Search results: The pahtway p1667 has 1375 genes in the original annotation. Currently, there are 806 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
84930MASTLGREATWALL | GW | GWL | MAST-L | THC2microtubule associated serine/threonine kinase like10p12.1CV:PGCnp
221061FAM171A1C10orf38family with sequence similarity 171 member A110p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
Ascano FMRP targets
Potential synaptic genes
55691FRMD4ACCAFCA | FRMD4 | bA295P9.4FERM domain containing 4A10p13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
79723SUV39H2KMT1Bsuppressor of variegation 3-9 homolog 210p13DMG:Jaffe_2016Chromatin Remodeling Genes
55388MCM10CNA43 | DNA43 | PRO2249minichromosome maintenance 10 replication initiation factor10p13CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
55526DHTKD1AMOXAD | CMT2Qdehydrogenase E1 and transketolase domain containing 110p14CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
Ascano FMRP targets
55176SEC61A2-Sec61 translocon alpha 2 subunit10p14CV:PGCnp
23560GTPBP4CRFG | NGB | NOG1GTP binding protein 410p15-p14CV:PGCnp
100287932TIMM23TIM23translocase of inner mitochondrial membrane 2310q11.23DMG:Nishioka_2013
80312TET1CXXC6 | LCX | MLL-TET1 | TET1-MLL | bA119F7.1tet methylcytosine dioxygenase 110q21CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
11130ZWINTHZwint-1 | KNTC2AP | SIP30 | ZWINT1ZW10 interacting kinetochore protein10q21-q22CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
84890ADOC10orf222-aminoethanethiol (cysteamine) dioxygenase10q21.3CV:PGCnp
Expression
PMID:cooccur
55749CCAR1-cell division cycle and apoptosis regulator 110q21.3CV:PGCnp
5551PRF1FLH2 | HPLH2 | P1 | PFN1 | PFPperforin 110q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
5464PPA1HEL-S-66p | IOPPP | PP | PP1 | SID6-8061pyrophosphatase (inorganic) 110q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
79009DDX50GU2 | GUB | RH-II/GuB | mcdrhDEAD-box helicase 5010q22.1CV:PGCnp
6832SUPV3L1SUV3Suv3 like RNA helicase10q22.1CV:PGCnp
DMG:Nishioka_2013
23234DNAJC9HDJC9 | JDD1 | SB73DnaJ heat shock protein family (Hsp40) member C910q22.2DMG:Wockner_2014
PMID:cooccur
26985AP3M1-adaptor related protein complex 3 mu 1 subunit10q22.2CV:PGCnp
PMID:cooccur
3778KCNMA1BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1potassium calcium-activated channel subfamily M alpha 110q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9562MINPP1HIPER1 | MINPP2 | MIPPmultiple inositol-polyphosphate phosphatase 110q23CV:GWASdb
CV:PGCnp
5728PTEN10q23del | BZS | CWS1 | DEC | GLM2 | MHAM | MMAC1 | PTEN1 | TEP1phosphatase and tensin homolog10q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
59ACTA2AAT6 | ACTSA | MYMY5actin, alpha 2, smooth muscle, aorta10q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
53354PANK1PANKpantothenate kinase 110q23.31CV:PGCnp
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
118932ANKRD22-ankyrin repeat domain 2210q23.31CV:PGCnp
DNM:Fromer_2014
CompositeSet
64318NOC3LAD24 | C10orf117 | FAD24NOC3 like DNA replication regulator10q23.33CV:PGCnp
56652C10orf2ATXN8 | IOSCA | MTDPS7 | PEO | PEO1 | PEOA3 | PRLTS5 | SANDO | SCA8 | TWINLchromosome 10 open reading frame 210q24CV:PGCnp
9060PAPSS2ATPSK2 | BCYM4 | SK23'-phosphoadenosine 5'-phosphosulfate synthase 210q24CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
355FASALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6Fas cell surface death receptor10q24.1CV:PGCnp
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
23082PPRC1PRCperoxisome proliferator-activated receptor gamma, coactivator-related 110q24.32CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
79004CUEDC2C10orf66 | bA18I14.5CUE domain containing 210q24.32CV:PGCnp
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
9446GSTO1GSTO 1-1 | GSTTLp28 | HEL-S-21 | P28 | SPG-Rglutathione S-transferase omega 110q25.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
8038ADAM12ADAM12-OT1 | CAR10 | MCMP | MCMPMltna | MLTN | MLTNAADAM metallopeptidase domain 1210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
9184BUB3BUB3L | hBUB3BUB3 mitotic checkpoint protein10q26CV:GWAScat
CV:PGCnp
GSMA_IIA
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
9793CKAP5CHTOG | MSPS | TOG | TOGp | ch-TOGcytoskeleton associated protein 511p11.2CV:PGCnp
CV:PheWAS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23279NUP160-nucleoporin 160kDa11p11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
10480EIF3MB5 | GA17 | PCID1 | TANGO7 | hfl-B5eukaryotic translation initiation factor 3 subunit M11p13CV:PGCnp
DMG:Jaffe_2016
5954RCN1HEL-S-84 | PIG20 | RCAL | RCNreticulocalbin 111p13CV:PGCnp
79832QSER1-glutamine and serine rich 111p13CV:PGCnp
DNM:Guipponi_2014
4076CAPRIN1GPIAP1 | GPIP137 | GRIP137 | M11S1 | RNG105 | p137GPIcell cycle associated protein 111p13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
81930KIF18AMS-KIF18A | PPP1R99kinesin family member 18A11p14.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
10944C11orf58IMAGE145052 | SMAPchromosome 11 open reading frame 5811p15.1CV:PGCnp
10196PRMT3HRMT1L3protein arginine methyltransferase 311p15.1CV:PGCnp
DMG:Jaffe_2016
5682PSMA1HC2 | HEL-S-275 | NU | PROS30proteasome subunit alpha 111p15.1CV:PGCnp
DMG:Jaffe_2016
Network
55553SOX6HSSOX6 | SOXDSRY-box 611p15.3CV:PGCnp
PMID:cooccur
3939LDHAGSD11 | HEL-S-133P | LDHM | PIG19lactate dehydrogenase A11p15.4CV:PGCnp
Expression
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
5286PIK3C2ACPK | PI3-K-C2(ALPHA) | PI3-K-C2Aphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha11p15.5-p14CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
26519TIMM10TIM10 | TIM10Atranslocase of inner mitochondrial membrane 10 homolog (yeast)11q12.1CV:PGCnp
PMID:cooccur
5936RBM4LARK | RBM4A | ZCCHC21 | ZCRB3ARNA binding motif protein 411q13CV:PGCnp
144097C11orf84-chromosome 11 open reading frame 8411q13.1CV:PGCnp
154810AMOTL1JEAPangiomotin like 111q14.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
54733SLC35F2HSNOV1solute carrier family 35 member F211q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
4312MMP1CLG | CLGNmatrix metallopeptidase 111q22.3PMID:cooccur
4314MMP3CHDS6 | MMP-3 | SL-1 | STMY | STMY1 | STR1matrix metallopeptidase 311q22.3PMID:cooccur
4321MMP12HME | ME | MME | MMP-12matrix metallopeptidase 1211q22.3CV:GWASdb
CV:PGCnp
4162MCAMCD146 | MUC18melanoma cell adhesion molecule11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
7070THY1CD90 | CDw90Thy-1 cell surface antigen11q23.3DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
23310NCAPD3CAP-D3 | CAPD3 | hCAP-D3 | hHCP-6 | hcp-6non-SMC condensin II complex subunit D311q25CV:PGCnp
DNM:McCarthy_2014
1663DDX11CHL1 | CHLR1 | KRG2 | WABSDEAD/H-box helicase 1112p11CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
10059DNM1LDLP1 | DRP1 | DVLP | DYMPLE | EMPF | HDYNIVdynamin 1-like12p11.21CV:GWASdbENDOCYTOSIS
51067YARS2CGI-04 | MLASA2 | MT-TYRRS | TYRRStyrosyl-tRNA synthetase 212p11.21CV:PGCnp
DMG:Wockner_2014
3764KCNJ8KIR6.1 | uKATP-1potassium voltage-gated channel subfamily J member 812p11.23CV:PGCnp
DMG:vanEijk_2014
Expression
EXCITABILITY
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
51026GOLT1BCGI-141 | GCT2 | GOT1 | GOT1B | YMR292Wgolgi transport 1B12p12.1CV:PGCnp
51729WBP11NPWBP | PPP1R165 | SIPP1 | WBP-11WW domain binding protein 1112p12.3CV:PGCnp
11171STRAPMAWD | PT-WD | UNRIPserine/threonine kinase receptor associated protein12p12.3CV:PGCnp
PMID:cooccur
2597GAPDHG3PD | GAPD | HEL-S-162ePglyceraldehyde-3-phosphate dehydrogenase12p13DMG:Wockner_2014
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2120ETV6TEL | TEL/ABL | THC5ETS variant 612p13CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
7167TPI1HEL-S-49 | TIM | TPI | TPIDtriosephosphate isomerase 112p13Expression
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
894CCND2KIAK0002 | MPPH3cyclin D212p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
51202DDX47E4-DBP | HQ0256 | MSTP162 | RRP3DEAD-box helicase 4712p13.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
55110MAGOHBMGN2 | mago | magohmago homolog B, exon junction complex core component12p13.2DMG:Jaffe_2016
9332CD163M130 | MM130CD163 molecule12p13.3CV:PGCnp
DNM:Fromer_2014
Network
PMID:cooccur
CompositeSet
79602ADIPOR2ACDCR2 | PAQR2adiponectin receptor 212p13.31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
84318CCDC77-coiled-coil domain containing 7712p13.33CV:PGCnp
DMG:Jaffe_2016
8835SOCS2CIS2 | Cish2 | SOCS-2 | SSI-2 | SSI2 | STATI2suppressor of cytokine signaling 212qCV:PGCnp
PMID:cooccur
196527ANO6BDPLT7 | SCTS | TMEM16Fanoctamin 612q12CV:PGCnp
196528ARID2BAF200 | p200AT-rich interaction domain 212q12CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
85437ZCRB1MADP-1 | MADP1 | RBM36 | SNRNP31 | ZCCHC19zinc finger CCHC-type and RNA binding motif containing 112q12CV:PGCnp
6472SHMT2GLYA | HEL-S-51e | SHMTserine hydroxymethyltransferase 212q12-q14CV:GWAScat
CV:PGC128
CV:PGCnp
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7024TFCP2LBP1C | LSF | LSF1D | SEF | TFCP2Ctranscription factor CP212q13CV:PGCnp
DMG:Nishioka_2013
4234METTL1C12orf1 | TRM8 | TRMT8 | YDL201wmethyltransferase like 112q13Network
29843SENP1SuPr-2SUMO1/sentrin specific peptidase 112q13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
904CCNT1CCNT | CYCT1 | HIVE1cyclin T112q13.11DMG:Nishioka_2013
Expression
51380CSADCSD | PCAPcysteine sulfinic acid decarboxylase12q13.11-q14.3CV:PGCnp
DMG:Wockner_2014
65244SPATS2Nbla00526 | P59SCR | SCR59 | SPATA10spermatogenesis associated serine rich 212q13.12CV:PGCnp
DMG:Jaffe_2016
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
23468CBX5HEL25 | HP1 | HP1Achromobox 512q13.13CV:PGCnp
DNM:Gulsuner_2013
1431CS-citrate synthase12q13.2CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
85406DNAJC14DNAJ | DRIP78 | HDJ3 | LIP6DnaJ heat shock protein family (Hsp40) member C1412q13.2CV:PGCnp
DMG:Jaffe_2016
Network
5036PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G412q13.2CV:PGCnp
DMG:Wockner_2014
Network
4141MARSCMT2U | ILFS2 | ILLD | METRS | MRS | MTRNS | SPG70methionyl-tRNA synthetase12q13.3CV:PGCnp
Network
PMID:cooccur
3225HOXC9HOX3 | HOX3Bhomeobox C912q13.3DMG:Jaffe_2016
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
55832CAND1TIP120 | TIP120Acullin-associated and neddylation-dissociated 112q14CV:GWASdb
CV:PGCnp
RNA AND PROTEIN SYNTHESIS
CompositeSet
Darnell FMRP targets
11260XPOTXPO3exportin for tRNA12q14.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
10330CNPY2HP10390 | MSAP | TMEM4 | ZSIG9canopy FGF signaling regulator 212q15CV:PGCnp
4848CNOT2CDC36 | HSPC131 | NOT2 | NOT2HCCR4-NOT transcription complex subunit 212q15CV:PGCnp
DMG:Wockner_2014
5074PAWRPAR4 | Par-4pro-apoptotic WT1 regulator12q21Association
CV:PGCnp
PMID:cooccur
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
29080CCDC59BR22 | HSPC128 | TAP26coiled-coil domain containing 5912q21.31CV:PGCnp
DMG:Jaffe_2016
28977MRPL42HSPC204 | L31MT | L42MT | MRP-L31 | MRP-L42 | MRP-S32 | MRPL31 | MRPS32 | PTD007 | RPML31 | S32MTmitochondrial ribosomal protein L4212q22CV:PGCnp
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
283431GAS2L3G2L3growth arrest specific 2 like 312q23.1CV:PGCnp
DMG:Nishioka_2013
121441NEDD1GCP-WD | TUBGCP7neural precursor cell expressed, developmentally down-regulated 112q23.1CV:PGCnp
DMG:Wockner_2014
121457IKBIPIKIPIKBKB interacting protein12q23.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
79023NUP37p37nucleoporin 37kDa12q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
4801NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y subunit beta12q23.3CV:PGCnp
DMG:Jaffe_2016
10970CKAP4CLIMP-63 | ERGIC-63 | p63cytoskeleton-associated protein 412q23.3CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
121053C12orf45-chromosome 12 open reading frame 4512q23.3CV:PGCnp
DMG:Jaffe_2016
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
8315BRAPBRAP2 | IMP | RNF52BRCA1 associated protein12q24CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
6128RPL6L6 | SHUJUN-2 | TAXREB107 | TXREB1ribosomal protein L612q24.1CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
121642ALKBH2ABH2alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase12q24.11CV:PGCnp
51434ANAPC7APC7anaphase promoting complex subunit 712q24.11CV:PGCnp
51184GPN3ATPBD1CGPN-loop GTPase 312q24.11CV:PGCnp
80018NAA25C12orf30 | MDM20 | NAP1N(alpha)-acetyltransferase 25, NatB auxiliary subunit12q24.13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
10645CAMKK2CAMKK | CAMKKBcalcium/calmodulin-dependent protein kinase kinase 212q24.2CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
6175RPLP0L10E | LP0 | P0 | PRLP0 | RPP0ribosomal protein lateral stalk subunit P012q24.2DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4940OAS3p100 | p100OAS2'-5'-oligoadenylate synthetase 312q24.2CV:PGCnp
DMG:Wockner_2014
5901RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family12q24.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
9735KNTC1RODkinetochore associated 112q24.31CV:PGCnp
353116RILPL1GOSPEL | RLP1Rab interacting lysosomal protein-like 112q24.31CV:PGCnp
8562DENRDRP | DRP1 | SMAP-3density-regulated protein12q24.31CV:PGCnp
DMG:Jaffe_2016
56616DIABLODFNA64 | SMACdiablo IAP-binding mitochondrial protein12q24.31CV:PGCnp
DMG:Wockner_2014
51433ANAPC5APC5anaphase promoting complex subunit 512q24.31CV:PGCnp
DNM:Fromer_2014
CompositeSet
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
91574C12orf65COXPD7 | SPG55chromosome 12 open reading frame 6512q24.31CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
LK:YES
7637ZNF84HPF2zinc finger protein 8412q24.33DMG:Jaffe_2016
23141ANKLE2KIAA0692 | LEMD7 | Lem4 | MCPH16ankyrin repeat and LEM domain containing 212q24.33CV:PGCnp
DMG:Wockner_2014
26278SACSARSACS | DNAJC29 | PPP1R138 | SPAX6sacsin molecular chaperone13q12CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
26586CKAP2LB1 | TMAP | se20-10cytoskeleton associated protein 213q14CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
27253PCDH17PCDH68 | PCH68protocadherin 1713q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7546ZIC2HPE5Zic family member 213q32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
3843IPO5IMB3 | KPNB3 | Pse1 | RANBP5 | imp5importin 513q32.2Association
CV:PGCnp
DMG:Jaffe_2016
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
1948EFNB2EPLG5 | HTKL | Htk-L | LERK5ephrin-B213q33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
79070KDELC1EP58 | ERp58 | KDEL1KDEL motif containing 113q33CV:PGCnp
DMG:Nishioka_2013
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
1284COL4A2ICH | POREN2collagen type IV alpha 213q34CV:GWAScat
CV:GWASdb
CV:PGCnp
3183HNRNPCC1 | C2 | HNRNP | HNRPC | SNRPCheterogeneous nuclear ribonucleoprotein C (C1/C2)14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
Potential synaptic genes
80821DDHD1PA-PLA1 | PAPLA1 | SPG28DDHD domain containing 114q21CV:PGCnpAscano FMRP targets
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
122769LRR14-1BBLRR | LRR-1 | PPIL5leucine rich repeat protein 114q21.3CV:PGCnp
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
4734NEDD4NEDD4-1 | RPF1neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase15qCV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7337UBE3AANCR | AS | E6-AP | EPVE6AP | HPVE6Aubiquitin protein ligase E3A15q11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
26585GREM1C15DUPq | CKTSF1B1 | CRAC1 | CRCS4 | DAND2 | DRM | DUP15q | GREMLIN | HMPS | HMPS1 | IHG-2 | MPSH | PIG2gremlin 1, DAN family BMP antagonist15q13.3CNV:YES
CV:PGCnp
GO_Annotation
27229TUBGCP476P | GCP-4 | GCP4 | Grip76 | MCCRP3tubulin gamma complex associated protein 415q15CV:PGCnp
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
11339OIP55730547N13Rik | CT86 | LINT-25 | MIS18B | MIS18beta | hMIS18betaOpa interacting protein 515q15.1CV:PGCnp
DNM:Fromer_2014
440275EIF2AK4GCN2 | PVOD2eukaryotic translation initiation factor 2 alpha kinase 415q15.1CV:PGCnp
PMID:cooccur
51496CTDSPL2HSPC058 | HSPC129CTD small phosphatase like 215q15.3-q21.1CV:PGCnp
8669EIF3JEIF3S1 | eIF3-alpha | eIF3-p35eukaryotic translation initiation factor 3 subunit J15q21.1CV:PGCnp
DMG:Jaffe_2016
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
22995CEP152MCPH4 | MCPH9 | SCKL5centrosomal protein 152kDa15q21.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
2200FBN1ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2fibrillin 115q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
2553GABPB1BABPB2 | E4TF1 | E4TF1-47 | E4TF1-53 | E4TF1B | GABPB | GABPB-1 | GABPB2 | NRF2B1 | NRF2B2GA binding protein transcription factor beta subunit 115q21.2CV:PGCnp
DMG:Jaffe_2016
10776ARPP19ARPP-16 | ARPP-19 | ARPP16 | ENSALcAMP regulated phosphoprotein 19kDa15q21.2CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
Expression
GO_Annotation
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
197021LCTLKLG | KLPHlactase like15q22.31CV:PGCnp
DMG:Wockner_2014
84191FAM96A-family with sequence similarity 96 member A15q22.31CV:PGCnp
Expression
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10363HMG20AHMGX1 | HMGXB1high mobility group 20A15q24CV:PGCnp
PMID:cooccur
9915ARNT2WEDAS | bHLHe1aryl hydrocarbon receptor nuclear translocator 215q24CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
53346TM6SF1-transmembrane 6 superfamily member 115q24-q26CV:PGCnp
400410ST20HCCS-1suppressor of tumorigenicity 2015q25.1CV:PGCnp
DMG:Wockner_2014
5685PSMA4HC9 | HsT17706 | PSC9proteasome subunit alpha 415q25.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
50810HDGFRP3CGI-142 | HDGF-2 | HDGF2 | HRP-3hepatoma-derived growth factor, related protein 315q25.2CV:PGCnp
DMG:Wockner_2014
55215FANCIKIAA1794Fanconi anemia complementation group I15q26.1CV:PGCnpAscano FMRP targets
64782AENISG20L1 | pp12744apoptosis enhancing nuclease15q26.1CV:PGCnp
91433RCCD1-RCC1 domain containing 115q26.1CV:PGCnp
9055PRC1ASE1protein regulator of cytokinesis 115q26.1CV:PGCnp
5046PCSK6PACE4 | SPC4proprotein convertase subtilisin/kexin type 615q26.3CV:PGCnp
GO_Annotation
PMID:cooccur
6210RPS15AS15aribosomal protein S15a16pCV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
2521FUSALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLSFUS RNA binding protein16p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
54700RRN3A-270G1.2 | TIFIARRN3 homolog, RNA polymerase I transcription factor16p12CV:PGCnp
GSMA_IIE
6340SCNN1GBESC3 | ENaCg | ENaCgamma | PHA1 | SCNEGsodium channel epithelial 1 gamma subunit16p12CV:PGCnp
GSMA_IIE
124454EARS2COXPD12 | MSE1 | gluRSglutamyl-tRNA synthetase 2, mitochondrial16p12.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIE
79728PALB2FANCN | PNCA3partner and localizer of BRCA216p12.2CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIE
PMID:cooccur
10261IGSF6DORAimmunoglobulin superfamily member 616p12.2CV:PGCnp
GSMA_IIE
57478USP31-ubiquitin specific peptidase 3116p12.2CV:GWASdb
CV:PGCnp
GSMA_IIE
23049SMG161E3.4 | ATX | LIPSMG1 phosphatidylinositol 3-kinase-related kinase16p12.3CV:GWASdb
CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
123803NTAN1PNAA | PNADN-terminal asparagine amidase16p13.11CV:PGCnp
GSMA_IIE
PMID:cooccur
54820NDE1HOM-TES-87 | LIS4 | MHAC | NDE | NUDE | NUDE1nudE neurodevelopment protein 116p13.11CNV:YES
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
116028RMI2BLAP18 | C16orf75RecQ mediated genome instability 216p13.13CV:PGCnp
CV:PheWAS
8651SOCS1CIS1 | CISH1 | JAB | SOCS-1 | SSI-1 | SSI1 | TIP3suppressor of cytokine signaling 116p13.13CV:PGCnp
DMG:Nishioka_2013
10921RNPS1E5.1RNA binding protein S1, serine-rich domain16p13.3CV:PGCnp
DMG:Nishioka_2013
9093DNAJA3HCA57 | TID1 | hTID-1DnaJ heat shock protein family (Hsp40) member A316p13.3CV:GWASdb
CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
10131TRAP1HSP 75 | HSP75 | HSP90L | TRAP-1TNF receptor-associated protein 116p13.3CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
57465TBC1D24DFNA65 | DFNB86 | DOORS | EIEE16 | FIME | TLDC6TBC1 domain family member 2416p13.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
23594ORC6ORC6Lorigin recognition complex subunit 616q12CV:PGCnp
GSMA_IIE
51659GINS2HSPC037 | PSF2 | Pfs2GINS complex subunit 2 (Psf2 homolog)16q24.1CV:PGCnp
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
56953NT5MdNT-2 | dNT2 | mdN5',3'-nucleotidase, mitochondrial17p11.2CV:PGCnp
DMG:Jaffe_2016
5376PMP22CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110peripheral myelin protein 2217p12CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
84316NAA38LSMD1 | PFAAP2N(alpha)-acetyltransferase 38, NatC auxiliary subunit17p13.1CV:PGCnp
DMG:Jaffe_2016
54478FAM64ACATS | RCS1family with sequence similarity 64 member A17p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
56919DHX33DDX33DEAH-box helicase 3317p13.2CV:PGCnpAscano FMRP targets
708C1QBPGC1QBP | HABP1 | SF2p32 | gC1Q-R | gC1qR | p32complement component 1, q subcomponent binding protein17p13.3CV:PGCnp
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
55720TSR1-TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)17p13.3CV:PGCnp
DMG:Jaffe_2016
11232POLG2HP55 | MTPOLB | PEOA4 | POLB | POLG-BETA | POLGBpolymerase (DNA) gamma 2, accessory subunit17qCV:PGCnp
DMG:Jaffe_2016
23531MMDMMA | MMD1 | PAQR11monocyte to macrophage differentiation-associated17qCV:PGCnp
PMID:cooccur
6355CCL8HC14 | MCP-2 | MCP2 | SCYA10 | SCYA8C-C motif chemokine ligand 817q11.2CV:PGCnp
PMID:cooccur
6357CCL13CKb10 | MCP-4 | NCC-1 | NCC1 | SCYA13 | SCYL1C-C motif chemokine ligand 1317q11.2PMID:cooccur
642BLMHBH | BMHbleomycin hydrolase17q11.2CV:PGCnp
7756ZNF207BuGZ | hBuGZzinc finger protein 20717q11.2CV:PGCnp
23512SUZ12CHET9 | JJAZ1SUZ12 polycomb repressive complex 2 subunit17q11.2CV:PGCnp
DMG:Nishioka_2013
Chromatin Remodeling Genes
55813UTP6C17orf40 | HCA66UTP6, small subunit processome component17q11.2CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
4763NF1NFNS | VRNF | WSSneurofibromin 117q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6347CCL2GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CFC-C motif chemokine ligand 217q11.2-q12CV:PGCnp
Expression
PMID:cooccur
6351CCL4ACT2 | AT744.1 | G-26 | HC21 | LAG-1 | LAG1 | MIP-1-beta | MIP1B | MIP1B1 | SCYA2 | SCYA4C-C motif chemokine ligand 417q12CV:PGCnp
PMID:cooccur
26574AATFBFR2 | CHE-1 | CHE1 | DEDapoptosis antagonizing transcription factor17q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
51755CDK12CRK7 | CRKR | CRKRScyclin-dependent kinase 1217q12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
284098PIGWGwt1 | HPMRS5phosphatidylinositol glycan anchor biosynthesis class W17q12CNV:YES
CV:PGCnp
80179MYO19MYOHD1myosin XIX17q12CNV:YES
CV:PGCnp
Ascano FMRP targets
5691PSMB3HC10-IIproteasome subunit beta 317q12CV:PGCnp
Network
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
5245PHBHEL-215 | HEL-S-54e | PHB1prohibitin17q21CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9570GOSR2Bos1 | EPM6 | GS27golgi SNAP receptor complex member 217q21CV:PGCnp
11056DDX52HUSSY19 | ROK1DEAD-box helicase 5217q21.1CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
6605SMARCE1BAF57SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 117q21.2CV:PGCnp
Network
PMID:cooccur
Chromatin Remodeling Genes
4830NME1AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1NME/NM23 nucleoside diphosphate kinase 117q21.3CV:PGCnpCELL METABOLISM
CompositeSet
65264UBE2ZHOYS7 | USE1ubiquitin conjugating enzyme E2 Z17q21.32CV:PGCnp
10951CBX1CBX | HP1-BETA | HP1Hs-beta | HP1Hsbeta | M31 | MOD1 | p25betachromobox 117q21.32CV:PGCnp
996CDC27ANAPC3 | APC3 | CDC27Hs | D0S1430E | D17S978E | H-NUC | HNUC | NUC2cell division cycle 2717q21.32CV:PGCnp
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
51096UTP18CGI-48 | WDR50UTP18, small subunit processome component17q21.33CV:PGCnp
DMG:Wockner_2014
51649MRPS23CGI-138 | HSPC329 | MRP-S23mitochondrial ribosomal protein S2317q22CV:PGCnp
DMG:Jaffe_2016
9110MTMR4FYVE-DSP2 | ZFYVE11myotubularin related protein 417q22CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5889RAD51CBROVCA3 | FANCO | R51H3 | RAD51L2RAD51 paralog C17q22CV:PGCnp
DMG:Wockner_2014
55771PRR11-proline rich 1117q22CV:PGCnp
Expression
83990BRIP1BACH1 | FANCJ | OFBRCA1 interacting protein C-terminal helicase 117q22.2CV:PGCnp
DMG:Nishioka_2013
51651PTRH2BIT1 | CFAP37 | CGI-147 | IMNEPD | PTH | PTH 2 | PTH2peptidyl-tRNA hydrolase 217q23.1DMG:Jaffe_2016
6752SSTR2-somatostatin receptor 217q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
25926NOL11-nucleolar protein 1117q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
79902NUP85FROUNT | Nup75nucleoporin 85kDa17q25.1CV:PGCnp
DMG:Jaffe_2016
57674RNF213ALO17 | C17orf27 | KIAA1618 | MYMY2 | MYSTR | NET57ring finger protein 21317q25.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
84733CBX2CDCA6 | M33 | SRXY5chromobox 217q25.3CV:GWASdb
CV:PGCnp
Expression
Ascano FMRP targets
Chromatin Remodeling Genes
162655ZNF519HsT2362zinc finger protein 51918p11.21CV:PGCnp
DMG:Jaffe_2016
81929SEH1LSEC13L | SEH1A | SEH1B | Seh1SEH1 like nucleoporin18p11.21CV:PGCnp
DMG:Wockner_2014
57045TWSG1TSGtwisted gastrulation BMP signaling modulator 118p11.3CV:PGCnp
GO_Annotation
91133L3MBTL4HsT1031l(3)mbt-like 4 (Drosophila)18p11.31CV:PGCnpAscano FMRP targets
645369TMEM200CTTMAtransmembrane protein 200C18p11.31CV:PGCnp
DMG:Wockner_2014
9097USP14TGTubiquitin specific peptidase 1418p11.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
23136EPB41L34.1B | DAL-1 | DAL1erythrocyte membrane protein band 4.1-like 318p11.32CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9984THOC1HPR1 | P84 | P84N5THO complex 118p11.32CV:PGCnp
DMG:Wockner_2014
9331B4GALT6B4Gal-T6 | beta4Gal-T6UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 618q11CV:PGCnp
PMID:cooccur
114876OSBPL1AORP-1 | ORP1 | OSBPL1Boxysterol binding protein like 1A18q11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2627GATA6-GATA binding protein 618q11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4864NPC1NPCNiemann-Pick disease, type C118q11.2PMID:cooccur
5932RBBP8COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2retinoblastoma binding protein 818q11.2CV:PGCnp
DMG:Jaffe_2016
6875TAF4BSPGF13 | TAF2C2 | TAFII105TATA-box binding protein associated factor 4b18q11.2CV:PGCnp
DMG:Wockner_2014
55197RPRD1AHsT3101 | P15RSregulation of nuclear pre-mRNA domain containing 1A18q12.2CV:PGCnp
25800SLC39A6LIV-1 | ZIP6solute carrier family 39 member 618q12.2CV:PGCnp
83608C18orf21HsT3108 | PNAS-124 | PNAS-131 | XTP13chromosome 18 open reading frame 2118q12.2CV:PGCnp
4200ME2ODS1malic enzyme 2, NAD(+)-dependent, mitochondrial18q21CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
494470RNF165ARKL2 | RNF111L2ring finger protein 16518q21.1CV:PGCnp
DMG:Wockner_2014
3998LMAN1ERGIC-53 | ERGIC53 | F5F8D | FMFD1 | MCFD1 | MR60 | gp58lectin, mannose binding 118q21.3-q22CV:GWASdb
CV:PGCnp
55205ZNF532-zinc finger protein 53218q21.32CV:PGCnp
DNM:Fromer_2014
CompositeSet
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
22850ADNP2ZNF508ADNP homeobox 218q23CV:PGCnp
PMID:cooccur
10907TXNL4ABMKS | DIB1 | DIM1 | SNRNP15 | TXNL4 | U5-15kDthioredoxin like 4A18q23CV:PGCnp
163227ZNF100-zinc finger protein 10019p12CV:PGCnp
57693ZNF317-zinc finger protein 31719p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
1994ELAVL1ELAV1 | HUR | Hua | MelGELAV like RNA binding protein 119p13.2CV:PGCnp
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
6597SMARCA4BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2bSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 419p13.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
3383ICAM1BB2 | CD54 | P3.58intercellular adhesion molecule 119p13.2CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:McCarthy_2014
10036CHAF1ACAF-1 | CAF1 | CAF1B | CAF1P150 | P150chromatin assembly factor 1 subunit A19p13.3CV:PGCnp
DMG:Wockner_2014
Network
29128UHRF1ICBP90 | Np95 | RNF106 | TDRD22 | hNP95 | hUHRF1 | huNp95ubiquitin like with PHD and ring finger domains 119p13.3CV:PGCnp
DMG:Wockner_2014
8570KHSRPFBP2 | FUBP2 | KSRPKH-type splicing regulatory protein19p13.3CV:PGCnp
DMG:Wockner_2014
6209RPS15RIG | S15ribosomal protein S1519p13.3DMG:Nishioka_2013G2Cdb.humanPSD
G2Cdb.humanPSP
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
10452TOMM40C19orf1 | D19S1177E | PER-EC1 | PEREC1 | TOM40translocase of outer mitochondrial membrane 4019q13PMID:cooccur
7705ZNF146OZFzinc finger protein 14619q13.1CV:PGCnp
558AXLARK | JTK11 | Tyro7 | UFOAXL receptor tyrosine kinase19q13.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
56915EXOSC5RRP41B | RRP46 | Rrp46p | hRrp46p | p12Bexosome component 519q13.1CV:PGCnp
6626SNRPAMud1 | U1-A | U1Asmall nuclear ribonucleoprotein polypeptide A19q13.1CV:PGCnp
DMG:Jaffe_2016
9141PDCD5TFAR19programmed cell death 519q13.11CV:PGCnp
DMG:Nishioka_2013
163081ZNF567-zinc finger protein 56719q13.12CV:PGCnp
7305TYROBPDAP12 | KARAP | PLOSLTYRO protein tyrosine kinase binding protein19q13.12PMID:cooccur
284323ZNF780AZNF780zinc finger protein 780A19q13.2CV:PGCnp
22809ATF5ATFX | HMFN0395activating transcription factor 519q13.3CV:PGCnp
PMID:cooccur
3276PRMT1ANM1 | HCP1 | HRMT1L2 | IR1B4protein arginine methyltransferase 119q13.3CV:PGCnpChromatin Remodeling Genes
8605PLA2G4CCPLA2-gammaphospholipase A2 group IVC19q13.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
126129CPT1CCATL1 | CPT1-B | CPT1P | CPTI-B | CPTIC | SPG73carnitine palmitoyltransferase 1C19q13.33CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
2359FPR3FML2_HUMAN | FMLP-R-II | FMLPY | FPRH1 | FPRH2 | FPRL2 | RMLP-R-Iformyl peptide receptor 319q13.41CV:PGCnp
11338U2AF2U2AF65U2 small nuclear RNA auxiliary factor 219q13.42CV:PGCnp
DMG:Jaffe_2016
Network
284306ZNF547-zinc finger protein 54719q13.43CV:PGCnp
DMG:Jaffe_2016
26227PHGDH3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERAphosphoglycerate dehydrogenase1p12CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
90874ZNF697-zinc finger protein 6971p12CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
6566SLC16A1HHF7 | MCT | MCT1 | MCT1Dsolute carrier family 16 member 11p12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
64783RBM15OTT | OTT1 | SPENRNA binding motif protein 151p13CV:PGCnp
GSMA_I
4893NRASALPS4 | CMNS | N-ras | NCMS | NRAS1 | NS6neuroblastoma RAS viral (v-ras) oncogene homolog1p13.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
140ADORA3A3ARadenosine A3 receptor1p13.2CV:PGCnp
GSMA_I
PMID:cooccur
80143SIKE1SIKEsuppressor of IKBKE 11p13.2CV:PGCnp
29899GPSM2CMCS | DFNB82 | LGN | PINSG-protein signaling modulator 21p13.3CV:PGCnp
DMG:Wockner_2014
Network
Potential synaptic genes
163786SASS6MCPH14 | SAS-6 | SAS6SAS-6 centriolar assembly protein1p21.2CV:PGCnp
DMG:Jaffe_2016
148867SLC30A7ZNT7 | ZnT-7 | ZnTL2solute carrier family 30 member 71p21.2CV:PGCnp
CV:PheWAS
ION BALANCE
51611DPH5AD-018 | CGI-30 | HSPC143 | NPD015diphthamide biosynthesis 51p21.2CV:PGCnp
DMG:Nishioka_2013
58155PTBP2PTBLP | brPTB | nPTBpolypyrimidine tract binding protein 21p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
2633GBP1-guanylate binding protein 11p22.2CV:PGCnp
PMID:cooccur
115361GBP4Mpa2guanylate binding protein 41p22.2DEG:Sanders_2013
5876RABGGTBGGTBRab geranylgeranyltransferase beta subunit1p31CV:PGCnp
DEG:Maycox_2009
GSMA_IIA
26009ZZZ3ATAC1zinc finger ZZ-type containing 31p31.1CV:PGCnp
GSMA_IIA
55631LRRC40dJ677H15.1leucine rich repeat containing 401p31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
10964IFI44LC1orf29 | GS3686interferon induced protein 44 like1p31.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
10561IFI44MTAP44 | TLDC5 | p44interferon induced protein 441p31.1CV:PGCnp
GSMA_IIA
55635DEPDC1DEP.8 | DEPDC1-V2 | DEPDC1A | SDP35DEP domain containing 11p31.2CV:PGCnp
DMG:Nishioka_2013
Expression
GSMA_IIA
85440DOCK7EIEE23 | ZIR2dedicator of cytokinesis 71p31.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
84251SGIP1-SH3-domain GRB2-like (endophilin) interacting protein 11p31.3CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
55624POMGNT1GNTI.2 | GnT I.2 | LGMD2O | MEB | MGAT1.2 | gnT-I.2protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)1p34.1DMG:vanEijk_2014
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7388UQCRHQCR6 | UQCR8ubiquinol-cytochrome c reductase hinge protein1p34.1CV:PGCnp
5690PSMB2HC7-Iproteasome subunit beta 21p34.2CV:PGCnp
PMID:cooccur
149175MANEAL-mannosidase endo-alpha like1p34.3CV:PGCnp
10946SF3A3PRP9 | PRPF9 | SAP61 | SF3a60splicing factor 3a subunit 31p34.3CV:PGCnp
54955C1orf109-chromosome 1 open reading frame 1091p34.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8565YARSCMTDIC | TYRRS | YRS | YTStyrosyl-tRNA synthetase1p35.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
64766S100PBPS100PBPRS100P binding protein1p35.1CV:PGCnp
85028SNHG12ASLNC04080 | C1orf79 | LINC00100 | NCRNA00100small nucleolar RNA host gene 121p35.3CV:PGCnp
2048EPHB2CAPB | DRT | EK5 | EPHT3 | ERK | Hek5 | PCBC | Tyro5EPH receptor B21p36.1-p35CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Potential synaptic genes
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
79140CCDC28B-coiled-coil domain containing 28B1p36.11-p34.2CV:PGCnp
DMG:vanEijk_2014
713C1QB-complement component 1, q subcomponent, B chain1p36.12CV:PGCnp
PMID:cooccur
55920RCC2TD-60regulator of chromosome condensation 21p36.13CV:PGCnp
DMG:Wockner_2014
2023ENO1ENO1L1 | HEL-S-17 | MPB1 | NNE | PPHenolase 1, (alpha)1p36.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23261CAMTA1CANPMRcalmodulin binding transcription activator 11p36.31-p36.23CV:PGCnp
DNM:McCarthy_2014
CompositeSet
Darnell FMRP targets
54998AURKAIP1AIP | AKIP | MRP-S38aurora kinase A interacting protein 11p36.33DMG:Wockner_2014
10712FAM189BC1orf2 | COTE1family with sequence similarity 189 member B1q21CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GSMA_I
GSMA_IIA
653519GPR89AGPHR | GPR89 | GPR89B | SH120 | UNQ192G protein-coupled receptor 89A1q21.1CNV:YES
GSMA_I
GSMA_IIA
1163CKS1BCKS1 | PNAS-16 | PNAS-18 | ckshs1CDC28 protein kinase regulatory subunit 1B1q21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
10262SF3B4AFD1 | Hsh49 | SAP49 | SF3b49splicing factor 3b subunit 41q21.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
80308FLAD1FAD1 | FADS | PP591flavin adenine dinucleotide synthetase 11q21.3DMG:vanEijk_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
103ADARADAR1 | AGS6 | DRADA | DSH | DSRAD | G1P1 | IFI-4 | IFI4 | K88DSRBP | P136adenosine deaminase, RNA-specific1q21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
4332MNDAPYHIN3myeloid cell nuclear differentiation antigen1q22CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
2215FCGR3BCD16 | CD16b | FCG3 | FCGR3 | FCR-10 | FCRIII | FCRIIIbFc fragment of IgG receptor IIIb1q23CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
CompositeSet
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
2212FCGR2ACD32 | CD32A | CDw32 | FCG2 | FCGR2 | FCGR2A1 | FcGR | IGFR2Fc fragment of IgG receptor IIa1q23CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIA
79590MRPL24L24mt | MRP-L18 | MRP-L24mitochondrial ribosomal protein L241q23.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
261726TIPRLTIP | TIP41TOR signaling pathway regulator1q23.2CV:PGCnp
DMG:Jaffe_2016
57216VANGL2LPP1 | LTAP | STB1 | STBM | STBM1VANGL planar cell polarity protein 21q23.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
5202PFDN2PFD2prefoldin subunit 21q23.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
5999RGS4RGP4 | SCZD9regulator of G-protein signaling 41q23.3Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
GSMA_IIA
Network
PMID:cooccur
Potential synaptic genes
27101CACYBPGIG5 | PNAS-107 | S100A6BP | SIPcalcyclin binding protein1q24-q25CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
55827DCAF61200006M05Rik | ARCAP | IQWD1 | MSTP055 | NRIP | PC326DDB1 and CUL4 associated factor 61q24.2CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
9019MPZL1MPZL1b | PZR | PZR1b | PZRa | PZRbmyelin protein zero like 11q24.2Association
CV:PGCnp
PMID:cooccur
80896NPLC112 | C1orf13 | NAL | NPL1N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)1q25CV:GWASdb
CV:PGCnp
PMID:cooccur
5743PTGS2COX-2 | COX2 | GRIPGHS | PGG/HS | PGHS-2 | PHS-2 | hCox-2prostaglandin-endoperoxide synthase 21q25.2-q25.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
10228STX6-syntaxin 61q25.3CV:PGCnp
CV:PheWAS
DEG:Sanders_2013
INTRACELLULAR TRAFFICKING
259266ASPMASP | Calmbp1 | MCPH5abnormal spindle microtubule assembly1q31CV:PGCnp
GO_Annotation
PMID:cooccur
51377UCHL5CGI-70 | INO80R | UCH-L5 | UCH37ubiquitin C-terminal hydrolase L51q32CV:PGCnp
DMG:Jaffe_2016
59349KLHL12C3IP1 | DKIRkelch like family member 121q32.1DMG:Jaffe_2016
Network
55705IPO9Imp9importin 91q32.1CV:PGCnp
DMG:Jaffe_2016
9877ZC3H11AZC3HDC11Azinc finger CCCH-type containing 11A1q32.1CV:PGCnp
DMG:Wockner_2014
1116CHI3L1ASRT7 | CGP-39 | GP-39 | GP39 | HC-gp39 | HCGP-3P | YKL-40 | YKL40 | YYL-40 | hCGP-39chitinase 3 like 11q32.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
PMID:cooccur
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
89796NAV1POMFIL3 | STEERIN1 | UNC53H1neuron navigator 11q32.3CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
90806ANGEL2Ccr4d | KIAA0759Langel homolog 2 (Drosophila)1q32.3DMG:Nishioka_2013
4139MARK1MARK | Par-1c | Par1cmicrotubule affinity regulating kinase 11q41CV:PGCnp
PMID:cooccur
2058EPRSEARS | GLUPRORS | PARS | PIG32 | QARS | QPRSglutamyl-prolyl-tRNA synthetase1q41GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
64853AIDAC1orf80axin interactor, dorsalization associated1q41CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
PMID:cooccur
2590GALNT2GalNAc-T2polypeptide N-acetylgalactosaminyltransferase 21q41-q42CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9015TAF1AMGC:17061 | RAFI48 | SL1 | TAFI48TATA-box binding protein associated factor, RNA polymerase I subunit A1q42CV:PGCnp
DMG:Jaffe_2016
7107GPR137BTM7SF1G protein-coupled receptor 137B1q42-q43CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
54583EGLN1C1orf12 | ECYT3 | HALAH | HIF-PH2 | HIFPH2 | HPH-2 | HPH2 | PHD2 | SM20 | ZMYND6egl-9 family hypoxia-inducible factor 11q42.1CV:PGCnp
PMID:cooccur
29097CNIH4CNIH-4 | HSPC163cornichon family AMPA receptor auxiliary protein 41q42.11CV:PGCnp
Expression
23219FBXO28CENP-30 | Fbx28F-box protein 281q42.11CV:PGCnp
116841SNAP47C1orf142 | ESFI5812 | HEL-S-290 | HEL170 | SNAP-47 | SVAP1synaptosome associated protein 47kDa1q42.13CV:PGCnp
DMG:Wockner_2014
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9816URB2KIAA0133 | NET10 | NPA2URB2 ribosome biogenesis 2 homolog (S. cerevisiae)1q42.13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
128061C1orf131-chromosome 1 open reading frame 1311q42.2CV:PGCnp
DMG:Jaffe_2016
84284NTPCRC1orf57 | HCR-NTPasenucleoside-triphosphatase, cancer-related1q42.2CV:PGCnp
23029RBM34-RNA binding motif protein 341q42.3DMG:Jaffe_2016
4811NID1NIDnidogen 11q43CV:GWASdb
CV:PGCnp
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
4548MTRHMAG | MS | cblG5-methyltetrahydrofolate-homocysteine methyltransferase1q43Association
CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
10806SDCCAG8BBS16 | CCCAP | CCCAP SLSN7 | HSPC085 | NPHP10 | NY-CO-8 | SLSN7 | hCCCAPserologically defined colon cancer antigen 81q43CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Wockner_2014
LK:YES
PMID:cooccur
64216TFB2MHkp1 | mtTFB2transcription factor B2, mitochondrial1q44CV:PGCnp
DMG:Jaffe_2016
7678ZNF124HZF-16 | HZF16 | ZK7zinc finger protein 1241q44CV:GWAScat
CV:PGCnp
3192HNRNPUHNRNPU-AS1 | HNRPU | SAF-A | SAFA | U21.1 | hnRNP Uheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)1q44DMG:Jaffe_2016
25909AHCTF1ELYS | MST108 | MSTP108 | TMBS62AT-hook containing transcription factor 11q44CV:PGCnp
10000AKT3MPPH | MPPH2 | PKB-GAMMA | PKBG | PRKBG | RAC-PK-gamma | RAC-gamma | STK-2v-akt murine thymoma viral oncogene homolog 31q44CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
10741RBBP9BOG | RBBP10retinoblastoma binding protein 920p11.2CV:PGCnp
GSMA_I
84515MCM8C20orf154 | POF10 | dJ967N21.5minichromosome maintenance 8 homologous recombination repair factor20p12.3CV:PGCnp
CV:PheWAS
2280FKBP1AFKBP-12 | FKBP-1A | FKBP1 | FKBP12 | PKC12 | PKCI2 | PPIASEFK506 binding protein 1A20p13NetworkRNA AND PROTEIN SYNTHESIS
5621PRNPASCR | AltPrP | CD230 | CJD | GSS | KURU | PRIP | PrP | PrP27-30 | PrP33-35C | PrPc | p27-30prion protein20p13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
5111PCNAATLD2proliferating cell nuclear antigen20pter-p12Network
PMID:cooccur
22919MAPRE1EB1microtubule associated protein RP/EB family member 120q11.1-q11.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
8894EIF2S2EIF2 | EIF2B | EIF2beta | PPP1R67 | eIF-2-betaeukaryotic translation initiation factor 2 subunit beta20q11.2CV:PGCnp
Network
Ascano FMRP targets
5933RBL1CP107 | PRB1 | p107retinoblastoma-like 120q11.2CV:PGCnp
DMG:Jaffe_2016
191AHCYSAHH | adoHcyaseadenosylhomocysteinase20q11.22CV:PGCnp
DMG:Wockner_2014
Network
60436TGIF2-TGFB induced factor homeobox 220q11.23CV:PGCnp
DMG:Wockner_2014
6714SRCASV | SRC1 | c-SRC | p60-SrcSRC proto-oncogene, non-receptor tyrosine kinase20q12-q13CV:PGCnp
Network
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
6185RPN2RIBIIR | RPN-II | RPNII | SWP1ribophorin II20q12-q13.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1434CSE1LCAS | CSE1 | XPO2CSE1 chromosome segregation 1-like (yeast)20q13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
100ADA-adenosine deaminase20q13.12CV:PGCnp
Network
PMID:cooccur
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
23394ADNPADNP1 | HVDAS | MRD28activity-dependent neuroprotector homeobox20q13.13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
6227RPS21HLDF | S21ribosomal protein S2120q13.3CV:PGCnp
DMG:Nishioka_2013
149775GNAS-AS1GNAS-AS | GNAS1AS | GNASAS | NCRNA00075 | NESP-AS | NESPAS | SANGGNAS antisense RNA 120q13.32CV:PGCnp
8675STX16SYN16syntaxin 1620q13.32CV:PGCnp
GO_Annotation
INTRACELLULAR TRAFFICKING
10950BTG3ANA | TOB5 | TOB55 | TOFABTG family member 321q21.1CV:PGCnp
DMG:Jaffe_2016
29980DONSONB17 | C21orf60downstream neighbor of SON21q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
PMID:cooccur
10069RWDD2BC21orf6 | GL011RWD domain containing 2B21q22.11CV:PGCnp
DMG:Wockner_2014
10694CCT8C21orf112 | Cctq | D21S246 | PRED71chaperonin containing TCP1 subunit 821q22.11CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2618GARTAIRS | GARS | GARTF | PAIS | PGFT | PRGSphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase21q22.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
54069MIS18AB28 | C21orf45 | C21orf46 | FASP1 | MIS18alpha | hMis18alphaMIS18 kinetochore protein A21q22.11CV:PGCnp
DMG:Jaffe_2016
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
7327UBE2G2UBC7ubiquitin conjugating enzyme E2 G221q22.3CV:PGCnp
10785WDR4TRM82 | TRMT82WD repeat domain 421q22.3CV:PGCnp
DMG:vanEijk_2014
8624PSMG1C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1proteasome (prosome, macropain) assembly chaperone 121q22.3CV:PGCnp
56894AGPAT3LPAAT-GAMMA1 | LPAAT31-acylglycerol-3-phosphate O-acyltransferase 321q22.3CV:PGCnpCompositeSet
Darnell FMRP targets
637BIDFP497BH3 interacting domain death agonist22q11.1Expression
GO_Annotation
GSMA_I
PMID:cooccur
23119HIC2HRG22 | ZBTB30 | ZNF907hypermethylated in cancer 222q11.21CNV:YES
GSMA_I
5902RANBP1HTF9ARAN binding protein 122q11.21Association
CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GR_WM
GSMA_I
Network
PMID:cooccur
8318CDC45CDC45L | CDC45L2 | PORC-PI-1cell division cycle 4522q11.21CNV:YES
CV:PGCnp
GSMA_I
23760PITPNBPI-TP-beta | PtdInsTP | VIB1Bphosphatidylinositol transfer protein beta22q12.1CV:PGCnp
Expression
GSMA_I
84133ZNRF3BK747E2.3 | RNF203zinc and ring finger 322q12.1CV:PGCnp
GSMA_I
11200CHEK2CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1checkpoint kinase 222q12.1CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
GSMA_I
8508NIPSNAP1-nipsnap homolog 1 (C. elegans)22q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
55000TUG1LINC00080 | NCRNA00080 | TI-227Htaurine up-regulated 1 (non-protein coding)22q12.2CV:PGCnp
7533YWHAHYWHA1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta22q12.3Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
80020FOXRED2ERFADFAD dependent oxidoreductase domain containing 222q12.3CV:GWASdb
CV:PGCnp
55615PRR5FLJ20185k | PP610 | PROTOR-1 | PROTOR1proline rich 522q13CV:PGCnp
DMG:vanEijk_2014
468ATF4CREB-2 | CREB2 | TAXREB67 | TXREBactivating transcription factor 422q13.1CV:PGCnp
PMID:cooccur
158ADSLAMPS | ASASE | ASLadenylosuccinate lyase22q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10478SLC25A17PMP34solute carrier family 25 member 1722q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
84844PHF5AINI | Rds3 | SAP14b | SF3B7 | SF3b14b | bK223H9.2PHD finger protein 5A22q13.2CV:PGCnp
DMG:Nishioka_2013
85358SHANK3DEL22q13.3 | PROSAP2 | PSAP2 | SCZD15 | SPANK-2SH3 and multiple ankyrin repeat domains 322q13.3CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9801MRPL19L19mt | MRP-L15 | MRP-L19 | MRPL15 | RLX1 | RPML15mitochondrial ribosomal protein L192p11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
10578GNLYD2S69E | LAG-2 | LAG2 | NKG5 | TLA519granulysin2p11.2CV:PGCnp
DMG:vanEijk_2014
GSMA_I
10617STAMBPAMSH | MICCAPSTAM binding protein2p13.1CV:PGCnp
Network
10797MTHFD2NMDMCmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase2p13.1CV:PGCnp
56902PNO1KHRBP1 | RRP20partner of NOB1 homolog2p14CV:PGCnp
5534PPP3R1CALNB1 | CNB | CNB1protein phosphatase 3 regulatory subunit B, alpha2p15CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Potential synaptic genes
10575CCT4CCT-DELTA | Cctd | SRBchaperonin containing TCP1 subunit 42p15CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
87178PNPT1COXPD13 | DFNB70 | OLD35 | PNPASE | old-35polyribonucleotide nucleotidyltransferase 12p15CV:PGCnp
DMG:Nishioka_2013
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
7444VRK2-vaccinia related kinase 22p16.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
55120FANCLFAAP43 | PHF9 | POGFanconi anemia complementation group L2p16.1CV:PGCnp
9378NRXN1Hs.22998 | PTHSL2 | SCZD17neurexin 12p16.3CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10128LRPPRCCLONE-23970 | GP130 | LRP130 | LSFCleucine rich pentatricopeptide repeat containing2p21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9637FEZ2HUM3CLfasciculation and elongation protein zeta 22p21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
790CADCDG1Zcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase2p22-p21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
5610EIF2AK2EIF2AK1 | PKR | PPP1R83 | PRKReukaryotic translation initiation factor 2 alpha kinase 22p22-p21CV:PGCnp
PMID:cooccur
6432SRSF79G8 | AAG3 | SFRS7serine/arginine-rich splicing factor 72p22.1CV:PGCnp
80745THUMPD2C2orf8THUMP domain containing 22p22.1|2p22-p21CV:PGCnp
55676SLC30A6MST103 | MSTP103 | ZNT6solute carrier family 30 member 62p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
ION BALANCE
84450ZNF512-zinc finger protein 5122p23CV:GWASdb
CV:PGCnp
8884SLC5A6SMVTsolute carrier family 5 member 62p23CV:PGCnp
DMG:Wockner_2014
55006TRMT61B-tRNA methyltransferase 61B2p23.2CV:PGCnp
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
9913SUPT7LSPT7L | STAF65 | STAF65(gamma) | STAF65G | SUPT7HSPT7-like STAGA complex gamma subunit2p23.3CV:PGCnp
DMG:Nishioka_2013
246243RNASEH1H1RNA | PEOB2 | RNH1ribonuclease H12p25CV:PGCnp
10971YWHAQ14-3-3 | 1C5 | HS1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta2p25.1CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1876E2F6E2F-6E2F transcription factor 62p25.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
91543RSAD22510004L01Rik | cig33 | cig5 | vig1radical S-adenosyl methionine domain containing 22p25.2CV:PGCnp
51263MRPL30L28MT | L30MT | MRP-L28 | MRP-L30 | MRPL28 | MRPL28M | RPML28mitochondrial ribosomal protein L302q11.2DMG:Jaffe_2016
GSMA_I
23397NCAPHBRRN1 | CAP-Hnon-SMC condensin I complex subunit H2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3631INPP4AINPP4 | TVAS1inositol polyphosphate-4-phosphatase type I A2q11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
64682ANAPC1APC1 | MCPR | TSG24anaphase promoting complex subunit 12q12.1CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
5903RANBP2ADANE | ANE1 | IIAE3 | NUP358 | TRP1 | TRP2RAN binding protein 22q12.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Network
Ascano FMRP targets
10018BCL2L11BAM | BIM | BODBCL2 like 112q13CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
8886DDX18MrDbDEAD-box helicase 182q14.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
Ascano FMRP targets
23332CLASP1MAST1cytoplasmic linker associated protein 12q14.2-q14.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
1615DARSHBSL | aspRSaspartyl-tRNA synthetase2q21.3GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
23518R3HDM1R3HDMR3H domain containing 12q21.3DMG:Nishioka_2013
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
339745SPOPLBTBD33speckle type BTB/POZ protein like2q22.1CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
55183RIF1-replication timing regulatory factor 12q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
55660PRPF40AFBP-11 | FBP11 | FLAF1 | FNBP3 | HIP-10 | HIP10 | HYPA | NY-REN-6 | Prp40pre-mRNA processing factor 40 homolog A2q23.3CV:PGCnp
Expression
GSMA_IIA
Network
Ascano FMRP targets
151188ARL6IP6AIP-6 | AIP6 | PFAAP1ADP ribosylation factor like GTPase 6 interacting protein 62q23.3CV:PGCnp
GSMA_IIA
114793FMNL2FHOD2formin like 22q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_IIA
CompositeSet
7130TNFAIP6TSG-6 | TSG6TNF alpha induced protein 62q23.3CV:PGCnp
GSMA_IIA
64135IFIH1AGS7 | Hlcd | IDDM19 | MDA-5 | MDA5 | RLR-2 | SGMRT1interferon induced, with helicase C domain 12q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
8502PKP4p0071plakophilin 42q24.1CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10010TANKI-TRAF | ITRAF | TRAF2TRAF family member associated NFKB activator2q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
Network
PMID:cooccur
51776ZAKAZK | MLK7 | MLT | MLTK | MRK | mlklak | pksterile alpha motif and leucine zipper containing kinase AZK2q24.2CV:PGCnp
25801GCAGCLgrancalcin2q24.2CV:PGCnp
GSMA_IIA
PMID:cooccur
10213PSMD14PAD1 | POH1 | RPN11proteasome 26S subunit, non-ATPase 142q24.2CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
1281COL3A1EDS4Acollagen type III alpha 12q31CV:PGCnp
DNM:Xu_2012
CompositeSet
83879CDCA7JPO1cell division cycle associated 72q31CV:PGCnp
DNM:Fromer_2014
CompositeSet
2571GAD1CPSQ1 | GAD | SCPglutamate decarboxylase 12q31Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
79675FASTKD1-FAST kinase domains 12q31CV:PGCnp
DMG:Wockner_2014
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
10651MTX2-metaxin 22q31.1CV:PGCnp
GO_Annotation
G2Cdb.human_mitochondria
29789OLA1DOC45 | GBP45 | GTBP9 | GTPBP9 | PTD004Obg-like ATPase 12q31.1CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
5378PMS1HNPCC3 | MLH2 | PMSL1 | hPMS1PMS1 homolog 1, mismatch repair system component2q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
79828METTL8TIPmethyltransferase like 82q31.1CV:PGCnp
DMG:Jaffe_2016
51661FKBP7FKBP23 | PPIaseFK506 binding protein 72q31.2DMG:Nishioka_2013
6120RPERPE2-1ribulose-5-phosphate-3-epimerase2q32-q33.3GSMA_IIA
GSMA_IIE
PMID:cooccur
2744GLSAAD20 | GAC | GAM | GLS1 | KGAglutaminase2q32-q34CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
10477UBE2E3UBCH9 | UbcM2ubiquitin conjugating enzyme E2 E32q32.1CV:PGCnp
DMG:Jaffe_2016
Network
6772STAT1CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91signal transducer and activator of transcription 12q32.2CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
64172OSGEPL1Qri7O-sialoglycoprotein endopeptidase-like 12q32.2CV:PGCnp
DMG:Wockner_2014
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
284992CCDC150-coiled-coil domain containing 1502q33.1CV:GWASdb
CV:PGCnp
205327C2orf69-chromosome 2 open reading frame 692q33.1CV:PGCnp
DMG:Jaffe_2016
LK:YES
92935MARS2COXPD25 | MetRS | mtMetRSmethionyl-tRNA synthetase 2, mitochondrial2q33.1CV:PGCnp
80055PGAP1Bst1 | ISPD3024 | MRT42 | SPG67post-GPI attachment to proteins 12q33.1CV:PGCnp
151246SGOL2SGO2 | TRIPINshugoshin-like 2 (S. pombe)2q33.1CV:PGCnp
Network
3329HSPD1CPN60 | GROEL | HLD4 | HSP-60 | HSP60 | HSP65 | HuCHA60 | SPG13heat shock protein family D (Hsp60) member 12q33.1CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9330GTF3C3TFIIIC102 | TFIIICgamma | TFiiiC2-102general transcription factor IIIC subunit 32q33.1CV:PGCnpAscano FMRP targets
57683ZDBF2-zinc finger DBF-type containing 22q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
151194METTL21AFAM119A | HCA557b | HSPA-KMTmethyltransferase like 21A2q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
3417IDH1HEL-216 | HEL-S-26 | IDCD | IDH | IDP | IDPC | PICDisocitrate dehydrogenase 1 (NADP+)2q33.3CV:PGCnp
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL METABOLISM
Chromatin Remodeling Genes
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
6168RPL37AL37Aribosomal protein L37a2q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
56947MFFC2orf33 | GL004mitochondrial fission factor2q36.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
9470EIF4E24E-LP | 4EHP | EIF4EL3 | IF4eeukaryotic translation initiation factor 4E family member 22q37.1CV:PGCnp
DMG:Jaffe_2016
4691NCLC23nucleolin2q37.1CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
6091ROBO1DUTT1 | SAX3roundabout guidance receptor 13p12CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Ascano FMRP targets
7110TMF1ARA160 | TMFTATA element modulatory factor 13p14.1CV:PGCnp
DMG:Nishioka_2013
23272FAM208AC3orf63 | RAP140 | se89-1family with sequence similarity 208 member A3p14.3CV:PGCnp
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
1230CCR1CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1C-C motif chemokine receptor 13p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6419SETMARMETNASE | Mar1SET domain and mariner transposase fusion gene3p26.1CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
1295COL8A1C3orf7collagen type VIII alpha 13q12.3GSMA_IIA
GSMA_IIE
PMID:cooccur
7372UMPSOPRTuridine monophosphate synthetase3q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
941CD80B7 | B7-1 | B7.1 | BB1 | CD28LG | CD28LG1 | LAB7CD80 molecule3q13.3-q21CV:PGCnp
PMID:cooccur
11222MRPL3COXPD9 | MRL3 | RPML3mitochondrial ribosomal protein L33q21-q23CV:PGCnp
26577PCOLCE2PCPE2procollagen C-endopeptidase enhancer 23q21-q24CV:GWASdb
CV:PGCnp
5361PLXNA1NOV | NOVP | PLEXIN-A1 | PLXN1plexin A13q21.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
27032ATP2C1ATP2C1A | BCPM | HHD | PMR1 | SPCA1 | hSPCA1ATPase secretory pathway Ca2+ transporting 13q22.1CV:PGCnp
DMG:vanEijk_2014
55186SLC25A36PNC2solute carrier family 25 member 363q23CV:PGCnp
DMG:Wockner_2014
GO_Annotation
545ATRFCTCS | FRP1 | MEC1 | SCKL | SCKL1ATR serine/threonine kinase3q23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
51319RSRC1BM-011 | SFRS21 | SRrp53arginine/serine-rich coiled-coil 13q25.32CV:PGCnp
PMID:cooccur
51068NMD3CGI-07NMD3 ribosome export adaptor3q26.1CV:PGCnp
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
56648EIF5A2EIF-5A2 | eIF5AIIeukaryotic translation initiation factor 5A23q26.2CV:PGCnp
DMG:Wockner_2014
55892MYNNOSZF | SBBIZ1 | ZBTB31 | ZNF902myoneurin3q26.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
6434TRA2BHtra2-beta | PPP1R156 | SFRS10 | SRFS10 | TRA2-BETA | TRAN2Btransformer 2 beta homolog (Drosophila)3q26.2-q27CV:PGCnp
54165DCUN1D1DCNL1 | DCUN1L1 | RP42 | SCCRO | SCRO | Tes3defective in cullin neddylation 1 domain containing 13q26.3CV:PGCnp
DMG:Wockner_2014
64778FNDC3BFAD104 | PRO4979 | YVTM2421fibronectin type III domain containing 3B3q26.31CV:PGCnp
Expression
55689YEATS2-YEATS domain containing 23q27.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5437POLR2HRPABC3 | RPB17 | RPB8polymerase (RNA) II subunit H3q28DMG:Jaffe_2016
8087FXR1FXR1PFMR1 autosomal homolog 13q28CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
8626TP63AIS | B(p51A) | B(p51B) | EEC3 | KET | LMS | NBP | OFC8 | RHS | SHFM4 | TP53CP | TP53L | TP73L | p40 | p51 | p53CP | p63 | p73H | p73Ltumor protein p633q28CV:PGCnp
CV:PheWAS
Network
7037TFRCCD71 | IMD46 | T9 | TFR | TFR1 | TR | TRFR | p90transferrin receptor3q29CNV:YES
CV:PGCnp
Network
PMID:cooccur
22916NCBP2CBC2 | CBP20 | NIP1 | PIG55nuclear cap binding protein subunit 23q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
323APBB2FE65L | FE65L1amyloid beta precursor protein binding family B member 24p13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
55161TMEM331600019D15Rik | SHINC3transmembrane protein 334p13CV:GWASdb
CV:PGCnp
51088KLHL5-kelch like family member 54p14CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5860QDPRDHPR | PKU2 | SDR33C1quinoid dihydropteridine reductase4p15.31CV:GWASdb
CV:PGCnp
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
51056LAP3HEL-S-106 | LAP | LAPEP | PEPSleucine aminopeptidase 34p15.32CV:PGCnp
64151NCAPGCAPG | CHCG | NY-MEL-3 | YCG1non-SMC condensin I complex subunit G4p15.33CV:PGCnpAscano FMRP targets
60312AFAP1AFAP | AFAP-110 | AFAP110actin filament associated protein 14p16CV:PGCnp
DMG:Wockner_2014
80306MED281500003D12Rik | EG1 | magicinmediator complex subunit 284p16CV:PGCnp
55646LYARZC2HC2 | ZLYARLy1 antibody reactive4p16.3CV:PGCnp
6452SH3BP23BP-2 | 3BP2 | CRBM | CRPM | RES4-23SH3-domain binding protein 24p16.3CV:PGCnp
DMG:Wockner_2014
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
6731SRP72BMFF | BMFS1 | HEL103signal recognition particle 72kDa4q11CV:PGCnp
DMG:Jaffe_2016
5471PPATATASE | GPAT | PRATphosphoribosyl pyrophosphate amidotransferase4q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
9662CEP135CEP4 | KIAA0635 | MCPH8centrosomal protein 135kDa4q12CV:PGCnp
DMG:Jaffe_2016
10606PAICSADE2 | ADE2H1 | AIRC | PAISphosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase4q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2926GRSF1-G-rich RNA sequence binding factor 14q13CV:PGCnp
2044EPHA5CEK7 | EHK-1 | EHK1 | EK7 | HEK7 | TYRO4EPH receptor A54q13.1CV:PGCnp
CV:PheWAS
3627CXCL10C7 | IFI10 | INP10 | IP-10 | SCYB10 | crg-2 | gIP-10 | mob-1C-X-C motif chemokine ligand 104q21CV:PGCnp
PMID:cooccur
4283CXCL9CMK | Humig | MIG | SCYB9 | crg-10C-X-C motif chemokine ligand 94q21PMID:cooccur
53371NUP54-nucleoporin 54kDa4q21.1DNM:Xu_2012CompositeSet
80144FRAS1-Fraser extracellular matrix complex subunit 14q21.21CV:PGCnp
DMG:Wockner_2014
79966SCD5ACOD4 | FADS4 | HSCD5 | SCD2 | SCD4stearoyl-CoA desaturase 54q21.22CV:PGCnp
DEG:Zhao_2015
Expression
58478ENOPH1E1 | MASA | MST145 | mtnCenolase-phosphatase 14q21.22CV:PGCnp
DMG:Jaffe_2016
56916SMARCAD1ADERM | ETL1 | HEL1SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 14q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
128ADH5ADH-3 | ADHX | FALDH | FDH | GSH-FDH | GSNOR | HEL-S-60palcohol dehydrogenase 5 (class III), chi polypeptide4q23PMID:cooccur
57117INTS12INT12 | PHF22 | SBBI22integrator complex subunit 124q24CV:PGCnp
493856CISD2ERIS | Miner1 | NAF-1 | WFS2 | ZCD2CDGSH iron sulfur domain 24q24CV:PGCnp
255743NPNTEGFL6L | POEMnephronectin4q24CV:GWASdb
CV:PGCnp
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
839CASP6MCH2caspase 64q25CV:PGCnp
Network
Ascano FMRP targets
2247FGF2BFGF | FGF-2 | FGFB | HBGF-2fibroblast growth factor 24q26CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
100093630SNHG8LINC00060 | NCRNA00060small nucleolar RNA host gene 84q26CV:PGCnp
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
54510PCDH18PCDH68Lprotocadherin 184q31CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
2983GUCY1B3GC-S-beta-1 | GC-SB3 | GUC1B3 | GUCB3 | GUCSB3 | GUCY1B1guanylate cyclase 1, soluble, beta 34q31.3-q33CV:PGCnp
DMG:Wockner_2014
Expression
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
6999TDO2TDO | TO | TPH2 | TRPOtryptophan 2,3-dioxygenase4q32.1CV:PGCnp
PMID:cooccur
91351DDX60L-DEAD-box helicase 60-like4q32.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
55601DDX60-DEXD/H-box helicase 604q32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
1635DCTD-dCMP deaminase4q35.1CV:GWASdb
CV:PGCnp
23530NNTGCCD4nicotinamide nucleotide transhydrogenase5p12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
10605PAIP1-poly(A) binding protein interacting protein 15p12CV:PGCnp
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
6507SLC1A3EA6 | EAAT1 | GLAST | GLAST1solute carrier family 1 member 35p13CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
2690GHRGHBP | GHIPgrowth hormone receptor5p13-p12CV:PGCnp
PMID:cooccur
5618PRLRHPRL | MFAB | hPRLrIprolactin receptor5p13.2CV:PGCnp
PMID:cooccur
6897TARSThrRSthreonyl-tRNA synthetase5p13.2CV:PGCnp
PMID:cooccur
51663ZFRSPG71 | ZFR1zinc finger RNA binding protein5p13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
26064RAI14NORPEG | RAI13retinoic acid induced 145p13.3-p13.2CV:PGCnp
DNM:McCarthy_2014
Network
4552MTRRMSR | cblE5-methyltetrahydrofolate-homocysteine methyltransferase reductase5p15.31CV:PGCnp
PMID:cooccur
55789DEPDC1BBRCC3 | XTP1DEP domain containing 1B5q12.1CV:PGCnp
57486NLNAGTBP | EP24.16 | MEP | MOPneurolysin5q12.3CV:PGCnp
DMG:Jaffe_2016
84327ZBED3-zinc finger BED-type containing 35q13.3CV:PGCnp
DMG:Jaffe_2016
10184LHFPL2-lipoma HMGIC fusion partner-like 25q14.1CV:PGCnp
DMG:Wockner_2014
7518XRCC4SSMEDX-ray repair complementing defective repair in Chinese hamster cells 45q14.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
57556SEMA6AHT018 | SEMA | SEMA6A1 | SEMAQ | VIAsemaphorin 6A5q23.1CV:PGCnp
DEG:Zhao_2015
Expression
GO_Annotation
PMID:cooccur
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
995CDC25CCDC25 | PPP1R60cell division cycle 25C5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
929CD14-CD14 molecule5q31.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
PMID:cooccur
CompositeSet
51520LARSHSPC192 | ILFS1 | LARS1 | LEURS | LEUS | LFIS | LRS | PIG44 | RNTLS | hr025Clleucyl-tRNA synthetase5q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
10146G3BP1G3BP | HDH-VIIIG3BP stress granule assembly factor 15q33.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
4869NPM1B23 | NPMnucleophosmin (nucleolar phosphoprotein B23, numatrin)5q35.1CV:PGCnp
GSMA_IIA
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
51491NOP16HSPC111 | HSPC185NOP16 nucleolar protein5q35.2CV:PGCnp
91272BOD1FAM44Bbiorientation of chromosomes in cell division 15q35.2CV:PGCnp
GSMA_IIA
PMID:cooccur
3182HNRNPABABBP1 | HNRPABheterogeneous nuclear ribonucleoprotein A/B5q35.3CV:GWASdb
CV:PGCnp
3187HNRNPH1HNRPH | HNRPH1 | hnRNPHheterogeneous nuclear ribonucleoprotein H1 (H)5q35.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
94081SFXN1-sideroflexin 15q35.3CV:GWASdb
CV:PGCnp
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
CompositeSet
9509ADAMTS2ADAM-TS2 | ADAMTS-2 | ADAMTS-3 | NPI | PC I-NP | PCI-NP | PCINP | PCPNI | PNPIADAM metallopeptidase with thrombospondin type 1 motif 25qterCV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
135398C6orf141-chromosome 6 open reading frame 1416p12.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
57510XPO5exp5exportin 56p21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
7941PLA2G7LDL-PLA2 | LP-PLA2 | PAFAD | PAFAHphospholipase A2 group VII6p21.2-p12CV:PGCnp
GSMA_IIE
PMID:cooccur
2289FKBP5AIG6 | FKBP51 | FKBP54 | P54 | PPIase | Ptg-10FK506 binding protein 56p21.31CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
203068TUBBCDCBM6 | CSCSC1 | M40 | OK/SW-cl.56 | TUBB1 | TUBB5tubulin beta class I6p21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
Network
STRUCTURAL PLASTICITY
1871E2F3E2F-3E2F transcription factor 36p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
80317ZKSCAN3ZF47 | ZFP306 | ZNF306 | ZNF309 | ZSCAN13 | ZSCAN35 | Zfp47 | dJ874C20.1 | dJ874C20.1. | zfp-47zinc finger with KRAB and SCAN domains 36p22.1CV:PGCnp
GSMA_I
6659SOX4EVI16SRY-box 46p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
135293PM20D2ACY1L2 | bA63L7.3peptidase M20 domain containing 26q15DMG:Jaffe_2016
9994CASP8AP2CED-4 | FLASH | RIP25caspase 8 associated protein 26q15CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
10973ASCC3ASC1p200 | HELIC1 | RNAHactivating signal cointegrator 1 complex subunit 36q16CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
29078NDUFAF4C6orf66 | HRPAP20 | HSPC125 | My013 | bA22L21.1NADH:ubiquinone oxidoreductase complex assembly factor 46q16.1CV:PGCnp
79694MANEAENDO | hEndomannosidase endo-alpha6q16.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
3066HDAC2HD2 | RPD3 | YAF1histone deacetylase 26q21DMG:Wockner_2014
Network
PMID:cooccur
Chromatin Remodeling Genes
2697GJA1AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCAgap junction protein alpha 16q22.31CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
64577ALDH8A1ALDH12 | DJ352A20.2aldehyde dehydrogenase 8 family member A16q23.2CV:PGCnp
25902MTHFD1LFTHFSDC1 | MTC1THFS | dJ292B18.2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like6q25.1CV:PGCnpAscano FMRP targets
348995NUP43bA350J20.1 | p42nucleoporin 43kDa6q25.1CV:PGCnp
26271FBXO5EMI1 | FBX5 | Fbxo31F-box protein 56q25.2CV:GWASdb
CV:PGCnp
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
7058THBS2TSP2thrombospondin 26q27CV:PGCnp
DMG:Wockner_2014
Expression
Potential synaptic genes
5723PSPHPSP | PSPHDphosphoserine phosphatase7p11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
908CCT6ACCT-zeta | CCT-zeta-1 | CCT6 | Cctz | HTR3 | MoDP-2 | TCP-1-zeta | TCP20 | TCPZ | TTCP20chaperonin containing TCP1 subunit 6A7p11.2CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
63979FIGNL1-fidgetin like 17p12.1CV:PGCnp
DMG:Wockner_2014
2887GRB10GRB-IR | Grb-10 | IRBP | MEG1 | RSSgrowth factor receptor bound protein 107p12.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
5478PPIACYPA | CYPH | HEL-S-69ppeptidylprolyl isomerase A7p13CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
222068TMED4ERS25 | GMP25iso | HNLF | p24a3 | p24alpha3transmembrane p24 trafficking protein 47p13CV:PGCnp
DMG:Jaffe_2016
5683PSMA2HC3 | MU | PMSA2 | PSC2proteasome subunit alpha 27p13CV:PGCnp
Expression
64983MRPL32HSPC283 | L32mt | MRP-L32 | bMRP-59bmitochondrial ribosomal protein L327p14CV:PGCnp
DMG:Jaffe_2016
23333DPY19L1-dpy-19 like 1 (C. elegans)7p14.2CV:PGCnp
55033FKBP14EDSKMH | FKBP22 | IPBP12FK506 binding protein 147p14.3CV:PGCnp
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
3181HNRNPA2B1HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1heterogeneous nuclear ribonucleoprotein A2/B17p15CV:PGCnp
11097NUPL2CG1 | NLP-1 | NLP_1 | hCG1nucleoporin like 27p15CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3624INHBAEDF | FRPinhibin beta A7p15-p13CV:PGCnp
GO_Annotation
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
9678PHF14-PHD finger protein 147p21.3CV:PGCnpAscano FMRP targets
4521NUDT1MTH1nudix hydrolase 17p22CV:PGCnp
LK:YES
29960FTSJ2FJH1 | HEL97 | MRM2 | RRMJ2FtsJ RNA methyltransferase homolog 2 (E. coli)7p22CV:GWAScat
CV:GWASdb
CV:PGCnp
LK:YES
6624FSCN1FAN1 | HSN | SNL | p55fascin actin-bundling protein 17p22CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8662EIF3BEIF3-ETA | EIF3-P110 | EIF3-P116 | EIF3S9 | PRT1eukaryotic translation initiation factor 3 subunit B7p22.3CV:PGCnp
DNM:Guipponi_2014
Ascano FMRP targets
51351ZNF117H-plk | HPF9zinc finger protein 1177q11.21CV:PGCnp
DMG:Wockner_2014
7532YWHAG14-3-3GAMMA | PPP1R170tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma7q11.23CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9031BAZ1BWBSCR10 | WBSCR9 | WSTFbromodomain adjacent to zinc finger domain 1B7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
3092HIP1HIP-I | ILWEQ | SHON | SHONbeta | SHONgammahuntingtin interacting protein 17q11.23CV:PGCnp
DEG:Zhao_2015
GO_Annotation
Ascano FMRP targets
53616ADAM22ADAM 22 | MDC2ADAM metallopeptidase domain 227q21CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
781CACNA2D1CACNA2 | CACNL2A | CCHL2A | LINC01112 | lncRNA-N3calcium voltage-gated channel auxiliary subunit alpha2delta 17q21-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
55972SLC25A40MCFPsolute carrier family 25 member 407q21.12CV:PGCnp
54467ANKIB1-ankyrin repeat and IBR domain containing 17q21.2CV:PGCnp
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
2050EPHB4HTK | MYK1 | TYRO11EPH receptor B47q22CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
7205TRIP6OIP-1 | OIP1 | TRIP-6 | TRIP6i2 | ZRP-1thyroid hormone receptor interactor 67q22CV:PGCnp
Network
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
5001ORC5ORC5L | ORC5P | ORC5T | PPP1R117origin recognition complex subunit 57q22.1CV:PGCnp
29992PILRAFDF03paired immunoglobin-like type 2 receptor alpha7q22.1CV:PGCnp
DMG:vanEijk_2014
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
54517PUS7-pseudouridylate synthase 7 (putative)7q22.3CV:PGCnp
60561RINT1RINT-1RAD50 interactor 17q22.3CV:PGCnp
9732DOCK4-dedicator of cytokinesis 47q31.1CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
857CAV1BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21caveolin 17q31.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
27044SND1TDRD11 | p100staphylococcal nuclease and tudor domain containing 17q31.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
4289MKLN1TWA2muskelin 17q32CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
813CALU-calumenin7q32.1CV:PGCnp
DMG:Jaffe_2016
84928TMEM209NET31transmembrane protein 2097q32.2CV:PGCnp
54927CHCHD3MINOS3 | Mic19 | PPP1R22coiled-coil-helix-coiled-coil-helix domain containing 37q33CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
51631LUC7L2CGI-59 | CGI-74 | LUC7B2LUC7-like 2 pre-mRNA splicing factor7q34CV:PGCnp
Network
6742SSBP1Mt-SSB | SOSS-B1 | SSBP | mtSSBsingle-stranded DNA binding protein 1, mitochondrial7q34DMG:Nishioka_2013
55750AGKCATC5 | CTRCT38 | MTDPS10 | MULKacylglycerol kinase7q34CV:PGCnp
DMG:Wockner_2014
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
26047CNTNAP2AUTS15 | CASPR2 | CDFE | NRXN4 | PTHSL1contactin associated protein-like 27q35CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
64327LMBR1ACHP | C7orf2 | DIF14 | LSS | PPD2 | THYP | TPT | ZRSlimb development membrane protein 17q36CV:GWASdb
CV:PGCnp
22976PAXIP1CAGF28 | CAGF29 | PACIP1 | PAXIP1L | PTIP | TNRC2PAX interacting protein 17q36CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
8454CUL1-cullin 17q36.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
54892NCAPG2CAP-G2 | CAPG2 | LUZP5 | MTB | hCAP-G2non-SMC condensin II complex subunit G27q36.3CV:PGCnp
DMG:Wockner_2014
10049DNAJB6DJ4 | DnaJ | HHDJ1 | HSJ-2 | HSJ2 | LGMD1D | LGMD1E | MRJ | MSJ-1DnaJ heat shock protein family (Hsp40) member B67q36.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
64434NOM1C7orf3 | PPP1R113 | SGD1nucleolar protein with MIF4G domain 17q36.3CV:GWASdb
CV:PGCnp
10947AP3M2AP47B | CLA20 | P47Badaptor related protein complex 3 mu 2 subunit8p11.2CV:PGCnp
DMG:Jaffe_2016
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
6770STARSTARD1steroidogenic acute regulatory protein8p11.2CV:PGCnp
PMID:cooccur
84750FUT10-fucosyltransferase 10 (alpha (1,3) fucosyltransferase)8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7486WRNRECQ3 | RECQL2 | RECQL3Werner syndrome RecQ like helicase8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
157570ESCO22410004I17Rik | EFO2 | RBSestablishment of sister chromatid cohesion N-acetyltransferase 28p21.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
55140ELP3KAT9elongator acetyltransferase complex subunit 38p21.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
55872PBKCT84 | HEL164 | Nori-3 | SPK | TOPKPDZ binding kinase8p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
23516SLC39A14LZT-Hs4 | NET34 | ZIP14 | cig19solute carrier family 39 member 148p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
526ATP6V1B2ATP6B1B2 | ATP6B2 | HO57 | VATB | VPP3 | Vma2ATPase H+ transporting V1 subunit B28p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
4481MSR1CD204 | SCARA1 | SR-A | SRA | phSR1 | phSR2macrophage scavenger receptor 18p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1808DPYSL2CRMP-2 | CRMP2 | DHPRP2 | DRP-2 | DRP2 | N2A3 | ULIP-2 | ULIP2dihydropyrimidinase like 28p22-p21Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5157PDGFRLPDGRL | PRLTSplatelet derived growth factor receptor like8p22-p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
54984PINX1LPTL | LPTSPIN2/TERF1 interacting, telomerase inhibitor 18p23CV:PGCnp
Network
9639ARHGEF10GEF10 | SNCVRho guanine nucleotide exchange factor 108p23Association
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
90459ERI13'HEXO | HEXO | THEX1exoribonuclease 18p23.1CV:PGCnp
DMG:Wockner_2014
285ANGPT2AGPT2 | ANG2angiopoietin 28p23.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
157697ERICH1HSPC319glutamate rich 18p23.3CV:PGCnp
DMG:Wockner_2014
5591PRKDCDNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | IMD26 | XRCC7 | p350protein kinase, DNA-activated, catalytic polypeptide8q11CV:PGCnp
DMG:vanEijk_2014
DNM:McCarthy_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
137886UBXN2Bp37UBX domain protein 2B8q12.1CV:PGCnp
23213SULF1SULF-1sulfatase 18q13.2CV:PGCnp
DMG:Wockner_2014
81796SLCO5A1OATP-J | OATP-RP4 | OATP5A1 | OATPJ | OATPRP4 | SLC21A15solute carrier organic anion transporter family member 5A18q13.3CV:GWASdb
CV:PGCnp
8767RIPK2CARD3 | CARDIAK | CCK | GIG30 | RICK | RIP2receptor interacting serine/threonine kinase 28q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
4683NBNAT-V1 | AT-V2 | ATV | NBS | NBS1 | P95nibrin8q21CV:PGCnp
6921TCEB1SIII | eloCtranscription elongation factor B subunit 18q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
51633OTUD6BCGI-77 | DUBA-5 | DUBA5OTU domain containing 6B8q21.3CV:PGCnp
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
55656INTS8C8orf52 | INT8integrator complex subunit 88q22.1CV:PGCnp
DMG:Wockner_2014
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
286148DPY19L4-dpy-19 like 4 (C. elegans)8q22.1CV:PGCnp
DMG:Jaffe_2016
25788RAD54BRDH54RAD54 homolog B (S. cerevisiae)8q22.1CV:PGCnp
DMG:Nishioka_2013
81034SLC25A32MFT | MFTC | RREIsolute carrier family 25 member 328q22.3CV:PGCnp
51582AZIN1AZI | AZIA1 | OAZI | OAZIN | ODC1Lantizyme inhibitor 18q22.3CV:PGCnp
DMG:Jaffe_2016
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
4856NOVCCN3 | IBP-9 | IGFBP-9 | IGFBP9 | NOVhnephroblastoma overexpressed8q24.1PMID:cooccur
50807ASAP1AMAP1 | CENTB4 | DDEF1 | PAG2 | PAP | ZG14PArfGAP with SH3 domain, ankyrin repeat and PH domain 18q24.1-q24.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
79139DERL1DER-1 | DER1derlin 18q24.13CV:PGCnp
DMG:Jaffe_2016
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
51571FAM49BBM-009 | L1family with sequence similarity 49 member B8q24.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
65265C8orf33-chromosome 8 open reading frame 338q24.3DMG:Jaffe_2016
169044COL22A1-collagen type XXII alpha 18q24.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
1537CYC1MC3DN6 | UQCR4cytochrome c18q24.3DMG:vanEijk_2014
DMG:Wockner_2014
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
2189FANCGFAG | XRCC9Fanconi anemia complementation group G9p13CV:PGCnp
DMG:Jaffe_2016
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
54801HAUS6Dgt6 | FAM29AHAUS augmin like complex subunit 69p22.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
10171RCL1RNAC | RPCL1RNA terminal phosphate cyclase-like 19p24.1-p23CV:GWASdb
CV:PGCnp
3376IARSIARS1 | ILERS | ILRS | IRS | PRO0785isoleucyl-tRNA synthetase9q21CV:PGCnp
1306COL15A1-collagen type XV alpha 19q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
2395FXNCyaY | FA | FARR | FRDA | X25frataxin9q21.11CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
29968PSAT1EPIP | NLS2 | PSA | PSAT | PSATDphosphoserine aminotransferase 19q21.2CV:PGCnp
GO_Annotation
PMID:cooccur
7088TLE1ESG | ESG1 | GRG1transducin like enhancer of split 19q21.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
10927SPIN1SPIN | TDRD24spindlin 19q22.1CV:PGCnp
4915NTRK2GP145-TrkB | TRKB | trk-Bneurotrophic tyrosine kinase, receptor, type 29q22.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
55035NOL8C9orf34 | NOP132 | bA62C3.3 | bA62C3.4nucleolar protein 89q22.31CV:PGCnp
85301COL27A1STLScollagen type XXVII alpha 19q32CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
286205SCAIC9orf126 | NET40suppressor of cancer cell invasion9q33.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
57706DENND1AFAM31A | KIAA1608DENN domain containing 1A9q33.3CV:PGCnp
CV:PheWAS
9355LHX2LH2 | hLhx2LIM homeobox 29q33.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
1861TOR1ADQ2 | DYT1torsin family 1 member A9q34CV:PGCnp
GO_Annotation
9329GTF3C4KAT12 | TF3C-delta | TFIII90 | TFIIIC290 | TFIIIC90 | TFIIICDELTAgeneral transcription factor IIIC subunit 49q34.13CV:GWASdb
CV:PGCnp
10439OLFM1AMY | NOE1 | NOELIN1 | OlfAolfactomedin 19q34.3CV:PGCnp
DEG:Maycox_2009
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
8573CASKCAGH39 | CAMGUK | CMG | FGS4 | LIN2 | MICPCH | MRXSNA | TNRC8calcium/calmodulin-dependent serine protein kinase (MAGUK family)Xp11.4CV:PGCnp
Expression
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
Potential synaptic genes
1756DMDBMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85dystrophinXp21.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
84061MAGT1IAP | MRX95 | OST3B | PRO0756 | XMEN | bA217H1.1magnesium transporter 1Xq21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
65109UPF3BHUPF3B | MRX62 | MRXS14 | RENT3B | UPF3BP1 | UPF3BP2 | UPF3BP3 | UPF3X | Upf3p-XUPF3 regulator of nonsense transcripts homolog B (yeast)Xq24CV:PGCnp
PMID:cooccur
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur