Gene Page: INHBA
Summary ?
GeneID | 3624 |
Symbol | INHBA |
Synonyms | EDF|FRP |
Description | inhibin beta A |
Reference | MIM:147290|HGNC:HGNC:6066|HPRD:00929| |
Gene type | protein-coding |
Map location | 7p15-p13 |
Pascal p-value | 5.726E-5 |
eGene | Myers' cis & trans |
Gene in Data Sources
Gene set name | Method of gene set | Description | Info |
---|---|---|---|
CV:PGCnp | Genome-wide Association Study | GWAS | |
GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 1 |
Section I. Genetics and epigenetics annotation
eQTL annotation
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs6687320 | chr1 | 37430362 | INHBA | 3624 | 0.08 | trans | ||
rs1572945 | chr1 | 58069522 | INHBA | 3624 | 0.1 | trans | ||
rs12030788 | chr1 | 66768128 | INHBA | 3624 | 1.609E-4 | trans | ||
rs11807500 | chr1 | 68503525 | INHBA | 3624 | 0.06 | trans | ||
rs2014805 | chr2 | 175165192 | INHBA | 3624 | 0.06 | trans | ||
rs7608942 | chr2 | 182820100 | INHBA | 3624 | 0.2 | trans | ||
rs1014141 | chr3 | 43810759 | INHBA | 3624 | 0.1 | trans | ||
rs11130012 | chr3 | 43823179 | INHBA | 3624 | 0.05 | trans | ||
rs7615639 | chr3 | 43852564 | INHBA | 3624 | 0.15 | trans | ||
rs17044826 | chr3 | 66620522 | INHBA | 3624 | 0.1 | trans | ||
rs1959283 | chr3 | 159917358 | INHBA | 3624 | 0.1 | trans | ||
rs614566 | chr3 | 182847389 | INHBA | 3624 | 0.08 | trans | ||
rs6834153 | chr4 | 8606484 | INHBA | 3624 | 0 | trans | ||
rs6894161 | chr5 | 91098032 | INHBA | 3624 | 0.18 | trans | ||
rs17109939 | chr5 | 148694416 | INHBA | 3624 | 0.03 | trans | ||
rs2056166 | chr5 | 160448661 | INHBA | 3624 | 0.16 | trans | ||
rs11960742 | chr5 | 173068112 | INHBA | 3624 | 0.04 | trans | ||
rs226945 | chr6 | 3717178 | INHBA | 3624 | 0.09 | trans | ||
rs226963 | chr6 | 3724120 | INHBA | 3624 | 0.13 | trans | ||
snp_a-2046639 | 0 | INHBA | 3624 | 0.01 | trans | |||
rs3888778 | chr6 | 30529621 | INHBA | 3624 | 0.04 | trans | ||
rs2239516 | chr6 | 30578047 | INHBA | 3624 | 0.04 | trans | ||
rs6904236 | chr6 | 30596134 | INHBA | 3624 | 0.06 | trans | ||
rs7749235 | chr6 | 30635592 | INHBA | 3624 | 0.17 | trans | ||
rs6457967 | chr6 | 37002011 | INHBA | 3624 | 0.07 | trans | ||
rs10484851 | chr6 | 38978770 | INHBA | 3624 | 0.11 | trans | ||
rs9381009 | chr6 | 40918100 | INHBA | 3624 | 0.19 | trans | ||
rs887719 | chr7 | 21184272 | INHBA | 3624 | 0.1 | trans | ||
rs320082 | chr7 | 29105404 | INHBA | 3624 | 1.668E-6 | trans | ||
rs317720 | chr7 | 29110633 | INHBA | 3624 | 3.005E-5 | trans | ||
rs317714 | chr7 | 29115553 | INHBA | 3624 | 1.575E-7 | trans | ||
rs317724 | chr7 | 29120565 | INHBA | 3624 | 3.005E-5 | trans | ||
rs1419793 | chr7 | 34697630 | INHBA | 3624 | 0.03 | trans | ||
rs343083 | chr7 | 35571887 | INHBA | 3624 | 0.03 | trans | ||
rs6942437 | chr7 | 146798442 | INHBA | 3624 | 0.06 | trans | ||
rs12540961 | chr8 | 9689750 | INHBA | 3624 | 0 | trans | ||
rs7829733 | chr8 | 9691720 | INHBA | 3624 | 2.037E-4 | trans | ||
rs7013686 | chr8 | 9715474 | INHBA | 3624 | 0.04 | trans | ||
rs4242415 | chr8 | 24597175 | INHBA | 3624 | 0.05 | trans | ||
rs2340775 | chr8 | 29082610 | INHBA | 3624 | 0.15 | trans | ||
rs16886605 | chr8 | 115894398 | INHBA | 3624 | 0.14 | trans | ||
rs11203077 | chr10 | 91097084 | INHBA | 3624 | 0 | trans | ||
rs10834670 | chr11 | 25404015 | INHBA | 3624 | 0 | trans | ||
rs10834671 | chr11 | 25404269 | INHBA | 3624 | 0.01 | trans | ||
rs17320769 | chr11 | 30707634 | INHBA | 3624 | 0.08 | trans | ||
rs11019015 | chr11 | 90157517 | INHBA | 3624 | 0.03 | trans | ||
rs17127472 | chr11 | 123448587 | INHBA | 3624 | 0.04 | trans | ||
rs11066476 | chr12 | 113465366 | INHBA | 3624 | 0.01 | trans | ||
rs16949584 | chr12 | 120153747 | INHBA | 3624 | 0.19 | trans | ||
rs4497566 | chr13 | 51694324 | INHBA | 3624 | 0.15 | trans | ||
rs2993290 | chr13 | 113647189 | INHBA | 3624 | 1.083E-4 | trans | ||
rs11158850 | chr14 | 70757171 | INHBA | 3624 | 4.354E-4 | trans | ||
rs17117326 | chr14 | 73017125 | INHBA | 3624 | 0.15 | trans | ||
rs17737309 | chr14 | 85359235 | INHBA | 3624 | 0.04 | trans | ||
rs3790050 | chr14 | 94421666 | INHBA | 3624 | 0.11 | trans | ||
rs11072201 | chr15 | 70857175 | INHBA | 3624 | 0.07 | trans | ||
rs7200513 | chr16 | 17219474 | INHBA | 3624 | 0.04 | trans | ||
rs3829495 | chr16 | 17221986 | INHBA | 3624 | 0.01 | trans | ||
rs2219403 | chr17 | 72059030 | INHBA | 3624 | 0.07 | trans | ||
rs12452652 | chr17 | 72235560 | INHBA | 3624 | 7.688E-6 | trans | ||
rs9646596 | chr18 | 53049211 | INHBA | 3624 | 0.02 | trans | ||
rs17594526 | chr18 | 53058237 | INHBA | 3624 | 0.03 | trans | ||
rs11152369 | chr18 | 53066327 | INHBA | 3624 | 0.16 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)

Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section III. Gene Ontology annotation
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
---|---|---|---|---|
GO:0005179 | hormone activity | TAS | 12456957 | |
GO:0005125 | cytokine activity | IDA | 9884026 | |
GO:0008083 | growth factor activity | TAS | 12324653 | |
GO:0017106 | activin inhibitor activity | TAS | 12456957 | |
GO:0042802 | identical protein binding | IPI | 2575216 | |
GO:0048184 | follistatin binding | IPI | 16198295 | |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
GO:0007399 | nervous system development | NAS | neurite (GO term level: 5) | 10320815 |
GO:0000082 | G1/S transition of mitotic cell cycle | IDA | 9884026 | |
GO:0001501 | skeletal system development | TAS | 10865214 | |
GO:0001541 | ovarian follicle development | NAS | 9166111 | |
GO:0007267 | cell-cell signaling | TAS | 12456957 | |
GO:0006917 | induction of apoptosis | IDA | 8267637 | |
GO:0007166 | cell surface receptor linked signal transduction | TAS | 12456957 | |
GO:0007050 | cell cycle arrest | IDA | 9884026 | |
GO:0009605 | response to external stimulus | TAS | 10320815 | |
GO:0006952 | defense response | TAS | 12456957 | |
GO:0042326 | negative regulation of phosphorylation | TAS | 12456957 | |
GO:0030154 | cell differentiation | TAS | 12456957 | |
GO:0042541 | hemoglobin biosynthetic process | IDA | 1310063 | |
GO:0032925 | regulation of activin receptor signaling pathway | IDA | 9884026 | |
GO:0030308 | negative regulation of cell growth | IDA | 9884026 | |
GO:0040007 | growth | IEA | - | |
GO:0045648 | positive regulation of erythrocyte differentiation | IDA | 9032295 | |
GO:0045650 | negative regulation of macrophage differentiation | TAS | 12456957 | |
GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | IDA | 12702211 | |
GO:0046881 | positive regulation of follicle-stimulating hormone secretion | TAS | 12456957 | |
GO:0046882 | negative regulation of follicle-stimulating hormone secretion | NAS | 3267209 | |
GO:0045077 | negative regulation of interferon-gamma biosynthetic process | TAS | 12456957 | |
GO:0045786 | negative regulation of cell cycle | IDA | 9884026 | |
GO:0045578 | negative regulation of B cell differentiation | TAS | 12456957 | |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
GO:0005576 | extracellular region | IDA | 12213882 | |
GO:0043509 | activin A complex | IDA | 7890768 | |
GO:0043512 | inhibin A complex | IDA | 7890768 |
Section IV. Protein-protein interaction annotation
Interactors | Aliases B | Official full name B | Experimental | Source | PubMed ID |
---|---|---|---|---|---|
ACVR1 | ACTRI | ACVR1A | ACVRLK2 | ALK2 | FOP | SKR1 | TSRI | activin A receptor, type I | - | HPRD | 11266516 |
ACVR1B | ACTRIB | ACVRLK4 | ALK4 | SKR2 | activin A receptor, type IB | Affinity Capture-Western | BioGRID | 9202237 |
ACVR1B | ACTRIB | ACVRLK4 | ALK4 | SKR2 | activin A receptor, type IB | - | HPRD | 8397373 |
ACVR2A | ACTRII | ACVR2 | activin A receptor, type IIA | Affinity Capture-Western | BioGRID | 9202237 |10746731 |
ACVR2A | ACTRII | ACVR2 | activin A receptor, type IIA | - | HPRD | 11266516 |
ACVR2B | ACTRIIB | ActR-IIB | MGC116908 | activin A receptor, type IIB | - | HPRD,BioGRID | 9202237 |
CHRDL2 | BNF1 | CHL2 | DKFZp586N2124 | FKSG37 | chordin-like 2 | - | HPRD,BioGRID | 15094188 |
ENG | CD105 | END | FLJ41744 | HHT1 | ORW | ORW1 | endoglin | - | HPRD | 9872992 |
FSTL3 | FLRG | FSRP | follistatin-like 3 (secreted glycoprotein) | - | HPRD,BioGRID | 11459787 |
IGFBP7 | FSTL2 | IGFBP-7 | IGFBP-7v | IGFBPRP1 | MAC25 | PSF | insulin-like growth factor binding protein 7 | - | HPRD,BioGRID | 10859029 |
INHA | - | inhibin, alpha | - | HPRD | 11134153 |
INHBA | EDF | FRP | inhibin, beta A | - | HPRD | 11134153 |
INHBA | EDF | FRP | inhibin, beta A | Activin A interacts with itself to form a homodimer. | BIND | 8015550 |
INHBB | MGC157939 | inhibin, beta B | - | HPRD | 11134153 |
INHBC | IHBC | inhibin, beta C | - | HPRD | 11134153 |
TGFBR3 | BGCAN | betaglycan | transforming growth factor, beta receptor III | - | HPRD | 10746731 |
Section V. Pathway annotation
Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
---|---|---|---|
KEGG CYTOKINE CYTOKINE RECEPTOR INTERACTION | 267 | 161 | All SZGR 2.0 genes in this pathway |
KEGG TGF BETA SIGNALING PATHWAY | 86 | 64 | All SZGR 2.0 genes in this pathway |
PID ALK1 PATHWAY | 26 | 21 | All SZGR 2.0 genes in this pathway |
REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | 200 | 136 | All SZGR 2.0 genes in this pathway |
REACTOME GLYCOPROTEIN HORMONES | 12 | 8 | All SZGR 2.0 genes in this pathway |
REACTOME PEPTIDE HORMONE BIOSYNTHESIS | 14 | 10 | All SZGR 2.0 genes in this pathway |
NAKAMURA TUMOR ZONE PERIPHERAL VS CENTRAL UP | 285 | 181 | All SZGR 2.0 genes in this pathway |
SCHUETZ BREAST CANCER DUCTAL INVASIVE UP | 351 | 230 | All SZGR 2.0 genes in this pathway |
SENGUPTA NASOPHARYNGEAL CARCINOMA UP | 294 | 178 | All SZGR 2.0 genes in this pathway |
DAVICIONI TARGETS OF PAX FOXO1 FUSIONS UP | 255 | 177 | All SZGR 2.0 genes in this pathway |
TURASHVILI BREAST DUCTAL CARCINOMA VS LOBULAR NORMAL UP | 73 | 50 | All SZGR 2.0 genes in this pathway |
TURASHVILI BREAST LOBULAR CARCINOMA VS DUCTAL NORMAL UP | 69 | 38 | All SZGR 2.0 genes in this pathway |
WILCOX RESPONSE TO PROGESTERONE DN | 66 | 44 | All SZGR 2.0 genes in this pathway |
FULCHER INFLAMMATORY RESPONSE LECTIN VS LPS UP | 579 | 346 | All SZGR 2.0 genes in this pathway |
SAMOLS TARGETS OF KHSV MIRNAS DN | 62 | 35 | All SZGR 2.0 genes in this pathway |
CHARAFE BREAST CANCER LUMINAL VS BASAL DN | 455 | 304 | All SZGR 2.0 genes in this pathway |
CHARAFE BREAST CANCER LUMINAL VS MESENCHYMAL DN | 460 | 312 | All SZGR 2.0 genes in this pathway |
VECCHI GASTRIC CANCER ADVANCED VS EARLY UP | 175 | 120 | All SZGR 2.0 genes in this pathway |
VECCHI GASTRIC CANCER EARLY UP | 430 | 232 | All SZGR 2.0 genes in this pathway |
GARGALOVIC RESPONSE TO OXIDIZED PHOSPHOLIPIDS BLUE UP | 136 | 80 | All SZGR 2.0 genes in this pathway |
TAKEDA TARGETS OF NUP98 HOXA9 FUSION 6HR DN | 41 | 29 | All SZGR 2.0 genes in this pathway |
TONKS TARGETS OF RUNX1 RUNX1T1 FUSION MONOCYTE UP | 204 | 140 | All SZGR 2.0 genes in this pathway |
SENESE HDAC2 TARGETS UP | 114 | 66 | All SZGR 2.0 genes in this pathway |
SABATES COLORECTAL ADENOMA UP | 141 | 75 | All SZGR 2.0 genes in this pathway |
KIM WT1 TARGETS UP | 214 | 155 | All SZGR 2.0 genes in this pathway |
KIM WT1 TARGETS 12HR DN | 209 | 122 | All SZGR 2.0 genes in this pathway |
GRAHAM CML QUIESCENT VS NORMAL DIVIDING UP | 57 | 33 | All SZGR 2.0 genes in this pathway |
GRAHAM CML DIVIDING VS NORMAL QUIESCENT DN | 95 | 57 | All SZGR 2.0 genes in this pathway |
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING UP | 66 | 47 | All SZGR 2.0 genes in this pathway |
DODD NASOPHARYNGEAL CARCINOMA DN | 1375 | 806 | All SZGR 2.0 genes in this pathway |
DELYS THYROID CANCER UP | 443 | 294 | All SZGR 2.0 genes in this pathway |
BERENJENO TRANSFORMED BY RHOA REVERSIBLY DN | 29 | 21 | All SZGR 2.0 genes in this pathway |
BERENJENO TRANSFORMED BY RHOA UP | 536 | 340 | All SZGR 2.0 genes in this pathway |
OLSSON E2F3 TARGETS DN | 49 | 33 | All SZGR 2.0 genes in this pathway |
RASHI RESPONSE TO IONIZING RADIATION 5 | 147 | 89 | All SZGR 2.0 genes in this pathway |
WANG METHYLATED IN BREAST CANCER | 35 | 25 | All SZGR 2.0 genes in this pathway |
LI WILMS TUMOR VS FETAL KIDNEY 2 DN | 51 | 42 | All SZGR 2.0 genes in this pathway |
PUJANA BRCA1 PCC NETWORK | 1652 | 1023 | All SZGR 2.0 genes in this pathway |
PUJANA ATM PCC NETWORK | 1442 | 892 | All SZGR 2.0 genes in this pathway |
NUYTTEN NIPP1 TARGETS UP | 769 | 437 | All SZGR 2.0 genes in this pathway |
NUYTTEN EZH2 TARGETS UP | 1037 | 673 | All SZGR 2.0 genes in this pathway |
BUYTAERT PHOTODYNAMIC THERAPY STRESS UP | 811 | 508 | All SZGR 2.0 genes in this pathway |
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY DN | 382 | 224 | All SZGR 2.0 genes in this pathway |
SCHAEFFER PROSTATE DEVELOPMENT 6HR DN | 514 | 330 | All SZGR 2.0 genes in this pathway |
SCHAEFFER PROSTATE DEVELOPMENT 12HR DN | 57 | 45 | All SZGR 2.0 genes in this pathway |
SCHAEFFER PROSTATE DEVELOPMENT 48HR DN | 428 | 306 | All SZGR 2.0 genes in this pathway |
SCHAEFFER SOX9 TARGETS IN PROSTATE DEVELOPMENT DN | 45 | 33 | All SZGR 2.0 genes in this pathway |
GOTZMANN EPITHELIAL TO MESENCHYMAL TRANSITION UP | 69 | 55 | All SZGR 2.0 genes in this pathway |
BENPORATH SOX2 TARGETS | 734 | 436 | All SZGR 2.0 genes in this pathway |
AMIT EGF RESPONSE 60 MCF10A | 39 | 24 | All SZGR 2.0 genes in this pathway |
AMIT SERUM RESPONSE 60 MCF10A | 57 | 42 | All SZGR 2.0 genes in this pathway |
ZHANG RESPONSE TO IKK INHIBITOR AND TNF UP | 223 | 140 | All SZGR 2.0 genes in this pathway |
DING LUNG CANCER MUTATED SIGNIFICANTLY | 26 | 22 | All SZGR 2.0 genes in this pathway |
ONDER CDH1 TARGETS 2 DN | 464 | 276 | All SZGR 2.0 genes in this pathway |
CERVERA SDHB TARGETS 1 UP | 118 | 66 | All SZGR 2.0 genes in this pathway |
JECHLINGER EPITHELIAL TO MESENCHYMAL TRANSITION UP | 71 | 51 | All SZGR 2.0 genes in this pathway |
SANA TNF SIGNALING UP | 83 | 56 | All SZGR 2.0 genes in this pathway |
SANA RESPONSE TO IFNG DN | 85 | 56 | All SZGR 2.0 genes in this pathway |
MANALO HYPOXIA UP | 207 | 145 | All SZGR 2.0 genes in this pathway |
LENAOUR DENDRITIC CELL MATURATION UP | 114 | 84 | All SZGR 2.0 genes in this pathway |
KUMAR TARGETS OF MLL AF9 FUSION | 405 | 264 | All SZGR 2.0 genes in this pathway |
LIANG SILENCED BY METHYLATION 2 | 53 | 34 | All SZGR 2.0 genes in this pathway |
REN ALVEOLAR RHABDOMYOSARCOMA DN | 408 | 274 | All SZGR 2.0 genes in this pathway |
KAYO AGING MUSCLE UP | 244 | 165 | All SZGR 2.0 genes in this pathway |
NIELSEN LIPOSARCOMA DN | 19 | 8 | All SZGR 2.0 genes in this pathway |
BROWNE HCMV INFECTION 48HR DN | 504 | 323 | All SZGR 2.0 genes in this pathway |
MCLACHLAN DENTAL CARIES DN | 245 | 144 | All SZGR 2.0 genes in this pathway |
RODWELL AGING KIDNEY NO BLOOD UP | 222 | 139 | All SZGR 2.0 genes in this pathway |
RODWELL AGING KIDNEY UP | 487 | 303 | All SZGR 2.0 genes in this pathway |
MCLACHLAN DENTAL CARIES UP | 253 | 147 | All SZGR 2.0 genes in this pathway |
DE YY1 TARGETS DN | 92 | 64 | All SZGR 2.0 genes in this pathway |
ZHENG IL22 SIGNALING UP | 56 | 36 | All SZGR 2.0 genes in this pathway |
BOQUEST STEM CELL UP | 260 | 174 | All SZGR 2.0 genes in this pathway |
BOQUEST STEM CELL CULTURED VS FRESH UP | 425 | 298 | All SZGR 2.0 genes in this pathway |
LABBE TARGETS OF TGFB1 AND WNT3A UP | 111 | 70 | All SZGR 2.0 genes in this pathway |
MOOTHA PGC | 420 | 269 | All SZGR 2.0 genes in this pathway |
HELLEBREKERS SILENCED DURING TUMOR ANGIOGENESIS | 80 | 56 | All SZGR 2.0 genes in this pathway |
LINDSTEDT DENDRITIC CELL MATURATION A | 67 | 52 | All SZGR 2.0 genes in this pathway |
RUTELLA RESPONSE TO CSF2RB AND IL4 UP | 338 | 225 | All SZGR 2.0 genes in this pathway |
RUTELLA RESPONSE TO HGF UP | 418 | 282 | All SZGR 2.0 genes in this pathway |
RUTELLA RESPONSE TO HGF VS CSF2RB AND IL4 DN | 245 | 150 | All SZGR 2.0 genes in this pathway |
HAN SATB1 TARGETS UP | 395 | 249 | All SZGR 2.0 genes in this pathway |
HAN SATB1 TARGETS DN | 442 | 275 | All SZGR 2.0 genes in this pathway |
POOLA INVASIVE BREAST CANCER UP | 288 | 168 | All SZGR 2.0 genes in this pathway |
MIKKELSEN MEF LCP WITH H3K4ME3 | 128 | 68 | All SZGR 2.0 genes in this pathway |
DANG REGULATED BY MYC DN | 253 | 192 | All SZGR 2.0 genes in this pathway |
NAKAYAMA SOFT TISSUE TUMORS PCA2 UP | 87 | 50 | All SZGR 2.0 genes in this pathway |
BROWNE HCMV INFECTION 1HR DN | 222 | 147 | All SZGR 2.0 genes in this pathway |
MARTENS BOUND BY PML RARA FUSION | 456 | 287 | All SZGR 2.0 genes in this pathway |
CHICAS RB1 TARGETS SENESCENT | 572 | 352 | All SZGR 2.0 genes in this pathway |
BRUINS UVC RESPONSE VIA TP53 GROUP B | 549 | 316 | All SZGR 2.0 genes in this pathway |
WIEDERSCHAIN TARGETS OF BMI1 AND PCGF2 | 57 | 39 | All SZGR 2.0 genes in this pathway |
WINZEN DEGRADED VIA KHSRP | 100 | 70 | All SZGR 2.0 genes in this pathway |
PLASARI TGFB1 TARGETS 10HR UP | 199 | 143 | All SZGR 2.0 genes in this pathway |
PEDRIOLI MIR31 TARGETS UP | 221 | 120 | All SZGR 2.0 genes in this pathway |
PHONG TNF TARGETS UP | 63 | 43 | All SZGR 2.0 genes in this pathway |
PHONG TNF RESPONSE VIA P38 PARTIAL | 160 | 106 | All SZGR 2.0 genes in this pathway |
ANASTASSIOU CANCER MESENCHYMAL TRANSITION SIGNATURE | 64 | 40 | All SZGR 2.0 genes in this pathway |
GHANDHI DIRECT IRRADIATION UP | 110 | 68 | All SZGR 2.0 genes in this pathway |
GHANDHI BYSTANDER IRRADIATION UP | 86 | 54 | All SZGR 2.0 genes in this pathway |
ZWANG CLASS 2 TRANSIENTLY INDUCED BY EGF | 51 | 29 | All SZGR 2.0 genes in this pathway |
NABA SECRETED FACTORS | 344 | 197 | All SZGR 2.0 genes in this pathway |
NABA MATRISOME ASSOCIATED | 753 | 411 | All SZGR 2.0 genes in this pathway |
NABA MATRISOME | 1028 | 559 | All SZGR 2.0 genes in this pathway |
Section VI. microRNA annotation
miRNA family | Target position | miRNA ID | miRNA seq | ||
---|---|---|---|---|---|
UTR start | UTR end | Match method | |||
miR-135 | 412 | 418 | m8 | hsa-miR-135a | UAUGGCUUUUUAUUCCUAUGUGA |
hsa-miR-135b | UAUGGCUUUUCAUUCCUAUGUG | ||||
miR-205 | 172 | 179 | 1A,m8 | hsa-miR-205 | UCCUUCAUUCCACCGGAGUCUG |
- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.