Search results: The pahtway p2187 has 51 genes in the original annotation. Currently, there are 42 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
5979RETCDHF12 | CDHR16 | HSCR1 | MEN2A | MEN2B | MTC1 | PTC | RET-ELE1 | RET51ret proto-oncogene10q11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5916RARGNR1B3 | RARCretinoic acid receptor gamma12q13CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
1284COL4A2ICH | POREN2collagen type IV alpha 213q34CV:GWAScat
CV:GWASdb
CV:PGCnp
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
6376CX3CL1ABCD-3 | C3Xkine | CXC3 | CXC3C | NTN | NTT | SCYD1 | fractalkine | neurotactinC-X3-C motif chemokine ligand 116q13CV:PGCnp
PMID:cooccur
1009CDH11CAD11 | CDHOB | OB | OSF-4cadherin 1116q21CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
1800DPEP1MBD1 | MDP | RDPdipeptidase 1 (renal)16q24.3CV:PGCnp
GO_Annotation
5376PMP22CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110peripheral myelin protein 2217p12CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
2064ERBB2CD340 | HER-2 | HER-2/neu | HER2 | MLN 19 | NEU | NGL | TKR1erb-b2 receptor tyrosine kinase 217q12CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Ascano FMRP targets
3975LHX1LIM-1 | LIM1LIM homeobox 117q12CNV:YES
CV:PGCnp
GO_Annotation
PMID:cooccur
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
864RUNX3AML2 | CBFA3 | PEBP2aCrunt related transcription factor 31p36CV:PGCnp
DMG:vanEijk_2014
DNM:Gulsuner_2013
375790AGRNCMS8 | CMSPPDagrin1p36.33CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Darnell FMRP targets
4921DDR2MIG20a | NTRKR3 | TKT | TYRO10discoidin domain receptor tyrosine kinase 21q23.3CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
183AGTANHU | SERPINA8angiotensinogen1q42.2CV:PGCnp
GO_Annotation
PMID:cooccur
655BMP7OP-1bone morphogenetic protein 720q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
7078TIMP3HSMRK222 | K222 | K222TA2 | SFDTIMP metallopeptidase inhibitor 322q12.3Association
CV:PGCnp
GSMA_I
7039TGFATFGAtransforming growth factor alpha2p13CV:PGCnp
DMG:Montano_2016
Network
6382SDC1CD138 | SDC | SYND1 | syndecansyndecan 12p24.1CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
2487FRZBFRE | FRITZ | FRP-3 | FRZB-1 | FRZB-PEN | FRZB1 | FZRB | OS1 | SFRP3 | SRFP3 | hFIZfrizzled-related protein2q32.1CV:GWASdb
CV:PGCnp
Expression
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
3954LETM1-leucine zipper and EF-hand containing transmembrane protein 14p16.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
Ascano FMRP targets
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
1950EGFHOMG4 | URGepidermal growth factor4q25Association
CV:PGCnp
GR_Ng
GR_WM
Network
PMID:cooccur
1601DAB2DOC-2 | DOC2Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)5p13.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
3673ITGA2BR | CD49B | GPIa | HPA-5 | VLA-2 | VLAA2integrin subunit alpha 25q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
Ascano FMRP targets
6414SEPP1SELP | SEPP | SePselenoprotein P, plasma, 15q31CV:PGCnp
GO_Annotation
PMID:cooccur
7422VEGFAMVCD1 | VEGF | VPFvascular endothelial growth factor A6p12CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
3624INHBAEDF | FRPinhibin beta A7p15-p13CV:PGCnp
GO_Annotation
5154PDGFAPDGF-A | PDGF1platelet derived growth factor subunit A7p22DMG:Jaffe_2016
Expression
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
10512SEMA3CSEMAE | SemEsemaphorin 3C7q21-q31CV:PGCnp
DMG:Wockner_2014
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
284ANGPT1AGP1 | AGPT | ANG1angiopoietin 18q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur