Search results: The pahtway p4205 has 253 genes in the original annotation. Currently, there are 192 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
10730YME1L1FTSH | MEG4 | PAMP | YME1LYME1 like 1 ATPase10p14CV:PGCnp
1791DNTTTDTDNA nucleotidylexotransferase10q23-q24CV:PGCnp
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
355FASALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6Fas cell surface death receptor10q24.1CV:PGCnp
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
1643DDB2DDBB | UV-DDB2 | XPEdamage specific DNA binding protein 211p11.2CV:PGCnp
8525DGKZDAGK5 | DAGK6 | DGK-ZETA | hDGKzetadiacylglycerol kinase zeta11p11.2CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
112464PRKCDBPCAVIN3 | HSRBC | SRBC | cavin-3protein kinase C delta binding protein11p15.4CV:GWASdb
CV:PGCnp
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
3611ILKHEL-S-28 | ILK-1 | ILK-2 | P59 | p59ILKintegrin linked kinase11p15.4CV:PGCnp
Network
3665IRF7IMD39 | IRF-7H | IRF7A | IRF7B | IRF7C | IRF7Hinterferon regulatory factor 711p15.5CV:PGCnp
PMID:cooccur
9415FADS2D6D | DES6 | FADSD6 | LLCDL2 | SLL0262 | TU13fatty acid desaturase 211q12.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
2495FTH1FHC | FTH | FTHL6 | HFE5 | PIG15 | PLIFferritin, heavy polypeptide 111q13CV:PGCnp
PMID:cooccur
CompositeSet
84233TMEM126AOPA7transmembrane protein 126A11q14.1CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
834CASP1ICE | IL1BC | P45caspase 111q23DEG:Sanders_2013
GSMA_I
Network
916CD3EIMD18 | T3E | TCRECD3e molecule11q23CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_I
4684NCAM1CD56 | MSK39 | NCAMneural cell adhesion molecule 111q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7070THY1CD90 | CDw90Thy-1 cell surface antigen11q23.3DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
23187PHLDB1LL5Apleckstrin homology like domain family B member 111q23.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
4033LRMPJAW1lymphoid restricted membrane protein12p12.1CV:PGCnp
4256MGPGIG36 | MGLAP | NTImatrix Gla protein12p12.3PMID:cooccur
8079MLF2NTN4myeloid leukemia factor 212p13CV:PGCnp
DEG:Zhao_2015
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
1027CDKN1BCDKN4 | KIP1 | MEN1B | MEN4 | P27KIP1cyclin-dependent kinase inhibitor 1B12p13.1-p12CV:PGCnp
Network
PMID:cooccur
2A2MA2MD | CPAMD5 | FWP007 | S863-7alpha-2-macroglobulin12p13.31CV:PGCnp
DMG:Wockner_2014
Network
1649DDIT3CEBPZ | CHOP | CHOP-10 | CHOP10 | GADD153DNA damage inducible transcript 312q13.1-q13.2DMG:Jaffe_2016
PMID:cooccur
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
1848DUSP6HH19 | MKP3 | PYST1dual specificity phosphatase 612q21.33CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
23479ISCU2310020H20Rik | HML | ISU2 | NIFU | NIFUN | hnifUiron-sulfur cluster assembly enzyme12q24.1CV:PGCnp
DMG:Jaffe_2016
8803SUCLA2A-BETA | MTDPS5 | SCS-betaAsuccinate-CoA ligase, ADP-forming, beta subunit13q14.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
9445ITM2BABRI | BRI | BRI2 | BRICD2B | E25B | E3-16 | FBD | RDGCA | imBRI2integral membrane protein 2B13q14.3CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
8874ARHGEF7BETA-PIX | COOL-1 | COOL1 | Nbla10314 | P50 | P50BP | P85 | P85COOL1 | P85SPR | PAK3 | PIXBRho guanine nucleotide exchange factor 713q34CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5529PPP2R5E-protein phosphatase 2 regulatory subunit B', epsilon14q23.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
677ZFP36L1BRF1 | Berg36 | ERF-1 | ERF1 | RNF162B | TIS11B | cMG1ZFP36 ring finger protein-like 114q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
10577NPC2EDDM1 | HE1Niemann-Pick disease, type C214q24.3CV:PGCnp
PMID:cooccur
1112FOXN3C14orf116 | CHES1 | PRO1635forkhead box N314q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
207AKT1AKT | CWS6 | PKB | PKB-ALPHA | PRKBA | RAC | RAC-ALPHAv-akt murine thymoma viral oncogene homolog 114q32.32Association
Core
CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Fromer_2014
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
1445CSK-c-src tyrosine kinase15q24.1CV:PGCnp
Network
PMID:cooccur
1464CSPG4HMW-MAA | MCSP | MCSPG | MEL-CSPG | MSK16 | NG2chondroitin sulfate proteoglycan 415q24.2CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
CompositeSet
5595MAPK3ERK-1 | ERK1 | ERT2 | HS44KDAP | HUMKER1A | P44ERK1 | P44MAPK | PRKM3 | p44-ERK1 | p44-MAPKmitogen-activated protein kinase 316p11.2CNV:YES
CV:PGCnp
GSMA_IIE
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
3683ITGALCD11A | LFA-1 | LFA1Aintegrin subunit alpha L16p11.2CV:PGCnp
GO_Annotation
GSMA_IIE
4489MT1AMT1 | MT1S | MTCmetallothionein 1A16q13CV:PGCnp
DMG:Wockner_2014
5376PMP22CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110peripheral myelin protein 2217p12CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
64359NXNNRX | TRG-4nucleoredoxin17p13.3CV:PGCnp
DMG:Wockner_2014
4641MYO1CMMI-beta | MMIb | NMI | myr2myosin IC17p13.3CV:PGCnpAscano FMRP targets
1362CPDGP180carboxypeptidase D17q11.2CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
2064ERBB2CD340 | HER-2 | HER-2/neu | HER2 | MLN 19 | NEU | NGL | TKR1erb-b2 receptor tyrosine kinase 217q12CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Ascano FMRP targets
3430IFI35IFP35interferon induced protein 3517q21CV:PGCnp
1655DDX5G17P1 | HLR1 | HUMP68 | p68DEAD-box helicase 517q21CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
5914RARANR1B1 | RARretinoic acid receptor alpha17q21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4836NMT1NMTN-myristoyltransferase 117q21.31CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
Ascano FMRP targets
6521SLC4A1AE1 | BND3 | CD233 | CHC | DI | EMPB3 | EPB3 | FR | RTA1A | SAO | SPH4 | SW | WD | WD1 | WRsolute carrier family 4 member 1 (Diego blood group)17q21.31CV:PGCnp
Network
ION BALANCE
5414SEPT4ARTS | BRADEION | CE5B3 | H5 | MART | PNUTL2 | SEP4 | hCDCREL-2 | hucep-7septin 417q22CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7077TIMP2CSC-21K | DDC8TIMP metallopeptidase inhibitor 217q25CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
GO_Annotation
Network
PMID:cooccur
2548GAALYAGglucosidase, alpha; acid17q25.2-q25.3PMID:cooccur
5831PYCR1ARCL2B | ARCL3B | P5C | P5CR | PIG45 | PP222 | PRO3 | PYCRpyrroline-5-carboxylate reductase 117q25.3PMID:cooccurG2Cdb.humanPSD
G2Cdb.humanPSP
6093ROCK1P160ROCK | ROCK-IRho associated coiled-coil containing protein kinase 118q11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
1000CDH2CD325 | CDHN | CDw325 | NCADcadherin 218q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Ascano FMRP targets
Potential synaptic genes
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
4125MAN2B1LAMAN | MANBmannosidase alpha class 2B member 119p13.2CV:PGCnp
DMG:Montano_2016
54ACP5HPAP | SPENCDI | TRAPacid phosphatase 5, tartrate resistant19p13.2CV:PGCnp
5329PLAURCD87 | U-PAR | UPAR | URKRplasminogen activator, urokinase receptor19q13CV:PGCnp
PMID:cooccur
7040TGFB1CED | DPD1 | LAP | TGFB | TGFbetatransforming growth factor beta 119q13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
1050CEBPAC/EBP-alpha | CEBPCCAAT/enhancer binding protein alpha19q13.1CV:PGCnp
208AKT2HIHGHH | PKBB | PKBBETA | PRKBB | RAC-BETAv-akt murine thymoma viral oncogene homolog 219q13.1-q13.2CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
2217FCGRTFCRN | alpha-chainFc fragment of IgG receptor and transporter19q13.3CV:PGCnp
2512FTLLFTD | NBIA3ferritin, light polypeptide19q13.33PMID:cooccur
4924NUCB1CALNUC | NUCnucleobindin 119q13.33CV:PGCnp
7812CSDE1D1S155E | UNRcold shock domain containing E11p22CV:PGCnp
GSMA_I
GSMA_IIA
1486CTBSCTBchitobiase1p22CV:PGCnp
PMID:cooccur
2152F3CD142 | TF | TFAcoagulation factor III, tissue factor1p22-p21CV:PGCnp
PMID:cooccur
2634GBP2-guanylate binding protein 21p22.2CV:PGCnp
DEG:Sanders_2013
1647GADD45ADDIT1 | GADD45growth arrest and DNA damage inducible alpha1p31.2CV:GWASdb
CV:PGCnp
GSMA_IIA
10450PPIECYP-33 | CYP33peptidylprolyl isomerase E1p32CV:GWASdb
CV:PGCnp
1996ELAVL4HUD | PNEMELAV like neuron-specific RNA binding protein 41p34CV:PGCnp
PMID:cooccur
54206ERRFI1GENE-33 | MIG-6 | MIG6 | RALTERBB receptor feedback inhibitor 11p36CV:PGCnp
DMG:Nishioka_2013
2810SFNYWHASstratifin1p36.11CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3399ID3HEIR-1 | bHLHb25inhibitor of DNA binding 3, HLH protein1p36.13-p36.12CV:PGCnp
PMID:cooccur
4879NPPBBNPnatriuretic peptide B1p36.2CV:PGCnp
6518SLC2A5GLUT-5 | GLUT5solute carrier family 2 member 51p36.2CV:PGCnp
DMG:Wockner_2014
8682PEA15HMAT1 | HUMMAT1H | MAT1 | MAT1H | PEA-15 | PEDphosphoprotein enriched in astrocytes 151q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
962CD48BCM1 | BLAST | BLAST1 | MEM-102 | SLAMF2 | hCD48 | mCD48CD48 molecule1q21.3-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
223ALDH9A1ALDH4 | ALDH7 | ALDH9 | E3 | TMABADHaldehyde dehydrogenase 9 family member A11q23.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
5824PEX19D1S2223E | HK33 | PBD12A | PMP1 | PMPI | PXF | PXMP1peroxisomal biogenesis factor 191q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
116496FAM129AC1orf24 | GIG39 | NIBANfamily with sequence similarity 129 member A1q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5972RENHNFJ2renin1q32CV:PGCnp
GO_Annotation
PMID:cooccur
5877RABIFMSS4 | RASGFR3 | RASGRF3RAB interacting factor1q32.1DMG:Jaffe_2016INTRACELLULAR TRAFFICKING
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
5770PTPN1PTP1Bprotein tyrosine phosphatase, non-receptor type 120q13.1-q13.2CV:PGCnp
Network
PMID:cooccur
10955SERINC3AIGP1 | DIFF33 | SBBI99 | TDE | TDE1 | TMS-1serine incorporator 320q13.12DMG:Jaffe_2016
7335UBE2V1CIR1 | CROC-1 | CROC1 | UBE2V | UEV-1 | UEV1 | UEV1Aubiquitin conjugating enzyme E2 V120q13.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
2778GNASAHO | C20orf45 | GNAS1 | GPSA | GSA | GSP | NESP | POH | SCG6 | SgVIGNAS complex locus20q13.3Association
CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
DOPAMINE
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
351APPAAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2amyloid beta precursor protein21q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8867SYNJ1INPP5G | PARK20synaptojanin 121q22.2CV:PGCnp
GO_Annotation
Network
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
421ARVCF-armadillo repeat gene deleted in velocardiofacial syndrome22q11.21Association
CNV:YES
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
3162HMOX1HMOX1D | HO-1 | HSP32 | bK286B10heme oxygenase 122q13.1CV:PGCnp
PMID:cooccur
706TSPOBPBS | BZRP | DBI | IBP | MBR | PBR | PBS | PKBS | PTBR | mDRC | pk18translocator protein22q13.31ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
307ANXA4ANX4 | HEL-S-274 | P32.5 | PAP-II | PIG28 | PP4-X | ZAP36annexin A42p13CV:PGCnp
2355FOSL2FRA2FOS like antigen 22p23.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10890RAB10-RAB10, member RAS oncogene family2p23.3CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
91543RSAD22510004L01Rik | cig33 | cig5 | vig1radical S-adenosyl methionine domain containing 22p25.2CV:PGCnp
3987LIMS1PINCH | PINCH-1 | PINCH1LIM zinc finger domain containing 12q12.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
150468CKAP2L-cytoskeleton associated protein 2 like2q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
8708B3GALT1beta3Gal-T1Beta-1,3-galactosyltransferase 12q24.3GSMA_IIA
1281COL3A1EDS4Acollagen type III alpha 12q31CV:PGCnp
DNM:Xu_2012
CompositeSet
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
8609KLF7UKLFKruppel-like factor 7 (ubiquitous)2q32CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
6556SLC11A1LSH | NRAMP | NRAMP1solute carrier family 11 member 12q35CV:GWASdb
GSMA_IIA
GSMA_IIE
2817GPC1glypicanglypican 12q35-q37CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
9320TRIP12TRIP-12 | ULFthyroid hormone receptor interactor 122q36.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
54578UGT1A6GNT1 | HLUGP | HLUGP1 | UDPGT | UDPGT 1-6 | UGT1 | UGT1A6S | UGT1FUDP glucuronosyltransferase family 1 member A62q37CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
54658UGT1A1BILIQTL1 | GNT1 | HUG-BR1 | UDPGT | UDPGT 1-1 | UGT1 | UGT1AUDP glucuronosyltransferase family 1 member A12q37CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6988TCTA-T-cell leukemia translocation altered3p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55830GLT8D1AD-017 | MSTP139glycosyltransferase 8 domain containing 13p21.1CV:GWAScat
CV:GWASdb
CV:PGCnp
LK:YES
PMID:cooccur
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
7428VHLHRCA1 | RCA1 | VHL1 | pVHLvon Hippel-Lindau tumor suppressor3p25.3CV:PGCnp
Network
PMID:cooccur
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
56925LXNECI | TCIlatexin3q25.32DMG:vanEijk_2014
5337PLD1-phospholipase D13q26CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
6514SLC2A2GLUT2solute carrier family 2 member 23q26.2CV:PGCnp
3556IL1RAPC3orf13 | IL-1RAcP | IL1R3interleukin 1 receptor accessory protein3q28CV:PGCnp
Network
PMID:cooccur
5062PAK2PAK65 | PAKgammap21 protein (Cdc42/Rac)-activated kinase 23q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
7466WFS1CTRCT41 | WFRS | WFS | WFSLwolframin ER transmembrane glycoprotein4p16.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
7366UGT2B15HLUG4 | UDPGT 2B8 | UDPGT2B15 | UDPGTH3 | UGT2B8UDP glucuronosyltransferase family 2 member B154q13DMG:Wockner_2014
3627CXCL10C7 | IFI10 | INP10 | IP-10 | SCYB10 | crg-2 | gIP-10 | mob-1C-X-C motif chemokine ligand 104q21CV:PGCnp
PMID:cooccur
6622SNCANACP | PARK1 | PARK4 | PD1synuclein alpha4q21CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
51316PLAC8C15 | DGIC | PNAS-144 | onzinplacenta specific 84q21.22CV:PGCnp
DMG:Jaffe_2016
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
5618PRLRHPRL | MFAB | hPRLrIprolactin receptor5p13.2CV:PGCnp
PMID:cooccur
4214MAP3K1MAPKKK1 | MEKK | MEKK 1 | MEKK1 | SRXY6mitogen-activated protein kinase kinase kinase 15q11.2CV:PGCnp
DMG:Montano_2016
Network
5066PAMPAL | PHMpeptidylglycine alpha-amidating monooxygenase5q14-q21CV:GWASdb
CV:PGCnp
Expression
GR_Ng
PMID:cooccur
9522SCAMP1SCAMP | SCAMP37secretory carrier membrane protein 15q14.1CV:PGCnp
PMID:cooccur
EXOCYTOSIS
6228RPS23S23ribosomal protein S235q14.2CV:PGCnp
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
4163MCCMCC1mutated in colorectal cancers5q21CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
1839HBEGFDTR | DTS | DTSF | HEGFLheparin binding EGF like growth factor5q23CV:PGCnp
GSMA_I
4015LOX-lysyl oxidase5q23.2DMG:Wockner_2014
PMID:cooccur
309ANXA6ANX6 | CBP68annexin A65q33.1CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Ascano FMRP targets
5159PDGFRBCD140B | IBGC4 | IMF1 | JTK12 | KOGS | PDGFR | PDGFR-1 | PDGFR1 | PENTTplatelet derived growth factor receptor beta5q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
26999CYFIP2PIR121cytoplasmic FMR1 interacting protein 25q33.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2566GABRG2CAE2 | ECA2 | GEFSP3gamma-aminobutyric acid type A receptor gamma2 subunit5q34Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
LIGAND GATED ION SIGNALING
821CANXCNX | IP90 | P90calnexin5q35CV:PGCnp
DNM:Xu_2012
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
CompositeSet
3187HNRNPH1HNRPH | HNRPH1 | hnRNPHheterogeneous nuclear ribonucleoprotein H1 (H)5q35.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
9260PDLIM7LMP1 | LMP3PDZ and LIM domain 75q35.3CV:PGCnp
GSMA_IIA
Network
7422VEGFAMVCD1 | VEGF | VPFvascular endothelial growth factor A6p12CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
5292PIM1PIMPim-1 proto-oncogene, serine/threonine kinase6p21.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
629CFBAHUS4 | ARMD14 | BF | BFD | CFAB | CFBD | FB | FBI12 | GBG | H2-Bf | PBF2complement factor B6p21.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
6046BRD2D6S113E | FSH | FSRG1 | NAT | O27.1.1 | RING3 | RNF3bromodomain containing 26p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8870IER3DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1immediate early response 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
11074TRIM31C6orf13 | HCG1 | HCGI | RNFtripartite motif containing 316p21.3CV:GWASdb
CV:PGCnp
GSMA_I
7407VARSG7A | VARS1 | VARS2valyl-tRNA synthetase6p21.3CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
1906EDN1ARCND3 | ET1 | HDLCQ7 | PPET1 | QMEendothelin 16p24.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
3097HIVEP2HIV-EP2 | MBP-2 | MIBP1 | SHN2 | ZAS2 | ZNF40Bhuman immunodeficiency virus type I enhancer binding protein 26q23-q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
6206RPS12S12ribosomal protein S126q23.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
9590AKAP12AKAP250 | SSeCKSA-kinase anchoring protein 126q24-q25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
3482IGF2RCD222 | CI-M6PR | CIMPR | M6P-R | M6P/IGF2R | MPR 300 | MPR1 | MPR300 | MPRIinsulin like growth factor 2 receptor6q26CV:PGCnp
DMG:Montano_2016
PMID:cooccur
Ascano FMRP targets
358AQP1AQP-CHIP | CHIP28 | COaquaporin 1 (Colton blood group)7p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
3624INHBAEDF | FRPinhibin beta A7p15-p13CV:PGCnp
GO_Annotation
9883POM121P145 | POM121APOM121 transmembrane nucleoporin7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
3315HSPB1CMT2F | HEL-S-102 | HMN2B | HS.76067 | HSP27 | HSP28 | Hsp25 | SRP27heat shock protein family B (small) member 17q11.23CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9863MAGI2ACVRIP1 | AIP-1 | AIP1 | ARIP1 | MAGI-2 | SSCAMmembrane associated guanylate kinase, WW and PDZ domain containing 27q21Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
857CAV1BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21caveolin 17q31.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
1508CTSBAPPS | CPSBcathepsin B8p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
6386SDCBPMDA-9 | MDA9 | ST1 | SYCL | TACIP18syndecan binding protein8q12CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
Potential synaptic genes
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
10397NDRG1CAP43 | CMT4D | DRG-1 | DRG1 | GC4 | HMSNL | NDR1 | NMSL | PROXY1 | RIT42 | RTP | TARG1 | TDD5N-myc downstream regulated 18q24.3CV:PGCnp
DEG:Zhao_2015
Network
7436VLDLRCAMRQ1 | CARMQ1 | CHRMQ1 | VLDLRCHvery low density lipoprotein receptor9p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
2619GAS1-growth arrest specific 19q21.3-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5524PPP2R4PP2A | PR53 | PTPAprotein phosphatase 2A regulatory subunit 49q34CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
6709SPTAN1EIEE5 | NEAS | SPTA2spectrin alpha, non-erythrocytic 19q34.11Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
7102TSPAN7A15 | CCG-B7 | CD231 | DXS1692E | MRX58 | MXS1 | TALLA-1 | TM4SF2 | TM4SF2btetraspanin 7Xp11.4CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2824GPM6BM6Bglycoprotein M6BXp22.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Potential synaptic genes
4478MSNHEL70moesinXq11.1GO_Annotation
Network
PMID:cooccur
CompositeSet
Potential synaptic genes
546ATRXATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HXalpha thalassemia/mental retardation syndrome X-linkedXq21.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
5358PLS3BMND18 | T-plastinplastin 3Xq23CV:PGCnp
DMG:Nishioka_2013
2664GDI11A | GDIL | MRX41 | MRX48 | OPHN2 | RABGD1A | RABGDIA | XAP-4GDP dissociation inhibitor 1Xq28CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes