Search results: The pahtway p2469 has 893 genes in the original annotation. Currently, there are 528 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
57209ZNF248bA162G10.3zinc finger protein 24810p11.2DMG:Jaffe_2016
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
219771CCNYC10orf9 | CBCP1 | CCNX | CFP1cyclin Y10p11.21CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3799KIF5BHEL-S-61 | KINH | KNS | KNS1 | UKHCkinesin family member 5B10p11.22CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
220213OTUD1DUBA7 | OTDC1OTU deubiquitinase 110p12.2CV:PGCnp
55388MCM10CNA43 | DNA43 | PRO2249minichromosome maintenance 10 replication initiation factor10p13CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10771ZMYND11BRAM1 | BS69 | MRD30zinc finger MYND-type containing 1110p14CV:PGCnp
DNM:Fromer_2014
CompositeSet
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
5979RETCDHF12 | CDHR16 | HSCR1 | MEN2A | MEN2B | MTC1 | PTC | RET-ELE1 | RET51ret proto-oncogene10q11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
7321UBE2D1E2(17)KB1 | SFT | UBC4/5 | UBCH5 | UBCH5Aubiquitin conjugating enzyme E2 D110q21.1CV:PGCnp
PMID:cooccur
219790RTKN2PLEKHK1 | bA531F24.1rhotekin 210q21.2CV:PGCnp
PMID:cooccur
23411SIRT1SIR2 | SIR2L1 | SIR2alphasirtuin 110q21.3CV:PGCnp
GO_Annotation
PMID:cooccur
Chromatin Remodeling Genes
79009DDX50GU2 | GUB | RH-II/GuB | mcdrhDEAD-box helicase 5010q22.1CV:PGCnp
219738C10orf35-chromosome 10 open reading frame 3510q22.1CV:GWASdb
CV:PGCnp
CompositeSet
170384FUT11-fucosyltransferase 11 (alpha (1,3) fucosyltransferase)10q22.2DMG:Jaffe_2016
57089ENTPD7LALP1ectonucleoside triphosphate diphosphohydrolase 710q23-q24CV:PGCnp
DMG:Wockner_2014
3988LIPACESD | LALlipase A, lysosomal acid type10q23.2-q23.3CV:GWASdb
CV:PGCnp
84896ATAD1AFDC1 | FNP001 | THORASEATPase family, AAA domain containing 110q23.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
57559STAMBPL1ALMalpha | AMSH-FP | AMSH-LP | bA399O19.2STAM binding protein like 110q23.31DMG:Jaffe_2016
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
159371SLC35G1C10orf60 | TMEM20solute carrier family 35 member G110q23.33CV:PGCnp
PMID:cooccur
4601MXI1MAD2 | MXD2 | MXI | bHLHc11MAX interactor 1, dimerization protein10q24-q25CV:GWASdb
CV:PGCnp
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
84545MRPL43L43mt | MRP-L43 | bMRP36amitochondrial ribosomal protein L4310q24.31CV:PGCnp
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
119392SFR1C10orf78 | MEI5 | MEIR5 | bA373N18.1SWI5 dependent homologous recombination repair protein 110q25.1CV:GWASdb
CV:PGCnp
5791PTPREHPTPE | PTPE | R-PTP-EPSILONprotein tyrosine phosphatase, receptor type E10q26CV:PGCnp
GSMA_IIA
PMID:cooccur
22841RAB11FIP2Rab11-FIP2 | nRip11RAB11 family interacting protein 2 (class I)10q26.11CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
22876INPP5FMSTP007 | MSTPO47 | SAC2 | hSAC2inositol polyphosphate-5-phosphatase F10q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
50624CUZD1ERG-1 | ERG1 | ITMAP1 | UO-44CUB and zona pellucida like domains 110q26.13CV:GWASdb
DNM:Fromer_2014
GSMA_IIA
CompositeSet
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
26273FBXO3FBA | FBX3F-box protein 311p13CV:PGCnp
DMG:Wockner_2014
81930KIF18AMS-KIF18A | PPP1R99kinesin family member 18A11p14.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
7762ZNF215BAZ-2 | BAZ2 | ZKSCAN11 | ZSCAN43zinc finger protein 21511p15.4CV:PGCnp
50862RNF141ZFP26 | ZNF230ring finger protein 14111p15.4|11p15CV:PGCnp
DMG:Jaffe_2016
10522DEAF1MRD24 | NUDR | SPN | ZMYND5DEAF1, transcription factor11p15.5CV:PGCnp
DMG:Wockner_2014
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
5499PPP1CAPP-1A | PP1A | PP1alpha | PPP1Aprotein phosphatase 1 catalytic subunit alpha11q13DMG:Montano_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Chromatin Remodeling Genes
5017OVOL1HOVO1ovo like zinc finger 111q13CV:PGCnp
DMG:Wockner_2014
254102EHBP1L1-EH domain binding protein 1 like 111q13.1CV:PGCnp
23649POLA2-polymerase (DNA) alpha 2, accessory subunit11q13.1CV:PGCnp
DMG:Jaffe_2016
9846GAB2-GRB2 associated binding protein 211q14.1CV:PGCnp
DMG:Wockner_2014
11098PRSS23SIG13 | SPUVE | ZSIG13protease, serine 2311q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
8322FZD4CD344 | EVR1 | FEVR | FZD4S | Fz-4 | Fz4 | FzE4 | GPCR | hFz4frizzled class receptor 411q14.2CV:PGCnp
DMG:Wockner_2014
23052ENDOD1-endonuclease domain containing 111q21CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
24145PANX1MRS1 | PX1 | UNQ2529pannexin 111q21CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
60496AASDHPPTAASD-PPT | ACPS | CGI-80 | LYS2 | LYS5aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase11q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8065CUL5VACM-1 | VACM1cullin 511q22.3CV:GWASdb
CV:PGCnp
GSMA_I
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
5805PTSPTPS6-pyruvoyltetrahydropterin synthase11q22.3GO_Annotation
GSMA_I
PMID:cooccur
143888KDELC2-KDEL motif containing 211q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Guipponi_2014
GSMA_I
10632ATP5LATP5JGATP synthase, H+ transporting, mitochondrial Fo complex subunit G11q23.3Expression
GSMA_I
4162MCAMCD146 | MUC18melanoma cell adhesion molecule11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
219902TMEM136-transmembrane protein 13611q23.3CV:PGCnp
GSMA_I
84959UBASH3BSTS-1 | STS1 | TULA-2 | TULA2 | p70ubiquitin associated and SH3 domain containing B11q24.1CV:PGCnp
80071CCDC15-coiled-coil domain containing 1511q24.2CV:PGCnp
636BICD1BICDbicaudal D homolog 1 (Drosophila)12p11.2-p11.1CV:GWASdb
CV:PGCnp
PMID:cooccur
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
80824DUSP16MKP-7 | MKP7dual specificity phosphatase 1612p13CV:PGCnp
1389CREBL2-cAMP responsive element binding protein like 212p13CV:PGCnp
DMG:Wockner_2014
50813COPS7ACSN7 | CSN7A | SGN7aCOP9 signalosome subunit 7A12p13.31CV:PGCnp
PMID:cooccur
27345KCNMB4-potassium calcium-activated channel subfamily M regulatory beta subunit 412qCV:PGCnp
GO_Annotation
EXCITABILITY
83956RACGAP1PFKSG42Rac GTPase activating protein 1 pseudogene12q12CV:PGCnp
196527ANO6BDPLT7 | SCTS | TMEM16Fanoctamin 612q12CV:PGCnp
144165PRICKLE1EPM1B | RILPprickle planar cell polarity protein 112q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
9194SLC16A7MCT2solute carrier family 16 member 712q13CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
466ATF1EWS-ATF1 | FUS/ATF-1 | TREB36activating transcription factor 112q13CV:PGCnp
29843SENP1SuPr-2SUMO1/sentrin specific peptidase 112q13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
114882OSBPL8MST120 | MSTP120 | ORP8 | OSBP10oxysterol binding protein like 812q14CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5074PAWRPAR4 | Par-4pro-apoptotic WT1 regulator12q21Association
CV:PGCnp
PMID:cooccur
160335TMTC2IBDBP1transmembrane and tetratricopeptide repeat containing 212q21.31CV:GWASdb
CV:PGCnp
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
283431GAS2L3G2L3growth arrest specific 2 like 312q23.1CV:PGCnp
DMG:Nishioka_2013
121441NEDD1GCP-WD | TUBGCP7neural precursor cell expressed, developmentally down-regulated 112q23.1CV:PGCnp
DMG:Wockner_2014
10970CKAP4CLIMP-63 | ERGIC-63 | p63cytoskeleton-associated protein 412q23.3CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
11108PRDM4PFM1PR domain 412q23.3CV:GWASdb
CV:PGCnp
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
326625MMABATR | CFAP23 | cblB | cobmethylmalonic aciduria (cobalamin deficiency) cblB type12q24CV:PGCnp
DMG:Jaffe_2016
11113CITCRIK | STK21citron rho-interacting serine/threonine kinase12q24CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
84260TCHPTpMstrichoplein keratin filament binding12q24.11CV:PGCnp
DMG:Jaffe_2016
88455ANKRD13AANKRD13 | NY-REN-25ankyrin repeat domain 13A12q24.11CV:PGCnp
Expression
91574C12orf65COXPD7 | SPG55chromosome 12 open reading frame 6512q24.31CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
LK:YES
10186LHFP-lipoma HMGIC fusion partner13q12CV:PGCnp
DMG:Nishioka_2013
283537SLC46A3FKSG16solute carrier family 46 member 313q12.3CV:PGCnp
DMG:Jaffe_2016
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
11215AKAP11AKAP-11 | AKAP220 | PPP1R44 | PRKA11A-kinase anchoring protein 1113q14.11CV:PGCnp
253512SLC25A30KMCP1solute carrier family 25 member 3013q14.13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
1102RCBTB2CHC1L | RLGRCC1 and BTB domain containing protein 213q14.3CV:PGCnp
79866BORAC13orf34bora, aurora kinase A activator13q22.1CV:PGCnp
PMID:cooccur
440145MZT1C13orf37 | MOZART1mitotic spindle organizing protein 113q22.1CV:PGCnp
115207KCTD12C13orf2 | PFET1 | PFETINpotassium channel tetramerization domain containing 1213q22.3CV:PGCnp
PMID:cooccur
EXCITABILITY
CompositeSet
54602NDFIP2N4WBP5ANedd4 family interacting protein 213q31.1CV:PGCnp
DMG:Wockner_2014
10673TNFSF13BBAFF | BLYS | CD257 | DTL | TALL-1 | TALL1 | THANK | TNFSF20 | TNLG7A | ZTNF4tumor necrosis factor superfamily member 13b13q32-q34CV:PGCnp
PMID:cooccur
5611DNAJC3ACPHD | ERdj6 | HP58 | P58 | P58IPK | PRKRIDnaJ heat shock protein family (Hsp40) member C313q32.1CV:PGCnp
160897GPR180ITRG protein-coupled receptor 18013q32.1CV:PGCnp
DMG:Jaffe_2016
85416ZIC5-Zic family member 513q32.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1948EFNB2EPLG5 | HTKL | Htk-L | LERK5ephrin-B213q33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
54841BIVM-basic, immunoglobulin-like variable motif containing13q33.1CV:PGCnp
DMG:Nishioka_2013
6038RNASE4RAB1 | RNS4ribonuclease A family member 414q11CV:GWASdb
CV:PGCnp
GSMA_I
283ANGALS9 | HEL168 | RAA1 | RNASE4 | RNASE5angiogenin, ribonuclease, RNase A family, 514q11.1-q11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
55632G2E3KIAA1333 | PHF7BG2/M-phase specific E3 ubiquitin protein ligase14q12CV:PGCnp
GSMA_I
1073CFL2NEM7cofilin 214q12CV:GWASdb
CV:PGCnp
80821DDHD1PA-PLA1 | PAPLA1 | SPG28DDHD domain containing 114q21CV:PGCnpAscano FMRP targets
3169FOXA1HNF3A | TCF3Aforkhead box A114q21.1CV:PGCnp
DMG:Wockner_2014
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
283554GPR137CTM7SF1L2G protein-coupled receptor 137C14q22.1CV:PGCnp
51199NINSCKL7ninein14q22.1CV:GWASdb
CV:PGCnp
CV:PheWAS
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5494PPM1APP2C-ALPHA | PP2CA | PP2Calphaprotein phosphatase, Mg2+/Mn2+ dependent 1A14q23.1CV:PGCnp
Network
81537SGPP1SPPase1sphingosine-1-phosphate phosphatase 114q23.2CV:PGCnp
PMID:cooccur
55334SLC39A9ZIP-9 | ZIP9solute carrier family 39 member 914q24.1PMID:cooccur
3306HSPA2HSP70-2 | HSP70-3heat shock protein family A (Hsp70) member 214q24.1CV:PGCnp
PMID:cooccur
CompositeSet
10972TMED10P24(DELTA) | S31I125 | S31III125 | TMP21 | Tmp-21-I | p23 | p24d1transmembrane p24 trafficking protein 1014q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
2009EML1ELP79 | EMAP | EMAPL | HuEMAPechinoderm microtubule associated protein like 114q32CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5641LGMNAEP | LGMN1 | PRSC1legumain14q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
90141EFCAB11C14orf143EF-hand calcium binding domain 1114q32.11CV:PGCnp
PMID:cooccur
55775TDP1-tyrosyl-DNA phosphodiesterase 114q32.11CV:PGCnp
DMG:Nishioka_2013
78990OTUB2C14orf137 | OTB2 | OTU2OTU deubiquitinase, ubiquitin aldehyde binding 214q32.12CV:PGCnp
Expression
23405DICER1DCR1 | Dicer | Dicer1e | HERNA | K12H4.8-LIKE | MNG1 | RMSE2dicer 1 ribonuclease III14q32.13CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
55038CDCA4HEPP | SEI-3/HEPPcell division cycle associated 414q32.33DMG:Wockner_2014
123606NIPA1FSP3 | SPG6non imprinted in Prader-Willi/Angelman syndrome 115q11.2CV:PGCnp
PMID:cooccur
8924HERC2D15F37S1 | MRT38 | SHEP1 | jdf2 | p528HECT and RLD domain containing E3 ubiquitin protein ligase 215q13CNV:YES
DEG:Sanders_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
4212MEIS2HsT18361 | MRG1Meis homeobox 215q14CV:PGCnp
PMID:cooccur
56924PAK6PAK5p21 protein (Cdc42/Rac)-activated kinase 615q14CV:GWAScat
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
79968WDR76CDW14WD repeat domain 7615q15.3CV:PGCnp
Expression
2628GATMAGAT | AT | CCDS3glycine amidinotransferase15q21.1DMG:Wockner_2014
2200FBN1ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2fibrillin 115q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
84952CGNL1JACOPcingulin-like 115q21.3CV:PGCnp
GO_Annotation
PMID:cooccur
5873RAB27AGS2 | HsT18676 | RAB27 | RAMRAB27A, member RAS oncogene family15q21.3CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GO_Annotation
54629FAM63B-family with sequence similarity 63 member B15q21.3CV:PGCnp
PMID:cooccur
55329MNS1SPATA40meiosis specific nuclear structural 115q21.3CV:PGCnp
55075UACANUCLINGuveal autoantigen with coiled-coil domains and ankyrin repeats15q22-q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
51762RAB8B-RAB8B, member RAS oncogene family15q22.2CV:PGCnpINTRACELLULAR TRAFFICKING
54832VPS13C-vacuolar protein sorting 13 homolog C (S. cerevisiae)15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
54956PARP16ARTD15 | C15orf30 | pART15poly(ADP-ribose) polymerase family member 1615q22.31CV:PGCnp
DMG:Jaffe_2016
115752DIS3LDIS3L1DIS3 like exosome 3'-5' exoribonuclease15q22.31CV:PGCnp
DMG:Jaffe_2016
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10391CORO2BCLIPINCcoronin 2B15q23CV:PGCnp
DMG:Jaffe_2016
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10021HCN4SSS2hyperpolarization activated cyclic nucleotide gated potassium channel 415q24.1CV:PGCnp
145957NRG4HRG4neuregulin 415q24.2CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
84206MEX3BMEX-3B | RKHD3 | RNF195mex-3 RNA binding family member B15q25.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
28232SLCO3A1OATP-D | OATP3A1 | OATPD | SLC21A11solute carrier organic anion transporter family member 3A115q26CV:GWAScat
CV:PGCnp
PMID:cooccur
641BLMBS | RECQ2 | RECQL2 | RECQL3Bloom syndrome RecQ like helicase15q26.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
55215FANCIKIAA1794Fanconi anemia complementation group I15q26.1CV:PGCnpAscano FMRP targets
4122MAN2A2MANA2Xmannosidase alpha class 2A member 215q26.1CV:PGCnpCompositeSet
Darnell FMRP targets
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
7385UQCRC2MC3DN5 | QCR2 | UQCR2ubiquinol-cytochrome c reductase core protein II16p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
730094C16orf52-chromosome 16 open reading frame 5216p12.2CV:PGCnp
51108METTL9CGI-81 | DREV | DREV1 | PAP1methyltransferase like 916p12.2CV:PGCnp
GSMA_IIE
54820NDE1HOM-TES-87 | LIS4 | MHAC | NDE | NUDE | NUDE1nudE neurodevelopment protein 116p13.11CNV:YES
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
2072ERCC4ERCC11 | FANCQ | RAD1 | XFEPS | XPFexcision repair cross-complementation group 416p13.12CV:PGCnp
GSMA_IIE
57496MKL2MRTF-B | MRTFB | NPD001MKL/myocardin-like 216p13.12CV:PGCnp
DMG:Jaffe_2016
DNM:McCarthy_2014
GO_Annotation
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23322RPGRIP1LCORS3 | FTM | JBTS7 | MKS5 | NPHP8 | PPP1R134RPGRIP1-like16q12.2Core
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
4494MT1FMT1metallothionein 1F16q13CV:PGCnp
PMID:cooccur
4501MT1XMT-1l | MT1metallothionein 1X16q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
64127NOD2ACUG | BLAU | CARD15 | CD | CLR16.3 | IBD1 | NLRC2 | NOD2B | PSORAS1nucleotide binding oligomerization domain containing 216q21CV:PGCnp
DMG:Montano_2016
Expression
GSMA_IIE
PMID:cooccur
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
6553SLC9A5NHE5solute carrier family 9 member A516q22.1CV:PGCnp
55159RFWD3RNF201ring finger and WD repeat domain 316q23.1CV:PGCnp
81631MAP1LC3BATG8F | LC3B | MAP1A/1BLC3 | MAP1LC3B-amicrotubule associated protein 1 light chain 3 beta16q24.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
79791FBXO31FBX14 | FBXO14 | Fbx31 | MRT45 | pp2386F-box protein 3116q24.2CV:PGCnp
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
197322ACSF3-acyl-CoA synthetase family member 316q24.3CV:PGCnp
56953NT5MdNT-2 | dNT2 | mdN5',3'-nucleotidase, mitochondrial17p11.2CV:PGCnp
DMG:Jaffe_2016
359845FAM101BCFM1family with sequence similarity 101 member B17p13CV:GWASdb
CV:PGCnp
79003MIS122510025F08Rik | KNTC2AP | MTW1 | hMis12MIS12 kinetochore complex component17p13.2CV:PGCnp
DMG:Jaffe_2016
7442TRPV1VR1transient receptor potential cation channel subfamily V member 117p13.2CV:PGCnp
DEG:Zhao_2015
Network
PMID:cooccur
1398CRKCRKII | p38v-crk avian sarcoma virus CT10 oncogene homolog17p13.3CV:PGCnp
Network
5048PAFAH1B1LIS1 | LIS2 | MDCR | MDS | PAFAHplatelet activating factor acetylhydrolase 1b regulatory subunit 117p13.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
51701NLK-nemo-like kinase17q11.2CV:PGCnp
79915ATAD5C17orf41 | ELG1 | FRAG1ATPase family, AAA domain containing 517q11.2CV:PGCnp
Expression
51379CRLF3CREME-9 | CREME9 | CRLM9 | CYTOR4 | FRWS | p48.2cytokine receptor-like factor 317q11.2CV:PGCnp
9326ZNHIT3TRIP3zinc finger HIT-type containing 317q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
8396PIP4K2BPI5P4KB | PIP5K2B | PIP5KIIB | PIP5KIIbeta | PIP5P4KBphosphatidylinositol-5-phosphate 4-kinase, type II, beta17q12CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6928HNF1BFJHN | HNF-1-beta | HNF-1B | HNF1beta | HNF2 | HPC11 | LF-B3 | LFB3 | MODY5 | TCF-2 | TCF2 | VHNF1HNF1 homeobox B17q12CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
4905NSFSKD2N-ethylmaleimide sensitive factor17q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7473WNT3INT4 | TETAMSwingless-type MMTV integration site family member 317q21CV:PGCnp
PMID:cooccur
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
3219HOXB9HOX-2.5 | HOX2 | HOX2Ehomeobox B917q21.3CV:PGCnp
DMG:Wockner_2014
Expression
113277TMEM106A-transmembrane protein 106A17q21.31CV:PGCnp
80174DBF4BASKL1 | CHIFB | DRF1 | ZDBF1BDBF4 zinc finger B17q21.31|17q21CV:PGCnp
9043SPAG9CT89 | HLC-6 | HLC4 | HLC6 | JIP-4 | JIP4 | JLP | PHET | PIG6sperm associated antigen 917q21.33CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
252983STXBP4Synipsyntaxin binding protein 417q22CV:PGCnpEXOCYTOSIS
83990BRIP1BACH1 | FANCJ | OFBRCA1 interacting protein C-terminal helicase 117q22.2CV:PGCnp
DMG:Nishioka_2013
57003CCDC47GK001 | MSTP041coiled-coil domain containing 4717q23.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
5573PRKAR1AACRDYS1 | ADOHR | CAR | CNC | CNC1 | PKR1 | PPNAD1 | PRKAR1 | TSE1protein kinase cAMP-dependent type I regulatory subunit alpha17q24.2CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
26207PITPNC1M-RDGB-beta | MRDGBbeta | RDGB-BETA | RDGBB | RDGBB1phosphatidylinositol transfer protein, cytoplasmic 117q24.2CV:PGCnp
DMG:Wockner_2014
10966RAB40BRAR | SEC4LRAB40B, member RAS oncogene family17q25.3CV:PGCnp
162655ZNF519HsT2362zinc finger protein 51918p11.21CV:PGCnp
DMG:Jaffe_2016
9097USP14TGTubiquitin specific peptidase 1418p11.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
9331B4GALT6B4Gal-T6 | beta4Gal-T6UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 618q11CV:PGCnp
PMID:cooccur
220134SKA1C18orf24spindle and kinetochore associated complex subunit 118q21.1CV:PGCnp
DMG:Wockner_2014
596BCL2Bcl-2 | PPP1R50B-cell CLL/lymphoma 218q21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
3998LMAN1ERGIC-53 | ERGIC53 | F5F8D | FMFD1 | MCFD1 | MR60 | gp58lectin, mannose binding 118q21.3-q22CV:GWASdb
CV:PGCnp
284273ZADH2-zinc binding alcohol dehydrogenase domain containing 218q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3385ICAM3CD50 | CDW50 | ICAM-Rintercellular adhesion molecule 319p13.2CV:PGCnp
DMG:Montano_2016
PMID:cooccur
7064THOP1EP24.15 | MEPD_HUMAN | MP78 | TOPthimet oligopeptidase 119p13.3CV:PGCnp
DMG:Wockner_2014
898CCNE1CCNE | pCCNE1cyclin E119q12CV:PGCnp
DMG:Montano_2016
Network
64857PLEKHG2ARHGEF42 | CLG | LDAMDpleckstrin homology and RhoGEF domain containing G219q13.2CV:PGCnp
DMG:Jaffe_2016
284323ZNF780AZNF780zinc finger protein 780A19q13.2CV:PGCnp
112703FAM71E1-family with sequence similarity 71 member E119q13.33CV:PGCnp
10745PHTF1PHTFputative homeodomain transcription factor 11p13CV:PGCnp
DMG:Wockner_2014
GSMA_I
29899GPSM2CMCS | DFNB82 | LGN | PINSG-protein signaling modulator 21p13.3CV:PGCnp
DMG:Wockner_2014
Network
Potential synaptic genes
178AGLGDEamylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase1p21CV:PGCnp
DMG:Jaffe_2016
2135EXTL2EXTR2exostosin-like glycosyltransferase 21p21CV:PGCnp
55599RNPC3RBM40 | RNP | SNRNP65RNA binding region (RNP1, RRM) containing 31p21CV:PGCnp
DMG:Jaffe_2016
163786SASS6MCPH14 | SAS-6 | SAS6SAS-6 centriolar assembly protein1p21.2CV:PGCnp
DMG:Jaffe_2016
58155PTBP2PTBLP | brPTB | nPTBpolypyrimidine tract binding protein 21p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
79871RPAP2C1orf82 | Rtr1RNA polymerase II associated protein 21p22.1CV:PGCnp
84230LRRC8CAD158 | FAD158leucine-rich repeat containing 8 family member C1p22.2CV:PGCnp
DMG:Jaffe_2016
Expression
1629DBTBCATE2 | BCKAD-E2 | BCKADE2 | BCOADC-E2 | E2 | E2Bdihydrolipoamide branched chain transacylase E21p31CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
5563PRKAA2AMPK | AMPK2 | AMPKa2 | PRKAAprotein kinase AMP-activated catalytic subunit alpha 21p31CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
11080DNAJB4DNAJW | DjB4 | HLJ1DnaJ heat shock protein family (Hsp40) member B41p31.1CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
CompositeSet
1491CTH-cystathionine gamma-lyase1p31.1CV:GWAScat
CV:PGCnp
GSMA_IIA
PMID:cooccur
55635DEPDC1DEP.8 | DEPDC1-V2 | DEPDC1A | SDP35DEP domain containing 11p31.2CV:PGCnp
DMG:Nishioka_2013
Expression
GSMA_IIA
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
23499MACF1ABP620 | ACF7 | MACF | OFC4microtubule-actin crosslinking factor 11p32-p31CV:GWASdb
CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1718DHCR24DCE | Nbla03646 | SELADIN1 | seladin-124-dehydrocholesterol reductase1p32.3CV:PGCnp
DMG:Montano_2016
GO_Annotation
7804LRP8APOER2 | HSZ75190 | LRP-8 | MCI1LDL receptor related protein 81p34CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
22955SCMH1Scml3sex comb on midleg homolog 1 (Drosophila)1p34CV:PGCnpChromatin Remodeling Genes
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
8761PABPC4APP-1 | APP1 | PABP4 | iPABPpoly(A) binding protein, cytoplasmic 4 (inducible form)1p34.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
284716RIMKLAFAM80A | NAAGS | NAAGS-IIribosomal modification protein rimK-like family member A1p34.2CV:PGCnp
64834ELOVL1CGI-88 | Ssc1ELOVL fatty acid elongase 11p34.2CV:PGCnp
63967CLSPN-claspin1p34.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
1912PHC2EDR2 | HPH2 | PH2polyhomeotic homolog 21p34.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Chromatin Remodeling Genes
79830ZMYM1MYMzinc finger MYM-type containing 11p34.3CV:PGCnp
DMG:vanEijk_2014
399474TMEM200BTTMBtransmembrane protein 200B1p35CV:PGCnp
6924TCEB3EloA | SIII | SIII p110 | TCEB3Atranscription elongation factor B subunit 31p36.1CV:PGCnp
DMG:Jaffe_2016
5909RAP1GAPRAP1GA1 | RAP1GAP1 | RAP1GAPII | RAPGAPRAP1 GTPase activating protein1p36.1-p35CV:PGCnp
DMG:Wockner_2014
CANABINOID
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
55721IQCC-IQ motif containing C1p36.11-p34.2CV:GWASdb
DMG:Nishioka_2013
DMG:Wockner_2014
56998CTNNBIP1ICATcatenin beta interacting protein 11p36.22CV:PGCnp
DMG:Wockner_2014
Network
23435TARDBPALS10 | TDP-43TAR DNA binding protein1p36.22CV:PGCnp
PMID:cooccur
22883CLSTN1ALC-ALPHA | CDHR12 | CST-1 | CSTN1 | PIK3CD | XB31alpha | alcalpha1 | alcalpha2calsyntenin 11p36.22CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
27173SLC39A1ZIP1 | ZIRTLsolute carrier family 39 member 11q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
126626GABPB2-GA binding protein transcription factor beta subunit 21q21.3CV:PGCnp
DMG:Jaffe_2016
57657HCN3-hyperpolarization activated cyclic nucleotide gated potassium channel 31q22CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
223ALDH9A1ALDH4 | ALDH7 | ALDH9 | E3 | TMABADHaldehyde dehydrogenase 9 family member A11q23.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
10560SLC19A2TC1 | THMD1 | THT1 | THTR1 | TRMAsolute carrier family 19 member 21q23.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
5451POU2F1OCT1 | OTF1 | oct-1BPOU class 2 homeobox 11q24.2CV:PGCnp
DMG:Wockner_2014
26092TOR1AIP1LAP1 | LAP1Btorsin 1A interacting protein 11q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
9019MPZL1MPZL1b | PZR | PZR1b | PZRa | PZRbmyelin protein zero like 11q24.2Association
CV:PGCnp
PMID:cooccur
6646SOAT1ACACT | ACAT | ACAT-1 | ACAT1 | SOAT | STATsterol O-acyltransferase 11q25CV:PGCnp
DNM:Fromer_2014
CompositeSet
9917FAM20Bgxk1family with sequence similarity 20 member B1q25CV:PGCnp
DMG:Jaffe_2016
64222TOR3AADIR | ADIR2torsin family 3 member A1q25.2CV:PGCnp
DMG:Jaffe_2016
259266ASPMASP | Calmbp1 | MCPH5abnormal spindle microtubule assembly1q31CV:PGCnp
GO_Annotation
PMID:cooccur
4194MDM4HDMX | MDMX | MRP1MDM4, p53 regulator1q32CV:PGCnp
Network
PMID:cooccur
25778DSTYKCAKUT1 | DustyPK | HDCMD38P | RIP5 | RIPK5dual serine/threonine and tyrosine protein kinase1q32.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
56256SERTAD4DJ667H12.2SERTA domain containing 41q32.1-q41CV:PGCnp
DMG:Wockner_2014
84886C1orf198-chromosome 1 open reading frame 1981q42.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
148641SLC35F3-solute carrier family 35 member F31q42.2CV:PGCnp
DMG:Wockner_2014
7056THBDAHUS6 | BDCA3 | CD141 | THPH12 | THRM | TMthrombomodulin20p11.2CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
51126NAA20NAT3 | NAT3P | NAT5 | NAT5P | dJ1002M8.1N(alpha)-acetyltransferase 20, NatB catalytic subunit20p11.23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
5621PRNPASCR | AltPrP | CD230 | CJD | GSS | KURU | PRIP | PrP | PrP27-30 | PrP33-35C | PrPc | p27-30prion protein20p13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
57761TRIB3C20orf97 | NIPK | SINK | SKIP3 | TRB3tribbles pseudokinase 320p13-p12.2CV:PGCnp
Network
PMID:cooccur
25939SAMHD1CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88SAM domain and HD domain 120pter-q12CV:PGCnp
DMG:Jaffe_2016
81610FAM83DC20orf129 | CHICA | dJ616B8.3family with sequence similarity 83 member D20q11.23CV:PGCnp
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
1591CYP24A1CP24 | CYP24 | HCAI | P450-CC24cytochrome P450 family 24 subfamily A member 120q13CV:PGCnp
PMID:cooccur
1917EEF1A2EEF1AL | EF-1-alpha-2 | EF1A | EIEE33 | HS1 | MRD38 | STN | STNLeukaryotic translation elongation factor 1 alpha 220q13.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
2778GNASAHO | C20orf45 | GNAS1 | GPSA | GSA | GSP | NESP | POH | SCG6 | SgVIGNAS complex locus20q13.3Association
CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
DOPAMINE
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
54149C21orf91C21orf14 | C21orf38 | CSSG1 | EURL | YG81chromosome 21 open reading frame 9121q21.1CV:PGCnp
1859DYRK1ADYRK | DYRK1 | HP86 | MNB | MNBH | MRD7dual specificity tyrosine phosphorylation regulated kinase 1A21q22.13CV:PGCnp
GO_Annotation
23786BCL2L13BCL-RAMBO | Bcl2-L-13 | MIL1BCL2 like 1322q11.1CV:PGCnp
GSMA_I
25786DGCR11DGS-DDiGeorge syndrome critical region gene 11 (non-protein coding)22q11.21CV:PGCnp
23760PITPNBPI-TP-beta | PtdInsTP | VIB1Bphosphatidylinositol transfer protein beta22q12.1CV:PGCnp
Expression
GSMA_I
157ADRBK2BARK2 | GRK3adrenergic, beta, receptor kinase 222q12.1CV:PGCnp
GSMA_I
PMID:cooccur
9145SYNGR1-synaptogyrin 122q13.1Association
CV:PGCnp
GR_COR
GR_WM
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
23467NPTXRNPRneuronal pentraxin receptor22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Potential synaptic genes
65055REEP1C2orf23 | HMN5B | SPG31 | Yip2areceptor accessory protein 12p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9451EIF2AK3PEK | PERK | WRSeukaryotic translation initiation factor 2 alpha kinase 32p12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
84279PRADC1C2orf7 | PAP21protease-associated domain containing 12p13.2CV:PGCnp
10097ACTR2ARP2ARP2 actin-related protein 2 homolog (yeast)2p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
9736USP34-ubiquitin specific peptidase 342p15CV:PGCnp
Expression
CompositeSet
Darnell FMRP targets
200728TMEM17-transmembrane protein 172p15CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
23683PRKD3EPK2 | PKC-NU | PKD3 | PRKCN | nPKC-NUprotein kinase D32p21CV:PGCnp
LK:YES
PMID:cooccur
6711SPTBN1ELF | HEL102 | SPTB2 | betaSpIIspectrin beta, non-erythrocytic 12p21CV:GWASdb
CV:PGCnp
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5500PPP1CBHEL-S-80p | PP-1B | PP1B | PP1beta | PPP1CDprotein phosphatase 1 catalytic subunit beta2p23CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
79745CLIP4RSNL2CAP-Gly domain containing linker protein family member 42p23.2CV:PGCnp
PMID:cooccur
79635CCDC121-coiled-coil domain containing 1212p23.3CV:PGCnp
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
3790KCNS3KV9.3potassium voltage-gated channel modifier subfamily S member 32p24CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
PMID:cooccur
348654GEN1GenGEN1, Holliday junction 5' flap endonuclease2p24.2CV:PGCnp
7837PXDNCOPOA | D2S448 | D2S448E | MG50 | PRG2 | PXN | VPOperoxidasin2p25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
29841GRHL1LBP32 | MGR | NH32 | TFCP2L2grainyhead like transcription factor 12p25.1CV:PGCnp
Expression
129607CMPK2NDK | TMPK2 | TYKi | UMP-CMPK2cytidine/uridine monophosphate kinase 22p25.2DNM:Fromer_2014CompositeSet
23397NCAPHBRRN1 | CAP-Hnon-SMC condensin I complex subunit H2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10120ACTR1BARP1B | CTRN2 | PC3ARP1 actin-related protein 1 homolog B, centractin beta (yeast)2q11.2CV:PGCnp
GSMA_I
CompositeSet
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
3987LIMS1PINCH | PINCH-1 | PINCH1LIM zinc finger domain containing 12q12.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
150468CKAP2L-cytoskeleton associated protein 2 like2q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
29842TFCP2L1CRTR1 | LBP-9 | LBP9transcription factor CP2-like 12q14CV:PGCnp
DNM:McCarthy_2014
Expression
GSMA_I
GSMA_IIA
84542KIAA1841-KIAA18412q14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
84084RAB6CWTH3RAB6C, member RAS oncogene family2q21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
92ACVR2AACTRII | ACVR2activin A receptor type 2A2q22.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
9111NMI-N-myc and STAT interactor2q23CV:PGCnp
GSMA_IIA
PMID:cooccur
3800KIF5CCDCBM2 | KINN | NKHC | NKHC-2 | NKHC2kinesin family member 5C2q23.1CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8502PKP4p0071plakophilin 42q24.1CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
253782CERS6CERS5 | LASS6ceramide synthase 62q24.3CV:PGCnp
GSMA_IIA
22837COBLL1COBLR1cordon-bleu WH2 repeat protein like 12q24.3CV:GWASdb
CV:PGCnp
GSMA_IIA
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
151126ZNF385BZNF533zinc finger protein 385B2q31.2-q31.3CV:PGCnp
DMG:Jaffe_2016
165215FAM171BKIAA1946family with sequence similarity 171 member B2q32.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
9262STK17BDRAK2serine/threonine kinase 17b2q32.3CV:PGCnp
4664NAB1-NGFI-A binding protein 12q32.3-q33CV:PGCnp
51454GULP1CED-6 | CED6 | GULPGULP, engulfment adaptor PTB domain containing 12q32.3-q33CV:PGCnp
PMID:cooccur
1195CLK1CLK | CLK/STY | STYCDC like kinase 12q33CV:PGCnp
23314SATB2GLSSSATB homeobox 22q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
151246SGOL2SGO2 | TRIPINshugoshin-like 2 (S. pombe)2q33.1CV:PGCnp
Network
92691TMEM169-transmembrane protein 1692q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
580BARD1-BRCA1 associated RING domain 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
151473SLC16A14MCT14solute carrier family 16 member 142q36.3CV:PGCnp
DMG:Wockner_2014
130888FBXO36Fbx36F-box protein 362q36.3CV:PGCnp
DMG:Jaffe_2016
23677SH3BP4BOG25 | TTPSH3-domain binding protein 42q37.1-q37.2CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9208LRRFIP1FLAP-1 | FLAP1 | FLIIAP1 | GCF-2 | GCF2 | HUFI-1 | TRIPleucine rich repeat (in FLII) interacting protein 12q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
9861PSMD6Rpn7 | S10 | SGA-113M | p42A | p44S10proteasome 26S subunit, non-ATPase 63p14.1CV:PGCnp
Network
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
55349CHDH-choline dehydrogenase3p21.1CV:PGCnp
DEG:Zhao_2015
55802DCP1AHSA275986 | Nbla00360 | SMAD4IP1 | SMIFdecapping mRNA 1A3p21.1CV:PGCnp
DMG:Jaffe_2016
Network
7873MANFARMET | ARPmesencephalic astrocyte derived neurotrophic factor3p21.1CV:PGCnp
DMG:Jaffe_2016
57456KIAA1143-KIAA11433p21.31CV:PGCnp
10293TRAIPRNF206 | SCKL9 | TRIPTRAF interacting protein3p21.31CV:PGCnp
93ACVR2BACTRIIB | ActR-IIB | HTX4activin A receptor type 2B3p22CV:PGCnp
GSMA_I
9852EPM2AIP1-EPM2A (laforin) interacting protein 13p22.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9209LRRFIP2HUFI-2leucine rich repeat (in FLII) interacting protein 23p22.2CV:PGCnp
GSMA_I
114884OSBPL10ORP10 | OSBP9oxysterol binding protein like 103p22.3CV:PGCnp
CV:PheWAS
GSMA_I
8850KAT2BCAF | P/CAF | PCAFlysine acetyltransferase 2B3p24CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
5468PPARGCIMT1 | GLM1 | NR1C3 | PPARG1 | PPARG2 | PPARgammaperoxisome proliferator activated receptor gamma3p25CV:PGCnp
GSMA_I
PMID:cooccur
200895DHFRL1DHFRP4dihydrofolate reductase like 13q11.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
10402ST3GAL6SIAT10 | ST3GALVIST3 beta-galactoside alpha-2,3-sialyltransferase 63q12.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_IIA
GSMA_IIE
131566DCBLD2CLCP1 | ESDNdiscoidin, CUB and LCCL domain containing 23q12.1|3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
116064LRRC58-leucine rich repeat containing 583q13.33CV:PGCnp
DMG:Jaffe_2016
55840EAF2BM040 | TRAITS | U19ELL associated factor 23q13.33CV:PGCnp
26577PCOLCE2PCPE2procollagen C-endopeptidase enhancer 23q21-q24CV:GWASdb
CV:PGCnp
79663HSPBAP1PASS1HSPB1 associated protein 13q21.1CV:PGCnp
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
8706B3GALNT1B3GALT3 | GLCT3 | GLOB | Gb4Cer | P | P1 | beta3Gal-T3 | galT3beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)3q25CV:PGCnp
DMG:Jaffe_2016
51319RSRC1BM-011 | SFRS21 | SRrp53arginine/serine-rich coiled-coil 13q25.32CV:PGCnp
PMID:cooccur
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
57552NCEH1AADACL1 | NCEHneutral cholesterol ester hydrolase 13q26.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
64778FNDC3BFAD104 | PRO4979 | YVTM2421fibronectin type III domain containing 3B3q26.31CV:PGCnp
Expression
131118DNAJC19PAM18 | TIM14 | TIMM14DnaJ heat shock protein family (Hsp40) member C193q26.33CV:GWASdb
CV:PGCnp
79929MAP6D1MAPO6D1 | SL21MAP6 domain containing 13q27.1CV:PGCnp
DMG:Wockner_2014
CompositeSet
3556IL1RAPC3orf13 | IL-1RAcP | IL1R3interleukin 1 receptor accessory protein3q28CV:PGCnp
Network
PMID:cooccur
54965PIGXPIG-Xphosphatidylinositol glycan anchor biosynthesis class X3q29CNV:YES
CV:PGCnp
84984CEP19C3orf34 | MOSPGFcentrosomal protein 19kDa3q29CNV:YES
CV:PGCnp
Expression
4976OPA1MGM1 | NPG | NTG | largeGOPA1, mitochondrial dynamin like GTPase3q29CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
CompositeSet
22998LIMCH1LIMCH1A | LMO7BLIM and calponin homology domains 14p13CV:GWASdb
CV:PGCnp
55728N4BP2B3BPNEDD4 binding protein 24p14CV:PGCnp
DMG:Wockner_2014
5099PCDH7BH-Pcdh | BHPCDH | PPP1R120protocadherin 74p15CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
57732ZFYVE28LST2 | LYST2zinc finger FYVE-type containing 284p16.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
5471PPATATASE | GPAT | PRATphosphoribosyl pyrophosphate amidotransferase4q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
10874NMU-neuromedin U4q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
685BTC-betacellulin4q13.3CV:PGCnp
Expression
57563KLHL8-kelch like family member 84q22.1CV:PGCnp
DMG:Wockner_2014
255743NPNTEGFL6L | POEMnephronectin4q24CV:GWASdb
CV:PGCnp
64116SLC39A8BIGM103 | CDG2N | LZT-Hs6 | PP3105 | ZIP8solute carrier family 39 member 84q24CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
166929SGMS2SMS2sphingomyelin synthase 24q25CV:PGCnp
2247FGF2BFGF | FGF-2 | FGFB | HBGF-2fibroblast growth factor 24q26CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
7368UGT8CGT | UGT4UDP glycosyltransferase 84q26CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
9871SEC24DCLCRP2SEC24 homolog D, COPII coat complex component4q26CV:PGCnp
DMG:Jaffe_2016
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
55212BBS7BBS2L1Bardet-Biedl syndrome 74q27CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
23657SLC7A11CCBR1 | xCTsolute carrier family 7 member 114q28.3CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
85462FHDC1-FH2 domain containing 14q31.3CV:PGCnp
CV:PheWAS
4750NEK1NY-REN-55 | SRPS2 | SRPS2A | SRTD6NIMA related kinase 14q33CV:GWASdb
CV:PGCnp
8819SAP30-Sin3A associated protein 30kDa4q34.1CV:PGCnp
DEG:Maycox_2009
56977STOX2-storkhead box 24q35.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
3157HMGCS1HMGCS3-hydroxy-3-methylglutaryl-CoA synthase 15p12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
114899C1QTNF3C1ATNF3 | CORCS | CORS | CORS-26 | CORS26 | CTRP3C1q and tumor necrosis factor related protein 35p13PMID:cooccur
54545MTMR123-PAP | PIP3APmyotubularin related protein 125p13.3CV:PGCnp
PMID:cooccur
6715SRD5A1S5AR 1steroid 5 alpha-reductase 15p15CV:PGCnp
PMID:cooccur
11044PAPD7LAK-1 | LAK1 | POLK | POLS | TRF4 | TRF4-1 | TRF41 | TUTASE5PAP associated domain containing 75p15CV:PGCnpAscano FMRP targets
50805IRX4IRXA3iroquois homeobox 45p15.3CV:PGCnp
DMG:Jaffe_2016
133418EMBGP70embigin5q11.1CV:PGCnp
27292DIMT1DIM1 | DIMT1L | HSA9761 | HUSSY5DIM1 dimethyladenosine transferase 1 homolog5q12.1CV:PGCnp
DMG:Jaffe_2016
8507ENC1CCL28 | ENC-1 | KLHL35 | KLHL37 | NRPB | PIG10 | TP53I10ectodermal-neural cortex 15q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
83734ATG10APG10 | APG10L | pp12616autophagy related 105q14.1CV:PGCnp
116068LYSMD3-LysM domain containing 35q14.3CV:PGCnp
DMG:Jaffe_2016
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
22936ELL2-elongation factor for RNA polymerase II 25q15CV:PGCnp
DMG:Wockner_2014
Expression
324APCBTPS2 | DP2 | DP2.5 | DP3 | GS | PPP1R46adenomatous polyposis coli5q21-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
90355C5orf30-chromosome 5 open reading frame 305q21.1CV:GWASdb
CV:PGCnp
814CAMK4CaMK IV | CaMK-GR | IV | caMKcalcium/calmodulin-dependent protein kinase IV5q21.3CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
1839HBEGFDTR | DTS | DTSF | HEGFLheparin binding EGF like growth factor5q23CV:PGCnp
GSMA_I
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
337876CHSY3CHSY2 | CSS3chondroitin sulfate synthase 35q23.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Ascano FMRP targets
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1958EGR1AT225 | G0S30 | KROX-24 | NGFI-A | TIS8 | ZIF-268 | ZNF225early growth response 15q31.1CV:PGCnp
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
6932TCF7TCF-1transcription factor 7 (T-cell specific, HMG-box)5q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
7322UBE2D2E2(17)KB2 | PUBC1 | UBC4 | UBC4/5 | UBCH4 | UBCH5Bubiquitin conjugating enzyme E2 D25q31.2CV:PGCnp
GSMA_I
81848SPRY4HH17sprouty RTK signaling antagonist 45q31.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
134265AFAP1L1-actin filament associated protein 1 like 15q32CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
51520LARSHSPC192 | ILFS1 | LARS1 | LEURS | LEUS | LFIS | LRS | PIG44 | RNTLS | hr025Clleucyl-tRNA synthetase5q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
1836SLC26A2D5S1708 | DTD | DTDST | EDM4 | MST153 | MSTP157solute carrier family 26 member 25q32CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
57396CLK4-CDC like kinase 45q35CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
51715RAB23HSPC137RAB23, member RAS oncogene family6p11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
54887UHRF1BP1C6orf107 | ICBP90 | dJ349A12.1UHRF1 binding protein 16p21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
22875ENPP4NPP4ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)6p21.1CV:PGCnp
GSMA_IIE
5292PIM1PIMPim-1 proto-oncogene, serine/threonine kinase6p21.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
170954PPP1R18HKMT1098 | KIAA1949protein phosphatase 1 regulatory subunit 186p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
4800NFYACBF-A | CBF-B | HAP2 | NF-YAnuclear transcription factor Y subunit alpha6p21.3CV:GWASdb
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
7718ZNF165CT53 | LD65 | ZSCAN7zinc finger protein 1656p21.3CV:PGCnp
GSMA_I
7738ZNF184kr-ZNF3zinc finger protein 1846p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9656MDC1NFBD1mediator of DNA damage checkpoint 16p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
7918GPANK1ANKRD59 | BAT4 | D6S54E | G5 | GPATCH10G-patch domain and ankyrin repeats 16p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7915ALDH5A1SSADH | SSDHaldehyde dehydrogenase 5 family member A16p22CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
221656KDM1BAOF1 | C6orf193 | LSD2 | bA204B7.3 | dJ298J15.2lysine demethylase 1B6p22.3CV:GWASdb
CV:PGCnp
GSMA_I
Chromatin Remodeling Genes
81688C6orf62Nbla00237 | XTP12 | dJ30M3.2chromosome 6 open reading frame 626p22.3CV:PGCnp
GSMA_I
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9308CD83BL11 | HB15CD83 molecule6p23CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
100113407TMEM170B-transmembrane protein 170B6p24.2CV:PGCnp
54438GFOD1ADG-90 | C6orf114glucose-fructose oxidoreductase domain containing 16pter-p22.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GSMA_I
CompositeSet
10492SYNCRIPGRY-RBP | GRYRBP | HNRNPQ | HNRPQ1 | NSAP1 | PP68 | hnRNP-Qsynaptotagmin binding, cytoplasmic RNA interacting protein6q14-q15CV:PGCnp
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
55754TMEM30AC6orf67 | CDC50Atransmembrane protein 30A6q14.1CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
5238PGM3AGM1 | IMD23 | PAGM | PGM 3phosphoglucomutase 36q14.1-q15CV:PGCnp
22881ANKRD6-ankyrin repeat domain 66q15CV:PGCnp
DMG:Wockner_2014
11231SEC63DNAJC23 | ERdj2 | PRO2507 | SEC63LSEC63 homolog, protein translocation regulator6q21CV:GWAScat
CV:GWASdb
CV:PGCnp
8763CD164DFNA66 | MGC-24 | MUC-24 | endolynCD164 molecule6q21CV:PGCnp
DMG:Jaffe_2016
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
3841KPNA5IPOA6 | SRP6karyopherin subunit alpha 56q22.1CV:GWASdb
CV:PGCnp
254394MCM9C6orf61 | MCMDC1 | ODG4 | dJ329L24.1 | dJ329L24.3minichromosome maintenance 9 homologous recombination repair factor6q22.31CV:PGCnp
154075SAMD3-sterile alpha motif domain containing 36q23.1CV:PGCnp
Expression
114801TMEM200AKIAA1913 | TTMA | TTMCtransmembrane protein 200A6q23.1CV:PGCnp
8417STX7-syntaxin 76q23.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
57224NHSL1C6orf63NHS like 16q23.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
7957EPM2AEPM2 | MELFepilepsy, progressive myoclonus type 2A, Lafora disease (laforin)6q24CV:PGCnp
PMID:cooccur
26271FBXO5EMI1 | FBX5 | Fbxo31F-box protein 56q25.2CV:GWASdb
CV:PGCnp
55274PHF10BAF45A | XAP135PHD finger protein 106q27CV:PGCnp
DMG:Wockner_2014
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
3209HOXA13HOX1 | HOX1Jhomeobox A137p15.2CV:PGCnp
DMG:Wockner_2014
11112HIBADHNS5ATP13-hydroxyisobutyrate dehydrogenase7p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6671SP4HF1B | SPR-1Sp4 transcription factor7p15.3CV:GWASdb
CV:PGCnp
PMID:cooccur
113263GLCCI1FAM117C | GCTR | GIG18 | TSSN1glucocorticoid induced 17p21.3CV:PGCnp
DMG:Wockner_2014
55501CHST12C4S-2 | C4ST-2 | C4ST2carbohydrate (chondroitin 4) sulfotransferase 127p22CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
55972SLC25A40MCFPsolute carrier family 25 member 407q21.12CV:PGCnp
2861GPR37EDNRBL | PAELR | hET(B)R-LPG protein-coupled receptor 377q31CV:PGCnp
DMG:Jaffe_2016
93664CADPS2-Ca2+ dependent secretion activator 27q31.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
Potential synaptic genes
4189DNAJB9ERdj4 | MDG-1 | MDG1 | MST049 | MSTP049DnaJ heat shock protein family (Hsp40) member B97q31|14q24.2-q24.3CV:PGCnp
5420PODXLGp200 | PC | PCLP | PCLP-1podocalyxin like7q32-q33CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
84912SLC35B4YEA | YEA4solute carrier family 35 member B47q33CV:PGCnp
PMID:cooccur
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
10947AP3M2AP47B | CLA20 | P47Badaptor related protein complex 3 mu 2 subunit8p11.2CV:PGCnp
DMG:Jaffe_2016
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
54904WHSC1L1NSD3 | WHISTLE | pp14328Wolf-Hirschhorn syndrome candidate 1-like 18p11.2CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
84376HOOK3HK3hook microtubule-tethering protein 38p11.21CV:PGCnp
PMID:cooccur
157570ESCO22410004I17Rik | EFO2 | RBSestablishment of sister chromatid cohesion N-acetyltransferase 28p21.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
9788MTSS1MIM | MIMA | MIMBmetastasis suppressor 18p22CV:GWASdb
CV:PGCnp
GO_Annotation
6542SLC7A2ATRC2 | CAT2 | HCAT2solute carrier family 7 member 28p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
51201ZDHHC2DHHC2 | ZNF372zinc finger DHHC-type containing 28p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
9639ARHGEF10GEF10 | SNCVRho guanine nucleotide exchange factor 108p23Association
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
55326AGPAT51AGPAT5 | LPAATE1-acylglycerol-3-phosphate O-acyltransferase 58p23.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
3574IL7IL-7interleukin 78q12-q13CV:GWASdb
CV:PGCnp
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
767CA8CA-VIII | CALS | CAMRQ3 | CARPcarbonic anhydrase VIII8q12.1CV:PGCnp
DMG:Nishioka_2013
55636CHD7CRG | HH5 | IS3 | KAL5chromodomain helicase DNA binding protein 78q12.2CV:GWASdb
CV:PGCnp
Ascano FMRP targets
7274TTPAATTP | AVED | TTP1 | alphaTTPtocopherol (alpha) transfer protein8q12.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
157807CLVS1CRALBPL | RLBP1L1clavesin 18q12.3CV:PGCnp
CV:PheWAS
254778C8orf46-chromosome 8 open reading frame 468q13.1CV:PGCnp
4683NBNAT-V1 | AT-V2 | ATV | NBS | NBS1 | P95nibrin8q21CV:PGCnp
55284UBE2WUBC-16 | UBC16ubiquitin conjugating enzyme E2 W (putative)8q21.11CV:PGCnp
DMG:Jaffe_2016
3612IMPA1IMP | IMPAinositol(myo)-1(or 4)-monophosphatase 18q21.13-q21.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
377677CA13CAXIIIcarbonic anhydrase XIII8q21.2CV:PGCnp
DMG:Jaffe_2016
92140MTDH3D3 | AEG-1 | AEG1 | LYRIC | LYRIC/3D3metadherin8q22.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
25788RAD54BRDH54RAD54 homolog B (S. cerevisiae)8q22.1CV:PGCnp
DMG:Nishioka_2013
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
10656KHDRBS3Etle | SALP | SLM-2 | SLM2 | T-STAR | TSTAR | etoileKH domain containing, RNA binding, signal transduction associated 38q24.2CV:PGCnp
DMG:Wockner_2014
79937CNTNAP3CASPR3 | CNTNAP3Acontactin associated protein-like 39p13.1CV:PGCnp
GO_Annotation
PMID:cooccur
25822DNAJB5Hsc40DnaJ heat shock protein family (Hsp40) member B59p13.3CV:PGCnp
347240KIF24C9orf48 | bA571F15.4kinesin family member 249p13.3CV:PGCnp
DNM:Guipponi_2014
1029CDKN2AARF | CDK4I | CDKN2 | CMM2 | INK4 | INK4A | MLM | MTS-1 | MTS1 | P14 | P14ARF | P16 | P16-INK4A | P16INK4 | P16INK4A | P19 | P19ARF | TP16cyclin-dependent kinase inhibitor 2A9p21CV:PGCnp
DMG:Nishioka_2013
Network
6595SMARCA2BAF190 | BRM | NCBRS | SNF2 | SNF2L2 | SNF2LA | SWI2 | Sth1p | hBRM | hSNF2aSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 29p22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
79956ERMP1FXNA | KIAA1815 | bA207C16.3endoplasmic reticulum metallopeptidase 19p24CV:PGCnp
DMG:Jaffe_2016
4781NFIBCTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3nuclear factor I/B9p24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
9414TJP2C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2tight junction protein 29q13-q21CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
9413FAM189A2C9orf61 | X123family with sequence similarity 189 member A29q21.11CV:PGCnp
DNM:Guipponi_2014
23670TMEM2-transmembrane protein 29q21.13CV:PGCnp
DMG:Jaffe_2016
Expression
Ascano FMRP targets
10507SEMA4DC9orf164 | CD100 | M-sema-G | SEMAJ | coll-4semaphorin 4D9q22.2CV:PGCnp
GO_Annotation
PMID:cooccur
158293FAM120AOSC9orf10OSfamily with sequence similarity 120A opposite strand9q22.31CV:PGCnp
79695GALNT12CRCS1 | GalNAc-T12polypeptide N-acetylgalactosaminyltransferase 129q22.33CV:PGCnp
DMG:Wockner_2014
54534MRPL50MRP-L50mitochondrial ribosomal protein L509q31.1DMG:Jaffe_2016
DMG:vanEijk_2014
9550ATP6V1G1ATP6G | ATP6G1 | ATP6GL | ATP6J | Vma10ATPase H+ transporting V1 subunit G19q32CV:PGCnp
158405KIAA1958-KIAA19589q32CV:GWASdb
CV:PGCnp
26147PHF19MTF2L1 | PCL3 | TDRD19BPHD finger protein 199q33.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
57706DENND1AFAM31A | KIAA1608DENN domain containing 1A9q33.3CV:PGCnp
CV:PheWAS
403341ZBTB34ZNF918zinc finger and BTB domain containing 349q33.3CV:PGCnp
27348TOR1BDQ1torsin family 1 member B9q34CV:GWASdb
CV:PGCnp
6837MED22MED24 | SURF5 | surf-5mediator complex subunit 229q34.2CV:PGCnp
9858PPP1R26KIAA0649protein phosphatase 1 regulatory subunit 269q34.3CV:PGCnp
158055C9orf163-chromosome 9 open reading frame 1639q34.3CV:PGCnp
1654DDX3XCAP-Rf | DBX | DDX14 | DDX3 | HLP2 | MRX102DEAD-box helicase 3, X-linkedXp11.3-p11.23CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
7504XKKX | MCLDS | NA | NAC | X1k | XKR1X-linked Kx blood groupXp21.1CV:PGCnp
PMID:cooccur
55841WWC3BM042WWC family member 3Xp22.32CV:GWASdb
CV:PGCnp
4478MSNHEL70moesinXq11.1GO_Annotation
Network
PMID:cooccur
CompositeSet
Potential synaptic genes
1121CHMDXS540 | GGTA | HSD-32 | REP-1 | TCDCHM, Rab escort protein 1Xq21.2CV:PGCnp
PMID:cooccur
5358PLS3BMND18 | T-plastinplastin 3Xq23CV:PGCnp
DMG:Nishioka_2013
331XIAPAPI3 | BIRC4 | IAP-3 | ILP1 | MIHA | XLP2 | hIAP-3 | hIAP3X-linked inhibitor of apoptosisXq25CV:PGCnp
Network
PMID:cooccur
63035BCORL1BCoR-L1 | CXorf10BCL6 corepressor-like 1Xq25-q26.1CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
84295PHF6BFLS | BORJ | CENP-31PHD finger protein 6Xq26.3CV:PGCnp
PMID:cooccur
3654IRAK1IRAK | pelleinterleukin 1 receptor associated kinase 1Xq28CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes