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Gene Page: CAV1

Summary

GeneID

857

Symbol

CAV1

Synonyms

CAV|MSTP085|VIP21

Description

caveolin 1, caveolae protein, 22kDa

Locus tag

Gene type

protein-coding

Map location

7q31.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 1

Network

Shortest path distance of core genes in the Human protein-protein interaction network

Contribution to shortest path in PPI network: 0.5838

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

IL17RA

0.67

0.45

NFATC2

0.64

0.55

LINGO3

0.61

0.29

ADCY5

0.60

0.43

OTOF

0.60

0.39

ITGB2

0.60

0.67

PMEPA1

0.59

0.43

SH3D20

0.59

0.42

ENTPD3

0.59

0.36

GPR52

0.59

0.34

Top 10 negatively co-expressed genes

AL139819.3

-0.28

-0.35

RP9P

-0.27

-0.39

AC120053.1

-0.24

-0.30

SYCP3

-0.24

-0.32

AC010300.1

-0.24

-0.29

NOX1

-0.23

-0.25

AC087071.1

-0.22

-0.20

FAM159B

-0.22

-0.37

AF347015.21

-0.22

-0.23

SPDYA

-0.22

-0.27

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IPI

16951145

GO:0005198

structural molecule activity

IDA

11865038

GO:0016504

protease activator activity

ISS

GO:0015485

cholesterol binding

TAS

11294831

GO:0050998

nitric-oxide synthase binding

IPI

12852865

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007519

skeletal muscle development

ISS

neuron (GO term level: 8)

GO:0000188

inactivation of MAPK activity

ISS

GO:0001570

vasculogenesis

ISS

GO:0001666

response to hypoxia

ISS

GO:0001937

negative regulation of endothelial cell proliferation

ISS

GO:0016050

vesicle organization

IDA

12743374

GO:0052547

regulation of peptidase activity

ISS

GO:0008104

protein localization

ISS

GO:0019915

sequestering of lipid

ISS

GO:0006816

calcium ion transport

ISS

GO:0006940

regulation of smooth muscle contraction

ISS

GO:0006641

triacylglycerol metabolic process

ISS

GO:0006897

endocytosis

ISS

GO:0006874

cellular calcium ion homeostasis

ISS

GO:0030193

regulation of blood coagulation

IMP

17848177

GO:0033484

nitric oxide homeostasis

ISS

GO:0051260

protein homooligomerization

ISS

GO:0030857

negative regulation of epithelial cell differentiation

ISS

GO:0019217

regulation of fatty acid metabolic process

ISS

GO:0030301

cholesterol transport

TAS

11294831

GO:0043409

negative regulation of MAPKKK cascade

ISS

GO:0042632

cholesterol homeostasis

TAS

11294831

GO:0045907

positive regulation of vasoconstriction

ISS

GO:0045908

negative regulation of vasodilation

ISS

GO:0045019

negative regulation of nitric oxide biosynthetic process

ISS

GO:0046426

negative regulation of JAK-STAT cascade

ISS

GO:0048554

positive regulation of metalloenzyme activity

ISS

GO:0060056

mammary gland involution

ISS

GO:0051899

membrane depolarization

ISS

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000139

Golgi membrane

EXP

14707126

GO:0000139

Golgi membrane

IDA

11294831

GO:0000139

Golgi membrane

IEA

GO:0005794

Golgi apparatus

IEA

GO:0005811

lipid particle

EXP

9188442 |9580552 |10781589
|16722822 |16807357

GO:0005783

endoplasmic reticulum

IDA

11294831

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

GO:0005901

caveola

IDA

15219854

GO:0005886

plasma membrane

IEA

GO:0005887

integral to plasma membrane

TAS

1360410

GO:0048471

perinuclear region of cytoplasm

ISS

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ADRBK1	BARK1 \| BETA-ARK1 \| FLJ16718 \| GRK2	adrenergic, beta, receptor kinase 1	Reconstituted Complex	BioGRID	10085129
AKAP1	AKAP \| AKAP121 \| AKAP149 \| AKAP84 \| D-AKAP1 \| MGC1807 \| PRKA1 \| SAKAP84	A kinase (PRKA) anchor protein 1	-	HPRD	11546661
APP	AAA \| ABETA \| ABPP \| AD1 \| APPI \| CTFgamma \| CVAP \| PN2	amyloid beta (A4) precursor protein	-	HPRD,BioGRID	9553108
AQP3	GIL	aquaporin 3 (Gill blood group)	Affinity Capture-Western	BioGRID	14675200
AR	AIS \| DHTR \| HUMARA \| KD \| NR3C4 \| SBMA \| SMAX1 \| TFM	androgen receptor	-	HPRD,BioGRID	11278309
AR	AIS \| DHTR \| HUMARA \| KD \| NR3C4 \| SBMA \| SMAX1 \| TFM	androgen receptor	Caveolin-1 interacts with AR.	BIND	11278309
BMX	ETK \| PSCTK2 \| PSCTK3	BMX non-receptor tyrosine kinase	-	HPRD,BioGRID	11751885
BST1	CD157	bone marrow stromal cell antigen 1	-	HPRD	11866528
BTK	AGMX1 \| AT \| ATK \| BPK \| IMD1 \| MGC126261 \| MGC126262 \| PSCTK1 \| XLA	Bruton agammaglobulinemia tyrosine kinase	-	HPRD,BioGRID	11751885
CAV1	CAV \| MSTP085 \| VIP21	caveolin 1, caveolae protein, 22kDa	CAV1 (caveolin-1) homodimerizes.	BIND	15782218
CAV2	CAV \| MGC12294	caveolin 2	-	HPRD,BioGRID	9361015 \|12414992
CDH1	Arc-1 \| CD324 \| CDHE \| ECAD \| LCAM \| UVO	cadherin 1, type 1, E-cadherin (epithelial)	E-cadherin interacts with caveolin-1.	BIND	14706341
CSK	MGC117393	c-src tyrosine kinase	-	HPRD,BioGRID	11805080
DAG1	156DAG \| A3a \| AGRNR \| DAG	dystroglycan 1 (dystrophin-associated glycoprotein 1)	Reconstituted Complex	BioGRID	11724572
EDNRB	ABCDS \| ETB \| ETBR \| ETRB \| HSCR \| HSCR2	endothelin receptor type B	-	HPRD,BioGRID	12694195
EGFR	ERBB \| ERBB1 \| HER1 \| PIG61 \| mENA	epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)	-	HPRD,BioGRID	9374534
ERBB2	CD340 \| HER-2 \| HER-2/neu \| HER2 \| NEU \| NGL \| TKR1	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	-	HPRD	9685399
ESR1	DKFZp686N23123 \| ER \| ESR \| ESRA \| Era \| NR3A1	estrogen receptor 1	-	HPRD,BioGRID	11563984
FLNA	ABP-280 \| ABPX \| DKFZp434P031 \| FLN \| FLN1 \| FMD \| MNS \| NHBP \| OPD \| OPD1 \| OPD2	filamin A, alpha (actin binding protein 280)	-	HPRD	10637311
FLOT1	-	flotillin 1	Affinity Capture-Western	BioGRID	10212252
FLOT2	ECS-1 \| ECS1 \| ESA \| ESA1 \| M17S1	flotillin 2	-	HPRD,BioGRID	10212252
GJA1	CX43 \| DFNB38 \| GJAL \| ODDD	gap junction protein, alpha 1, 43kDa	-	HPRD,BioGRID	11980479
GJA3	CX46 \| CZP3	gap junction protein, alpha 3, 46kDa	-	HPRD,BioGRID	11980479
GJB2	CX26 \| DFNA3 \| DFNB1 \| HID \| KID \| NSRD1 \| PPK	gap junction protein, beta 2, 26kDa	-	HPRD,BioGRID	11980479
GRK1	GPRK1 \| RHOK \| RK	G protein-coupled receptor kinase 1	Reconstituted Complex	BioGRID	10085129
GRK5	GPRK5	G protein-coupled receptor kinase 5	Reconstituted Complex	BioGRID	10085129
ILK	DKFZp686F1765 \| P59	integrin-linked kinase	ILK1 interacts with caveolin-1.	BIND	15722199
INSR	CD220 \| HHF5	insulin receptor	-	HPRD,BioGRID	10598578
MALL	BENE \| MGC4419	mal, T-cell differentiation protein-like	-	HPRD	1294831
NEU3	FLJ12388 \| SIAL3	sialidase 3 (membrane sialidase)	-	HPRD,BioGRID	12011038
NGFR	CD271 \| Gp80-LNGFR \| TNFRSF16 \| p75(NTR) \| p75NTR	nerve growth factor receptor (TNFR superfamily, member 16)	Reconstituted Complex	BioGRID	9867838
NOS2	HEP-NOS \| INOS \| NOS \| NOS2A	nitric oxide synthase 2, inducible	-	HPRD,BioGRID	11114180
NOS3	ECNOS \| eNOS	nitric oxide synthase 3 (endothelial cell)	-	HPRD,BioGRID	8910295
NTRK1	DKFZp781I14186 \| MTC \| TRK \| TRK1 \| TRKA \| p140-TrkA	neurotrophic tyrosine kinase, receptor, type 1	-	HPRD,BioGRID	9867838
PDGFRA	CD140A \| MGC74795 \| PDGFR2 \| Rhe-PDGFRA	platelet-derived growth factor receptor, alpha polypeptide	Affinity Capture-Western Co-fractionation Reconstituted Complex	BioGRID	10066366
PDGFRB	CD140B \| JTK12 \| PDGF-R-beta \| PDGFR \| PDGFR1	platelet-derived growth factor receptor, beta polypeptide	Affinity Capture-Western Co-fractionation Reconstituted Complex	BioGRID	10066366
PLD2	-	phospholipase D2	-	HPRD,BioGRID	10675563
PPP1CA	MGC15877 \| MGC1674 \| PP-1A \| PPP1A	protein phosphatase 1, catalytic subunit, alpha isoform	CAV1 interacts with PP1-C.	BIND	14645548
PRKACA	MGC102831 \| MGC48865 \| PKACA	protein kinase, cAMP-dependent, catalytic, alpha	Affinity Capture-Western	BioGRID	11546661
PRNP	ASCR \| CD230 \| CJD \| GSS \| MGC26679 \| PRIP \| PrP \| PrP27-30 \| PrP33-35C \| PrPc \| prion	prion protein	-	HPRD	10988071
PTEN	10q23del \| BZS \| MGC11227 \| MHAM \| MMAC1 \| PTEN1 \| TEP1	phosphatase and tensin homolog	-	HPRD,BioGRID	12176037
PTEN	10q23del \| BZS \| MGC11227 \| MHAM \| MMAC1 \| PTEN1 \| TEP1	phosphatase and tensin homolog	caveolin-1 interacts with PTEN.	BIND	12176037
PTGS2	COX-2 \| COX2 \| GRIPGHS \| PGG/HS \| PGHS-2 \| PHS-2 \| hCox-2	prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	-	HPRD,BioGRID	11432874
PTPN1	PTP1B	protein tyrosine phosphatase, non-receptor type 1	caveolin-1 interacts with PTP1B.	BIND	12176037
PTPN1	PTP1B	protein tyrosine phosphatase, non-receptor type 1	-	HPRD,BioGRID	12176037
PTPN11	BPTP3 \| CFC \| MGC14433 \| NS1 \| PTP-1D \| PTP2C \| SH-PTP2 \| SH-PTP3 \| SHP2	protein tyrosine phosphatase, non-receptor type 11	-	HPRD,BioGRID	12176037
PTPN11		protein tyrosine phosphatase, non-receptor type 11	caveolin-1 interacts with SH-PTP2.	BIND	12176037
PTPN6	HCP \| HCPH \| HPTP1C \| PTP-1C \| SH-PTP1 \| SHP-1 \| SHP-1L \| SHP1	protein tyrosine phosphatase, non-receptor type 6	-	HPRD,BioGRID	12176037
PTPN6		protein tyrosine phosphatase, non-receptor type 6	caveolin-1 interacts with PTP-1C.	BIND	12176037
PTPRF	FLJ43335 \| FLJ45062 \| FLJ45567 \| LAR	protein tyrosine phosphatase, receptor type, F	-	HPRD,BioGRID	12176037
PTPRF	FLJ43335 \| FLJ45062 \| FLJ45567 \| LAR	protein tyrosine phosphatase, receptor type, F	caveolin-1 interacts with LAR.	BIND	12176037
RCVRN	RCV1	recoverin	-	HPRD,BioGRID	12507501
S1PR1	CHEDG1 \| D1S3362 \| ECGF1 \| EDG-1 \| EDG1 \| FLJ58121 \| S1P1	sphingosine-1-phosphate receptor 1	-	HPRD,BioGRID	10921915
SCP2	DKFZp686C12188 \| DKFZp686D11188 \| NLTP \| NSL-TP \| SCPX	sterol carrier protein 2	Affinity Capture-Western FRET Two-hybrid	BioGRID	15182174
SMAD2	JV18 \| JV18-1 \| MADH2 \| MADR2 \| MGC22139 \| MGC34440 \| hMAD-2 \| hSMAD2	SMAD family member 2	Co-fractionation	BioGRID	11102446
SRC	ASV \| SRC1 \| c-SRC \| p60-Src	v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	-	HPRD,BioGRID	8910575
STOML3	Epb7.2l \| SRO	stomatin (EPB72)-like 3	-	HPRD	12122055
STRN	MGC125642 \| SG2NA	striatin, calmodulin binding protein	-	HPRD	11707266
STRN4	FLJ35594 \| ZIN \| zinedin	striatin, calmodulin binding protein 4	-	HPRD	11707266
TGFBR1	AAT5 \| ACVRLK4 \| ALK-5 \| ALK5 \| LDS1A \| LDS2A \| SKR4 \| TGFR-1	transforming growth factor, beta receptor 1	-	HPRD,BioGRID	11102446
TNFRSF1B	CD120b \| TBPII \| TNF-R-II \| TNF-R75 \| TNFBR \| TNFR1B \| TNFR2 \| TNFR80 \| p75 \| p75TNFR	tumor necrosis factor receptor superfamily, member 1B	-	HPRD,BioGRID	11112773
TRADD	Hs.89862 \| MGC11078	TNFRSF1A-associated via death domain	-	HPRD,BioGRID	11112773
TRAF2	MGC:45012 \| TRAP \| TRAP3	TNF receptor-associated factor 2	-	HPRD,BioGRID	11112773 \|11805080
TRPC1	HTRP-1 \| MGC133334 \| MGC133335 \| TRP1	transient receptor potential cation channel, subfamily C, member 1	Affinity Capture-Western	BioGRID	10980191
TSC2	FLJ43106 \| LAM \| TSC4	tuberous sclerosis 2	Co-purification	BioGRID	12147258

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
KEGG_FOCAL_ADHESION	201	138	All SZGR genes in this pathway
KEGG_VIRAL_MYOCARDITIS	73	58	All SZGR genes in this pathway
BIOCARTA_NO1_PATHWAY	33	24	All SZGR genes in this pathway
BIOCARTA_INTEGRIN_PATHWAY	38	29	All SZGR genes in this pathway
ST_INTEGRIN_SIGNALING_PATHWAY	82	62	All SZGR genes in this pathway
PID_INSULIN_PATHWAY	45	32	All SZGR genes in this pathway
PID_PTP1B_PATHWAY	52	40	All SZGR genes in this pathway
PID_WNT_CANONICAL_PATHWAY	20	18	All SZGR genes in this pathway
PID_TNF_PATHWAY	46	33	All SZGR genes in this pathway
PID_P53_DOWNSTREAM_PATHWAY	137	94	All SZGR genes in this pathway
PID_ALK1_PATHWAY	26	21	All SZGR genes in this pathway
PID_PDGFRA_PATHWAY	22	18	All SZGR genes in this pathway
PID_VEGFR1_PATHWAY	26	23	All SZGR genes in this pathway
PID_VEGFR1_2_PATHWAY	69	57	All SZGR genes in this pathway
PID_TGFBR_PATHWAY	55	38	All SZGR genes in this pathway
REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL	91	65	All SZGR genes in this pathway
REACTOME_ENOS_ACTIVATION_AND_REGULATION	20	14	All SZGR genes in this pathway
REACTOME_BASIGIN_INTERACTIONS	30	23	All SZGR genes in this pathway
REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS	478	302	All SZGR genes in this pathway
REACTOME_HORMONE_SENSITIVE_LIPASE_HSL_MEDIATED_TRIACYLGLYCEROL_HYDROLYSIS	13	11	All SZGR genes in this pathway
REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT	46	37	All SZGR genes in this pathway
REACTOME_HEMOSTASIS	466	331	All SZGR genes in this pathway
PYEON_HPV_POSITIVE_TUMORS_DN	10	5	All SZGR genes in this pathway
NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP	285	181	All SZGR genes in this pathway
LIU_PROSTATE_CANCER_DN	481	290	All SZGR genes in this pathway
ONKEN_UVEAL_MELANOMA_DN	526	357	All SZGR genes in this pathway
BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_DN	169	118	All SZGR genes in this pathway
DAVICIONI_TARGETS_OF_PAX_FOXO1_FUSIONS_UP	255	177	All SZGR genes in this pathway
TURASHVILI_BREAST_DUCTAL_CARCINOMA_VS_LOBULAR_NORMAL_DN	69	43	All SZGR genes in this pathway
CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN	455	304	All SZGR genes in this pathway
CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN	460	312	All SZGR genes in this pathway
LAIHO_COLORECTAL_CANCER_SERRATED_UP	112	71	All SZGR genes in this pathway
BASAKI_YBX1_TARGETS_UP	290	177	All SZGR genes in this pathway
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_3D_UP	182	110	All SZGR genes in this pathway
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_10D_UP	194	122	All SZGR genes in this pathway
MULLIGHAN_MLL_SIGNATURE_1_DN	242	165	All SZGR genes in this pathway
SENESE_HDAC1_AND_HDAC2_TARGETS_DN	232	139	All SZGR genes in this pathway
KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP	1278	748	All SZGR genes in this pathway
SCIBETTA_KDM5B_TARGETS_DN	81	55	All SZGR genes in this pathway
ELVIDGE_HYPOXIA_UP	171	112	All SZGR genes in this pathway
ELVIDGE_HYPOXIA_BY_DMOG_UP	130	85	All SZGR genes in this pathway
ELVIDGE_HIF1A_TARGETS_DN	91	58	All SZGR genes in this pathway
ELVIDGE_HIF1A_AND_HIF2A_TARGETS_DN	104	72	All SZGR genes in this pathway
WAMUNYOKOLI_OVARIAN_CANCER_LMP_DN	199	124	All SZGR genes in this pathway
WAMUNYOKOLI_OVARIAN_CANCER_GRADES_1_2_DN	67	43	All SZGR genes in this pathway
DODD_NASOPHARYNGEAL_CARCINOMA_DN	1375	806	All SZGR genes in this pathway
KOKKINAKIS_METHIONINE_DEPRIVATION_48HR_UP	128	95	All SZGR genes in this pathway
KOKKINAKIS_METHIONINE_DEPRIVATION_96HR_UP	117	84	All SZGR genes in this pathway
MARKEY_RB1_ACUTE_LOF_DN	228	137	All SZGR genes in this pathway
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN	1781	1082	All SZGR genes in this pathway
CAIRO_PML_TARGETS_BOUND_BY_MYC_DN	14	12	All SZGR genes in this pathway
BERENJENO_TRANSFORMED_BY_RHOA_DN	394	258	All SZGR genes in this pathway
KERLEY_RESPONSE_TO_CISPLATIN_UP	44	30	All SZGR genes in this pathway
MISSIAGLIA_REGULATED_BY_METHYLATION_DN	122	67	All SZGR genes in this pathway
MIDORIKAWA_AMPLIFIED_IN_LIVER_CANCER	55	38	All SZGR genes in this pathway
LINDGREN_BLADDER_CANCER_CLUSTER_2B	392	251	All SZGR genes in this pathway
WANG_METHYLATED_IN_BREAST_CANCER	35	25	All SZGR genes in this pathway
MARTORIATI_MDM4_TARGETS_FETAL_LIVER_UP	227	137	All SZGR genes in this pathway
GRUETZMANN_PANCREATIC_CANCER_UP	358	245	All SZGR genes in this pathway
INAMURA_LUNG_CANCER_SCC_DN	14	6	All SZGR genes in this pathway
WATTEL_AUTONOMOUS_THYROID_ADENOMA_DN	55	29	All SZGR genes in this pathway
SASAI_RESISTANCE_TO_NEOPLASTIC_TRANSFROMATION	50	31	All SZGR genes in this pathway
GROSS_ELK3_TARGETS_UP	27	16	All SZGR genes in this pathway
GROSS_HYPOXIA_VIA_HIF1A_DN	110	78	All SZGR genes in this pathway
NUYTTEN_NIPP1_TARGETS_DN	848	527	All SZGR genes in this pathway
GUENTHER_GROWTH_SPHERICAL_VS_ADHERENT_DN	26	19	All SZGR genes in this pathway
BERTUCCI_INVASIVE_CARCINOMA_DUCTAL_VS_LOBULAR_DN	46	34	All SZGR genes in this pathway
RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_MODERATELY_DN	110	64	All SZGR genes in this pathway
SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_UP	176	115	All SZGR genes in this pathway
KOYAMA_SEMA3B_TARGETS_DN	411	249	All SZGR genes in this pathway
BENPORATH_NANOG_TARGETS	988	594	All SZGR genes in this pathway
ROSS_ACUTE_MYELOID_LEUKEMIA_CBF	82	57	All SZGR genes in this pathway
TARTE_PLASMA_CELL_VS_B_LYMPHOCYTE_UP	78	51	All SZGR genes in this pathway
SASAKI_ADULT_T_CELL_LEUKEMIA	176	122	All SZGR genes in this pathway
ROSS_AML_WITH_AML1_ETO_FUSION	76	55	All SZGR genes in this pathway
ZHANG_TARGETS_OF_EWSR1_FLI1_FUSION	88	68	All SZGR genes in this pathway
LEI_MYB_TARGETS	318	215	All SZGR genes in this pathway
HADDAD_B_LYMPHOCYTE_PROGENITOR	293	193	All SZGR genes in this pathway
CROMER_METASTASIS_DN	81	58	All SZGR genes in this pathway
VERHAAK_AML_WITH_NPM1_MUTATED_DN	246	180	All SZGR genes in this pathway
YAGI_AML_FAB_MARKERS	191	131	All SZGR genes in this pathway
REN_ALVEOLAR_RHABDOMYOSARCOMA_DN	408	274	All SZGR genes in this pathway
WANG_SMARCE1_TARGETS_DN	371	218	All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_24HR_DN	148	102	All SZGR genes in this pathway
LINDVALL_IMMORTALIZED_BY_TERT_UP	78	48	All SZGR genes in this pathway
SIMBULAN_PARP1_TARGETS_UP	31	23	All SZGR genes in this pathway
LU_AGING_BRAIN_UP	262	186	All SZGR genes in this pathway
JIANG_HYPOXIA_NORMAL	311	205	All SZGR genes in this pathway
MCDOWELL_ACUTE_LUNG_INJURY_DN	48	33	All SZGR genes in this pathway
TRACEY_RESISTANCE_TO_IFNA2_DN	32	23	All SZGR genes in this pathway
CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_1	528	324	All SZGR genes in this pathway
HARRIS_BRAIN_CANCER_PROGENITORS	44	23	All SZGR genes in this pathway
FOSTER_TOLERANT_MACROPHAGE_DN	409	268	All SZGR genes in this pathway
SAGIV_CD24_TARGETS_UP	23	15	All SZGR genes in this pathway
SAGIV_CD24_TARGETS_DN	46	26	All SZGR genes in this pathway
SMID_BREAST_CANCER_LUMINAL_B_DN	564	326	All SZGR genes in this pathway
SMID_BREAST_CANCER_NORMAL_LIKE_UP	476	285	All SZGR genes in this pathway
BONOME_OVARIAN_CANCER_SURVIVAL_SUBOPTIMAL_DEBULKING	510	309	All SZGR genes in this pathway
ZHENG_GLIOBLASTOMA_PLASTICITY_DN	58	39	All SZGR genes in this pathway
LABBE_WNT3A_TARGETS_UP	112	71	All SZGR genes in this pathway
LABBE_TGFB1_TARGETS_DN	108	64	All SZGR genes in this pathway
HUANG_DASATINIB_RESISTANCE_UP	81	53	All SZGR genes in this pathway
MATTHEWS_AP1_TARGETS	17	12	All SZGR genes in this pathway
TAYLOR_METHYLATED_IN_ACUTE_LYMPHOBLASTIC_LEUKEMIA	77	52	All SZGR genes in this pathway
ALONSO_METASTASIS_UP	198	128	All SZGR genes in this pathway
RUIZ_TNC_TARGETS_DN	142	79	All SZGR genes in this pathway
SWEET_LUNG_CANCER_KRAS_DN	435	289	All SZGR genes in this pathway
SHAFFER_IRF4_TARGETS_IN_MYELOMA_VS_MATURE_B_LYMPHOCYTE	101	76	All SZGR genes in this pathway
SHAFFER_IRF4_TARGETS_IN_PLASMA_CELL_VS_MATURE_B_LYMPHOCYTE	67	51	All SZGR genes in this pathway
SHAFFER_IRF4_TARGETS_IN_ACTIVATED_B_LYMPHOCYTE	81	66	All SZGR genes in this pathway
SHAFFER_IRF4_TARGETS_IN_ACTIVATED_DENDRITIC_CELL	65	49	All SZGR genes in this pathway
ZHAN_LATE_DIFFERENTIATION_GENES_UP	33	24	All SZGR genes in this pathway
VALK_AML_CLUSTER_13	30	20	All SZGR genes in this pathway
YAGI_AML_WITH_T_8_21_TRANSLOCATION	368	247	All SZGR genes in this pathway
LI_PROSTATE_CANCER_EPIGENETIC	30	22	All SZGR genes in this pathway
DANG_REGULATED_BY_MYC_DN	253	192	All SZGR genes in this pathway
WONG_ADULT_TISSUE_STEM_MODULE	721	492	All SZGR genes in this pathway
HIRSCH_CELLULAR_TRANSFORMATION_SIGNATURE_DN	103	67	All SZGR genes in this pathway
CHICAS_RB1_TARGETS_GROWING	243	155	All SZGR genes in this pathway
CHICAS_RB1_TARGETS_CONFLUENT	567	365	All SZGR genes in this pathway
BRUINS_UVC_RESPONSE_LATE	1137	655	All SZGR genes in this pathway
PASINI_SUZ12_TARGETS_DN	315	215	All SZGR genes in this pathway
DELPUECH_FOXO3_TARGETS_UP	68	49	All SZGR genes in this pathway
WIEDERSCHAIN_TARGETS_OF_BMI1_AND_PCGF2	57	39	All SZGR genes in this pathway
KOINUMA_TARGETS_OF_SMAD2_OR_SMAD3	824	528	All SZGR genes in this pathway
FORTSCHEGGER_PHF8_TARGETS_DN	784	464	All SZGR genes in this pathway
PHONG_TNF_RESPONSE_VIA_P38_COMPLETE	227	151	All SZGR genes in this pathway
LIM_MAMMARY_STEM_CELL_UP	489	314	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124/506	655	661	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	655	661	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-142-5p	1665	1671	1A	hsa-miR-142-5p	CAUAAAGUAGAAAGCACUAC
miR-17-5p/20/93.mr/106/519.d	1522	1528	1A	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-199	1573	1579	m8	hsa-miR-199a	CCCAGUGUUCAGACUACCUGUUC
miR-199	1573	1579	m8	hsa-miR-199b	CCCAGUGUUUAGACUAUCUGUUC
miR-204/211	396	402	1A	hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
miR-204/211	396	402	1A	hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
miR-30-3p	1615	1622	1A,m8	hsa-miR-30a-3p	CUUUCAGUCGGAUGUUUGCAGC
miR-30-3p	1615	1622	1A,m8	hsa-miR-30e-3p	CUUUCAGUCGGAUGUUUACAGC
miR-431	1727	1733	1A	hsa-miR-431	UGUCUUGCAGGCCGUCAUGCA
miR-505	286	292	1A	hsa-miR-505	GUCAACACUUGCUGGUUUCCUC
miR-96	55	61	m8	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.