Gene Page: ITGB1

Summary
GeneID  3688
Symbol  ITGB1
Synonyms  CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB
Description  integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
See related  HGNC:6153|MIM:135630|Ensembl:ENSG00000150093|HPRD:00628|
Locus tag  -
Gene type  protein-coding
Map location  10p11.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.0109 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0004872receptor activityIEA-
GO:0005178integrin bindingIEA-
GO:0005488bindingIEA-
GO:0005515protein bindingIEA-
GO:0042802identical protein bindingIPI14681217 
GO:0046982protein heterodimerization activityNAS9552005 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0000082G1/S transition of mitotic cell cycleIEA-
GO:0001701in utero embryonic developmentIEA-
GO:0007160cell-matrix adhesionIEA-
GO:0007155cell adhesionIEA-
GO:0007156homophilic cell adhesionTAS10201960 
GO:0007229integrin-mediated signaling pathwayIEA-
GO:0006968cellular defense responseTAS10201960 
GO:0008284positive regulation of cell proliferationIEA-
GO:0010002cardioblast differentiationIEA-
GO:0007159leukocyte adhesionIDA1715889 
GO:0016477cell migrationTAS11919189 
GO:0042685cardioblast cell fate specificationIEA-
GO:0030183B cell differentiationIC1715889 
GO:0044419interspecies interaction between organismsIEA-
GO:0045596negative regulation of cell differentiationIEA-
GO:0045214sarcomere organizationIEA-
GO:0051726regulation of cell cycleIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0031594neuromuscular junctionIDAneuron, axon, Synap, Neurotransmitter (GO term level: 3)9415431 
GO:0031594neuromuscular junctionIEAneuron, axon, Synap, Neurotransmitter (GO term level: 3)-
GO:0019717synaptosomeIEASynap, Brain (GO term level: 7)-
GO:0001726ruffleTAS11919189 
GO:0005783endoplasmic reticulumIDA11256614 
GO:0016021integral to membraneIEA-
GO:0009986cell surfaceIDA1715889 
GO:0008305integrin complexIEA-
GO:0008305integrin complexNAS9552005 
GO:0042383sarcolemmaIDA9415431 
GO:0042383sarcolemmaIEA-
GO:0042470melanosomeIEA-
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ACTN1FLJ40884actinin, alpha 1Reconstituted ComplexBioGRID2116421 
ACTN4ACTININ-4 | DKFZp686K23158 | FSGS | FSGS1actinin, alpha 4-HPRD2116421 
ARHGAP5GFI2 | RhoGAP5 | p190-BRho GTPase activating protein 5-HPRD8537347 
CANXCNX | FLJ26570 | IP90 | P90calnexin-HPRD,BioGRID8163531 
CD151GP27 | MER2 | PETA-3 | RAPH | SFA1 | TSPAN24CD151 molecule (Raph blood group)Affinity Capture-WesternBioGRID12175627 
CD36CHDS7 | FAT | GP3B | GP4 | GPIV | PASIV | SCARB3CD36 molecule (thrombospondin receptor)Affinity Capture-WesternBioGRID11238109 
CD46MCP | MGC26544 | MIC10 | TLX | TRA2.10CD46 molecule, complement regulatory protein-HPRD,BioGRID10741407 
CD47IAP | MER6 | OA3CD47 moleculeAffinity Capture-WesternBioGRID10397731 
CD63LAMP-3 | ME491 | MLA1 | OMA81H | TSPAN30CD63 moleculeAffinity Capture-WesternBioGRID12175627 
CD81S5.7 | TAPA1 | TSPAN28CD81 molecule-HPRD,BioGRID10229664 
CD824F9 | C33 | GR15 | IA4 | KAI1 | R2 | SAR2 | ST6 | TSPAN27CD82 molecule-HPRD8757325 
CD95H9 | BA2 | BTCC-1 | DRAP-27 | GIG2 | MIC3 | MRP-1 | P24 | TSPAN29CD9 moleculeAffinity Capture-WesternBioGRID8630057 |12175627 
COL1A1OI4collagen, type I, alpha 1Co-purificationBioGRID2156854 
FBXO2FBG1 | FBX2 | Fbs1 | NFB42F-box protein 2-HPRD,BioGRID12140560 
FHL2AAG11 | DRAL | SLIM3four and a half LIM domains 2Affinity Capture-Western
Two-hybrid		BioGRID10906324 
FLNAABP-280 | ABPX | DKFZp434P031 | FLN | FLN1 | FMD | MNS | NHBP | OPD | OPD1 | OPD2filamin A, alpha (actin binding protein 280)-HPRD,BioGRID9722563 |11807098 
FLNBABP-278 | AOI | DKFZp686A1668 | DKFZp686O033 | FH1 | FLN1L | LRS1 | SCT | TABP | TAPfilamin B, beta (actin binding protein 278)-HPRD,BioGRID11807098 
FLT4FLT41 | LMPH1A | PCL | VEGFR3fms-related tyrosine kinase 4-HPRD,BioGRID11553610 
GNB2L1Gnb2-rs1 | H12.3 | HLC-7 | PIG21 | RACK1guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1beta-1 integrin interacts with RACK1.BIND11884618 
-HPRD,BioGRID9442085 
An unspecified isoform of integrin-beta-1 interacts with RACK1.BIND15611085 
HSPG2PLC | PRCAN | SJA | SJS | SJS1heparan sulfate proteoglycan 2-HPRD9431988 
ICAM4CD242 | LWintercellular adhesion molecule 4 (Landsteiner-Wiener blood group)-HPRD11435317 
IGF1RCD221 | IGFIR | JTK13 | MGC142170 | MGC142172 | MGC18216insulin-like growth factor 1 receptorbeta-1 integrin interacts with IGF-IR.BIND11884618 
ILKDKFZp686F1765 | P59integrin-linked kinaseIntegrin-beta-1 interacts with ILK.BIND8538749 
-HPRD,BioGRID8538749 |9736715 
ITGA1CD49a | VLA1integrin, alpha 1-HPRD8428973 
VLA1-alpha1 interacts with VLA1-beta.BIND1690718 |1693624 
|3546305 
ITGA10PRO827integrin, alpha 10-HPRD,BioGRID9685391 
ITGA11HsT18964integrin, alpha 11Integrin-alpha11 interacts with Integrin-beta1.BIND10464311 
-HPRD10486209 
ITGA2BR | CD49B | GPIa | VLA-2 | VLAA2integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)VLA2-alpha2 interacts with VLA2-beta.BIND1690718 |1693624 
|3546305 
ITGA3CD49C | FLJ34631 | FLJ34704 | GAP-B3 | GAPB3 | MSK18 | VCA-2 | VL3A | VLA3aintegrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)VLA3-alpha3 interacts with VLA3-beta.BIND1690718 |1693624 
|3546305 
VLA3-alpha3 interacts with VLA3-betaBIND3546305 
-HPRD,BioGRID15254262 
ITGA4CD49D | IA4 | MGC90518integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)VLA4-alpha4 interacts with VLA4-beta.BIND1693624 |3546305 
ITGA5CD49e | FNRA | VLA5Aintegrin, alpha 5 (fibronectin receptor, alpha polypeptide)VLA5-alpha5 interacts with VLA5-beta.BIND1690718 |1693624 
|3546305 
ITGA6CD49f | DKFZp686J01244 | FLJ18737 | ITGA6B | VLA-6integrin, alpha 6Affinity Capture-WesternBioGRID9660880 
-HPRD9425259 
VLA6-alpha6 interacts with VLA-beta1.BIND1690718 |1693624 
|2138612 |2649503 
|2967289 
ITGA8-integrin, alpha 8-HPRD,BioGRID7768999 
Integrin-alpha8 interacts with Integrin-beta1.BIND7559467 
ITGA9ALPHA-RLC | ITGA4L | RLCintegrin, alpha 9Integrin-alpha9 interacts with Integrin-beta1.BIND8798654 
-HPRD,BioGRID8245132|11462216 
ITGAVCD51 | DKFZp686A08142 | MSK8 | VNRAintegrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)Integrin-alphaV interacts with Integrin-beta1BIND1690718 |2138612 
ITGB1BP1DKFZp686K08158 | ICAP-1A | ICAP-1B | ICAP-1alpha | ICAP1 | ICAP1A | ICAP1Bintegrin beta 1 binding protein 1-HPRD,BioGRID9281591 |11741908 
ITGB1BP2CHORDC3 | ITGB1BP | MELUSIN | MGC119214 | MSTP015integrin beta 1 binding protein (melusin) 2-HPRD12514714 
ITGB1BP3MGC126624 | MIBP | NRK2integrin beta 1 binding protein 3-HPRD10613898 
ITGB5FLJ26658integrin, beta 5-HPRD11462216 
LAMA1LAMAlaminin, alpha 1-HPRD,BioGRID9688542 
LGALS3BP90K | BTBD17B | MAC-2-BPlectin, galactoside-binding, soluble, 3 binding protein-HPRD9501082 
LGALS8Gal-8 | PCTA-1 | PCTA1 | Po66-CBPlectin, galactoside-binding, soluble, 8Affinity Capture-Western
Reconstituted Complex		BioGRID10852818 
MAP4K4FLH21957 | FLJ10410 | FLJ20373 | FLJ90111 | HGK | KIAA0687 | NIKmitogen-activated protein kinase kinase kinase kinase 4-HPRD,BioGRID11967148 
MYO10FLJ10639 | FLJ21066 | FLJ22268 | FLJ43256 | KIAA0799 | MGC131988myosin XIntegrin-beta-1 interacts with Myo10. This interaction was modeled on a demonstrated interaction between human integrin-beta-1 and bovine Myo10.BIND15156152 
NME1AWD | GAAD | NB | NBS | NDPK-A | NDPKA | NM23 | NM23-H1non-metastatic cells 1, protein (NM23A) expressed in-HPRD,BioGRID11919189 
PRKCAAAG6 | MGC129900 | MGC129901 | PKC-alpha | PKCA | PRKACAprotein kinase C, alpha-HPRD,BioGRID12138200 
PTK2FADK | FAK | FAK1 | pp125FAKPTK2 protein tyrosine kinase 2-HPRD8649427 
PXNFLJ16691paxillin-HPRD,BioGRID7657702|10804218 
RAB8BFLJ38125RAB8B, member RAS oncogene familyAffinity Capture-WesternBioGRID12639940 
SLC3A24F2 | 4F2HC | 4T2HC | CD98 | CD98HC | MDU1 | NACAEsolute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2-HPRD,BioGRID12181350 
TGOLN2MGC14722 | TGN38 | TGN46 | TGN48 | TGN51 | TTGN2trans-golgi network protein 2-HPRD,BioGRID11208159 
THBS1THBS | TSP | TSP1thrombospondin 1-HPRD11980922 
TLN1ILWEQ | KIAA1027 | TLNtalin 1-HPRD,BioGRID11279249 
TSPAN4NAG-2 | NAG2 | TETRASPAN | TM4SF7 | TSPAN-4tetraspanin 4-HPRD,BioGRID9360996 |10734060 
VCAM1CD106 | DKFZp779G2333 | INCAM-100 | MGC99561vascular cell adhesion molecule 1-HPRD12097820 
VCANCSPG2 | DKFZp686K06110 | ERVR | PG-M | WGN | WGN1versican-HPRD,BioGRID11805102 
YWHABGW128 | HS1 | KCIP-1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide-HPRD,BioGRID11313964 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
KEGG_AXON_GUIDANCE 129103All SZGR genes in this pathway
KEGG_FOCAL_ADHESION 201138All SZGR genes in this pathway
KEGG_ECM_RECEPTOR_INTERACTION 8453All SZGR genes in this pathway
KEGG_CELL_ADHESION_MOLECULES_CAMS 13493All SZGR genes in this pathway
KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION 11878All SZGR genes in this pathway
KEGG_REGULATION_OF_ACTIN_CYTOSKELETON 216144All SZGR genes in this pathway
KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION 5936All SZGR genes in this pathway
KEGG_LEISHMANIA_INFECTION 7256All SZGR genes in this pathway
KEGG_PATHWAYS_IN_CANCER 328259All SZGR genes in this pathway
KEGG_SMALL_CELL_LUNG_CANCER 8467All SZGR genes in this pathway
KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM 8565All SZGR genes in this pathway
KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC 7659All SZGR genes in this pathway
KEGG_DILATED_CARDIOMYOPATHY 9268All SZGR genes in this pathway
BIOCARTA_LYM_PATHWAY 116All SZGR genes in this pathway
BIOCARTA_AGR_PATHWAY 3631All SZGR genes in this pathway
BIOCARTA_SPPA_PATHWAY 2218All SZGR genes in this pathway
BIOCARTA_BCELLSURVIVAL_PATHWAY 1610All SZGR genes in this pathway
BIOCARTA_LAIR_PATHWAY 1712All SZGR genes in this pathway
BIOCARTA_EPHA4_PATHWAY 108All SZGR genes in this pathway
BIOCARTA_ECM_PATHWAY 2417All SZGR genes in this pathway
BIOCARTA_ERK_PATHWAY 2822All SZGR genes in this pathway
BIOCARTA_INTEGRIN_PATHWAY 3829All SZGR genes in this pathway
BIOCARTA_MCALPAIN_PATHWAY 2516All SZGR genes in this pathway
BIOCARTA_MONOCYTE_PATHWAY 115All SZGR genes in this pathway
BIOCARTA_PTEN_PATHWAY 1814All SZGR genes in this pathway
BIOCARTA_NKCELLS_PATHWAY 2013All SZGR genes in this pathway
BIOCARTA_MET_PATHWAY 3730All SZGR genes in this pathway
BIOCARTA_TFF_PATHWAY 2115All SZGR genes in this pathway
BIOCARTA_UCALPAIN_PATHWAY 1811All SZGR genes in this pathway
PID_PRL_SIGNALING_EVENTS_PATHWAY 2317All SZGR genes in this pathway
PID_RHOA_PATHWAY 4533All SZGR genes in this pathway
PID_INTEGRIN1_PATHWAY 6644All SZGR genes in this pathway
PID_INTEGRIN_CS_PATHWAY 2616All SZGR genes in this pathway
PID_ARF6_TRAFFICKING_PATHWAY 4934All SZGR genes in this pathway
PID_REELIN_PATHWAY 2929All SZGR genes in this pathway
PID_TCPTP_PATHWAY 4333All SZGR genes in this pathway
PID_ANGIOPOIETIN_RECEPTOR_PATHWAY 5041All SZGR genes in this pathway
PID_INTEGRIN_A9B1_PATHWAY 2518All SZGR genes in this pathway
PID_CXCR4_PATHWAY 10278All SZGR genes in this pathway
PID_SYNDECAN_4_PATHWAY 3225All SZGR genes in this pathway
PID_UPA_UPAR_PATHWAY 4230All SZGR genes in this pathway
PID_A6B1_A6B4_INTEGRIN_PATHWAY 4635All SZGR genes in this pathway
PID_SYNDECAN_2_PATHWAY 3327All SZGR genes in this pathway
PID_MYC_REPRESS_PATHWAY 6352All SZGR genes in this pathway
PID_LYMPH_ANGIOGENESIS_PATHWAY 2516All SZGR genes in this pathway
PID_INTEGRIN_A4B1_PATHWAY 3324All SZGR genes in this pathway
PID_FAK_PATHWAY 5945All SZGR genes in this pathway
REACTOME_DEVELOPMENTAL_BIOLOGY 396292All SZGR genes in this pathway
REACTOME_CELL_CELL_COMMUNICATION 12077All SZGR genes in this pathway
REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL 7037All SZGR genes in this pathway
REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL 9165All SZGR genes in this pathway
REACTOME_PLATELET_ADHESION_TO_EXPOSED_COLLAGEN 128All SZGR genes in this pathway
REACTOME_BASIGIN_INTERACTIONS 3023All SZGR genes in this pathway
REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS 7948All SZGR genes in this pathway
REACTOME_AXON_GUIDANCE 251188All SZGR genes in this pathway
REACTOME_OTHER_SEMAPHORIN_INTERACTIONS 1514All SZGR genes in this pathway
REACTOME_SEMAPHORIN_INTERACTIONS 6853All SZGR genes in this pathway
REACTOME_CELL_EXTRACELLULAR_MATRIX_INTERACTIONS 1410All SZGR genes in this pathway
REACTOME_CELL_JUNCTION_ORGANIZATION 7843All SZGR genes in this pathway
REACTOME_L1CAM_INTERACTIONS 8662All SZGR genes in this pathway
REACTOME_SIGNAL_TRANSDUCTION_BY_L1 3425All SZGR genes in this pathway
REACTOME_HEMOSTASIS 466331All SZGR genes in this pathway
REACTOME_IMMUNE_SYSTEM 933616All SZGR genes in this pathway
REACTOME_ADAPTIVE_IMMUNE_SYSTEM 539350All SZGR genes in this pathway
WATANABE_RECTAL_CANCER_RADIOTHERAPY_RESPONSIVE_DN 9251All SZGR genes in this pathway
HOLLMANN_APOPTOSIS_VIA_CD40_UP 201125All SZGR genes in this pathway
THUM_SYSTOLIC_HEART_FAILURE_UP 423283All SZGR genes in this pathway
CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN 455304All SZGR genes in this pathway
AKL_HTLV1_INFECTION_DN 6841All SZGR genes in this pathway
SENESE_HDAC1_TARGETS_UP 457269All SZGR genes in this pathway
SENESE_HDAC1_AND_HDAC2_TARGETS_UP 238144All SZGR genes in this pathway
SENESE_HDAC2_TARGETS_UP 11466All SZGR genes in this pathway
SENESE_HDAC3_TARGETS_UP 501327All SZGR genes in this pathway
KIM_WT1_TARGETS_DN 459276All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP 633376All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP 722443All SZGR genes in this pathway
HAMAI_APOPTOSIS_VIA_TRAIL_UP 584356All SZGR genes in this pathway
HUMMERICH_SKIN_CANCER_PROGRESSION_UP 8858All SZGR genes in this pathway
SASAKI_TARGETS_OF_TP73_AND_TP63 117All SZGR genes in this pathway
NUYTTEN_EZH2_TARGETS_DN 1024594All SZGR genes in this pathway
LIU_BREAST_CANCER 3019All SZGR genes in this pathway
GUENTHER_GROWTH_SPHERICAL_VS_ADHERENT_DN 2619All SZGR genes in this pathway
SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN 514330All SZGR genes in this pathway
GOTZMANN_EPITHELIAL_TO_MESENCHYMAL_TRANSITION_UP 6955All SZGR genes in this pathway
HE_PTEN_TARGETS_UP 1615All SZGR genes in this pathway
BENPORATH_NANOG_TARGETS 988594All SZGR genes in this pathway
BENPORATH_MYC_TARGETS_WITH_EBOX 230156All SZGR genes in this pathway
GEORGES_TARGETS_OF_MIR192_AND_MIR215 893528All SZGR genes in this pathway
TARTE_PLASMA_CELL_VS_PLASMABLAST_DN 309206All SZGR genes in this pathway
FERNANDEZ_BOUND_BY_MYC 182116All SZGR genes in this pathway
FLECHNER_PBL_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP 151100All SZGR genes in this pathway
FLECHNER_PBL_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN 5135All SZGR genes in this pathway
MATSUDA_NATURAL_KILLER_DIFFERENTIATION 475313All SZGR genes in this pathway
IGLESIAS_E2F_TARGETS_UP 151103All SZGR genes in this pathway
ZHOU_TNF_SIGNALING_4HR 5436All SZGR genes in this pathway
RAMALHO_STEMNESS_UP 206118All SZGR genes in this pathway
CUI_TCF21_TARGETS_2_DN 830547All SZGR genes in this pathway
YAMAZAKI_TCEB3_TARGETS_UP 175116All SZGR genes in this pathway
ZHANG_PROLIFERATING_VS_QUIESCENT 5141All SZGR genes in this pathway
GERHOLD_ADIPOGENESIS_DN 6444All SZGR genes in this pathway
LU_AGING_BRAIN_UP 262186All SZGR genes in this pathway
HENDRICKS_SMARCA4_TARGETS_DN 5334All SZGR genes in this pathway
SESTO_RESPONSE_TO_UV_C7 6844All SZGR genes in this pathway
DURCHDEWALD_SKIN_CARCINOGENESIS_DN 264168All SZGR genes in this pathway
GAVIN_FOXP3_TARGETS_CLUSTER_T4 9469All SZGR genes in this pathway
KYNG_DNA_DAMAGE_BY_4NQO_OR_UV 6344All SZGR genes in this pathway
KYNG_DNA_DAMAGE_DN 195135All SZGR genes in this pathway
AMUNDSON_POOR_SURVIVAL_AFTER_GAMMA_RADIATION_2G 17196All SZGR genes in this pathway
LABBE_TGFB1_TARGETS_UP 10264All SZGR genes in this pathway
LABBE_TARGETS_OF_TGFB1_AND_WNT3A_UP 11170All SZGR genes in this pathway
QI_PLASMACYTOMA_UP 259185All SZGR genes in this pathway
YAUCH_HEDGEHOG_SIGNALING_PARACRINE_DN 264159All SZGR genes in this pathway
GOLDRATH_ANTIGEN_RESPONSE 346192All SZGR genes in this pathway
MELLMAN_TUT1_TARGETS_DN 4729All SZGR genes in this pathway
HSIAO_HOUSEKEEPING_GENES 389245All SZGR genes in this pathway
MILI_PSEUDOPODIA_CHEMOTAXIS_DN 457302All SZGR genes in this pathway
MILI_PSEUDOPODIA_HAPTOTAXIS_DN 668419All SZGR genes in this pathway
LIU_VAV3_PROSTATE_CARCINOGENESIS_DN 1714All SZGR genes in this pathway
KAPOSI_LIVER_CANCER_MET_UP 1811All SZGR genes in this pathway
DANG_REGULATED_BY_MYC_DN 253192All SZGR genes in this pathway
DANG_MYC_TARGETS_DN 3125All SZGR genes in this pathway
DANG_BOUND_BY_MYC 1103714All SZGR genes in this pathway
GREGORY_SYNTHETIC_LETHAL_WITH_IMATINIB 14583All SZGR genes in this pathway
KANG_AR_TARGETS_DN 1912All SZGR genes in this pathway
PASINI_SUZ12_TARGETS_DN 315215All SZGR genes in this pathway
KOINUMA_TARGETS_OF_SMAD2_OR_SMAD3 824528All SZGR genes in this pathway
PEDERSEN_METASTASIS_BY_ERBB2_ISOFORM_7 403240All SZGR genes in this pathway
PEDERSEN_TARGETS_OF_611CTF_ISOFORM_OF_ERBB2 7645All SZGR genes in this pathway
ABDELMOHSEN_ELAVL4_TARGETS 1613All SZGR genes in this pathway
PECE_MAMMARY_STEM_CELL_DN 14688All SZGR genes in this pathway
KUMAR_PATHOGEN_LOAD_BY_MACROPHAGES 275155All SZGR genes in this pathway
LIM_MAMMARY_STEM_CELL_UP 489314All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-124/50610951101m8hsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
hsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
miR-13452581Ahsa-miR-134brainUGUGACUGGUUGACCAGAGGG
miR-183623629m8hsa-miR-183UAUGGCACUGGUAGAAUUCACUG
miR-2231831891Ahsa-miR-223UGUCAGUUUGUCAAAUACCCC
miR-29830836m8hsa-miR-29aSZUAGCACCAUCUGAAAUCGGUU
hsa-miR-29bSZUAGCACCAUUUGAAAUCAGUGUU
hsa-miR-29cSZUAGCACCAUUUGAAAUCGGU
miR-3206086141Ahsa-miR-320AAAAGCUGGGUUGAGAGGGCGAA
miR-493-5p1151221A,m8hsa-miR-493-5pUUGUACAUGGUAGGCUUUCAUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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