_OF_PAX3_FOXO1_FUSION_UP	207	128	All SZGR genes in this pathway
EBAUER_MYOGENIC_TARGETS_OF_PAX3_FOXO1_FUSION	50	26	All SZGR genes in this pathway
XU_HGF_SIGNALING_NOT_VIA_AKT1_48HR_UP	35	20	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	855	609	All SZGR genes in this pathway
WOOD_EBV_EBNA1_TARGETS_DN	47	33	All SZGR genes in this pathway
DAIRKEE_TERT_TARGETS_DN	124	79	All SZGR genes in this pathway
KIM_MYCN_AMPLIFICATION_TARGETS_UP	92	64	All SZGR genes in this pathway
SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP	479	299	All SZGR genes in this pathway
ROPERO_HDAC2_TARGETS	114	71	All SZGR genes in this pathway
SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	514	330	All SZGR genes in this pathway
GEORGES_CELL_CYCLE_MIR192_TARGETS	62	46	All SZGR genes in this pathway
GEORGES_TARGETS_OF_MIR192_AND_MIR215	893	528	All SZGR genes in this pathway
SHEN_SMARCA2_TARGETS_UP	424	268	All SZGR genes in this pathway
SAKAI_TUMOR_INFILTRATING_MONOCYTES_DN	81	51	All SZGR genes in this pathway
MORI_LARGE_PRE_BII_LYMPHOCYTE_DN	58	39	All SZGR genes in this pathway
MORI_MATURE_B_LYMPHOCYTE_UP	90	62	All SZGR genes in this pathway
YU_MYC_TARGETS_DN	55	38	All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_16HR_DN	86	62	All SZGR genes in this pathway
CUI_TCF21_TARGETS_2_DN	830	547	All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_20HR_DN	101	70	All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_UP	1691	1088	All SZGR genes in this pathway
DOUGLAS_BMI1_TARGETS_UP	566	371	All SZGR genes in this pathway
DURCHDEWALD_SKIN_CARCINOGENESIS_DN	264	168	All SZGR genes in this pathway
ZHENG_BOUND_BY_FOXP3	491	310	All SZGR genes in this pathway
DE_YY1_TARGETS_DN	92	64	All SZGR genes in this pathway
MITSIADES_RESPONSE_TO_APLIDIN_DN	249	165	All SZGR genes in this pathway
BONCI_TARGETS_OF_MIR15A_AND_MIR16_1	91	75	All SZGR genes in this pathway
SWEET_LUNG_CANCER_KRAS_DN	435	289	All SZGR genes in this pathway
ZHANG_TLX_TARGETS_36HR_DN	185	116	All SZGR genes in this pathway
YAGI_AML_WITH_T_8_21_TRANSLOCATION	368	247	All SZGR genes in this pathway
WONG_ADULT_TISSUE_STEM_MODULE	721	492	All SZGR genes in this pathway
DUTERTRE_ESTRADIOL_RESPONSE_6HR_UP	229	149	All SZGR genes in this pathway
LINSLEY_MIR16_TARGETS	206	127	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124.1	126	132	m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	126	132	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	126	132	1A	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-138	943	950	1A,m8	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-142-5p	366	372	1A	hsa-miR-142-5p	CAUAAAGUAGAAAGCACUAC
miR-15/16/195/424/497	640	646	1A	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-186	364	370	1A	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-19	557	564	1A,m8	hsa-miR-19a	UGUGCAAAUCUAUGCAAAACUGA
miR-19	557	564	1A,m8	hsa-miR-19b	UGUGCAAAUCCAUGCAAAACUGA
miR-192/215	254	260	1A	hsa-miR-192	CUGACCUAUGAAUUGACAGCC
miR-192/215	254	260	1A	hsa-miR-215	AUGACCUAUGAAUUGACAGAC
miR-217	1180	1186	1A	hsa-miR-217	UACUGCAUCAGGAACUGAUUGGAU
miR-23	163	169	1A	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	163	169	1A	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-25/32/92/363/367	587	593	1A	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-377	1084	1090	m8	hsa-miR-377	AUCACACAAAGGCAACUUUUGU
miR-379	1129	1135	1A	hsa-miR-379^brain	UGGUAGACUAUGGAACGUA
miR-409-5p	197	203	m8	hsa-miR-409-5p	AGGUUACCCGAGCAACUUUGCA
miR-410	83	89	m8	hsa-miR-410	AAUAUAACACAGAUGGCCUGU
miR-421	1111	1117	1A	hsa-miR-421	GGCCUCAUUAAAUGUUUGUUG
miR-503	640	646	1A	hsa-miR-503	UAGCAGCGGGAACAGUUCUGCAG
miR-544	1115	1121	1A	hsa-miR-544	AUUCUGCAUUUUUAGCAAGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.