Search results: The pahtway p2386 has 428 genes in the original annotation. Currently, there are 306 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
2572GAD2GAD65glutamate decarboxylase 210p11.23CV:PGCnp
GO_Annotation
Network
PMID:cooccur
22921MSRB2CBS-1 | CBS1 | CGI-131 | MSRB | PILBmethionine sulfoxide reductase B210p12CV:PGCnp
PMID:cooccur
83641FAM107BC10orf45family with sequence similarity 107 member B10p13CV:GWASdb
CV:PGCnp
84159ARID5BDESRT | MRF-2 | MRF2AT-rich interaction domain 5B10q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
118881COMTD1-catechol-O-methyltransferase domain containing 110q22.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
29760BLNKAGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bcaB-cell linker10q23.2-q23.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
5728PTEN10q23del | BZS | CWS1 | DEC | GLM2 | MHAM | MMAC1 | PTEN1 | TEP1phosphatase and tensin homolog10q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
27250PDCD4H731programmed cell death 4 (neoplastic transformation inhibitor)10q24DMG:Jaffe_2016
51684SUFUPRO1280 | SUFUH | SUFUXLSUFU negative regulator of hedgehog signaling10q24.32CV:PGCnp
119587CPXM2CPX2 | UNQ676carboxypeptidase X (M14 family), member 210q26.13CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
64077LHPPHDHD2Bphospholysine phosphohistidine inorganic pyrophosphate phosphatase10q26.13CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
256536TCERG1L-transcription elongation regulator 1 like10q26.3CV:GWASdb
CV:PGCnp
GSMA_IIA
85442KNDC1C10orf23 | RASGEF2 | bB439H18.3kinase non-catalytic C-lobe domain (KIND) containing 110q26.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CompositeSet
Darnell FMRP targets
90139TSPAN18TSPANtetraspanin 1811p11.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
57586SYT13-synaptotagmin 1311p11.2CV:PGCnp
79899PRR5LPROTOR2proline rich 5 like11p13-p12CV:PGCnp
3739KCNA4HBK4 | HK1 | HPCN2 | HUKII | KCNA4L | KCNA8 | KV1.4 | PCN2potassium voltage-gated channel subfamily A member 411p14CV:PGCnpEXCITABILITY
387758FIBIN-fin bud initiation factor homolog (zebrafish)11p14.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
143662MUC15MUC-15 | PAS3 | PASIIImucin 15, cell surface associated11p14.3CV:PGCnp
29850TRPM5LTRPC5 | MTR1transient receptor potential cation channel subfamily M member 511p15.5CV:PGCnp
DMG:Wockner_2014
57124CD248CD164L1 | TEM1CD248 molecule11q13CV:PGCnp
DMG:Wockner_2014
116535MRGPRFGPR140 | GPR168 | MRGF | RTAMAS related GPR family member F11q13.3CV:PGCnp
220382FAM181B-family with sequence similarity 181 member B11q14.1CV:PGCnp
DMG:Wockner_2014
7225TRPC6FSGS2 | TRP6transient receptor potential cation channel subfamily C member 611q22.1CV:PGCnp
PMID:cooccur
4314MMP3CHDS6 | MMP-3 | SL-1 | STMY | STMY1 | STR1matrix metallopeptidase 311q22.3PMID:cooccur
85458DIXDC1CCD1DIX domain containing 111q23.1GSMA_I
PMID:cooccur
84959UBASH3BSTS-1 | STS1 | TULA-2 | TULA2 | p70ubiquitin associated and SH3 domain containing B11q24.1CV:PGCnp
6484ST3GAL4CGS23 | NANTA3 | SAT3 | SIAT4 | SIAT4C | ST3GalIV | STZST3 beta-galactoside alpha-2,3-sialyltransferase 411q24.2CV:PGCnp
11095ADAMTS8ADAM-TS8 | METH2ADAM metallopeptidase with thrombospondin type 1 motif 811q25CV:PGCnp
DMG:Wockner_2014
586BCAT1BCATC | BCT1 | ECA39 | MECA39 | PNAS121 | PP18branched chain amino acid transaminase 112p12.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
85004RERG-RAS like estrogen regulated growth inhibitor12p12.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
23085ERC1Cast2 | ELKS | ERC-1 | RAB6IP2ELKS/RAB6-interacting/CAST family member 112p13.3CV:GWASdb
CV:PGCnp
GO_Annotation
PROTEIN CLUSTERING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
81029WNT5B-wingless-type MMTV integration site family member 5B12p13.3CV:PGCnp
DMG:Montano_2016
1272CNTN1F3 | GP135 | MYPCNcontactin 112q12CV:PGCnp
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
440097DBX2-developing brain homeobox 212q12CV:PGCnp
DEG:Zhao_2015
269AMHR2AMHR | MISR2 | MISRII | MRIIanti-Mullerian hormone receptor type II12q13CV:PGCnp
552AVPR1AAVPR V1a | AVPR1 | V1aRarginine vasopressin receptor 1A12q14.2CV:PGCnp
PMID:cooccur
490ATP2B1PMCA1 | PMCA1kbATPase plasma membrane Ca2+ transporting 112q21.3CV:PGCnp
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
283431GAS2L3G2L3growth arrest specific 2 like 312q23.1CV:PGCnp
DMG:Nishioka_2013
3479IGF1IGF-I | IGFI | MGFinsulin like growth factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
9612NCOR2CTG26 | N-CoR2 | SMAP270 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC | TRAC-1 | TRAC1nuclear receptor corepressor 212q24CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
CompositeSet
Darnell FMRP targets
10645CAMKK2CAMKK | CAMKKBcalcium/calmodulin-dependent protein kinase kinase 212q24.2CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
23389MED13LMRFACD | PROSIT240 | THRAP2 | TRAP240Lmediator complex subunit 13 like12q24.21CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
92293TMEM132CPPP1R152transmembrane protein 132C12q24.32CV:PGCnp
26960NBEABCL8B | LYST2neurobeachin13q13CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
64881PCDH20PCDH13protocadherin 2013q21CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
11278KLF12AP-2rep | AP2REP | HSPC122Kruppel-like factor 1213q22CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
CompositeSet
114798SLITRK1LRRC12 | TTMSLIT and NTRK like family member 113q31.1CV:PGCnp
GO_Annotation
PMID:cooccur
10160FARP1CDEP | FARP1-IT1 | PLEKHC2 | PPP1R75FERM, ARH/RhoGEF and pleckstrin domain protein 113q32.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
29091STXBP6HSPC156 | amisynsyntaxin binding protein 614q12CV:GWASdb
CV:PGCnp
Expression
GSMA_I
EXOCYTOSIS
9985REC8HR21spB | REC8L1 | Rec8pREC8 meiotic recombination protein14q12CV:PGCnp
GSMA_I
PMID:cooccur
112399EGLN3HIFP4H3 | HIFPH3 | PHD3egl-9 family hypoxia-inducible factor 314q13.1CV:GWASdb
CV:PGCnp
GSMA_I
145581LRFN5C14orf146 | FIGLER8 | SALM5leucine rich repeat and fibronectin type III domain containing 514q21.1CV:PGCnp
PMID:cooccur
22795NID2NID-2nidogen 214q22.1CV:PGCnp
DMG:Wockner_2014
11183MAP4K5GCKR | KHS | KHS1 | MAPKKKK5mitogen-activated protein kinase kinase kinase kinase 514q22.1CV:PGCnp
3091HIF1AHIF-1-alpha | HIF-1A | HIF-1alpha | HIF1 | HIF1-ALPHA | MOP1 | PASD8 | bHLHe78hypoxia inducible factor 1 alpha subunit14q23.2CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
9495AKAP5AKAP75 | AKAP79 | H21A-kinase anchoring protein 514q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
7043TGFB3ARVD | ARVD1 | LDS5 | RNHF | TGF-beta3transforming growth factor beta 314q24CV:PGCnp
677ZFP36L1BRF1 | Berg36 | ERF-1 | ERF1 | RNF162B | TIS11B | cMG1ZFP36 ring finger protein-like 114q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
64207IRF2BPLC14orf4 | EAP1interferon regulatory factor 2 binding protein-like14q24.3CV:PGCnp
DMG:Jaffe_2016
5641LGMNAEP | LGMN1 | PRSC1legumain14q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
440193CCDC88CDAPLE | HKRP2 | KIAA1509 | SCA40coiled-coil domain containing 88C14q32.11CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
26585GREM1C15DUPq | CKTSF1B1 | CRAC1 | CRCS4 | DAND2 | DRM | DUP15q | GREMLIN | HMPS | HMPS1 | IHG-2 | MPSH | PIG2gremlin 1, DAN family BMP antagonist15q13.3CNV:YES
CV:PGCnp
GO_Annotation
90427BMF-Bcl2 modifying factor15q14CV:PGCnp
DMG:Jaffe_2016
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
256586LYSMD2-LysM domain containing 215q21.2CV:PGCnp
DMG:Wockner_2014
283659PRTGIGDCC5protogenin15q21.3CV:GWASdb
CV:PGCnp
10116FEM1BF1A-ALPHA | F1AA | FEM1-betafem-1 homolog b (C. elegans)15q22DMG:Nishioka_2013
4016LOXL1LOL | LOXLlysyl oxidase like 115q22CV:PGCnp
CV:PheWAS
1381CRABP1CRABP | CRABP-I | CRABPI | RBP5cellular retinoic acid binding protein 115q24CV:PGCnp
56905C15orf39-chromosome 15 open reading frame 3915q24.2CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Ascano FMRP targets
84206MEX3BMEX-3B | RKHD3 | RNF195mex-3 RNA binding family member B15q25.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8479HIRIP3-HIRA interacting protein 316p11.2CNV:YES
CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
7041TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 116p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
5579PRKCBPKC-beta | PKCB | PRKCB1 | PRKCB2protein kinase C beta16p11.2CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8651SOCS1CIS1 | CISH1 | JAB | SOCS-1 | SSI-1 | SSI1 | TIP3suppressor of cytokine signaling 116p13.13CV:PGCnp
DMG:Nishioka_2013
84662GLIS2NKL | NPHP7GLIS family zinc finger 216p13.3CV:PGCnp
GO_Annotation
124460SNX20SLIC1sorting nexin 2016q12.1CV:PGCnp
170692ADAMTS18ADAMTS21 | KNO2 | MMCATADAM metallopeptidase with thrombospondin type 1 motif 1816q23CV:PGCnp
DNM:Gulsuner_2013
85445CNTNAP4CASPR4contactin associated protein-like 416q23.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
230ALDOCALDCaldolase, fructose-bisphosphate C17cen-q12PMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6720SREBF1SREBP-1c | SREBP1 | SREBP1a | bHLHd1sterol regulatory element binding transcription factor 117p11.2CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
60528ELAC2COXPD17 | ELC2 | HPC2elaC ribonuclease Z 217p11.2CV:PGCnp
DMG:Jaffe_2016
4239MFAP4-microfibrillar associated protein 417p11.2CV:PGCnp
GO_Annotation
4628MYH10NMMHC-IIB | NMMHCBmyosin, heavy chain 10, non-muscle17p13CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5176SERPINF1EPC-1 | OI12 | OI6 | PEDF | PIG35serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 117p13.3CV:PGCnp
GO_Annotation
162494RHBDL3RHBDL4 | VRHOrhomboid, veinlet-like 3 (Drosophila)17q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6356CCL11SCYA11C-C motif chemokine ligand 1117q12CV:PGCnp
PMID:cooccur
124842TMEM132EDFNB99transmembrane protein 132E17q12CV:PGCnpAscano FMRP targets
8396PIP4K2BPI5P4KB | PIP5K2B | PIP5KIIB | PIP5KIIbeta | PIP5P4KBphosphatidylinositol-5-phosphate 4-kinase, type II, beta17q12CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3487IGFBP4BP-4 | HT29-IGFBP | IBP4 | IGFBP-4insulin like growth factor binding protein 417q21.2CV:PGCnp
PMID:cooccur
124857WFIKKN2GASP-1 | WFDC20B | WFIKKNRP | hGASP-1WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 217q21.33CV:PGCnp
DMG:Wockner_2014
8913CACNA1GCa(V)T.1 | Cav3.1 | NBR13 | SCA42calcium voltage-gated channel subunit alpha1 G17q22CV:PGCnpCompositeSet
Darnell FMRP targets
Potential synaptic genes
9123SLC16A3MCT 3 | MCT 4 | MCT-3 | MCT-4 | MCT3 | MCT4solute carrier family 16 member 317q25CV:PGCnp
DMG:Wockner_2014
1000CDH2CD325 | CDHN | CDw325 | NCADcadherin 218q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Ascano FMRP targets
Potential synaptic genes
83539CHST9GALNAC4ST-2 | GalNAc4ST2carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 918q11.2CV:GWASdb
CV:PGCnp
PMID:cooccur
284252KCTD1C18orf5 | SENSpotassium channel tetramerization domain containing 118q11.2CV:PGCnp
DMG:Jaffe_2016
25925ZNF521EHZF | Evi3zinc finger protein 52118q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Darnell FMRP targets
Ascano FMRP targets
4152MBD1CXXC3 | PCM1 | RFTmethyl-CpG binding domain protein 118q21CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
1630DCCCRC18 | CRCR1 | IGDCC1 | MRMV1 | NTN1R1DCC netrin 1 receptor18q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
9480ONECUT2OC-2 | OC2one cut homeobox 218q21.31CV:PGCnp
DMG:Jaffe_2016
220441RNF152-ring finger protein 15218q21.33CV:PGCnp
Expression
81832NETO1BCTL1 | BTCL1neuropilin and tolloid like 118q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Potential synaptic genes
6511SLC1A6EAAT4solute carrier family 1 member 619p13.12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
3727JUNDAP-1jun D proto-oncogene19p13.2CV:PGCnp
PMID:cooccur
4782NFICCTF | CTF5 | NF-I | NFInuclear factor I/C (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
4784NFIXMRSHSS | NF1A | SOTOS2nuclear factor I/X (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
9745ZNF536-zinc finger protein 53619q12CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
56301SLC7A10ASC1 | HASC-1 | asc-1solute carrier family 7 member 1019q13.1CV:PGCnp
PMID:cooccur
94274PPP1R14ACPI-17 | CPI17 | PPP1INLprotein phosphatase 1 regulatory inhibitor subunit 14A19q13.1CV:PGCnp
DMG:Wockner_2014
7305TYROBPDAP12 | KARAP | PLOSLTYRO protein tyrosine kinase binding protein19q13.12PMID:cooccur
5296PIK3R2MPPH | MPPH1 | P85B | p85 | p85-BETAphosphoinositide-3-kinase regulatory subunit 219q13.2-q13.4CV:PGCnp
DMG:Wockner_2014
Network
284358MAMSTRMASTRMEF2 activating motif and SAP domain containing transcriptional regulator19q13.33CV:PGCnp
DMG:Wockner_2014
126868MAB21L3C1orf161mab-21-like 3 (C. elegans)1p13.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10100TSPAN2NET3 | TSN2 | TSPAN-2tetraspanin 21p13.2CV:PGCnp
GSMA_I
GSMA_IIA
22854NTNG1Lmnt1netrin G11p13.3Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
257194NEGR1DMML2433 | IGLON4 | KILON | Ntraneuronal growth regulator 11p31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
5733PTGER3EP3 | EP3-I | EP3-II | EP3-III | EP3-IV | EP3-VI | EP3e | PGE2-Rprostaglandin E receptor 31p31.2CV:PGCnp
GSMA_IIA
PMID:cooccur
57685CACHD1-cache domain containing 11p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
Ascano FMRP targets
284716RIMKLAFAM80A | NAAGS | NAAGS-IIribosomal modification protein rimK-like family member A1p34.2CV:PGCnp
22887FOXJ3-forkhead box J31p34.2CV:PGCnp
DMG:Jaffe_2016
284654RSPO1CRISTIN3 | RSPOR-spondin 11p34.3CV:PGCnp
DMG:Jaffe_2016
2048EPHB2CAPB | DRT | EK5 | EPHT3 | ERK | Hek5 | PCBC | Tyro5EPH receptor B21p36.1-p35CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Potential synaptic genes
4237MFAP2MAGP | MAGP-1 | MAGP1microfibrillar associated protein 21p36.1-p35CV:PGCnp
712C1QA-complement component 1, q subcomponent, A chain1p36.12CV:PGCnp
PMID:cooccur
27245AHDC1MRD25AT-hook DNA binding motif containing 11p36.13CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23569PADI4PAD | PAD4 | PADI5 | PDI4 | PDI5peptidyl arginine deiminase, type IV1p36.13CV:GWASdb
CV:PGCnp
PMID:cooccur
9696CROCCROLTciliary rootlet coiled-coil, rootletin1p36.13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
23254KAZNKAZkazrin, periplakin interacting protein1p36.21CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
4000LMNACDCD1 | CDDC | CMD1A | CMT2B1 | EMD2 | FPL | FPLD | FPLD2 | HGPS | IDC | LDP1 | LFP | LGMD1B | LMN1 | LMNC | LMNL1 | PRO1lamin A/C1q22CV:PGCnp
Expression
GSMA_I
GSMA_IIA
Network
PMID:cooccur
54856GON4LGON-4 | GON4 | YARPgon-4 like1q22CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Ascano FMRP targets
4921DDR2MIG20a | NTRKR3 | TKT | TYRO10discoidin domain receptor tyrosine kinase 21q23.3CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
10560SLC19A2TC1 | THMD1 | THT1 | THTR1 | TRMAsolute carrier family 19 member 21q23.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
5396PRRX1AGOTC | PHOX1 | PMX1 | PRX-1 | PRX1paired related homeobox 11q24CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
1604CD55CR | CROM | DAF | TCCD55 molecule (Cromer blood group)1q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
4139MARK1MARK | Par-1c | Par1cmicrotubule affinity regulating kinase 11q41CV:PGCnp
PMID:cooccur
5629PROX1-prospero homeobox 11q41CV:GWASdb
CV:PGCnp
PMID:cooccur
64754SMYD3KMT3E | ZMYND1 | ZNFN3A1 | bA74P14.1SET and MYND domain containing 31q44CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
10741RBBP9BOG | RBBP10retinoblastoma binding protein 920p11.2CV:PGCnp
GSMA_I
9770RASSF2CENP-34 | RASFADINRas association domain family member 220p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9139CBFA2T2EHT | MTGR1 | ZMYND3 | p85core-binding factor, runt domain, alpha subunit 2; translocated to, 220q11CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
3929LBPBPIFD2lipopolysaccharide binding protein20q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
90187EMILIN3C20orf130 | EMILIN5 | dJ620E11.4elastin microfibril interfacer 320q12CV:PGCnp
DMG:Wockner_2014
2139EYA2EAB1EYA transcriptional coactivator and phosphatase 220q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
57580PREX1P-REX1phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 120q13.13CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
1137CHRNA4BFNC | EBN | EBN1 | NACHR | NACHRA4 | NACRA4cholinergic receptor nicotinic alpha 4 subunit20q13.33CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
30811HUNK-hormonally up-regulated Neu-associated kinase21q22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5316PKNOX1PREP1 | pkonx1cPBX/knotted 1 homeobox 121q22.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
5297PI4KAPI4K-ALPHA | PIK4CA | PMGYCHA | pi4K230phosphatidylinositol 4-kinase alpha22q11.21Association
CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
65078RTN4RNGR | NOGORreticulon 4 receptor22q11.21Association
CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
4282MIFGIF | GLIF | MMIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)22q11.23DNM:Fromer_2014
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
84168ANTXR1ATR | GAPO | TEM8anthrax toxin receptor 12p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9792SERTAD2Sei-2 | TRIP-Br2SERTA domain containing 22p14CV:PGCnp
DMG:Jaffe_2016
4211MEIS1-Meis homeobox 12p14CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
23683PRKD3EPK2 | PKC-NU | PKD3 | PRKCN | nPKC-NUprotein kinase D32p21CV:PGCnp
LK:YES
PMID:cooccur
10602CDC42EP3BORG2 | CEP3 | UB1CDC42 effector protein 32p21CV:GWASdb
CV:PGCnp
PMID:cooccur
25797QPCTGCT | QC | sQCglutaminyl-peptide cyclotransferase2p22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
4613MYCNMODED | N-myc | NMYC | ODED | bHLHe37v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog2p24.3CV:PGCnp
DMG:Jaffe_2016
1844DUSP2PAC-1 | PAC1dual specificity phosphatase 22q11CV:PGCnp
GSMA_I
PMID:cooccur
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
57628DPP10DPL2 | DPPY | DPRP-3 | DPRP3dipeptidyl peptidase like 102q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
7247TSNBCLF-1 | C3PO | RCHF1 | REHF-1 | TBRBP | TRSLNtranslin2q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
4929NR4A2HZF-3 | NOT | NURR1 | RNR1 | TINURnuclear receptor subfamily 4 group A member 22q22-q23Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
PMID:cooccur
130576LYPD6BCT116 | LYPD7LY6/PLAUR domain containing 6B2q23.2CV:GWASdb
CV:PGCnp
7130TNFAIP6TSG-6 | TSG6TNF alpha induced protein 62q23.3CV:PGCnp
GSMA_IIA
8502PKP4p0071plakophilin 42q24.1CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
57818G6PC2IGRPglucose-6-phosphatase catalytic subunit 22q24.3CV:GWASdb
CV:PGCnp
Expression
GSMA_IIA
83879CDCA7JPO1cell division cycle associated 72q31CV:PGCnp
DNM:Fromer_2014
CompositeSet
8609KLF7UKLFKruppel-like factor 7 (ubiquitous)2q32CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
5136PDE1ACAM-PDE-1A | HCAM-1 | HCAM1 | HSPDE1Aphosphodiesterase 1A2q32.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
165215FAM171BKIAA1946family with sequence similarity 171 member B2q32.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
10152ABI2ABI-2 | ABI2B | AIP-1 | AblBP3 | SSH3BP2 | argBP1 | argBPIA | argBPIBabl-interactor 22q33CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
STRUCTURAL PLASTICITY
CompositeSet
26010SPATS2LDNAPTP6 | SGNPspermatogenesis associated serine rich 2 like2q33.1CV:GWASdb
CV:PGCnp
LK:YES
8828NRP2NP2 | NPN2 | PRO2714 | VEGF165R2neuropilin 22q33.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
9759HDAC4AHO3 | BDMR | HA6116 | HD4 | HDAC-4 | HDAC-A | HDACAhistone deacetylase 42q37.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
8864PER2FASPS | FASPS1period circadian clock 22q37.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
117581TWIST2AMS | BBRSAY | DERMO1 | FFDD3 | SETLSS | bHLHa39twist family bHLH transcription factor 22q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
6092ROBO2SAX3roundabout guidance receptor 23p12.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
23429RYBPAAP1 | APAP-1 | DEDAF | YEAF1RING1 and YY1 binding protein3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
27086FOXP112CC4 | HSPC215 | MFH | QRF1 | hFKH1Bforkhead box P13p14.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
1849DUSP7MKPX | PYST2dual specificity phosphatase 73p21CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
55349CHDH-choline dehydrogenase3p21.1CV:PGCnp
DEG:Zhao_2015
55799CACNA2D3HSA272268calcium voltage-gated channel auxiliary subunit alpha2delta 33p21.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
79012CAMKV1G5 | VACAMKLCaM kinase-like vesicle-associated3p21.31CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
27303RBMS3-RNA binding motif, single stranded interacting protein 33p24-p23CV:GWASdb
CV:PGCnp
GSMA_I
7476WNT7A-wingless-type MMTV integration site family member 7A3p25CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
1295COL8A1C3orf7collagen type VIII alpha 13q12.3GSMA_IIA
GSMA_IIE
PMID:cooccur
151887CCDC80DRO1 | SSG1 | URB | okuribincoiled-coil domain containing 803q13.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
1475CSTAAREI | PSS4 | STF1 | STFAcystatin A3q21CV:PGCnp
DMG:vanEijk_2014
54437SEMA5BSEMAG | SemGsemaphorin 5B3q21.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
2047EPHB1ELK | EPHT2 | Hek6 | NETEPH receptor B13q22.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
7881KCNAB1AKR6A3 | KCNA1B | KV-BETA-1 | Kvb1.3 | hKvBeta3 | hKvb3potassium voltage-gated channel subfamily A member regulatory beta subunit 13q26.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
EXCITABILITY
131408FAM131AC3orf40 | FLAT715 | PRO1378family with sequence similarity 131 member A3q27.1DMG:Wockner_2014
2557GABRA4-gamma-aminobutyric acid type A receptor alpha4 subunit4p12CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
2560GABRB1-gamma-aminobutyric acid type A receptor beta1 subunit4p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9353SLIT2SLIL3 | Slit-2slit guidance ligand 24p15.2CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
Ascano FMRP targets
Potential synaptic genes
886CCKARCCK-A | CCK1-R | CCK1R | CCKRAcholecystokinin A receptor4p15.2Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
84448ABLIM2-actin binding LIM protein family member 24p16.1CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
10417SPON2DIL-1 | DIL1 | M-SPONDIN | MINDINspondin 24p16.3CV:PGCnp
GO_Annotation
2044EPHA5CEK7 | EHK-1 | EHK1 | EK7 | HEK7 | TYRO4EPH receptor A54q13.1CV:PGCnp
CV:PheWAS
25849PARM1Cipar1 | DKFZP564O0823 | PARM-1 | WSC4prostate androgen-regulated mucin-like protein 14q13.3-q21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
651BMP3BMP-3Abone morphogenetic protein 34q21CV:PGCnp
DMG:Jaffe_2016
10144FAM13AARHGAP48 | FAM13A1family with sequence similarity 13 member A4q22.1CV:GWAScat
CV:PGCnp
CV:PheWAS
Ascano FMRP targets
5311PKD2APKD2 | PC2 | PKD4 | Pc-2 | TRPP2polycystin 2, transient receptor potential cation channel4q22.1CV:PGCnp
CV:PheWAS
8404SPARCL1MAST 9 | MAST9 | PIG33 | SC1SPARC like 14q22.1CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
9061PAPSS1ATPSK1 | PAPSS | SK13'-phosphoadenosine 5'-phosphosulfate synthase 14q24CV:PGCnp
DMG:Nishioka_2013
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
81579PLA2G12AGXII | PLA2G12 | ROSSYphospholipase A2 group XIIA4q25CV:PGCnp
DMG:Wockner_2014
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
27123DKK2DKK-2dickkopf WNT signaling pathway inhibitor 24q25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
57575PCDH10OL-PCDH | PCDH19protocadherin 104q28.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
54510PCDH18PCDH68Lprotocadherin 184q31CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
2983GUCY1B3GC-S-beta-1 | GC-SB3 | GUC1B3 | GUCB3 | GUCSB3 | GUCY1B1guanylate cyclase 1, soluble, beta 34q31.3-q33CV:PGCnp
DMG:Wockner_2014
Expression
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
2982GUCY1A3GC-SA3 | GUC1A3 | GUCA3 | GUCSA3 | GUCY1A1 | MYMY6guanylate cyclase 1, soluble, alpha 34q32.1CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
23022PALLDCGI-151 | CGI151 | MYN | PNCA1 | SIH002palladin, cytoskeletal associated protein4q32.3CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
6507SLC1A3EA6 | EAAT1 | GLAST | GLAST1solute carrier family 1 member 35p13CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
1601DAB2DOC-2 | DOC2Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)5p13.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
1008CDH10-cadherin 105p14.2CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
57491AHRRAHH | AHHR | bHLHe77aryl-hydrocarbon receptor repressor5p15.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
57688ZSWIM6AFNDzinc finger SWIM-type containing 65q12.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
10085EDIL3DEL1EGF like repeats and discoidin domains 35q14CV:GWASdb
CV:PGCnp
171019ADAMTS19-ADAM metallopeptidase with thrombospondin type 1 motif 195q23.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
337876CHSY3CHSY2 | CSS3chondroitin sulfate synthase 35q23.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Ascano FMRP targets
4090SMAD5DWFC | JV5-1 | MADH5SMAD family member 55q31CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
8974P4HA2-prolyl 4-hydroxylase subunit alpha 25q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
2890GRIA1GLUH1 | GLUR1 | GLURA | GluA1 | HBGR1glutamate ionotropic receptor AMPA type subunit 15q31.1Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3659IRF1IRF-1 | MARinterferon regulatory factor 15q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
5159PDGFRBCD140B | IBGC4 | IMF1 | JTK12 | KOGS | PDGFR | PDGFR-1 | PDGFR1 | PENTTplatelet derived growth factor receptor beta5q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
23367LARP1LARPLa ribonucleoprotein domain family member 15q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
2554GABRA1ECA4 | EIEE19 | EJM | EJM5gamma-aminobutyric acid type A receptor alpha1 subunit5q34ADT:Sun_2012
Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2561GABRB2-gamma-aminobutyric acid type A receptor beta2 subunit5q34Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
8817FGF18FGF-18 | ZFGF5fibroblast growth factor 185q34Association
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
4488MSX2CRS2 | FPP | HOX8 | MSH | PFM | PFM1msh homeobox 25q35.2CV:PGCnp
GSMA_IIA
PMID:cooccur
9260PDLIM7LMP1 | LMP3PDZ and LIM domain 75q35.3CV:PGCnp
GSMA_IIA
Network
57497LRFN2FIGLER2 | KIAA1246 | SALM1leucine rich repeat and fibronectin type III domain containing 26p21.2-p21.1CV:PGCnp
GSMA_I
GSMA_IIE
Potential synaptic genes
3135HLA-GMHC-Gmajor histocompatibility complex, class I, G6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3400ID4IDB4 | bHLHb27inhibitor of DNA binding 4, HLH protein6p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
9308CD83BL11 | HB15CD83 molecule6p23CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
221692PHACTR1RPEL | RPEL1 | dJ257A7.2phosphatase and actin regulator 16p24.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
4739NEDD9CAS-L | CAS2 | CASL | CASS2 | HEF1neural precursor cell expressed, developmentally down-regulated 96p24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
54438GFOD1ADG-90 | C6orf114glucose-fructose oxidoreductase domain containing 16pter-p22.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GSMA_I
CompositeSet
22881ANKRD6-ankyrin repeat domain 66q15CV:PGCnp
DMG:Wockner_2014
2045EPHA7EHK-3 | EHK3 | EK11 | HEK11EPH receptor A76q16.1CV:GWASdb
CV:PGCnp
8936WASF1SCAR1 | WAVE | WAVE1WAS protein family member 16q21CV:PGCnp
DEG:Maycox_2009
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5980REV3LPOLZ | REV3REV3 like, DNA directed polymerase zeta catalytic subunit6q21CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
5167ENPP1ARHR2 | COLED | M6S1 | NPP1 | NPPS | PC-1 | PCA1 | PDNP1ectonucleotide pyrophosphatase/phosphodiesterase 16q22-q23CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
3097HIVEP2HIV-EP2 | MBP-2 | MIBP1 | SHN2 | ZAS2 | ZNF40Bhuman immunodeficiency virus type I enhancer binding protein 26q23-q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
389432SAMD5dJ875H10.1sterile alpha motif domain containing 56q24.3CV:GWASdb
CV:PGCnp
Expression
2099ESR1ER | ESR | ESRA | ESTRR | Era | NR3A1estrogen receptor 16q25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
Network
PMID:cooccur
26230TIAM2STEF | TIAM-2T-cell lymphoma invasion and metastasis 26q25.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
135138PACRGGLUP | HAK005771 | PARK2CRGPARK2 co-regulated6q26CV:PGCnp
DMG:Wockner_2014
358AQP1AQP-CHIP | CHIP28 | COaquaporin 1 (Colton blood group)7p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
273AMPHAMPH1amphiphysin7p14-p13CV:PGCnp
GO_Annotation
Network
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
196AHRbHLHe76aryl hydrocarbon receptor7p15CV:PGCnp
PMID:cooccur
3624INHBAEDF | FRPinhibin beta A7p15-p13CV:PGCnp
GO_Annotation
9586CREB5CRE-BPA | CREB-5cAMP responsive element binding protein 57p15.1CV:PGCnp
DEG:Zhao_2015
80727TTYH3-tweety family member 37p22CV:PGCnpION BALANCE
CompositeSet
Darnell FMRP targets
83698CALN1CABP8calneuron 17q11CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2006ELNSVAS | WBS | WSelastin7q11.23CNV:YES
CV:PGCnp
GO_Annotation
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
375612LHFPL3LHFPL4lipoma HMGIC fusion partner-like 37q22.2CV:PGCnp
83992CTTNBP2C7orf8 | CORTBP2 | Orf4cortactin binding protein 27q31CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
9732DOCK4-dedicator of cytokinesis 47q31.1CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
27147DENND2AFAM31D | KIAA1277DENN domain containing 2A7q34CV:PGCnp
79698ZMAT4-zinc finger matrin-type 48p11.21CV:PGCnp
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
9583ENTPD4LALP70 | LAP70 | LYSAL1 | NTPDase-4 | UDPaseectonucleoside triphosphate diphosphohydrolase 48p21.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
23221RHOBTB2DBC2Rho related BTB domain containing 28p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
1508CTSBAPPS | CPSBcathepsin B8p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
79660PPP1R3BGL | PPP1R4 | PTGprotein phosphatase 1 regulatory subunit 3B8p23.1CV:PGCnp
83595SOX7-SRY-box 78p23.1CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
23213SULF1SULF-1sulfatase 18q13.2CV:PGCnp
DMG:Wockner_2014
4325MMP16C8orf57 | MMP-X2 | MT-MMP2 | MT-MMP3 | MT3-MMPmatrix metallopeptidase 168q21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
LK:YES
PMID:cooccur
862RUNX1T1AML1-MTG8 | AML1T1 | CBFA2T1 | CDR | ETO | MTG8 | ZMYND2runt related transcription factor 1; translocated to, 1 (cyclin D related)8q22CV:PGCnp
DMG:Wockner_2014
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
157657C8orf37CORD16 | RP64 | smalltalkchromosome 8 open reading frame 378q22.1CV:PGCnp
DMG:Wockner_2014
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
340419RSPO2CRISTIN2R-spondin 28q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
8581LY6DE48 | Ly-6Dlymphocyte antigen 6 complex, locus D8q24CV:PGCnp
5168ENPP2ATX | ATX-X | AUTOTAXIN | LysoPLD | NPP2 | PD-IALPHA | PDNP2ectonucleotide pyrophosphatase/phosphodiesterase 28q24.1CV:PGCnp
PMID:cooccur
10584COLEC10CLL1collectin subfamily member 108q24.12CV:PGCnp
CV:PheWAS
10397NDRG1CAP43 | CMT4D | DRG-1 | DRG1 | GC4 | HMSNL | NDR1 | NMSL | PROXY1 | RIT42 | RTP | TARG1 | TDD5N-myc downstream regulated 18q24.3CV:PGCnp
DEG:Zhao_2015
Network
203228C9orf72ALSFTD | FTDALS | FTDALS1chromosome 9 open reading frame 729p21.2CV:PGCnp
Expression
PMID:cooccur
6505SLC1A1DCBXA | EAAC1 | EAAT3 | SCZD18solute carrier family 1 member 19p24CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
2619GAS1-growth arrest specific 19q21.3-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
4915NTRK2GP145-TrkB | TRKB | trk-Bneurotrophic tyrosine kinase, receptor, type 29q22.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
116443GRIN3AGluN3A | NMDAR-L | NR3Aglutamate ionotropic receptor NMDA type subunit 3A9q31.1CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
153090DAB2IPAF9Q34 | AIP-1 | AIP1 | DIP1/2DAB2 interacting protein9q33.1-q33.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5069PAPPAASBABP2 | DIPLA1 | IGFBP-4ase | PAPA | PAPP-A | PAPPA1pregnancy-associated plasma protein A, pappalysin 19q33.2CV:GWASdb
CV:PGCnp
5900RALGDSRGDS | RGF | RalGEFral guanine nucleotide dissociation stimulator9q34.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Guipponi_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
8242KDM5CDXS1272E | JARID1C | MRX13 | MRXJ | MRXSCJ | MRXSJ | SMCX | XE169lysine demethylase 5CXp11.22-p11.21CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
Potential synaptic genes
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
1654DDX3XCAP-Rf | DBX | DDX14 | DDX3 | HLP2 | MRX102DEAD-box helicase 3, X-linkedXp11.3-p11.23CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
30011SH3KBP1CD2BP3 | CIN85 | GIG10 | HSB-1 | HSB1 | MIG18SH3-domain kinase binding protein 1Xp22.1-p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2824GPM6BM6Bglycoprotein M6BXp22.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Potential synaptic genes
367ARAIS | AR8 | DHTR | HUMARA | HYSP1 | KD | NR3C4 | SBMA | SMAX1 | TFMandrogen receptorXq12Association
CV:PGCnp
GO_Annotation
GR_Ng
Network
PMID:cooccur
51566ARMCX3ALEX3 | GASP6 | dJ545K15.2armadillo repeat containing, X-linked 3Xq22.1CV:PGCnp