Search results: The pahtway p2570 has 118 genes in the original annotation. Currently, there are 66 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
84898PLXDC2TEM7Rplexin domain containing 210p12.31CV:PGCnp
DMG:Nishioka_2013
3433IFIT2G10P2 | GARG-39 | IFI-54 | IFI-54K | IFI54 | IFIT-2 | ISG-54 K | ISG-54K | ISG54 | P54 | cig42interferon induced protein with tetratricopeptide repeats 210q23.31CV:PGCnp
PMID:cooccur
26509MYOFFER1L3myoferlin10q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
5654HTRA1ARMD7 | CADASIL2 | CARASIL | HtrA | L56 | ORF480 | PRSS11HtrA serine peptidase 110q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
283209PGM2L1BM32A | PMMLPphosphoglucomutase 2-like 111q13.4CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
11098PRSS23SIG13 | SPUVE | ZSIG13protease, serine 2311q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
3606IL18IGIF | IL-18 | IL-1g | IL1F4interleukin 1811q23.1Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
6330SCN4BATFB17 | LQT10 | Navbeta4sodium voltage-gated channel beta subunit 411q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
EXCITABILITY
84959UBASH3BSTS-1 | STS1 | TULA-2 | TULA2 | p70ubiquitin associated and SH3 domain containing B11q24.1CV:PGCnp
9638FEZ1UNC-76fasciculation and elongation protein zeta 111q24.2Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
79887PLBD1-phospholipase B domain containing 112p13.1CV:PGCnp
8835SOCS2CIS2 | Cish2 | SOCS-2 | SSI-2 | SSI2 | STATI2suppressor of cytokine signaling 212qCV:PGCnp
PMID:cooccur
784CACNB3CAB3 | CACNLB3calcium voltage-gated channel auxiliary subunit beta 312q13CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
429ASCL1ASH1 | HASH1 | MASH1 | bHLHa46achaete-scute family bHLH transcription factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
55504TNFRSF19TAJ | TAJ-alpha | TRADE | TROYtumor necrosis factor receptor superfamily member 1913q12.11-q12.3CV:PGCnp
CV:PheWAS
55647RAB20-RAB20, member RAS oncogene family13q34CV:GWASdb
CV:PGCnp
145741C2CD4AFAM148A | NLF1C2 calcium-dependent domain containing 4A15q22.2CV:PGCnp
CV:PheWAS
89927C16orf45-chromosome 16 open reading frame 4516p13.11CNV:YES
CV:PGCnp
GSMA_IIE
2013EMP2XMPepithelial membrane protein 216p13.2CV:PGCnp
DMG:Montano_2016
64127NOD2ACUG | BLAU | CARD15 | CD | CLR16.3 | IBD1 | NLRC2 | NOD2B | PSORAS1nucleotide binding oligomerization domain containing 216q21CV:PGCnp
DMG:Montano_2016
Expression
GSMA_IIE
PMID:cooccur
25894PLEKHG4ARHGEF44 | PRTPHN1 | SCA4pleckstrin homology and RhoGEF domain containing G416q22.1CV:PGCnp
Expression
Ascano FMRP targets
4239MFAP4-microfibrillar associated protein 417p11.2CV:PGCnp
GO_Annotation
26115TANC2ROLSA | rolstetratricopeptide repeat, ankyrin repeat and coiled-coil containing 217q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8811GALR2GAL2-R | GALNR2 | GALR-2galanin receptor 217q25.3GO_Annotation
PMID:cooccur
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
7138TNNT1ANM | NEM5 | STNT | TNT | TNTStroponin T1, slow skeletal type19q13.4DMG:Wockner_2014
PMID:cooccur
54879ST7LFAM4B | ST7R | STLRsuppression of tumorigenicity 7 like1p13.2CV:PGCnp
GSMA_I
29957SLC25A24APC1 | SCAMC-1solute carrier family 25 member 241p13.3CV:PGCnp
5733PTGER3EP3 | EP3-I | EP3-II | EP3-III | EP3-IV | EP3-VI | EP3e | PGE2-Rprostaglandin E receptor 31p31.2CV:PGCnp
GSMA_IIA
PMID:cooccur
79971WLSC1orf139 | EVI | GPR177 | MRP | mig-14wntless Wnt ligand secretion mediator1p31.3CV:PGCnp
GSMA_IIA
PMID:cooccur
284716RIMKLAFAM80A | NAAGS | NAAGS-IIribosomal modification protein rimK-like family member A1p34.2CV:PGCnp
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1953MEGF6EGFL3multiple EGF like domains 61p36.3CV:PGCnp
DMG:Wockner_2014
6277S100A62A9 | 5B10 | CABP | CACY | PRAS100 calcium binding protein A61q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
58494JAM2C21orf43 | CD322 | JAM-B | JAMB | PRO245 | VE-JAM | VEJAMjunctional adhesion molecule 221q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
54102CLIC6CLIC1Lchloride intracellular channel 621q22.12CV:PGCnp
DMG:Nishioka_2013
Network
65055REEP1C2orf23 | HMN5B | SPG31 | Yip2areceptor accessory protein 12p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3797KIF3C-kinesin family member 3C2p23CV:PGCnpCompositeSet
Darnell FMRP targets
93082NEURL3LINCRneuralized E3 ubiquitin protein ligase 32q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
6344SCTRSRsecretin receptor2q14.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
Potential synaptic genes
130576LYPD6BCT116 | LYPD7LY6/PLAUR domain containing 6B2q23.2CV:GWASdb
CV:PGCnp
3485IGFBP2IBP2 | IGF-BP53insulin like growth factor binding protein 22q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
26032SUSD5-sushi domain containing 53p22.3CV:PGCnp
GSMA_I
23180RFTN1MIG2 | PIB10 | PIG9 | RAFTLINraftlin, lipid raft linker 13p24.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
Ascano FMRP targets
55287TMEM40-transmembrane protein 403p25.2CV:PGCnp
GSMA_I
6474SHOX2OG12 | OG12X | SHOTshort stature homeobox 23q25.32CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
3273HRGHPRG | HRGP | THPH11histidine rich glycoprotein3q27PMID:cooccur
84448ABLIM2-actin binding LIM protein family member 24p16.1CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
7366UGT2B15HLUG4 | UDPGT 2B8 | UDPGT2B15 | UDPGTH3 | UGT2B8UDP glucuronosyltransferase family 2 member B154q13DMG:Wockner_2014
79966SCD5ACOD4 | FADS4 | HSCD5 | SCD2 | SCD4stearoyl-CoA desaturase 54q21.22CV:PGCnp
DEG:Zhao_2015
Expression
10855HPSEHPA | HPA1 | HPR1 | HPSE1 | HSE1heparanase4q21.3CV:PGCnp
DMG:Jaffe_2016
50859SPOCK3HSAJ1454 | TES-3 | TICN3sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 34q32.3CV:PGCnp
166979CDC20BG6VTS76519cell division cycle 20B5q11.2CV:PGCnp
DMG:Jaffe_2016
4131MAP1BFUTSCH | MAP5 | PPP1R102microtubule associated protein 1B5q13CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
29993PACSIN1SDPIprotein kinase C and casein kinase substrate in neurons 16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Potential synaptic genes
1906EDN1ARCND3 | ET1 | HDLCQ7 | PPET1 | QMEendothelin 16p24.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
358AQP1AQP-CHIP | CHIP28 | COaquaporin 1 (Colton blood group)7p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
84182FAM188BC7orf67family with sequence similarity 188 member B7p14.3DMG:Wockner_2014
3624INHBAEDF | FRPinhibin beta A7p15-p13CV:PGCnp
GO_Annotation
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
81796SLCO5A1OATP-J | OATP-RP4 | OATP5A1 | OATPJ | OATPRP4 | SLC21A15solute carrier organic anion transporter family member 5A18q13.3CV:GWASdb
CV:PGCnp
6505SLC1A1DCBXA | EAAC1 | EAAT3 | SCZD18solute carrier family 1 member 19p24CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
5125PCSK5PC5 | PC6 | PC6A | SPC6proprotein convertase subtilisin/kexin type 59q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
51280GOLM1C9orf155 | GOLPH2 | GP73 | HEL46 | PSEC0257 | bA379P1.3golgi membrane protein 19q21.33CV:PGCnp
DMG:Wockner_2014
9355LHX2LH2 | hLhx2LIM homeobox 29q33.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur