Gene Page: KIAA1841
Summary ?
| GeneID | 84542 |
| Symbol | KIAA1841 |
| Synonyms | - |
| Description | KIAA1841 |
| Reference | HGNC:HGNC:29387|Ensembl:ENSG00000162929|HPRD:13896|Vega:OTTHUMG00000187089 |
| Gene type | protein-coding |
| Map location | 2q14 |
| Pascal p-value | 0.307 |
| Sherlock p-value | 0.894 |
| Fetal beta | 1.835 |
| DMG | 1 (# studies) |
| eGene | Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Nucleus accumbens basal ganglia Putamen basal ganglia |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:GWASdb | Genome-wide Association Studies | GWASdb records for schizophrenia | |
| CV:PGCnp | Genome-wide Association Study | GWAS | |
| DMG:Wockner_2014 | Genome-wide DNA methylation analysis | This dataset includes 4641 differentially methylated probes corresponding to 2929 unique genes between schizophrenia patients (n=24) and controls (n=24). | 1 |
Section I. Genetics and epigenetics annotation
Differentially methylated gene
| Probe | Chromosome | Position | Nearest gene | P (dis) | Beta (dis) | FDR (dis) | Study |
|---|---|---|---|---|---|---|---|
| cg13484946 | 2 | 61293354 | KIAA1841 | 3.07E-5 | -0.365 | 0.019 | DMG:Wockner_2014 |
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs2441463 | 2 | 61331578 | KIAA1841 | ENSG00000162929.9 | 6.474E-7 | 0 | 38572 | gtex_brain_putamen_basal |
| rs1177263 | 2 | 61334789 | KIAA1841 | ENSG00000162929.9 | 3.155E-6 | 0 | 41783 | gtex_brain_putamen_basal |
| rs1177262 | 2 | 61335795 | KIAA1841 | ENSG00000162929.9 | 1.537E-6 | 0 | 42789 | gtex_brain_putamen_basal |
| rs1177261 | 2 | 61336718 | KIAA1841 | ENSG00000162929.9 | 3.188E-6 | 0 | 43712 | gtex_brain_putamen_basal |
| rs1177266 | 2 | 61338187 | KIAA1841 | ENSG00000162929.9 | 3.016E-6 | 0 | 45181 | gtex_brain_putamen_basal |
| rs1177264 | 2 | 61340450 | KIAA1841 | ENSG00000162929.9 | 2.992E-6 | 0 | 47444 | gtex_brain_putamen_basal |
| rs1624236 | 2 | 61345481 | KIAA1841 | ENSG00000162929.9 | 3.361E-7 | 0 | 52475 | gtex_brain_putamen_basal |
| rs1177290 | 2 | 61346133 | KIAA1841 | ENSG00000162929.9 | 3.926E-7 | 0 | 53127 | gtex_brain_putamen_basal |
| rs1177293 | 2 | 61348080 | KIAA1841 | ENSG00000162929.9 | 4.397E-7 | 0 | 55074 | gtex_brain_putamen_basal |
| rs1177283 | 2 | 61348804 | KIAA1841 | ENSG00000162929.9 | 2.833E-7 | 0 | 55798 | gtex_brain_putamen_basal |
| rs1177285 | 2 | 61350137 | KIAA1841 | ENSG00000162929.9 | 1.044E-6 | 0 | 57131 | gtex_brain_putamen_basal |
| rs114498878 | 2 | 61351187 | KIAA1841 | ENSG00000162929.9 | 3.861E-6 | 0 | 58181 | gtex_brain_putamen_basal |
| rs114317312 | 2 | 61351188 | KIAA1841 | ENSG00000162929.9 | 3.838E-6 | 0 | 58182 | gtex_brain_putamen_basal |
| rs114015142 | 2 | 61351189 | KIAA1841 | ENSG00000162929.9 | 3.855E-6 | 0 | 58183 | gtex_brain_putamen_basal |
| rs1177286 | 2 | 61351890 | KIAA1841 | ENSG00000162929.9 | 2.833E-7 | 0 | 58884 | gtex_brain_putamen_basal |
| rs1177288 | 2 | 61352985 | KIAA1841 | ENSG00000162929.9 | 2.833E-7 | 0 | 59979 | gtex_brain_putamen_basal |
| rs1177289 | 2 | 61353256 | KIAA1841 | ENSG00000162929.9 | 2.879E-7 | 0 | 60250 | gtex_brain_putamen_basal |
| rs1177282 | 2 | 61357777 | KIAA1841 | ENSG00000162929.9 | 1.861E-8 | 0 | 64771 | gtex_brain_putamen_basal |
| rs2698194 | 2 | 61363196 | KIAA1841 | ENSG00000162929.9 | 1.559E-7 | 0 | 70190 | gtex_brain_putamen_basal |
| rs2592491 | 2 | 61363289 | KIAA1841 | ENSG00000162929.9 | 3.936E-8 | 0 | 70283 | gtex_brain_putamen_basal |
| rs1729660 | 2 | 61365812 | KIAA1841 | ENSG00000162929.9 | 2.302E-8 | 0 | 72806 | gtex_brain_putamen_basal |
| rs1177271 | 2 | 61366704 | KIAA1841 | ENSG00000162929.9 | 1.113E-7 | 0 | 73698 | gtex_brain_putamen_basal |
| rs1177272 | 2 | 61368260 | KIAA1841 | ENSG00000162929.9 | 1.914E-8 | 0 | 75254 | gtex_brain_putamen_basal |
| rs1177273 | 2 | 61368353 | KIAA1841 | ENSG00000162929.9 | 2.665E-8 | 0 | 75347 | gtex_brain_putamen_basal |
| rs1665264 | 2 | 61369159 | KIAA1841 | ENSG00000162929.9 | 2.08E-8 | 0 | 76153 | gtex_brain_putamen_basal |
| rs1729667 | 2 | 61369160 | KIAA1841 | ENSG00000162929.9 | 2.08E-8 | 0 | 76154 | gtex_brain_putamen_basal |
| rs11498 | 2 | 61370819 | KIAA1841 | ENSG00000162929.9 | 2.532E-8 | 0 | 77813 | gtex_brain_putamen_basal |
| rs397965048 | 2 | 61371110 | KIAA1841 | ENSG00000162929.9 | 4.124E-8 | 0 | 78104 | gtex_brain_putamen_basal |
| rs1177275 | 2 | 61371478 | KIAA1841 | ENSG00000162929.9 | 2.532E-8 | 0 | 78472 | gtex_brain_putamen_basal |
| rs11688322 | 2 | 61371507 | KIAA1841 | ENSG00000162929.9 | 1.975E-8 | 0 | 78501 | gtex_brain_putamen_basal |
| rs1177276 | 2 | 61371701 | KIAA1841 | ENSG00000162929.9 | 3.78E-8 | 0 | 78695 | gtex_brain_putamen_basal |
| rs1177277 | 2 | 61371723 | KIAA1841 | ENSG00000162929.9 | 2.802E-7 | 0 | 78717 | gtex_brain_putamen_basal |
| rs1177278 | 2 | 61371758 | KIAA1841 | ENSG00000162929.9 | 2.532E-8 | 0 | 78752 | gtex_brain_putamen_basal |
| rs3213944 | 2 | 61372298 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 79292 | gtex_brain_putamen_basal |
| rs34279970 | 2 | 61372507 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 79501 | gtex_brain_putamen_basal |
| rs2441467 | 2 | 61374149 | KIAA1841 | ENSG00000162929.9 | 2.522E-8 | 0 | 81143 | gtex_brain_putamen_basal |
| rs1729656 | 2 | 61374283 | KIAA1841 | ENSG00000162929.9 | 2.318E-8 | 0 | 81277 | gtex_brain_putamen_basal |
| rs59913987 | 2 | 61374343 | KIAA1841 | ENSG00000162929.9 | 5.041E-8 | 0 | 81337 | gtex_brain_putamen_basal |
| rs201039802 | 2 | 61374354 | KIAA1841 | ENSG00000162929.9 | 3.345E-7 | 0 | 81348 | gtex_brain_putamen_basal |
| rs1729655 | 2 | 61374502 | KIAA1841 | ENSG00000162929.9 | 2.405E-8 | 0 | 81496 | gtex_brain_putamen_basal |
| rs2592496 | 2 | 61375063 | KIAA1841 | ENSG00000162929.9 | 2.921E-8 | 0 | 82057 | gtex_brain_putamen_basal |
| rs720201 | 2 | 61376463 | KIAA1841 | ENSG00000162929.9 | 2.339E-8 | 0 | 83457 | gtex_brain_putamen_basal |
| rs1729654 | 2 | 61376909 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 83903 | gtex_brain_putamen_basal |
| rs1729653 | 2 | 61377008 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 84002 | gtex_brain_putamen_basal |
| rs1665270 | 2 | 61377666 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 84660 | gtex_brain_putamen_basal |
| rs1729652 | 2 | 61378019 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 85013 | gtex_brain_putamen_basal |
| rs1617806 | 2 | 61378186 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 85180 | gtex_brain_putamen_basal |
| rs1616938 | 2 | 61378300 | KIAA1841 | ENSG00000162929.9 | 2.111E-8 | 0 | 85294 | gtex_brain_putamen_basal |
| rs1665271 | 2 | 61378816 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 85810 | gtex_brain_putamen_basal |
| rs11125869 | 2 | 61379533 | KIAA1841 | ENSG00000162929.9 | 2.453E-8 | 0 | 86527 | gtex_brain_putamen_basal |
| rs11125870 | 2 | 61379625 | KIAA1841 | ENSG00000162929.9 | 1.851E-8 | 0 | 86619 | gtex_brain_putamen_basal |
| rs12616041 | 2 | 61379844 | KIAA1841 | ENSG00000162929.9 | 3.154E-8 | 0 | 86838 | gtex_brain_putamen_basal |
| rs1665273 | 2 | 61379944 | KIAA1841 | ENSG00000162929.9 | 3.139E-8 | 0 | 86938 | gtex_brain_putamen_basal |
| rs1665274 | 2 | 61380088 | KIAA1841 | ENSG00000162929.9 | 2.664E-8 | 0 | 87082 | gtex_brain_putamen_basal |
| rs33998984 | 2 | 61380508 | KIAA1841 | ENSG00000162929.9 | 3.103E-8 | 0 | 87502 | gtex_brain_putamen_basal |
| rs111543747 | 2 | 61380622 | KIAA1841 | ENSG00000162929.9 | 1.005E-6 | 0 | 87616 | gtex_brain_putamen_basal |
| rs112695134 | 2 | 61381018 | KIAA1841 | ENSG00000162929.9 | 2.805E-8 | 0 | 88012 | gtex_brain_putamen_basal |
| rs201562237 | 2 | 61381035 | KIAA1841 | ENSG00000162929.9 | 3.124E-8 | 0 | 88029 | gtex_brain_putamen_basal |
| rs2592494 | 2 | 61381528 | KIAA1841 | ENSG00000162929.9 | 1.4E-8 | 0 | 88522 | gtex_brain_putamen_basal |
| rs2592493 | 2 | 61382337 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 89331 | gtex_brain_putamen_basal |
| rs1665263 | 2 | 61382759 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 89753 | gtex_brain_putamen_basal |
| rs1665262 | 2 | 61383162 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 90156 | gtex_brain_putamen_basal |
| rs1665261 | 2 | 61384314 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 91308 | gtex_brain_putamen_basal |
| rs1665260 | 2 | 61384487 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 91481 | gtex_brain_putamen_basal |
| rs1665259 | 2 | 61384755 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 91749 | gtex_brain_putamen_basal |
| rs7558954 | 2 | 61384906 | KIAA1841 | ENSG00000162929.9 | 5.033E-8 | 0 | 91900 | gtex_brain_putamen_basal |
| rs1665258 | 2 | 61385100 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 92094 | gtex_brain_putamen_basal |
| rs1729671 | 2 | 61385105 | KIAA1841 | ENSG00000162929.9 | 2.036E-8 | 0 | 92099 | gtex_brain_putamen_basal |
| rs1177309 | 2 | 61385248 | KIAA1841 | ENSG00000162929.9 | 5.033E-8 | 0 | 92242 | gtex_brain_putamen_basal |
| rs1177308 | 2 | 61387254 | KIAA1841 | ENSG00000162929.9 | 5.743E-8 | 0 | 94248 | gtex_brain_putamen_basal |
| rs1177307 | 2 | 61387388 | KIAA1841 | ENSG00000162929.9 | 4.911E-8 | 0 | 94382 | gtex_brain_putamen_basal |
| rs1177306 | 2 | 61387836 | KIAA1841 | ENSG00000162929.9 | 2.642E-8 | 0 | 94830 | gtex_brain_putamen_basal |
| rs1177305 | 2 | 61387871 | KIAA1841 | ENSG00000162929.9 | 6.239E-8 | 0 | 94865 | gtex_brain_putamen_basal |
| rs1177303 | 2 | 61388355 | KIAA1841 | ENSG00000162929.9 | 3.515E-8 | 0 | 95349 | gtex_brain_putamen_basal |
| rs1177302 | 2 | 61388390 | KIAA1841 | ENSG00000162929.9 | 7.957E-8 | 0 | 95384 | gtex_brain_putamen_basal |
| rs1729674 | 2 | 61389737 | KIAA1841 | ENSG00000162929.9 | 7.983E-8 | 0 | 96731 | gtex_brain_putamen_basal |
| rs1729673 | 2 | 61389799 | KIAA1841 | ENSG00000162929.9 | 3.366E-8 | 0 | 96793 | gtex_brain_putamen_basal |
| rs201906168 | 2 | 61390744 | KIAA1841 | ENSG00000162929.9 | 7.454E-8 | 0 | 97738 | gtex_brain_putamen_basal |
| rs3889717 | 2 | 61390791 | KIAA1841 | ENSG00000162929.9 | 8.694E-8 | 0 | 97785 | gtex_brain_putamen_basal |
| rs1615070 | 2 | 61393175 | KIAA1841 | ENSG00000162929.9 | 1.219E-7 | 0 | 100169 | gtex_brain_putamen_basal |
| rs12999245 | 2 | 61393890 | KIAA1841 | ENSG00000162929.9 | 6.037E-8 | 0 | 100884 | gtex_brain_putamen_basal |
| rs55908966 | 2 | 61394297 | KIAA1841 | ENSG00000162929.9 | 3.298E-8 | 0 | 101291 | gtex_brain_putamen_basal |
| rs35015708 | 2 | 61396193 | KIAA1841 | ENSG00000162929.9 | 4.023E-7 | 0 | 103187 | gtex_brain_putamen_basal |
| rs35341794 | 2 | 61396200 | KIAA1841 | ENSG00000162929.9 | 3.015E-7 | 0 | 103194 | gtex_brain_putamen_basal |
| rs60997156 | 2 | 61396539 | KIAA1841 | ENSG00000162929.9 | 1.627E-7 | 0 | 103533 | gtex_brain_putamen_basal |
| rs35507645 | 2 | 61396766 | KIAA1841 | ENSG00000162929.9 | 1.395E-7 | 0 | 103760 | gtex_brain_putamen_basal |
| rs11685226 | 2 | 61397127 | KIAA1841 | ENSG00000162929.9 | 6.116E-8 | 0 | 104121 | gtex_brain_putamen_basal |
| rs72884963 | 2 | 61397778 | KIAA1841 | ENSG00000162929.9 | 2.125E-8 | 0 | 104772 | gtex_brain_putamen_basal |
| rs11886950 | 2 | 61399317 | KIAA1841 | ENSG00000162929.9 | 7.001E-8 | 0 | 106311 | gtex_brain_putamen_basal |
| rs11903270 | 2 | 61399347 | KIAA1841 | ENSG00000162929.9 | 5.83E-8 | 0 | 106341 | gtex_brain_putamen_basal |
| rs11897994 | 2 | 61399529 | KIAA1841 | ENSG00000162929.9 | 5.83E-8 | 0 | 106523 | gtex_brain_putamen_basal |
| rs2600668 | 2 | 61400427 | KIAA1841 | ENSG00000162929.9 | 4.536E-8 | 0 | 107421 | gtex_brain_putamen_basal |
| rs2167564 | 2 | 61400816 | KIAA1841 | ENSG00000162929.9 | 1.669E-8 | 0 | 107810 | gtex_brain_putamen_basal |
| rs2600670 | 2 | 61402714 | KIAA1841 | ENSG00000162929.9 | 1.603E-8 | 0 | 109708 | gtex_brain_putamen_basal |
| rs112583316 | 2 | 61404514 | KIAA1841 | ENSG00000162929.9 | 3.187E-8 | 0 | 111508 | gtex_brain_putamen_basal |
| rs935860 | 2 | 61406561 | KIAA1841 | ENSG00000162929.9 | 1.781E-7 | 0 | 113555 | gtex_brain_putamen_basal |
| rs777584 | 2 | 61410346 | KIAA1841 | ENSG00000162929.9 | 1.658E-7 | 0 | 117340 | gtex_brain_putamen_basal |
| rs14170 | 2 | 61415492 | KIAA1841 | ENSG00000162929.9 | 2.722E-8 | 0 | 122486 | gtex_brain_putamen_basal |
| rs777587 | 2 | 61427675 | KIAA1841 | ENSG00000162929.9 | 3.285E-8 | 0 | 134669 | gtex_brain_putamen_basal |
| rs4671398 | 2 | 61440507 | KIAA1841 | ENSG00000162929.9 | 2.468E-8 | 0 | 147501 | gtex_brain_putamen_basal |
| rs2123112 | 2 | 61442075 | KIAA1841 | ENSG00000162929.9 | 2.269E-8 | 0 | 149069 | gtex_brain_putamen_basal |
| rs6545846 | 2 | 61442910 | KIAA1841 | ENSG00000162929.9 | 5.383E-9 | 0 | 149904 | gtex_brain_putamen_basal |
| rs4672424 | 2 | 61444773 | KIAA1841 | ENSG00000162929.9 | 1.007E-7 | 0 | 151767 | gtex_brain_putamen_basal |
| rs2123111 | 2 | 61450454 | KIAA1841 | ENSG00000162929.9 | 3.037E-8 | 0 | 157448 | gtex_brain_putamen_basal |
| rs150827710 | 2 | 61459977 | KIAA1841 | ENSG00000162929.9 | 9.475E-7 | 0 | 166971 | gtex_brain_putamen_basal |
| rs17540852 | 2 | 61460549 | KIAA1841 | ENSG00000162929.9 | 2.129E-8 | 0 | 167543 | gtex_brain_putamen_basal |
| rs7588041 | 2 | 61461412 | KIAA1841 | ENSG00000162929.9 | 2.156E-6 | 0 | 168406 | gtex_brain_putamen_basal |
| rs7591772 | 2 | 61462400 | KIAA1841 | ENSG00000162929.9 | 3.285E-8 | 0 | 169394 | gtex_brain_putamen_basal |
| rs4672427 | 2 | 61469250 | KIAA1841 | ENSG00000162929.9 | 1.006E-8 | 0 | 176244 | gtex_brain_putamen_basal |
| rs2167565 | 2 | 61476458 | KIAA1841 | ENSG00000162929.9 | 2.174E-6 | 0 | 183452 | gtex_brain_putamen_basal |
| rs6545850 | 2 | 61495177 | KIAA1841 | ENSG00000162929.9 | 1.541E-8 | 0 | 202171 | gtex_brain_putamen_basal |
| rs4599092 | 2 | 61498968 | KIAA1841 | ENSG00000162929.9 | 1.031E-8 | 0 | 205962 | gtex_brain_putamen_basal |
| rs12713435 | 2 | 61499789 | KIAA1841 | ENSG00000162929.9 | 1.526E-8 | 0 | 206783 | gtex_brain_putamen_basal |
| rs11677775 | 2 | 61503110 | KIAA1841 | ENSG00000162929.9 | 2.002E-8 | 0 | 210104 | gtex_brain_putamen_basal |
| rs11677776 | 2 | 61503113 | KIAA1841 | ENSG00000162929.9 | 1.037E-8 | 0 | 210107 | gtex_brain_putamen_basal |
| rs10169662 | 2 | 61507936 | KIAA1841 | ENSG00000162929.9 | 1.97E-8 | 0 | 214930 | gtex_brain_putamen_basal |
| rs67763106 | 2 | 61510709 | KIAA1841 | ENSG00000162929.9 | 4.768E-8 | 0 | 217703 | gtex_brain_putamen_basal |
| rs4671403 | 2 | 61511452 | KIAA1841 | ENSG00000162929.9 | 1.052E-8 | 0 | 218446 | gtex_brain_putamen_basal |
| rs6545852 | 2 | 61513390 | KIAA1841 | ENSG00000162929.9 | 2.037E-8 | 0 | 220384 | gtex_brain_putamen_basal |
| rs6545853 | 2 | 61513650 | KIAA1841 | ENSG00000162929.9 | 1.055E-8 | 0 | 220644 | gtex_brain_putamen_basal |
| rs7561697 | 2 | 61519165 | KIAA1841 | ENSG00000162929.9 | 2.539E-8 | 0 | 226159 | gtex_brain_putamen_basal |
| rs56835562 | 2 | 61523396 | KIAA1841 | ENSG00000162929.9 | 1.361E-8 | 0 | 230390 | gtex_brain_putamen_basal |
| rs6545855 | 2 | 61532860 | KIAA1841 | ENSG00000162929.9 | 2.663E-8 | 0 | 239854 | gtex_brain_putamen_basal |
| rs2694619 | 2 | 61536901 | KIAA1841 | ENSG00000162929.9 | 2.625E-8 | 0 | 243895 | gtex_brain_putamen_basal |
| rs2694618 | 2 | 61536984 | KIAA1841 | ENSG00000162929.9 | 3.28E-8 | 0 | 243978 | gtex_brain_putamen_basal |
| rs2600664 | 2 | 61539945 | KIAA1841 | ENSG00000162929.9 | 3.81E-7 | 0 | 246939 | gtex_brain_putamen_basal |
| rs3765051 | 2 | 61542350 | KIAA1841 | ENSG00000162929.9 | 2.129E-8 | 0 | 249344 | gtex_brain_putamen_basal |
| rs2600662 | 2 | 61543060 | KIAA1841 | ENSG00000162929.9 | 3.743E-7 | 0 | 250054 | gtex_brain_putamen_basal |
| rs17482440 | 2 | 61548857 | KIAA1841 | ENSG00000162929.9 | 1.339E-7 | 0 | 255851 | gtex_brain_putamen_basal |
| rs2593623 | 2 | 61551588 | KIAA1841 | ENSG00000162929.9 | 1.039E-8 | 0 | 258582 | gtex_brain_putamen_basal |
| rs2593624 | 2 | 61552484 | KIAA1841 | ENSG00000162929.9 | 2.307E-6 | 0 | 259478 | gtex_brain_putamen_basal |
| rs778159 | 2 | 61556744 | KIAA1841 | ENSG00000162929.9 | 2.939E-8 | 0 | 263738 | gtex_brain_putamen_basal |
| rs921152 | 2 | 61563275 | KIAA1841 | ENSG00000162929.9 | 3.178E-6 | 0 | 270269 | gtex_brain_putamen_basal |
| rs34668697 | 2 | 61568349 | KIAA1841 | ENSG00000162929.9 | 2.907E-8 | 0 | 275343 | gtex_brain_putamen_basal |
| rs12617371 | 2 | 61569134 | KIAA1841 | ENSG00000162929.9 | 3.022E-8 | 0 | 276128 | gtex_brain_putamen_basal |
| rs2442025 | 2 | 61571445 | KIAA1841 | ENSG00000162929.9 | 8.268E-8 | 0 | 278439 | gtex_brain_putamen_basal |
| rs2593631 | 2 | 61572286 | KIAA1841 | ENSG00000162929.9 | 3.001E-7 | 0 | 279280 | gtex_brain_putamen_basal |
| rs2593628 | 2 | 61573287 | KIAA1841 | ENSG00000162929.9 | 2.885E-8 | 0 | 280281 | gtex_brain_putamen_basal |
| rs2463101 | 2 | 61574422 | KIAA1841 | ENSG00000162929.9 | 1.1E-8 | 0 | 281416 | gtex_brain_putamen_basal |
| rs811871 | 2 | 61577949 | KIAA1841 | ENSG00000162929.9 | 2.848E-8 | 0 | 284943 | gtex_brain_putamen_basal |
| rs4411680 | 2 | 61584105 | KIAA1841 | ENSG00000162929.9 | 1.082E-8 | 0 | 291099 | gtex_brain_putamen_basal |
| rs12478192 | 2 | 61591175 | KIAA1841 | ENSG00000162929.9 | 2.89E-8 | 0 | 298169 | gtex_brain_putamen_basal |
| rs12992614 | 2 | 61593076 | KIAA1841 | ENSG00000162929.9 | 2.875E-8 | 0 | 300070 | gtex_brain_putamen_basal |
| rs10177225 | 2 | 61594498 | KIAA1841 | ENSG00000162929.9 | 1.263E-7 | 0 | 301492 | gtex_brain_putamen_basal |
| rs2421066 | 2 | 61599522 | KIAA1841 | ENSG00000162929.9 | 1.745E-8 | 0 | 306516 | gtex_brain_putamen_basal |
| rs10165349 | 2 | 61601073 | KIAA1841 | ENSG00000162929.9 | 2.798E-8 | 0 | 308067 | gtex_brain_putamen_basal |
| rs62149712 | 2 | 61601272 | KIAA1841 | ENSG00000162929.9 | 3.59E-7 | 0 | 308266 | gtex_brain_putamen_basal |
| rs71405108 | 2 | 61601291 | KIAA1841 | ENSG00000162929.9 | 9.532E-7 | 0 | 308285 | gtex_brain_putamen_basal |
| rs67998522 | 2 | 61601314 | KIAA1841 | ENSG00000162929.9 | 2.864E-8 | 0 | 308308 | gtex_brain_putamen_basal |
| rs10196146 | 2 | 61605379 | KIAA1841 | ENSG00000162929.9 | 9.799E-9 | 0 | 312373 | gtex_brain_putamen_basal |
| rs10208769 | 2 | 61605614 | KIAA1841 | ENSG00000162929.9 | 5.748E-8 | 0 | 312608 | gtex_brain_putamen_basal |
| rs778146 | 2 | 61606475 | KIAA1841 | ENSG00000162929.9 | 7.904E-9 | 0 | 313469 | gtex_brain_putamen_basal |
| rs778147 | 2 | 61606566 | KIAA1841 | ENSG00000162929.9 | 4.269E-7 | 0 | 313560 | gtex_brain_putamen_basal |
| rs778149 | 2 | 61608349 | KIAA1841 | ENSG00000162929.9 | 1.389E-6 | 0 | 315343 | gtex_brain_putamen_basal |
| rs778150 | 2 | 61608372 | KIAA1841 | ENSG00000162929.9 | 1.162E-7 | 0 | 315366 | gtex_brain_putamen_basal |
| rs778151 | 2 | 61608420 | KIAA1841 | ENSG00000162929.9 | 3.48E-6 | 0 | 315414 | gtex_brain_putamen_basal |
| rs142410091 | 2 | 61608420 | KIAA1841 | ENSG00000162929.9 | 2.559E-8 | 0 | 315414 | gtex_brain_putamen_basal |
| rs778153 | 2 | 61608652 | KIAA1841 | ENSG00000162929.9 | 1.057E-8 | 0 | 315646 | gtex_brain_putamen_basal |
| rs2593620 | 2 | 61613261 | KIAA1841 | ENSG00000162929.9 | 4.242E-9 | 0 | 320255 | gtex_brain_putamen_basal |
| rs2463097 | 2 | 61614301 | KIAA1841 | ENSG00000162929.9 | 1.075E-8 | 0 | 321295 | gtex_brain_putamen_basal |
| rs4672440 | 2 | 61616653 | KIAA1841 | ENSG00000162929.9 | 1.459E-6 | 0 | 323647 | gtex_brain_putamen_basal |
| rs2463099 | 2 | 61618311 | KIAA1841 | ENSG00000162929.9 | 1.074E-8 | 0 | 325305 | gtex_brain_putamen_basal |
| rs10865324 | 2 | 61621307 | KIAA1841 | ENSG00000162929.9 | 1.085E-8 | 0 | 328301 | gtex_brain_putamen_basal |
| rs10211654 | 2 | 61622658 | KIAA1841 | ENSG00000162929.9 | 9.145E-9 | 0 | 329652 | gtex_brain_putamen_basal |
| rs6708277 | 2 | 61624840 | KIAA1841 | ENSG00000162929.9 | 1.074E-8 | 0 | 331834 | gtex_brain_putamen_basal |
| rs2922089 | 2 | 61625129 | KIAA1841 | ENSG00000162929.9 | 1.074E-8 | 0 | 332123 | gtex_brain_putamen_basal |
| rs2694627 | 2 | 61625506 | KIAA1841 | ENSG00000162929.9 | 1.276E-8 | 0 | 332500 | gtex_brain_putamen_basal |
| rs34104056 | 2 | 61626962 | KIAA1841 | ENSG00000162929.9 | 4.235E-9 | 0 | 333956 | gtex_brain_putamen_basal |
| rs10199672 | 2 | 61627634 | KIAA1841 | ENSG00000162929.9 | 1.118E-8 | 0 | 334628 | gtex_brain_putamen_basal |
| rs2694638 | 2 | 61635363 | KIAA1841 | ENSG00000162929.9 | 1.577E-8 | 0 | 342357 | gtex_brain_putamen_basal |
| rs4672441 | 2 | 61638952 | KIAA1841 | ENSG00000162929.9 | 1.367E-7 | 0 | 345946 | gtex_brain_putamen_basal |
| rs35491595 | 2 | 61639421 | KIAA1841 | ENSG00000162929.9 | 3.25E-9 | 0 | 346415 | gtex_brain_putamen_basal |
| rs2442037 | 2 | 61640291 | KIAA1841 | ENSG00000162929.9 | 2.023E-9 | 0 | 347285 | gtex_brain_putamen_basal |
| rs13028833 | 2 | 61644329 | KIAA1841 | ENSG00000162929.9 | 8.334E-9 | 0 | 351323 | gtex_brain_putamen_basal |
| rs7587389 | 2 | 61649791 | KIAA1841 | ENSG00000162929.9 | 7.269E-9 | 0 | 356785 | gtex_brain_putamen_basal |
| rs200051449 | 2 | 61651936 | KIAA1841 | ENSG00000162929.9 | 2.063E-8 | 0 | 358930 | gtex_brain_putamen_basal |
| rs2950269 | 2 | 61651937 | KIAA1841 | ENSG00000162929.9 | 1.38E-8 | 0 | 358931 | gtex_brain_putamen_basal |
| rs2922088 | 2 | 61651938 | KIAA1841 | ENSG00000162929.9 | 1.379E-8 | 0 | 358932 | gtex_brain_putamen_basal |
| rs2084318 | 2 | 61652601 | KIAA1841 | ENSG00000162929.9 | 1.015E-8 | 0 | 359595 | gtex_brain_putamen_basal |
| rs2421196 | 2 | 61654256 | KIAA1841 | ENSG00000162929.9 | 4.899E-8 | 0 | 361250 | gtex_brain_putamen_basal |
| rs6545868 | 2 | 61655365 | KIAA1841 | ENSG00000162929.9 | 1.335E-8 | 0 | 362359 | gtex_brain_putamen_basal |
| rs967968 | 2 | 61656056 | KIAA1841 | ENSG00000162929.9 | 2.311E-8 | 0 | 363050 | gtex_brain_putamen_basal |
| rs2053750 | 2 | 61656273 | KIAA1841 | ENSG00000162929.9 | 1.672E-8 | 0 | 363267 | gtex_brain_putamen_basal |
| rs2694616 | 2 | 61657003 | KIAA1841 | ENSG00000162929.9 | 1.512E-7 | 0 | 363997 | gtex_brain_putamen_basal |
| rs1186696 | 2 | 61660483 | KIAA1841 | ENSG00000162929.9 | 2.639E-8 | 0 | 367477 | gtex_brain_putamen_basal |
| rs2441378 | 2 | 61672537 | KIAA1841 | ENSG00000162929.9 | 3.482E-8 | 0 | 379531 | gtex_brain_putamen_basal |
| rs1186706 | 2 | 61673394 | KIAA1841 | ENSG00000162929.9 | 3.555E-8 | 0 | 380388 | gtex_brain_putamen_basal |
| rs70963431 | 2 | 61676287 | KIAA1841 | ENSG00000162929.9 | 3.804E-8 | 0 | 383281 | gtex_brain_putamen_basal |
| rs2442035 | 2 | 61679086 | KIAA1841 | ENSG00000162929.9 | 4.419E-7 | 0 | 386080 | gtex_brain_putamen_basal |
| rs2442030 | 2 | 61679520 | KIAA1841 | ENSG00000162929.9 | 1.168E-7 | 0 | 386514 | gtex_brain_putamen_basal |
| rs778139 | 2 | 61684564 | KIAA1841 | ENSG00000162929.9 | 2.393E-7 | 0 | 391558 | gtex_brain_putamen_basal |
| rs7584500 | 2 | 61692115 | KIAA1841 | ENSG00000162929.9 | 1.964E-7 | 0 | 399109 | gtex_brain_putamen_basal |
| rs1867838 | 2 | 61694831 | KIAA1841 | ENSG00000162929.9 | 5.05E-8 | 0 | 401825 | gtex_brain_putamen_basal |
| rs12616433 | 2 | 61696488 | KIAA1841 | ENSG00000162929.9 | 4.533E-8 | 0 | 403482 | gtex_brain_putamen_basal |
| rs2421200 | 2 | 61711815 | KIAA1841 | ENSG00000162929.9 | 7.026E-9 | 0 | 418809 | gtex_brain_putamen_basal |
| rs35844473 | 2 | 61713209 | KIAA1841 | ENSG00000162929.9 | 3.98E-8 | 0 | 420203 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| PYEON HPV POSITIVE TUMORS UP | 98 | 47 | All SZGR 2.0 genes in this pathway |
| WAMUNYOKOLI OVARIAN CANCER GRADES 1 2 UP | 137 | 84 | All SZGR 2.0 genes in this pathway |
| MARTORIATI MDM4 TARGETS NEUROEPITHELIUM DN | 164 | 111 | All SZGR 2.0 genes in this pathway |
| GEORGES TARGETS OF MIR192 AND MIR215 | 893 | 528 | All SZGR 2.0 genes in this pathway |
| KRIGE RESPONSE TO TOSEDOSTAT 6HR DN | 911 | 527 | All SZGR 2.0 genes in this pathway |
| KRIGE RESPONSE TO TOSEDOSTAT 24HR UP | 783 | 442 | All SZGR 2.0 genes in this pathway |
| CREIGHTON ENDOCRINE THERAPY RESISTANCE 2 | 473 | 224 | All SZGR 2.0 genes in this pathway |
| GAVIN FOXP3 TARGETS CLUSTER P2 | 79 | 55 | All SZGR 2.0 genes in this pathway |
| MILI PSEUDOPODIA HAPTOTAXIS UP | 518 | 299 | All SZGR 2.0 genes in this pathway |
| CHICAS RB1 TARGETS SENESCENT | 572 | 352 | All SZGR 2.0 genes in this pathway |
| KUMAR PATHOGEN LOAD BY MACROPHAGES | 275 | 155 | All SZGR 2.0 genes in this pathway |