Search results: The pahtway p2990 has 371 genes in the original annotation. Currently, there are 218 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
25805BAMBINMABMP and activin membrane-bound inhibitor10p12.3-p11.2CV:PGCnp
9397NMT2-N-myristoyltransferase 210p13CV:PGCnpAscano FMRP targets
7073TIAL1TCBP | TIARTIA1 cytotoxic granule-associated RNA binding protein-like 110qCV:GWASdb
CV:PGCnp
81603TRIM8GERP | RNF27tripartite motif containing 810q24.3CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
10935PRDX3AOP-1 | AOP1 | HBC189 | MER5 | PRO1748 | SP-22 | prx-IIIperoxiredoxin 310q25-q26CV:PGCnp
8038ADAM12ADAM12-OT1 | CAR10 | MCMP | MCMPMltna | MLTN | MLTNAADAM metallopeptidase domain 1210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
10539GLRX3GLRX4 | GRX3 | GRX4 | PICOT | TXNL2 | TXNL3glutaredoxin 310q26CV:PGCnp
GSMA_IIA
664BNIP3NIP3BCL2/adenovirus E1B 19kDa interacting protein 310q26.3CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_IIA
847CAT-catalase11p13CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
22800RRAS2TC21related RAS viral (r-ras) oncogene homolog 211p15.2CV:PGCnp
DMG:Wockner_2014
9415FADS2D6D | DES6 | FADSD6 | LLCDL2 | SLL0262 | TU13fatty acid desaturase 211q12.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
53838C11orf24DM4E3chromosome 11 open reading frame 2411q13CV:PGCnp
DMG:Wockner_2014
51083GALETL8 | GAL-GMAP | GALN | GLNN | GMAPgalanin/GMAP prepropeptide11q13.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
11098PRSS23SIG13 | SPUVE | ZSIG13protease, serine 2311q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
60496AASDHPPTAASD-PPT | ACPS | CGI-80 | LYS2 | LYS5aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase11q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
1737DLATDLTA | PDC-E2 | PDCE2dihydrolipoamide S-acetyltransferase11q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
81029WNT5B-wingless-type MMTV integration site family member 5B12p13.3CV:PGCnp
DMG:Montano_2016
928CD9BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29CD9 molecule12p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
490ATP2B1PMCA1 | PMCA1kbATPase plasma membrane Ca2+ transporting 112q21.3CV:PGCnp
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1848DUSP6HH19 | MKP3 | PYST1dual specificity phosphatase 612q21.33CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
59277NTN4PRO3091netrin 412q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
4940OAS3p100 | p100OAS2'-5'-oligoadenylate synthetase 312q24.2CV:PGCnp
DMG:Wockner_2014
26278SACSARSACS | DNAJC29 | PPP1R138 | SPAX6sacsin molecular chaperone13q12CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
10808HSPH1HSP105 | HSP105A | HSP105B | NY-CO-25heat shock protein family H (Hsp110) member 113q12.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
7223TRPC4HTRP-4 | HTRP4 | TRP4transient receptor potential cation channel subfamily C member 413q13.3CV:PGCnp
8803SUCLA2A-BETA | MTDPS5 | SCS-betaAsuccinate-CoA ligase, ADP-forming, beta subunit13q14.2CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
9882TBC1D4AS160 | NIDDM5TBC1 domain family member 413q22.2CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
26050SLITRK5LRRC11 | bA364G4.2SLIT and NTRK like family member 513q31.2CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
114088TRIM9RNF91 | SPRINGtripartite motif containing 914q22.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
1735DIO35DIII | D3 | DIOIII | TXDI3deiodinase, iodothyronine, type III14q32CV:PGCnp
PMID:cooccur
7443VRK1PCH1 | PCH1Avaccinia related kinase 114q32CV:PGCnpAscano FMRP targets
4016LOXL1LOL | LOXLlysyl oxidase like 115q22CV:PGCnp
CV:PheWAS
4205MEF2AADCAD1 | RSRFC4 | RSRFC9 | mef2myocyte enhancer factor 2A15q26CV:PGCnp
PMID:cooccur
55215FANCIKIAA1794Fanconi anemia complementation group I15q26.1CV:PGCnpAscano FMRP targets
6627SNRPA1Lea1small nuclear ribonucleoprotein polypeptide A'15q26.3CV:PGCnp
DMG:Wockner_2014
4706NDUFAB1ACP | FASN2A | SDAPNADH:ubiquinone oxidoreductase subunit AB116p12.2CV:PGCnp
Expression
GSMA_IIE
PMID:cooccur
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
80777CYB5BCYB5-M | CYPB5M | OMB5cytochrome b5 type B (outer mitochondrial membrane)16q22.1CV:PGCnpG2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
54849DEF8-differentially expressed in FDCP 8 homolog (mouse)16q24.3CV:PGCnp
708C1QBPGC1QBP | HABP1 | SF2p32 | gC1Q-R | gC1qR | p32complement component 1, q subcomponent binding protein17p13.3CV:PGCnp
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
64750SMURF2-SMAD specific E3 ubiquitin protein ligase 217q22-q23CV:PGCnp
DMG:Jaffe_2016
10801SEPT9AF17q25 | MSF | MSF1 | NAPB | PNUTL4 | SINT1 | SeptD1septin 917q25CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3959LGALS3BP90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90lectin, galactoside-binding, soluble, 3 binding protein17q25CV:PGCnp
DMG:vanEijk_2014
4884NPTX1NP1neuronal pentraxin 117q25.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
Potential synaptic genes
4729NDUFV2CI-24kNADH:ubiquinone oxidoreductase core subunit V218p11.22Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
10907TXNL4ABMKS | DIB1 | DIM1 | SNRNP15 | TXNL4 | U5-15kDthioredoxin like 4A18q23CV:PGCnp
970CD70CD27L | CD27LG | TNFSF7 | TNLG8ACD70 molecule19p13CV:PGCnp
DMG:Jaffe_2016
51477ISYNA1INO1 | INOS | IPS | IPS 1 | IPS-1inositol-3-phosphate synthase 119p13.11CV:PGCnp
6511SLC1A6EAAT4solute carrier family 1 member 619p13.12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
7001PRDX2HEL-S-2a | NKEF-B | NKEFB | PRP | PRX2 | PRXII | PTX1 | TDPX1 | TPX1 | TSAperoxiredoxin 219p13.2CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
898CCNE1CCNE | pCCNE1cyclin E119q12CV:PGCnp
DMG:Montano_2016
Network
9141PDCD5TFAR19programmed cell death 519q13.11CV:PGCnp
DMG:Nishioka_2013
25950RWDD3RSUMERWD domain containing 31p21.3CV:PGCnp
DMG:Wockner_2014
148534TMEM56-transmembrane protein 561p21.3CV:PGCnp
DMG:Wockner_2014
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
1969EPHA2ARCC2 | CTPA | CTPP1 | CTRCT6 | ECKEPH receptor A21p36CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
1855DVL1DRS2 | DVL | DVL1L1 | DVL1P1dishevelled segment polarity protein 11p36DNM:Fromer_2014
Network
CompositeSet
6723SRMPAPT | SPDSY | SPS1 | SRML1spermidine synthase1p36-p22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
998CDC42CDC42Hs | G25K | TKScell division cycle 421p36.1CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
6390SDHBCWS2 | IP | PGL4 | SDH | SDH1 | SDH2 | SDHIPsuccinate dehydrogenase complex iron sulfur subunit B1p36.1-p35CV:PGCnp
Expression
10726NUDCHNUDC | MNUDC | NPD011nudC nuclear distribution protein1p36.11CV:PGCnp
DMG:Nishioka_2013
8672EIF4G3eIF-4G 3 | eIF4G 3 | eIF4GIIeukaryotic translation initiation factor 4 gamma 31p36.12CV:GWAScat
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
2475MTORFRAP | FRAP1 | FRAP2 | RAFT1 | RAPT1 | SKSmechanistic target of rapamycin1p36.2CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23435TARDBPALS10 | TDP-43TAR DNA binding protein1p36.22CV:PGCnp
PMID:cooccur
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
8515ITGA10PRO827integrin subunit alpha 101q21CNV:YES
GSMA_I
GSMA_IIA
6273S100A2CAN19 | S100LS100 calcium binding protein A21q21DMG:Montano_2016
GSMA_I
GSMA_IIA
6279S100A860B8AG | CAGA | CFAG | CGLA | CP-10 | L1Ag | MA387 | MIF | MRP8 | NIF | P8S100 calcium binding protein A81q21GSMA_I
GSMA_IIA
PMID:cooccur
5999RGS4RGP4 | SCZD9regulator of G-protein signaling 41q23.3Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
GSMA_IIA
Network
PMID:cooccur
Potential synaptic genes
27101CACYBPGIG5 | PNAS-107 | S100A6BP | SIPcalcyclin binding protein1q24-q25CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
51278IER5SBBI48immediate early response 51q25.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
51377UCHL5CGI-70 | INO80R | UCH-L5 | UCH37ubiquitin C-terminal hydrolase L51q32CV:PGCnp
DMG:Jaffe_2016
2271FHFMRD | HLRCC | LRCC | MCL | MCUL1fumarate hydratase1q42.1CV:PGCnp
PMID:cooccur
5332PLCB4ARCND2 | PI-PLCphospholipase C beta 420p12CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
25939SAMHD1CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88SAM domain and HD domain 120pter-q12CV:PGCnp
DMG:Jaffe_2016
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
1434CSE1LCAS | CSE1 | XPO2CSE1 chromosome segregation 1-like (yeast)20q13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
28231SLCO4A1OATP-E | OATP1 | OATP4A1 | OATPE | OATPRP1 | POAT | SLC21A12solute carrier organic anion transporter family member 4A120q13.33CV:PGCnp
9510ADAMTS1C3-C5 | METH1ADAM metallopeptidase with thrombospondin type 1 motif 121q21.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
4599MX1IFI-78K | IFI78 | MX | MxAMX dynamin like GTPase 121q22.3CV:PGCnp
PMID:cooccur
4600MX2MXBMX dynamin like GTPase 221q22.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3976LIFCDF | DIA | HILDA | MLPLIleukemia inhibitory factor22q12.2CV:PGCnp
GSMA_I
PMID:cooccur
3099HK2HKII | HXK2hexokinase 22p13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
1545CYP1B1CP1B | CYPIB1 | GLC3A | P4501B1cytochrome P450 family 1 subfamily B member 12p22.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
3899AFF3LAF4 | MLLT2-likeAF4/FMR2 family member 32q11.2-q12CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
7857SCG2CHGC | EM66 | SN | SgIIsecretogranin II2q35-q36CV:GWASdb
CV:PGCnp
Expression
GR_Ng
GSMA_IIA
GSMA_IIE
NEUROTROPHIN SIGNALING
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
1849DUSP7MKPX | PYST2dual specificity phosphatase 73p21CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
211ALAS1ALAS | ALAS-H | ALAS3 | ALASH | MIG45'-aminolevulinate synthase 13p21.1CV:PGCnp
DNM:Fromer_2014
LK:YES
CompositeSet
Ascano FMRP targets
55830GLT8D1AD-017 | MSTP139glycosyltransferase 8 domain containing 13p21.1CV:GWAScat
CV:GWASdb
CV:PGCnp
LK:YES
PMID:cooccur
26354GNL3C77032 | E2IG3 | NNP47 | NSG protein nucleolar 33p21.1CV:PGCnp
DMG:Wockner_2014
LK:YES
64866CDCP1CD318 | SIMA135 | TRASKCUB domain containing protein 13p21.31CV:GWASdb
CV:PGCnp
9497SLC4A7NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6solute carrier family 4 member 73p22CV:PGCnp
GO_Annotation
GSMA_I
25994HIGD1AHIG1 | RCF1aHIG1 hypoxia inducible domain family member 1A3p22.1CV:PGCnp
DMG:Jaffe_2016
26032SUSD5-sushi domain containing 53p22.3CV:PGCnp
GSMA_I
8850KAT2BCAF | P/CAF | PCAFlysine acetyltransferase 2B3p24CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
79750ZNF385DZNF659zinc finger protein 385D3p24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4071TM4SF1H-L6 | L6 | M3S1 | TAAL6transmembrane 4 L six family member 13q21-q25DMG:Wockner_2014
8706B3GALNT1B3GALT3 | GLCT3 | GLOB | Gb4Cer | P | P1 | beta3Gal-T3 | galT3beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)3q25CV:PGCnp
DMG:Jaffe_2016
2257FGF12FGF12B | FHF1fibroblast growth factor 123q28CV:PGCnp
GO_Annotation
323APBB2FE65L | FE65L1amyloid beta precursor protein binding family B member 24p13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
55161TMEM331600019D15Rik | SHINC3transmembrane protein 334p13CV:GWASdb
CV:PGCnp
7345UCHL1HEL-117 | HEL-S-53 | NDGOA | PARK5 | PGP 9.5 | PGP9.5 | PGP95 | Uch-L1ubiquitin C-terminal hydrolase L14p14CV:PGCnp
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23244PDS5APIG54 | SCC-112 | SCC112PDS5 cohesin associated factor A4p14CV:PGCnp
5860QDPRDHPR | PKU2 | SDR33C1quinoid dihydropteridine reductase4p15.31CV:GWASdb
CV:PGCnp
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
51056LAP3HEL-S-106 | LAP | LAPEP | PEPSleucine aminopeptidase 34p15.32CV:PGCnp
64151NCAPGCAPG | CHCG | NY-MEL-3 | YCG1non-SMC condensin I complex subunit G4p15.33CV:PGCnpAscano FMRP targets
80306MED281500003D12Rik | EG1 | magicinmediator complex subunit 284p16CV:PGCnp
10417SPON2DIL-1 | DIL1 | M-SPONDIN | MINDINspondin 24p16.3CV:PGCnp
GO_Annotation
521ATP5IATP5KATP synthase, H+ transporting, mitochondrial Fo complex subunit E4p16.3CV:PGCnp
DMG:Nishioka_2013
CompositeSet
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
10296MAEAEMLP | EMP | GID9 | HLC-10 | PIG5macrophage erythroblast attacher4p16.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
2250FGF5HBGF-5 | Smag-82 | TCMGLYfibroblast growth factor 54q21CV:PGCnp
GO_Annotation
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2921CXCL3CINC-2b | GRO3 | GROg | MIP-2b | MIP2B | SCYB3C-X-C motif chemokine ligand 34q21CV:PGCnp
DMG:Jaffe_2016
255119C4orf22-chromosome 4 open reading frame 224q21.21CV:PGCnp
DMG:Wockner_2014
58478ENOPH1E1 | MASA | MST145 | mtnCenolase-phosphatase 14q21.22CV:PGCnp
DMG:Jaffe_2016
10855HPSEHPA | HPA1 | HPR1 | HPSE1 | HSE1heparanase4q21.3CV:PGCnp
DMG:Jaffe_2016
10611PDLIM5ENH | ENH1 | L9 | LIMPDZ and LIM domain 54q22Association
CV:PGCnp
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
1977EIF4EAUTS19 | CBP | EIF4E1 | EIF4EL1 | EIF4F | eIF-4Eeukaryotic translation initiation factor 4E4q23CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
64116SLC39A8BIGM103 | CDG2N | LZT-Hs6 | PP3105 | ZIP8solute carrier family 39 member 84q24CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
54433GAR1NOLA1GAR1 ribonucleoprotein4q25DMG:Wockner_2014
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
27068PPA2HSPC124 | SID6-306pyrophosphatase (inorganic) 24q25CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2247FGF2BFGF | FGF-2 | FGFB | HBGF-2fibroblast growth factor 24q26CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
51809GALNT7GALNAC-T7 | GalNAcT7polypeptide N-acetylgalactosaminyltransferase 74q31.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
8467SMARCA5ISWI | SNF2H | WCRF135 | hISWI | hSNF2HSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 54q31.1-q31.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
8821INPP4B-inositol polyphosphate-4-phosphatase type II B4q31.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6423SFRP2FRP-2 | SARP1 | SDF-5secreted frizzled-related protein 24q31.3CV:PGCnp
54969C4orf27-chromosome 4 open reading frame 274q33CV:PGCnp
8470SORBS2ARGBP2 | PRO0618sorbin and SH3 domain containing 24q35.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
3157HMGCS1HMGCS3-hydroxy-3-methylglutaryl-CoA synthase 15p12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
10769PLK2SNK | hPlk2 | hSNKpolo like kinase 25q12.1-q13.2CV:PGCnp
5921RASA1CM-AVM | CMAVM | GAP | PKWS | RASA | RASGAP | p120 | p120GAP | p120RASGAPRAS p21 protein activator 15q13.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
10622POLR3GRPC32 | RPC7polymerase (RNA) III subunit G5q14.3CV:PGCnp
10915TCERG1CA150 | TAF2S | Urn1transcription elongation regulator 15q31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
GSMA_IIE
9555H2AFYH2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2H2A histone family member Y5q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3313HSPA9CRP40 | CSA | EVPLS | GRP-75 | GRP75 | HEL-S-124m | HSPA9B | MOT | MOT2 | MTHSP75 | PBP74 | SAANheat shock protein family A (Hsp70) member 95q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
57396CLK4-CDC like kinase 45q35CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
8614STC2STC-2 | STCRPstanniocalcin 25q35.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
51491NOP16HSPC111 | HSPC185NOP16 nucleolar protein5q35.2CV:PGCnp
80758PRR7-proline rich 7 (synaptic)5q35.3DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
G2Cdb.humanPSD
G2Cdb.humanPSP
94081SFXN1-sideroflexin 15q35.3CV:GWASdb
CV:PGCnp
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
CompositeSet
3159HMGA1HMG-R | HMGA1A | HMGIYhigh mobility group AT-hook 16p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
27242TNFRSF21BM-018 | CD358 | DR6tumor necrosis factor receptor superfamily member 216p21.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
2030SLC29A1ENT1solute carrier family 29 member 16p21.1CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
3106HLA-BAS | Bw-47 | Bw-50 | HLAB | SPDA1major histocompatibility complex, class I, B6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
Network
PMID:cooccur
3107HLA-CD6S204 | HLA-JY3 | HLAC | HLC-C | PSORS1major histocompatibility complex, class I, C6p21.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_I
Network
PMID:cooccur
CompositeSet
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
6890TAP1ABC17 | ABCB2 | APT1 | D6S114E | PSF-1 | PSF1 | RING4 | TAP1*0102N | TAP1Ntransporter 1, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
6891TAP2ABC18 | ABCB3 | APT2 | D6S217E | PSF-2 | PSF2 | RING11transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
5696PSMB8ALDD | D6S216 | D6S216E | JMP | LMP7 | NKJO | PSMB5i | RING10proteasome subunit beta 86p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
5698PSMB9LMP2 | PSMB6i | RING12 | beta1iproteasome subunit beta 96p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
6732SRPK1SFRSK1SRSF protein kinase 16p21.31CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIE
100507436MICAMIC-A | PERB11.1MHC class I polypeptide-related sequence A6p21.33CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
221687RNF182-ring finger protein 1826p23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
81853TMEM14B-transmembrane protein 14B6p25.1-p23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
7803PTP4A1HH72 | PRL-1 | PRL1 | PTP(CAAX1) | PTPCAAX1protein tyrosine phosphatase type IVA, member 16q12CV:GWASdb
CV:PGCnp
51020HDDC2C6orf74 | CGI-130 | NS5ATP2 | dJ167O5.2HD domain containing 26q13-q24.3CV:PGCnp
DMG:Wockner_2014
4907NT5ECALJA | CD73 | E5NT | NT | NT5 | NTE | eN | eNT5'-nucleotidase ecto6q14-q21CV:GWASdb
CV:PGCnp
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
28962OSTM1GIPN | GL | HSPC019 | OPTB5osteopetrosis associated transmembrane protein 16q21CV:GWAScat
CV:GWASdb
CV:PGCnp
4121MAN1A1HUMM3 | HUMM9 | MAN9mannosidase alpha class 1A member 16q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
7164TPD52L1D53tumor protein D52-like 16q22-q23CV:PGCnp
DMG:Wockner_2014
84870RSPO3CRISTIN1 | PWTSR | THSD2R-spondin 36q22.33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
5325PLAGL1LOT1 | ZAC | ZAC1PLAG1 like zinc finger 16q24-q25CV:PGCnp
DMG:Wockner_2014
6648SOD2IPOB | MNSOD | MVCD6superoxide dismutase 2, mitochondrial6q25.3Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
1956EGFRERBB | ERBB1 | HER1 | NISBD2 | PIG61 | mENAepidermal growth factor receptor7p12Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
27075TSPAN13NET-6 | NET6 | TM4SF13tetraspanin 137p21.1CV:PGCnp
DMG:Jaffe_2016
7291TWIST1ACS3 | BPES2 | BPES3 | CRS | CRS1 | CSO | SCS | TWIST | bHLHa38twist family bHLH transcription factor 17p21.2CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
54468MIOS-missing oocyte, meiosis regulator, homolog (Drosophila)7p21.3CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
PMID:cooccur
10512SEMA3CSEMAE | SemEsemaphorin 3C7q21-q31CV:PGCnp
DMG:Wockner_2014
389538MGC72080-MGC72080 pseudogene7q21.3CV:PGCnp
64921CASD1C7orf12 | NBLA04196CAS1 domain containing 17q21.3CV:PGCnp
10248POP70610037N12Rik | RPP2 | RPP20POP7 homolog, ribonuclease P/MRP subunit7q22CV:PGCnp
10467ZNHIT1CG1I | ZNFN4A1zinc finger HIT-type containing 17q22.1CV:PGCnp
DMG:Jaffe_2016
857CAV1BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21caveolin 17q31.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
858CAV2CAVcaveolin 27q31.1CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
27147DENND2AFAM31D | KIAA1277DENN domain containing 2A7q34CV:PGCnp
231AKR1B1ADR | ALDR1 | ALR2 | ARaldo-keto reductase family 1, member B1 (aldose reductase)7q35CV:PGCnp
DMG:Jaffe_2016
3084NRG1ARIA | GGF | GGF2 | HGL | HRG | HRG1 | HRGA | MST131 | MSTP131 | NDF | NRG1-IT2 | SMDFneuregulin 18p12Association
Core
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
55872PBKCT84 | HEL164 | Nori-3 | SPK | TOPKPDZ binding kinase8p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
79870BAALC-brain and acute leukemia, cytoplasmic8q22.3CV:PGCnp
DMG:Wockner_2014
23414ZFPM2DIH3 | FOG2 | SRXY9 | ZC2HC11B | ZNF89B | hFOG-2zinc finger protein, FOG family member 28q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4982TNFRSF11BOCIF | OPG | PDB5 | TR1tumor necrosis factor receptor superfamily member 11b8q24CV:PGCnp
CV:PheWAS
10221TRIB1C8FW | GIG-2 | GIG2 | SKIP1 | TRB-1 | TRB1tribbles pseudokinase 18q24.13CV:PGCnp
DMG:Jaffe_2016
10488CREB3LUMAN | LZIP | sLZIPcAMP responsive element binding protein 39p13.3DMG:Nishioka_2013
4507MTAPBDMF | DMSFH | DMSMFH | HEL-249 | LGMBF | MSAP | c86fusmethylthioadenosine phosphorylase9p21CV:PGCnp
80173IFT74CCDC2 | CMG-1 | CMG1intraflagellar transport 749p21.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
54801HAUS6Dgt6 | FAM29AHAUS augmin like complex subunit 69p22.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
10682EBPCDPX2 | CHO2 | CPX | CPXD | MENDemopamil binding protein (sterol isomerase)Xp11.23-p11.22CV:PGCnp
PMID:cooccur
6102RP2DELXp11.3 | NM23-H10 | NME10 | TBCCD2 | XRP2retinitis pigmentosa 2 (X-linked recessive)Xp11.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6990DYNLT3RP3 | TCTE1L | TCTEX1Ldynein light chain Tctex-type 3Xp21CV:PGCnp
DEG:Zhao_2015
Potential synaptic genes
5277PIGAGPI3 | MCAHS2 | PIG-A | PNH1phosphatidylinositol glycan anchor biosynthesis class AXp22.1DMG:vanEijk_2014
6611SMSMRSR | SPMSY | SRS | SpSspermine synthaseXp22.1CV:PGCnp
PMID:cooccur
9367RAB9ARAB9RAB9A, member RAS oncogene familyXp22.2CV:PGCnp
55841WWC3BM042WWC family member 3Xp22.32CV:GWASdb
CV:PGCnp
25878MXRA5-matrix-remodelling associated 5Xp22.33CV:GWASdb
CV:PGCnp
546ATRXATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HXalpha thalassemia/mental retardation syndrome X-linkedXq21.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
2717GLAGALAgalactosidase alphaXq22GO_Annotation
PMID:cooccur