Search results: The pahtway p3863 has 338 genes in the original annotation. Currently, there are 225 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
8829NRP1BDCA4 | CD304 | NP1 | NRP | VEGF165Rneuropilin 110p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
10659CELF2BRUNOL3 | CUGBP2 | ETR-3 | ETR3 | NAPORCUGBP, Elav-like family member 210p13CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
10133OPTNALS12 | FIP2 | GLC1E | HIP7 | HYPL | NRP | TFIIIA-INTPoptineurin10p13CV:PGCnp
DMG:Nishioka_2013
5264PHYHLN1 | LNAP1 | PAHX | PHYH1 | RDphytanoyl-CoA 2-hydroxylase10p13CV:PGCnp
GO_Annotation
PMID:cooccur
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
3778KCNMA1BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1potassium calcium-activated channel subfamily M alpha 110q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
1847DUSP5DUSP | HVH3dual specificity phosphatase 510q25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
8038ADAM12ADAM12-OT1 | CAR10 | MCMP | MCMPMltna | MLTN | MLTNAADAM metallopeptidase domain 1210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
966CD5916.3A5 | 1F5 | EJ16 | EJ30 | EL32 | G344 | HRF-20 | HRF20 | MAC-IP | MACIF | MEM43 | MIC11 | MIN1 | MIN2 | MIN3 | MIRL | MSK21 | p18-20CD59 molecule11p13CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
6506SLC1A2EAAT2 | GLT-1 | HBGTsolute carrier family 1 member 211p13Association
CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
975CD81CVID6 | S5.7 | TAPA1 | TSPAN28CD81 molecule11p15.5DMG:vanEijk_2014
DMG:Wockner_2014
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
6520SLC3A24F2 | 4F2HC | 4T2HC | CD98 | CD98HC | MDU1 | NACAEsolute carrier family 3 member 211q13CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
PMID:cooccur
CELL METABOLISM
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
2495FTH1FHC | FTH | FTHL6 | HFE5 | PIG15 | PLIFferritin, heavy polypeptide 111q13CV:PGCnp
PMID:cooccur
CompositeSet
1717DHCR7SLOS7-dehydrocholesterol reductase11q13.4CV:PGCnp
PMID:cooccur
330BIRC3AIP1 | API2 | CIAP2 | HAIP1 | HIAP1 | MALT2 | MIHC | RNF49 | c-IAP2baculoviral IAP repeat containing 311q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
4321MMP12HME | ME | MME | MMP-12matrix metallopeptidase 1211q22.3CV:GWASdb
CV:PGCnp
5962RDXDFNB24radixin11q23CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_I
1798DPAGT1ALG7 | CDG-Ij | CDG1J | CMS13 | CMSTA2 | D11S366 | DGPT | DPAGT | DPAGT2 | G1PT | GPT | UAGT | UGATdolichyl-phosphate N-acetylglucosaminephosphotransferase 111q23.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
54477PLEKHA5PEPP-2 | PEPP2pleckstrin homology domain containing A512p12CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
6489ST8SIA1GD3S | SIAT8 | SIAT8-A | SIAT8A | ST8SiaIST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 112p12.1-p11.2CV:PGCnp
Expression
1389CREBL2-cAMP responsive element binding protein like 212p13CV:PGCnp
DMG:Wockner_2014
81029WNT5B-wingless-type MMTV integration site family member 5B12p13.3CV:PGCnp
DMG:Montano_2016
928CD9BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29CD9 molecule12p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
55810FOXJ2FHXforkhead box J212p13.31CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
4891SLC11A2DCT1 | DMT1 | NRAMP2solute carrier family 11 member 212q13CV:PGCnp
PMID:cooccur
4234METTL1C12orf1 | TRM8 | TRMT8 | YDL201wmethyltransferase like 112q13Network
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
55716LMBR1LLIMRlimb development membrane protein 1 like12q13.12DMG:Wockner_2014
84790TUBA1CTUBA6 | bcm948tubulin alpha 1c12q13.12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
967CD63LAMP-3 | ME491 | MLA1 | OMA81H | TSPAN30CD63 molecule12q13.2DMG:Wockner_2014
PMID:cooccur
1594CYP27B1CP2B | CYP1 | CYP1alpha | CYP27B | P450c1 | PDDR | VDD1 | VDDR | VDDRI | VDRcytochrome P450 family 27 subfamily B member 112q14.1DMG:Wockner_2014
PMID:cooccur
694BTG1-B-cell translocation gene 1, anti-proliferative12q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23389MED13LMRFACD | PROSIT240 | THRAP2 | TRAP240Lmediator complex subunit 13 like12q24.21CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
4752NEK3HSPK36NIMA related kinase 313q14.13CV:PGCnp
9882TBC1D4AS160 | NIDDM5TBC1 domain family member 413q22.2CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5693PSMB5LMPX | MB1 | Xproteasome subunit beta 514q11.2CV:PGCnp
GSMA_I
112399EGLN3HIFP4H3 | HIFPH3 | PHD3egl-9 family hypoxia-inducible factor 314q13.1CV:GWASdb
CV:PGCnp
GSMA_I
7187TRAF3CAP-1 | CAP1 | CD40bp | CRAF1 | IIAE5 | LAP1TNF receptor associated factor 314q32.32CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
1396CRIP1CRHP | CRIP | CRP-1 | CRP1cysteine rich protein 114q32.33DMG:Wockner_2014
51762RAB8B-RAB8B, member RAS oncogene family15q22.2CV:PGCnpINTRACELLULAR TRAFFICKING
302ANXA2ANX2 | ANX2L4 | CAL1H | HEL-S-270 | LIP2 | LPC2 | LPC2D | P36 | PAP-IVannexin A215q22.2CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
10066SCAMP2-secretory carrier membrane protein 215q23-q25CV:PGCnp
DMG:Wockner_2014
EXOCYTOSIS
9455HOMER2ACPD | CPD | DFNA68 | HOMER-2 | VESL-2homer scaffolding protein 215q24.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
50615IL21RCD360 | NILRinterleukin 21 receptor16p11CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
23475QPRTHEL-S-90n | QPRTasequinolinate phosphoribosyltransferase16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
54820NDE1HOM-TES-87 | LIS4 | MHAC | NDE | NUDE | NUDE1nudE neurodevelopment protein 116p13.11CNV:YES
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
81831NETO2BTCL2 | NEOT2neuropilin and tolloid like 216q11CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
PMID:cooccur
Potential synaptic genes
4313MMP2CLG4 | CLG4A | MMP-2 | MMP-II | MONA | TBE-1matrix metallopeptidase 216q12.2CV:PGCnp
Network
PMID:cooccur
6367CCL22A-152E5.1 | ABCD-1 | DC/B-CK | MDC | SCYA22 | STCP-1C-C motif chemokine ligand 2216q13CV:PGCnp
PMID:cooccur
2806GOT2KAT4 | KATIV | mitAATglutamic-oxaloacetic transaminase 216q21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
1728NQO1DHQU | DIA4 | DTD | NMOR1 | NMORI | QR1NAD(P)H dehydrogenase, quinone 116q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
5176SERPINF1EPC-1 | OI12 | OI6 | PEDF | PIG35serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 117p13.3CV:PGCnp
GO_Annotation
6355CCL8HC14 | MCP-2 | MCP2 | SCYA10 | SCYA8C-C motif chemokine ligand 817q11.2CV:PGCnp
PMID:cooccur
6357CCL13CKb10 | MCP-4 | NCC-1 | NCC1 | SCYA13 | SCYL1C-C motif chemokine ligand 1317q11.2PMID:cooccur
23512SUZ12CHET9 | JJAZ1SUZ12 polycomb repressive complex 2 subunit17q11.2CV:PGCnp
DMG:Nishioka_2013
Chromatin Remodeling Genes
10493VAT1VATIvesicle amine transport 117q21CV:PGCnp
9020MAP3K14FTDCR1B | HS | HSNIK | NIKmitogen-activated protein kinase kinase kinase 1417q21CV:PGCnp
Network
9267CYTH1B2-1 | CYTOHESIN-1 | D17S811E | PSCD1 | SEC7cytohesin 117q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
4864NPC1NPCNiemann-Pick disease, type C118q11.2PMID:cooccur
374868ATP9BATPASEP | ATPIIB | HUSSY-20 | NEO1L | hMMR1ATPase phospholipid transporting 9B (putative)18q23CV:PGCnp
1528CYB5ACYB5 | MCB5cytochrome b5 type A (microsomal)18q23CV:PGCnp
DMG:Jaffe_2016
54ACP5HPAP | SPENCDI | TRAPacid phosphatase 5, tartrate resistant19p13.2CV:PGCnp
3949LDLRFH | FHC | LDLCQ2low density lipoprotein receptor19p13.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
4145MATKCHK | CTK | HHYLTK | HYL | HYLTK | Lskmegakaryocyte-associated tyrosine kinase19p13.3PMID:cooccur
10148EBI3IL-27B | IL27BEpstein-Barr virus induced 319p13.3CV:PGCnp
DMG:Wockner_2014
4616GADD45BGADD45BETA | MYD118growth arrest and DNA damage inducible beta19p13.3CV:PGCnp
PMID:cooccur
9322TRIP10CIP4 | HSTP | STOT | STP | TRIP-10thyroid hormone receptor interactor 1019p13.3DMG:Wockner_2014
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
1155TBCBCG22 | CKAP1 | CKAPItubulin folding cofactor B19q13.11-q13.12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
5817PVRCD155 | HVED | NECL5 | Necl-5 | PVS | TAGE4poliovirus receptor19q13.2CV:PGCnp
PMID:cooccur
965CD58LFA-3 | LFA3 | ag3CD58 molecule1p13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_I
GSMA_IIA
2730GCLMGLCLRglutamate-cysteine ligase modifier subunit1p22.1Association
CV:PGCnp
GO_Annotation
GR_WM
PMID:cooccur
388650FAM69A-family with sequence similarity 69 member A1p22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
1718DHCR24DCE | Nbla03646 | SELADIN1 | seladin-124-dehydrocholesterol reductase1p32.3CV:PGCnp
DMG:Montano_2016
GO_Annotation
3716JAK1JAK1A | JAK1B | JTK3Janus kinase 11p32.3-p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
11079RER1-retention in endoplasmic reticulum sorting receptor 11p36CV:PGCnp
864RUNX3AML2 | CBFA3 | PEBP2aCrunt related transcription factor 31p36CV:PGCnp
DMG:vanEijk_2014
DNM:Gulsuner_2013
6924TCEB3EloA | SIII | SIII p110 | TCEB3Atranscription elongation factor B subunit 31p36.1CV:PGCnp
DMG:Jaffe_2016
84243ZDHHC18DHHC-18 | DHHC18zinc finger DHHC-type containing 181p36.11CV:PGCnp
9064MAP3K6ASK2 | MAPKKK6 | MEKK6mitogen-activated protein kinase kinase kinase 61p36.11CV:PGCnp
DMG:Wockner_2014
55092TMEM51C1orf72transmembrane protein 511p36.21CV:GWASdb
CV:PGCnp
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
9554SEC22BERS-24 | SEC22L1SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)1q21.1CNV:YES
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5872RAB13GIG4RAB13, member RAS oncogene family1q21.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2029ENSAARPP-19eendosulfine alpha1q21.3CV:PGCnp
DEG:Zhao_2015
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
4720NDUFS2CI-49NADH:ubiquinone oxidoreductase core subunit S21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2205FCER1AFCE1A | FcERIFc fragment of IgE receptor Ia1q23CV:PGCnp
CV:PheWAS
GO_Annotation
GSMA_I
GSMA_IIA
910CD1BCD1 | CD1A | R1CD1b molecule1q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
57823SLAMF719A | CD319 | CRACC | CS1SLAM family member 71q23.1-q24.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
6504SLAMF1CD150 | CDw150 | SLAMsignaling lymphocytic activation molecule family member 11q23.3CV:GWAScat
CV:GWASdb
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
9019MPZL1MPZL1b | PZR | PZR1b | PZRa | PZRbmyelin protein zero like 11q24.2Association
CV:PGCnp
PMID:cooccur
116496FAM129AC1orf24 | GIG39 | NIBANfamily with sequence similarity 129 member A1q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9857CEP350CAP350 | GM133centrosomal protein 350kDa1q25.2CV:PGCnp
DMG:Jaffe_2016
51278IER5SBBI48immediate early response 51q25.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3586IL10CSIF | GVHDS | IL-10 | IL10A | TGIFinterleukin 101q31-q32Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
7188TRAF5MGC:39780 | RNF84TNF receptor associated factor 51q32CV:PGCnp
DMG:Wockner_2014
3290HSD11B111-DH | 11-beta-HSD1 | CORTRD2 | HDL | HSD11 | HSD11B | HSD11L | SDR26C1hydroxysteroid (11-beta) dehydrogenase 11q32-q41CV:PGCnp
Expression
PMID:cooccur
1116CHI3L1ASRT7 | CGP-39 | GP-39 | GP39 | HC-gp39 | HCGP-3P | YKL-40 | YKL40 | YYL-40 | hCGP-39chitinase 3 like 11q32.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
PMID:cooccur
55509BATF3JDP1 | JUNDM1 | SNFTbasic leucine zipper ATF-like transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
7107GPR137BTM7SF1G protein-coupled receptor 137B1q42-q43CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8564KMOdJ317G22.1kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)1q42-q44Association
CV:PGCnp
DNM:Guipponi_2014
Expression
GR_Ng
PMID:cooccur
5664PSEN2AD3L | AD4 | CMD1V | PS2 | STM2presenilin 21q42.13CV:PGCnp
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
10000AKT3MPPH | MPPH2 | PKB-GAMMA | PKBG | PRKBG | RAC-PK-gamma | RAC-gamma | STK-2v-akt murine thymoma viral oncogene homolog 31q44CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
182JAG1AGS | AHD | AWS | CD339 | HJ1 | JAGL1jagged 120p12.1-p11.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
PMID:cooccur
Ascano FMRP targets
26051PPP1R16BANKRD4 | TIMAPprotein phosphatase 1 regulatory subunit 16B20q11.23CV:GWAScat
CV:PGC128
CV:PGCnp
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
9334B4GALT5B4Gal-T5 | BETA4-GALT-IV | beta4Gal-T5 | beta4GalT-V | gt-VUDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 520q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
4318MMP9CLG4B | GELB | MANDP2 | MMP-9matrix metallopeptidase 920q13.12CV:PGCnp
PMID:cooccur
8624PSMG1C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1proteasome (prosome, macropain) assembly chaperone 121q22.3CV:PGCnp
5316PKNOX1PREP1 | pkonx1cPBX/knotted 1 homeobox 121q22.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
157ADRBK2BARK2 | GRK3adrenergic, beta, receptor kinase 222q12.1CV:PGCnp
GSMA_I
PMID:cooccur
1454CSNK1ECKIepsilon | HCKIEcasein kinase 1 epsilon22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
51318MRPL35L35mt | MRP-L35mitochondrial ribosomal protein L352p11.2CV:PGCnp
Expression
GSMA_I
2673GFPT1CMS12 | CMSTA1 | GFA | GFAT | GFAT 1 | GFAT1 | GFAT1m | GFPT | GFPT1L | MSLGglutamine--fructose-6-phosphate transaminase 12p13CV:PGCnp
GO_Annotation
Ascano FMRP targets
4190MDH1HEL-S-32 | MDH-s | MDHA | MGC:1375 | MOR2malate dehydrogenase 12p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CELL METABOLISM
CompositeSet
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
51232CRIM1CRIM-1 | S52cysteine rich transmembrane BMP regulator 1 (chordin-like)2p21CV:PGCnp
GO_Annotation
1545CYP1B1CP1B | CYPIB1 | GLC3A | P4501B1cytochrome P450 family 1 subfamily B member 12p22.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
11117EMILIN1EMI | EMILIN | gp115elastin microfibril interfacer 12p23.3-p23.2CV:PGCnp
10971YWHAQ14-3-3 | 1C5 | HS1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta2p25.1CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9448MAP4K4FLH21957 | HEL-S-31 | HGK | MEKKK4 | NIKmitogen-activated protein kinase kinase kinase kinase 42q11.2-q12CV:PGCnp
DMG:Nishioka_2013
DNM:Guipponi_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
7850IL1R2CD121b | CDw121b | IL-1R-2 | IL-1RT-2 | IL-1RT2 | IL1R2c | IL1RBinterleukin 1 receptor type 22q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
3552IL1AIL-1A | IL1 | IL1-ALPHA | IL1F1interleukin 1 alpha2q14Association
CV:GWAScat
CV:GWASdb
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
7130TNFAIP6TSG-6 | TSG6TNF alpha induced protein 62q23.3CV:PGCnp
GSMA_IIA
4065LY75CD205 | CLEC13B | DEC-205 | GP200-MR6 | LY-75lymphocyte antigen 752q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
253782CERS6CERS5 | LASS6ceramide synthase 62q24.3CV:PGCnp
GSMA_IIA
7273TTNCMD1G | CMH9 | CMPD4 | EOMFC | HMERF | LGMD2J | MYLK5 | TMDtitin2q31CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
Network
CompositeSet
79675FASTKD1-FAST kinase domains 12q31CV:PGCnp
DMG:Wockner_2014
10651MTX2-metaxin 22q31.1CV:PGCnp
GO_Annotation
G2Cdb.human_mitochondria
2744GLSAAD20 | GAC | GAM | GLS1 | KGAglutaminase2q32-q34CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
7855FZD5C2orf31 | HFZ5frizzled class receptor 52q33.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
2181ACSL3ACS3 | FACL3 | PRO2194acyl-CoA synthetase long-chain family member 32q34-q35CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
CELL METABOLISM
CompositeSet
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
6091ROBO1DUTT1 | SAX3roundabout guidance receptor 13p12CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Ascano FMRP targets
10550ARL6IP5DERP11 | GTRAP3-18 | HSPC127 | JWA | PRAF3 | Yip6b | addicsin | hp22 | jmxADP ribosylation factor like GTPase 6 interacting protein 53p14DMG:Jaffe_2016
GO_Annotation
211ALAS1ALAS | ALAS-H | ALAS3 | ALASH | MIG45'-aminolevulinate synthase 13p21.1CV:PGCnp
DNM:Fromer_2014
LK:YES
CompositeSet
Ascano FMRP targets
51161C3orf18G20chromosome 3 open reading frame 183p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
51143DYNC1LI1DNCLI1 | LIC1dynein cytoplasmic 1 light intermediate chain 13p22.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
23180RFTN1MIG2 | PIB10 | PIG9 | RAFTLINraftlin, lipid raft linker 13p24.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
Ascano FMRP targets
10402ST3GAL6SIAT10 | ST3GALVIST3 beta-galactoside alpha-2,3-sialyltransferase 63q12.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_IIA
GSMA_IIE
10342TFGHMSNP | SPG57 | TF6 | TRKT3TRK-fused gene3q12.2DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CompositeSet
56954NIT2HEL-S-8anitrilase family member 23q12.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
941CD80B7 | B7-1 | B7.1 | BB1 | CD28LG | CD28LG1 | LAB7CD80 molecule3q13.3-q21CV:PGCnp
PMID:cooccur
942CD86B7-2 | B7.2 | B70 | CD28LG2 | LAB72CD86 molecule3q21CV:PGCnp
PMID:cooccur
84561SLC12A8CCC9solute carrier family 12 member 83q21.2CV:PGCnp
11343MGLLHU-K5 | HUK5 | MAGL | MGLmonoglyceride lipase3q21.3CV:PGCnp
PMID:cooccur
CANABINOID
CELL METABOLISM
5361PLXNA1NOV | NOVP | PLEXIN-A1 | PLXN1plexin A13q21.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
483ATP1B3ATPB-3 | CD298ATPase Na+/K+ transporting subunit beta 33q23CV:PGCnp
DMG:Wockner_2014
5918RARRES1LXNL | PERG-1 | TIG1retinoic acid receptor responder (tazarotene induced) 13q25.32CV:PGCnp
DMG:Wockner_2014
56925LXNECI | TCIlatexin3q25.32DMG:vanEijk_2014
27074LAMP3CD208 | DC LAMP | DC-LAMP | DCLAMP | LAMP | LAMP-3 | TSC403lysosomal associated membrane protein 33q26.3-q27CV:GWASdb
CV:PGCnp
4026LPP-LIM domain containing preferred translocation partner in lipoma3q28CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
7037TFRCCD71 | IMD46 | T9 | TFR | TFR1 | TR | TRFR | p90transferrin receptor3q29CNV:YES
CV:PGCnp
Network
PMID:cooccur
54502RBM47NET18RNA binding motif protein 474p14CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
2926GRSF1-G-rich RNA sequence binding factor 14q13CV:PGCnp
4283CXCL9CMK | Humig | MIG | SCYB9 | crg-10C-X-C motif chemokine ligand 94q21PMID:cooccur
10983CCNICCNI1 | CYC1 | CYIcyclin I4q21.1CV:PGCnp
DMG:Wockner_2014
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
27071DAPP1BAM32dual adaptor of phosphotyrosine and 3-phosphoinositides4q25-q27CV:PGCnp
23657SLC7A11CCBR1 | xCTsolute carrier family 7 member 114q28.3CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
55751TMEM184CTMEM34transmembrane protein 184C4q31.23CV:GWASdb
CV:PGCnp
23240KIAA0922TMEM131LKIAA09224q31.3CV:GWASdb
CV:PGCnp
Ascano FMRP targets
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
6507SLC1A3EA6 | EAAT1 | GLAST | GLAST1solute carrier family 1 member 35p13CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
9765ZFYVE16PPP1R69zinc finger FYVE-type containing 165q14CV:PGCnp
DMG:Jaffe_2016
10184LHFPL2-lipoma HMGIC fusion partner-like 25q14.1CV:PGCnp
DMG:Wockner_2014
25816TNFAIP8GG2-1 | MDC-3.13 | NDED | SCC-S2 | SCCS2TNF alpha induced protein 85q23.1CV:PGCnp
DMG:Wockner_2014
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
8728ADAM19FKSG34 | MADDAM | MLTNBADAM metallopeptidase domain 195q33.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
8878SQSTM1A170 | FTDALS3 | OSIL | PDB3 | ZIP3 | p60 | p62 | p62Bsequestosome 15q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
Network
8992ATP6V0E1ATP6H | ATP6V0E | M9.2 | Vma21 | Vma21pATPase H+ transporting V0 subunit e15q35.1CV:PGCnp
GSMA_IIA
5467PPARDFAAR | NR1C2 | NUC1 | NUCI | NUCII | PPARBperoxisome proliferator activated receptor delta6p21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
PMID:cooccur
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
64771C6orf106FP852 | dJ391O22.4chromosome 6 open reading frame 1066p21.31CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
9308CD83BL11 | HB15CD83 molecule6p23CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
4199ME1HUMNDME | MESmalic enzyme 1, NADP(+)-dependent, cytosolic6q12CV:PGCnp
3066HDAC2HD2 | RPD3 | YAF1histone deacetylase 26q21DMG:Wockner_2014
Network
PMID:cooccur
Chromatin Remodeling Genes
4082MARCKS80K-L | MACS | PKCSL | PRKCSLmyristoylated alanine rich protein kinase C substrate6q22.2CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
2037EPB41L24.1-G | 4.1Gerythrocyte membrane protein band 4.1-like 26q23CV:PGCnp
Network
STRUCTURAL PLASTICITY
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
1687DFNA5ICERE-1deafness, autosomal dominant 57p15CV:PGC128
CV:PGCnp
3624INHBAEDF | FRPinhibin beta A7p15-p13CV:PGCnp
GO_Annotation
6624FSCN1FAN1 | HSN | SNL | p55fascin actin-bundling protein 17p22CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2768GNA12NNX3 | RMP | gepG protein subunit alpha 127p22.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G-PROTEIN RELAY
Ascano FMRP targets
3315HSPB1CMT2F | HEL-S-102 | HMN2B | HS.76067 | HSP27 | HSP28 | Hsp25 | SRP27heat shock protein family B (small) member 17q11.23CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
9732DOCK4-dedicator of cytokinesis 47q31.1CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10049DNAJB6DJ4 | DnaJ | HHDJ1 | HSJ-2 | HSJ2 | LGMD1D | LGMD1E | MRJ | MSJ-1DnaJ heat shock protein family (Hsp40) member B67q36.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
80223RAB11FIP1NOEL1A | RCP | rab11-FIP1RAB11 family interacting protein 1 (class I)8p11.22CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
27299ADAMDEC1M12.219ADAM-like, decysin 18p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
23362PSD3EFA6D | EFA6R | HCA67pleckstrin and Sec7 domain containing 38p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9NAT1AAC1 | MNAT | NAT-1 | NATIN-acetyltransferase 1 (arylamine N-acetyltransferase)8p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1808DPYSL2CRMP-2 | CRMP2 | DHPRP2 | DRP-2 | DRP2 | N2A3 | ULIP-2 | ULIP2dihydropyrimidinase like 28p22-p21Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
51606ATP6V1HCGI-11 | MSTP042 | NBP1 | SFD | SFDalpha | SFDbeta | VMA13ATPase H+ transporting V1 subunit H8q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8836GGHGHgamma-glutamyl hydrolase8q12.3CV:PGCnp
DMG:Jaffe_2016
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
6713SQLE-squalene epoxidase8q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
64798DEPTORDEP.6 | DEPDC6DEP domain containing MTOR-interacting protein8q24.12CV:PGCnp
DMG:Jaffe_2016
22882ZHX2AFR1 | RAFzinc fingers and homeoboxes 28q24.13CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
6482ST3GAL1Gal-NAc6S | SIAT4A | SIATFL | ST3GalA | ST3GalA.1 | ST3GalIA | ST3GalIA,1 | ST3OST3 beta-galactoside alpha-2,3-sialyltransferase 18q24.22CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10397NDRG1CAP43 | CMT4D | DRG-1 | DRG1 | GC4 | HMSNL | NDR1 | NMSL | PROXY1 | RIT42 | RTP | TARG1 | TDD5N-myc downstream regulated 18q24.3CV:PGCnp
DEG:Zhao_2015
Network
6363CCL19CKb11 | ELC | MIP-3b | MIP3B | SCYA19C-C motif chemokine ligand 199p13CV:PGCnp
304ANXA2P2ANX2L2 | ANX2P2 | LPC2Bannexin A2 pseudogene 29p13CV:PGCnp
48ACO1ACONS | HEL60 | IREB1 | IREBP | IREBP1 | IRP1aconitase 19p21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8013NR4A3CHN | CSMF | MINOR | NOR1 | TECnuclear receptor subfamily 4 group A member 39q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7185TRAF1EBI6 | MGC:10353TNF receptor associated factor 19q33-q34CV:PGCnp
PMID:cooccur
2040STOMBND7 | EPB7 | EPB72stomatin9q34.1CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
54662TBC1D13-TBC1 domain family member 139q34.11CV:PGCnp
4128MAOAMAO-Amonoamine oxidase AXp11.3Association
CV:PGCnp
GO_Annotation
GR_Ng
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
4693NDPEVR2 | FEVR | NDNorrie disease (pseudoglioma)Xp11.4CV:PGCnp
GO_Annotation
PMID:cooccur
6611SMSMRSR | SPMSY | SRS | SpSspermine synthaseXp22.1CV:PGCnp
PMID:cooccur
9367RAB9ARAB9RAB9A, member RAS oncogene familyXp22.2CV:PGCnp
1438CSF2RACD116 | CDw116 | CSF2R | CSF2RAX | CSF2RAY | CSF2RX | CSF2RY | GM-CSF-R-alpha | GMCSFR | GMR | SMDP4colony stimulating factor 2 receptor alpha subunitXp22.32 and Yp11.3Association
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
10134BCAP316C6-AG | BAP31 | CDM | DDCH | DXS1357EB-cell receptor-associated protein 31Xq28CV:GWASdb
GO_Annotation
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
Potential synaptic genes
1193CLIC2CLIC2b | MRXS32 | XAP121chloride intracellular channel 2Xq28CV:PGCnp
PMID:cooccur