SZGR2

Summary ?

GeneID	6351
Symbol	CCL4
Synonyms	ACT2\|AT744.1\|G-26\|HC21\|LAG-1\|LAG1\|MIP-1-beta\|MIP1B\|MIP1B1\|SCYA2\|SCYA4
Description	C-C motif chemokine ligand 4
Reference	MIM:182284\|HGNC:HGNC:10630\|HPRD:01657\|
Gene type	protein-coding
Map location	17q12
Pascal p-value	0.489
Fetal beta	-0.135
eGene	Myers' cis & trans

Gene in Data Sources

Gene set name	Method of gene set	Description	Info
CV:PGCnp	Genome-wide Association Study	GWAS
PMID:cooccur	High-throughput literature-search	Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included.
Literature	High-throughput literature-search	Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenias	Click to show details

Section I. Genetics and epigenetics annotation

eQTL annotation

SNP ID	Chromosome	Position	eGene	Gene Entrez ID	qvalue	eQTL type
rs10491115	chr17	33969406	CCL4	6351	0.18	cis
rs3760325	chr17	34037419	CCL4	6351	0.11	cis
rs6677917	chr1	34406841	CCL4	6351	0.2	trans
rs7545984	chr1	45003892	CCL4	6351	0.04	trans
rs7554123	chr1	45004203	CCL4	6351	0.04	trans
rs12059674	chr1	57630277	CCL4	6351	0.03	trans
rs17126801	chr1	65098162	CCL4	6351	0.15	trans
rs17474410	chr1	68267242	CCL4	6351	0	trans
rs7511937		0	CCL4	6351	0.01	trans
rs2782784	chr1	71195282	CCL4	6351	0.03	trans
rs2257700	chr1	71273516	CCL4	6351	0.1	trans
rs7541092	chr1	71362471	CCL4	6351	0.16	trans
rs17689089	chr1	77740105	CCL4	6351	0.02	trans
rs17100231	chr1	77761339	CCL4	6351	0.06	trans
rs17100274	chr1	77774412	CCL4	6351	8.691E-4	trans
rs12034005	chr1	79793034	CCL4	6351	0.09	trans
rs3015033	chr1	79847235	CCL4	6351	0.08	trans
rs17098656	chr1	80098386	CCL4	6351	0.04	trans
rs6664544	chr1	92524192	CCL4	6351	0.02	trans
rs12403481	chr1	109503655	CCL4	6351	7.529E-5	trans
rs337294		0	CCL4	6351	7.427E-4	trans
rs17029293	chr1	112567844	CCL4	6351	0	trans
rs16837984	chr1	157042626	CCL4	6351	0.04	trans
rs16837989	chr1	157046286	CCL4	6351	0.16	trans
rs16838012	chr1	157048974	CCL4	6351	0.04	trans
rs16838014		0	CCL4	6351	0.04	trans
rs6666937	chr1	170286842	CCL4	6351	0.01	trans
rs12071422	chr1	185573879	CCL4	6351	0.08	trans
rs697455	chr1	202512075	CCL4	6351	0.09	trans
rs4457633	chr1	204283819	CCL4	6351	0.13	trans
rs3748669	chr1	207077022	CCL4	6351	0.1	trans
rs6673109	chr1	207253132	CCL4	6351	0	trans
rs1796829	chr1	239661818	CCL4	6351	0	trans
rs12034521	chr1	239717679	CCL4	6351	5.379E-4	trans
snp_a-1990354		0	CCL4	6351	1.867E-5	trans
rs939217	chr2	12730751	CCL4	6351	0.11	trans
rs6432434	chr2	14160930	CCL4	6351	0.01	trans
rs6712107	chr2	14178653	CCL4	6351	0.16	trans
rs16861129	chr2	14201738	CCL4	6351	0.16	trans
rs16861131	chr2	14202085	CCL4	6351	0.16	trans
rs12329305	chr2	19552912	CCL4	6351	0.09	trans
rs12611832	chr2	31196248	CCL4	6351	0.04	trans
rs12614732	chr2	31199913	CCL4	6351	0.04	trans
rs7560081	chr2	62793238	CCL4	6351	0.02	trans
rs17029079	chr2	64736071	CCL4	6351	0.02	trans
rs17038084	chr2	85192280	CCL4	6351	4.581E-5	trans
rs17042517	chr2	113639583	CCL4	6351	0.05	trans
rs1840209	chr2	125625401	CCL4	6351	0.06	trans
rs6707117	chr2	136855504	CCL4	6351	3.09E-10	trans
rs10189091	chr2	143471999	CCL4	6351	0.01	trans
snp_a-2198363		0	CCL4	6351	0.03	trans
rs16838911	chr2	156087569	CCL4	6351	0.01	trans
rs6729167	chr2	174588057	CCL4	6351	0.02	trans
rs7608942	chr2	182820100	CCL4	6351	0.12	trans
rs16848675	chr2	213349996	CCL4	6351	0.19	trans
rs16829292	chr2	233447622	CCL4	6351	0.04	trans
rs16829401	chr2	233538391	CCL4	6351	0.01	trans
rs17040622	chr3	4440673	CCL4	6351	0.11	trans
rs17684934	chr3	4443547	CCL4	6351	0.01	trans
rs17040633	chr3	4446836	CCL4	6351	0.01	trans
rs17756483	chr3	4451309	CCL4	6351	0.01	trans
rs17685441	chr3	4465165	CCL4	6351	0.01	trans
rs17015415	chr3	24933888	CCL4	6351	0.2	trans
rs12639503	chr3	51860816	CCL4	6351	0.17	trans
rs9863778	chr3	55375950	CCL4	6351	0.04	trans
rs997245	chr3	61844600	CCL4	6351	0.01	trans
rs2875492	chr3	86006209	CCL4	6351	0.04	trans
rs16843128	chr3	100713413	CCL4	6351	0.01	trans
rs1381835	chr3	110600595	CCL4	6351	0.02	trans
rs1403709	chr3	187472811	CCL4	6351	0.01	trans
rs16839796	chr4	7188348	CCL4	6351	0	trans
rs7684087	chr4	21673380	CCL4	6351	0.03	trans
rs16989064	chr4	33639397	CCL4	6351	0.05	trans
rs11096966	chr4	38961258	CCL4	6351	0.01	trans
rs4469113	chr4	41461062	CCL4	6351	0	trans
rs2643038	chr4	62313218	CCL4	6351	0.09	trans
rs6817626	chr4	78005836	CCL4	6351	0.19	trans
rs1604153	chr4	78472744	CCL4	6351	0.13	trans
rs6827713	chr4	79936877	CCL4	6351	0.11	trans
rs17005000	chr4	81826551	CCL4	6351	0.1	trans
rs6847620	chr4	90426429	CCL4	6351	0.11	trans
rs10011751	chr4	93984994	CCL4	6351	0.06	trans
rs6881821	chr5	8578465	CCL4	6351	0	trans
rs9312843	chr5	13802997	CCL4	6351	0.08	trans
rs1697073	chr5	30907267	CCL4	6351	0.14	trans
rs2115110	chr5	38193428	CCL4	6351	4.888E-4	trans
rs16873956	chr5	44312488	CCL4	6351	0.01	trans
rs10040715	chr5	57594207	CCL4	6351	1.573E-9	trans
rs16894149	chr5	61013724	CCL4	6351	0	trans
snp_a-4217300		0	CCL4	6351	9.65E-10	trans
rs1862599	chr5	82095088	CCL4	6351	0.05	trans
rs163953	chr5	92289536	CCL4	6351	0.05	trans
rs17134275	chr5	100634998	CCL4	6351	0.04	trans
rs10063272	chr5	103540974	CCL4	6351	0.07	trans
rs2963232	chr5	103713882	CCL4	6351	0.16	trans
rs250323	chr5	115646995	CCL4	6351	0.11	trans
rs1350578	chr5	116310282	CCL4	6351	0.06	trans
rs11955842	chr5	118066618	CCL4	6351	0.17	trans
rs2141482	chr5	136760477	CCL4	6351	8.555E-4	trans
rs2189803	chr5	137684661	CCL4	6351	6.536E-7	trans
rs1549236	chr5	159688545	CCL4	6351	0.02	trans
rs9313842	chr5	159690030	CCL4	6351	0.01	trans
rs17063216	chr5	163777647	CCL4	6351	1.602E-5	trans
rs17063224	chr5	163780687	CCL4	6351	1.602E-5	trans
rs259913	chr5	169370782	CCL4	6351	6.645E-4	trans
rs2116811	chr5	171820051	CCL4	6351	0	trans
rs258875	chr5	173046554	CCL4	6351	0.05	trans
rs10484635	chr6	20538664	CCL4	6351	0.15	trans
rs195429	chr6	37354434	CCL4	6351	0.04	trans
rs12528414	chr6	38404800	CCL4	6351	0.19	trans
rs7771164	chr6	40442772	CCL4	6351	0	trans
rs9320694	chr6	119865840	CCL4	6351	0.1	trans
rs4289676	chr6	123999302	CCL4	6351	0.01	trans
rs17055235	chr6	128355263	CCL4	6351	3.355E-4	trans
rs2030024	chr6	131014624	CCL4	6351	0.03	trans
rs10485094	chr6	131071433	CCL4	6351	0.01	trans
rs17059517	chr6	131076254	CCL4	6351	0.03	trans
rs9402280	chr6	131102770	CCL4	6351	0.06	trans
rs7767456	chr6	134356119	CCL4	6351	0.06	trans
rs12176346	chr6	136732663	CCL4	6351	0.14	trans
rs2237264	chr6	136919977	CCL4	6351	0.14	trans
rs17080121	chr6	151009189	CCL4	6351	0.04	trans
rs12529269	chr6	153543829	CCL4	6351	0.01	trans
rs10872699	chr6	153544252	CCL4	6351	4.356E-4	trans
rs1321606	chr6	153545278	CCL4	6351	0.01	trans
rs10945911	chr6	164047509	CCL4	6351	4.246E-4	trans
rs17136841	chr7	16963043	CCL4	6351	0.02	trans
rs12540348	chr7	25802146	CCL4	6351	0.01	trans
rs4719825	chr7	25813917	CCL4	6351	0	trans
rs6461881	chr7	25837688	CCL4	6351	0.19	trans
rs13239699	chr7	26377619	CCL4	6351	0.13	trans
rs6462054	chr7	27886170	CCL4	6351	0.08	trans
rs17156078	chr7	27988688	CCL4	6351	0.06	trans
rs12701006	chr7	30147298	CCL4	6351	2.256E-5	trans
rs17815964	chr7	52540908	CCL4	6351	0.15	trans
rs17621151	chr7	53572911	CCL4	6351	0	trans
rs10245449	chr7	80935100	CCL4	6351	0.05	trans
rs10487383	chr7	117671737	CCL4	6351	0.03	trans
rs1562835	chr7	131832157	CCL4	6351	0.05	trans
rs6958821	chr7	153253566	CCL4	6351	0.01	trans
rs11779237	chr8	1227664	CCL4	6351	0	trans
rs1358128	chr8	5268072	CCL4	6351	0.02	trans
rs12682256	chr8	5306138	CCL4	6351	0.06	trans
rs10109456	chr8	19565941	CCL4	6351	0.18	trans
rs1457044	chr8	59257567	CCL4	6351	3.629E-5	trans
rs1457032	chr8	59290536	CCL4	6351	0	trans
rs2680903	chr8	59512333	CCL4	6351	0.11	trans
rs2634533	chr8	59535621	CCL4	6351	0.17	trans
rs7465259		0	CCL4	6351	0.02	trans
rs10104622	chr8	63333773	CCL4	6351	0.02	trans
rs2218911	chr8	63371015	CCL4	6351	0.02	trans
rs1551199	chr8	63388117	CCL4	6351	0.02	trans
rs1733950	chr8	90062516	CCL4	6351	2.459E-9	trans
rs1240028	chr8	90093357	CCL4	6351	5.654E-4	trans
rs1240087	chr8	90113945	CCL4	6351	0	trans
rs318307	chr8	90185459	CCL4	6351	4.698E-4	trans
rs1483373	chr8	90186442	CCL4	6351	0.07	trans
rs11776005	chr8	90187416	CCL4	6351	0.01	trans
rs1159499	chr8	90196948	CCL4	6351	0.03	trans
rs1355060	chr8	118717710	CCL4	6351	0.02	trans
rs2280828	chr8	118762435	CCL4	6351	0.01	trans
rs2514602	chr8	119650549	CCL4	6351	0.17	trans
rs17683401	chr8	119671834	CCL4	6351	7.051E-4	trans
rs4976941	chr8	142744439	CCL4	6351	6.721E-4	trans
rs9298651	chr9	10076275	CCL4	6351	1.655E-4	trans
rs16931013	chr9	10076859	CCL4	6351	1.655E-4	trans
rs16931018	chr9	10077048	CCL4	6351	1.655E-4	trans
rs1467547	chr9	17630726	CCL4	6351	0.17	trans
rs2210327	chr9	18109234	CCL4	6351	0.04	trans
rs6476383	chr9	32865568	CCL4	6351	0.08	trans
rs11143622	chr9	71370050	CCL4	6351	0.05	trans
rs11791891	chr9	87512411	CCL4	6351	0.02	trans
rs2165893	chr9	87531423	CCL4	6351	0.01	trans
rs10992752	chr9	96240578	CCL4	6351	0.09	trans
rs2807706	chr9	121744331	CCL4	6351	0.01	trans
rs2818297	chr9	121757015	CCL4	6351	0.09	trans
rs10739527	chr9	121772512	CCL4	6351	0.1	trans
rs6537944	chr9	137312827	CCL4	6351	0.11	trans
rs11103132	chr9	138575901	CCL4	6351	0.18	trans
rs11252514	chr10	499572	CCL4	6351	0.03	trans
rs11014370	chr10	25352798	CCL4	6351	0.05	trans
rs772394	chr10	35980024	CCL4	6351	0.06	trans
rs17432714	chr10	43526022	CCL4	6351	0.13	trans
rs2853836	chr10	48431948	CCL4	6351	0.05	trans
rs1908351	chr10	57877117	CCL4	6351	0.03	trans
rs3104871	chr10	57878502	CCL4	6351	7.468E-4	trans
rs901309	chr10	72571899	CCL4	6351	0.04	trans
rs17271314	chr10	86662514	CCL4	6351	0.02	trans
rs17094517	chr10	104021108	CCL4	6351	0.01	trans
rs485305	chr10	116048044	CCL4	6351	0	trans
rs17540632	chr10	118774194	CCL4	6351	0.2	trans
rs4750827	chr10	132547183	CCL4	6351	0.12	trans
rs4750829	chr10	132547260	CCL4	6351	0.12	trans
rs11021918	chr11	2269189	CCL4	6351	0.12	trans
rs862785	chr11	20175604	CCL4	6351	0.01	trans
rs16911034	chr11	23302320	CCL4	6351	0.05	trans
rs17142688	chr11	81319064	CCL4	6351	0.12	trans
rs11232976		0	CCL4	6351	0.12	trans
rs1789300	chr11	95463631	CCL4	6351	5.263E-5	trans
rs1727152	chr11	95467435	CCL4	6351	0	trans
rs1255149	chr11	95484493	CCL4	6351	0.01	trans
rs3748251	chr11	95519156	CCL4	6351	0.01	trans
rs16922543	chr11	95526116	CCL4	6351	0.01	trans
rs16922622	chr11	95567387	CCL4	6351	0.01	trans
rs3181323	chr11	104878386	CCL4	6351	0.04	trans
rs11219092	chr11	123130750	CCL4	6351	0.01	trans
rs7119608	chr11	134922824	CCL4	6351	0.19	trans
rs733593	chr12	6636391	CCL4	6351	0.06	trans
rs374484	chr12	27627159	CCL4	6351	0.01	trans
rs10783318	chr12	39070575	CCL4	6351	0.01	trans
rs180424	chr12	47171757	CCL4	6351	0.13	trans
rs11183673	chr12	47351412	CCL4	6351	0.02	trans
rs17097455	chr12	47398974	CCL4	6351	0.11	trans
rs17097566	chr12	47460199	CCL4	6351	0.19	trans
rs8490	chr12	51453904	CCL4	6351	1.414E-5	trans
rs1344796	chr12	76397104	CCL4	6351	0.01	trans
rs10850201	chr12	109903061	CCL4	6351	0.03	trans
rs11833075	chr12	122114592	CCL4	6351	0	trans
rs3803214	chr13	25740255	CCL4	6351	0.05	trans
rs1041050	chr13	26585121	CCL4	6351	0.13	trans
rs9581602	chr13	26834548	CCL4	6351	0.14	trans
rs17084271	chr13	27089799	CCL4	6351	0.16	trans
rs17084280	chr13	27090872	CCL4	6351	0.16	trans
rs7982110	chr13	59723428	CCL4	6351	0	trans
rs9528250	chr13	61410190	CCL4	6351	0.02	trans
rs7330331	chr13	67403122	CCL4	6351	0	trans
rs7327697	chr13	83227456	CCL4	6351	8.701E-4	trans
rs17667894	chr13	92014308	CCL4	6351	0.04	trans
rs1111763	chr14	25591536	CCL4	6351	0.11	trans
rs7156088	chr14	27821865	CCL4	6351	0.01	trans
rs7147321	chr14	45877904	CCL4	6351	0.08	trans
rs1952728	chr14	45893091	CCL4	6351	0.08	trans
rs17116137	chr14	45940865	CCL4	6351	0.08	trans
rs7151829	chr14	45971281	CCL4	6351	0.08	trans
rs4898690	chr14	51848710	CCL4	6351	0.11	trans
rs8022005	chr14	61345380	CCL4	6351	0.01	trans
rs10148418	chr14	67003872	CCL4	6351	4.771E-4	trans
rs149642	chr14	72653498	CCL4	6351	0.09	trans
rs3861624	chr14	78416193	CCL4	6351	0.17	trans
rs4905035	chr14	93489262	CCL4	6351	0	trans
rs941539	chr14	93561214	CCL4	6351	4.742E-5	trans
rs1885073	chr14	104357181	CCL4	6351	9.905E-5	trans
rs16973929	chr15	47395709	CCL4	6351	0.09	trans
rs10518936	chr15	58090522	CCL4	6351	0.19	trans
rs2414703	chr15	61904602	CCL4	6351	0.12	trans
rs289171	chr15	62576053	CCL4	6351	0	trans
rs289161	chr15	62589888	CCL4	6351	0.01	trans
rs939043	chr15	70236428	CCL4	6351	0.16	trans
rs2957037	chr15	76485535	CCL4	6351	0.12	trans
rs11858762	chr15	81386594	CCL4	6351	0.14	trans
rs9635390	chr15	90809632	CCL4	6351	8.401E-4	trans
rs7174562	chr15	93811530	CCL4	6351	0.19	trans
rs16948359	chr15	94233206	CCL4	6351	0.14	trans
rs16948375	chr15	94236354	CCL4	6351	0.02	trans
rs6500824	chr16	6820959	CCL4	6351	0.14	trans
rs8047151	chr16	17209696	CCL4	6351	9.752E-6	trans
rs4271578	chr16	17213886	CCL4	6351	1.356E-4	trans
rs7200513	chr16	17219474	CCL4	6351	0.08	trans
rs3829495	chr16	17221986	CCL4	6351	0.01	trans
rs7193763	chr16	17225534	CCL4	6351	0	trans
rs11861635	chr16	82543377	CCL4	6351	0.06	trans
rs276966	chr16	86233753	CCL4	6351	0.12	trans
rs1867231	chr17	13678834	CCL4	6351	0.03	trans
rs757075	chr17	31372017	CCL4	6351	0.06	trans
rs9903086	chr17	39949515	CCL4	6351	0.19	trans
rs7219986	chr17	53263206	CCL4	6351	0.02	trans
rs17817797	chr17	53332496	CCL4	6351	0.01	trans
rs9907100	chr17	53576709	CCL4	6351	0.09	trans
rs16951770	chr18	7444826	CCL4	6351	0.03	trans
rs7244394	chr18	32223105	CCL4	6351	0.07	trans
snp_a-4248697		0	CCL4	6351	0.14	trans
rs9950823	chr18	47526879	CCL4	6351	0.01	trans
rs16951384	chr18	47527116	CCL4	6351	0	trans
rs10502924	chr18	49172178	CCL4	6351	0.05	trans
rs8095378	chr18	49283781	CCL4	6351	0.09	trans
rs6508086	chr18	49297572	CCL4	6351	0.1	trans
rs17064695	chr18	55956427	CCL4	6351	0.09	trans
rs17074993	chr18	63260128	CCL4	6351	0.04	trans
snp_a-1821751		0	CCL4	6351	0.01	trans
rs1942461	chr18	70509159	CCL4	6351	0.07	trans
rs1942462	chr18	70509823	CCL4	6351	0.07	trans
rs1942463	chr18	70509841	CCL4	6351	0.07	trans
rs1942464	chr18	70509877	CCL4	6351	0.01	trans
rs1942466	chr18	70517154	CCL4	6351	0.07	trans
rs2156494	chr18	70518084	CCL4	6351	0.07	trans
rs17056922	chr18	73086804	CCL4	6351	0.03	trans
rs1540051	chr18	75049934	CCL4	6351	0.06	trans
rs6603096	chr19	7415722	CCL4	6351	0.13	trans
rs16980096	chr19	15000921	CCL4	6351	0.16	trans
snp_a-2138575		0	CCL4	6351	0.01	trans
rs16997215	chr20	16101890	CCL4	6351	0.12	trans
snp_a-4254460		0	CCL4	6351	0.11	trans
rs1797040	chr20	23907743	CCL4	6351	0.05	trans
rs2424603		0	CCL4	6351	0.05	trans
rs6102879	chr20	41138766	CCL4	6351	0.13	trans
rs6026122	chr20	56769083	CCL4	6351	0.01	trans
rs259991	chr20	57728347	CCL4	6351	0.14	trans
rs6015452	chr20	57782312	CCL4	6351	0.1	trans
rs4812237	chr20	59518040	CCL4	6351	0.09	trans
rs2847443	chr21	14595263	CCL4	6351	0.19	trans
rs2834872	chr21	36634845	CCL4	6351	0.03	trans
rs2834874	chr21	36641270	CCL4	6351	0.12	trans
rs2834875	chr21	36656119	CCL4	6351	0.02	trans
rs877910	chr21	36658376	CCL4	6351	0.04	trans
rs369613	chr22	22380717	CCL4	6351	0.17	trans
rs410285	chr22	22381767	CCL4	6351	0.17	trans
rs134028	chr22	28048448	CCL4	6351	2.171E-4	trans
rs5762317	chr22	28094988	CCL4	6351	0.01	trans
rs5768165	chr22	48318197	CCL4	6351	0.02	trans
rs5768168	chr22	48319334	CCL4	6351	0.02	trans
rs5768173	chr22	48321475	CCL4	6351	0.02	trans
rs12006821	chrX	50424687	CCL4	6351	0.1	trans
rs5977652	chrX	131315199	CCL4	6351	0.12	trans
rs5977655	chrX	131333069	CCL4	6351	0.07	trans
rs4824295	chrX	146496881	CCL4	6351	0.14	trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
Gene	Pearson's Correlation	Spearman's Correlation
NID1	0.81	0.57
AL137026.3	0.81	0.76
COL1A1	0.79	0.59
PCOLCE	0.78	0.51
COL6A2	0.78	0.59
COL3A1	0.78	0.54
OLFML3	0.77	0.60
COL1A2	0.77	0.70
IGF2	0.76	0.65
FN1	0.75	0.63

Top 10 negatively co-expressed genes
Gene	Pearson's Correlation	Spearman's Correlation
MT1G	-0.29	-0.17
FXYD1	-0.28	-0.15
AC098691.2	-0.27	-0.27
AF347015.33	-0.27	-0.15
S100A13	-0.27	-0.16
S100A1	-0.26	-0.09
SEPT4	-0.26	-0.17
MT-CO2	-0.26	-0.17
AF347015.21	-0.26	-0.16
C5orf53	-0.26	-0.12

Section V. Pathway annotation

Pathway name	Pathway size	# SZGR 2.0 genes in pathway	Info
KEGG CYTOKINE CYTOKINE RECEPTOR INTERACTION	267	161	All SZGR 2.0 genes in this pathway
KEGG CHEMOKINE SIGNALING PATHWAY	190	128	All SZGR 2.0 genes in this pathway
KEGG TOLL LIKE RECEPTOR SIGNALING PATHWAY	102	88	All SZGR 2.0 genes in this pathway
KEGG CYTOSOLIC DNA SENSING PATHWAY	56	44	All SZGR 2.0 genes in this pathway
BIOCARTA CCR5 PATHWAY	20	16	All SZGR 2.0 genes in this pathway
BIOCARTA NKT PATHWAY	29	21	All SZGR 2.0 genes in this pathway
PID IL12 2PATHWAY	63	54	All SZGR 2.0 genes in this pathway
REACTOME SIGNALING BY GPCR	920	449	All SZGR 2.0 genes in this pathway
REACTOME PEPTIDE LIGAND BINDING RECEPTORS	188	108	All SZGR 2.0 genes in this pathway
REACTOME CLASS A1 RHODOPSIN LIKE RECEPTORS	305	177	All SZGR 2.0 genes in this pathway
REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	57	27	All SZGR 2.0 genes in this pathway
REACTOME GPCR LIGAND BINDING	408	246	All SZGR 2.0 genes in this pathway
DAVICIONI TARGETS OF PAX FOXO1 FUSIONS DN	68	49	All SZGR 2.0 genes in this pathway
GARY CD5 TARGETS UP	473	314	All SZGR 2.0 genes in this pathway
ZHOU INFLAMMATORY RESPONSE LIVE UP	485	293	All SZGR 2.0 genes in this pathway
THUM SYSTOLIC HEART FAILURE UP	423	283	All SZGR 2.0 genes in this pathway
DEURIG T CELL PROLYMPHOCYTIC LEUKEMIA DN	320	184	All SZGR 2.0 genes in this pathway
GAL LEUKEMIC STEM CELL DN	244	153	All SZGR 2.0 genes in this pathway
OSWALD HEMATOPOIETIC STEM CELL IN COLLAGEN GEL UP	233	161	All SZGR 2.0 genes in this pathway
TAKEDA TARGETS OF NUP98 HOXA9 FUSION 6HR DN	41	29	All SZGR 2.0 genes in this pathway
TAKEDA TARGETS OF NUP98 HOXA9 FUSION 10D DN	142	90	All SZGR 2.0 genes in this pathway
ZHOU INFLAMMATORY RESPONSE FIMA UP	544	308	All SZGR 2.0 genes in this pathway
ZHOU INFLAMMATORY RESPONSE LPS UP	431	237	All SZGR 2.0 genes in this pathway
JAATINEN HEMATOPOIETIC STEM CELL DN	226	132	All SZGR 2.0 genes in this pathway
DODD NASOPHARYNGEAL CARCINOMA DN	1375	806	All SZGR 2.0 genes in this pathway
HAHTOLA SEZARY SYNDROM DN	42	26	All SZGR 2.0 genes in this pathway
HAHTOLA MYCOSIS FUNGOIDES CD4 UP	64	46	All SZGR 2.0 genes in this pathway
MARKEY RB1 ACUTE LOF UP	215	137	All SZGR 2.0 genes in this pathway
WANG ESOPHAGUS CANCER VS NORMAL UP	121	72	All SZGR 2.0 genes in this pathway
DIRMEIER LMP1 RESPONSE EARLY	66	48	All SZGR 2.0 genes in this pathway
TSAI RESPONSE TO IONIZING RADIATION	149	101	All SZGR 2.0 genes in this pathway
KAUFFMANN DNA REPLICATION GENES	147	87	All SZGR 2.0 genes in this pathway
NIKOLSKY BREAST CANCER 17Q11 Q21 AMPLICON	133	78	All SZGR 2.0 genes in this pathway
LU IL4 SIGNALING	94	56	All SZGR 2.0 genes in this pathway
BYSTRYKH HEMATOPOIESIS STEM CELL QTL TRANS	882	572	All SZGR 2.0 genes in this pathway
NAKAJIMA EOSINOPHIL	30	20	All SZGR 2.0 genes in this pathway
GALINDO IMMUNE RESPONSE TO ENTEROTOXIN	85	67	All SZGR 2.0 genes in this pathway
MATSUDA NATURAL KILLER DIFFERENTIATION	475	313	All SZGR 2.0 genes in this pathway
VERHAAK AML WITH NPM1 MUTATED UP	183	111	All SZGR 2.0 genes in this pathway
BASSO CD40 SIGNALING UP	101	76	All SZGR 2.0 genes in this pathway
GEISS RESPONSE TO DSRNA UP	38	29	All SZGR 2.0 genes in this pathway
ZHANG ANTIVIRAL RESPONSE TO RIBAVIRIN DN	51	32	All SZGR 2.0 genes in this pathway
SATO SILENCED BY METHYLATION IN PANCREATIC CANCER 1	419	273	All SZGR 2.0 genes in this pathway
WALLACE PROSTATE CANCER RACE UP	299	167	All SZGR 2.0 genes in this pathway
WORSCHECH TUMOR REJECTION UP	56	32	All SZGR 2.0 genes in this pathway
QI PLASMACYTOMA UP	259	185	All SZGR 2.0 genes in this pathway
GOLDRATH ANTIGEN RESPONSE	346	192	All SZGR 2.0 genes in this pathway
ICHIBA GRAFT VERSUS HOST DISEASE 35D UP	131	79	All SZGR 2.0 genes in this pathway
LINDSTEDT DENDRITIC CELL MATURATION A	67	52	All SZGR 2.0 genes in this pathway
YOSHIMURA MAPK8 TARGETS DN	366	257	All SZGR 2.0 genes in this pathway
CHEN METABOLIC SYNDROM NETWORK	1210	725	All SZGR 2.0 genes in this pathway
CROONQUIST STROMAL STIMULATION UP	60	42	All SZGR 2.0 genes in this pathway
CROONQUIST NRAS SIGNALING UP	41	24	All SZGR 2.0 genes in this pathway
ROME INSULIN TARGETS IN MUSCLE DN	204	114	All SZGR 2.0 genes in this pathway
POOLA INVASIVE BREAST CANCER UP	288	168	All SZGR 2.0 genes in this pathway
WORSCHECH TUMOR EVASION AND TOLEROGENICITY UP	30	19	All SZGR 2.0 genes in this pathway
LI INDUCED T TO NATURAL KILLER UP	307	182	All SZGR 2.0 genes in this pathway
ALTEMEIER RESPONSE TO LPS WITH MECHANICAL VENTILATION	128	81	All SZGR 2.0 genes in this pathway
SMIRNOV RESPONSE TO IR 6HR DN	114	69	All SZGR 2.0 genes in this pathway
NABA SECRETED FACTORS	344	197	All SZGR 2.0 genes in this pathway
NABA MATRISOME ASSOCIATED	753	411	All SZGR 2.0 genes in this pathway
NABA MATRISOME	1028	559	All SZGR 2.0 genes in this pathway

Gene Page: CCL4