Search results: The pahtway p3540 has 56 genes in the original annotation. Currently, there are 32 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
8519IFITM19-27 | CD225 | DSPA2a | IFI17 | LEU13interferon induced transmembrane protein 111p15.5DMG:Montano_2016
Expression
PMID:cooccur
6778STAT6D12S1644 | IL-4-STAT | STAT6B | STAT6Csignal transducer and activator of transcription 612q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6773STAT2IMD44 | ISGF-3 | P113 | STAT113signal transducer and activator of transcription 212q13.3CV:PGCnp
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
8600TNFSF11CD254 | ODF | OPGL | OPTB2 | RANKL | TNLG6B | TRANCE | hRANKL2 | sOdftumor necrosis factor superfamily member 1113q14CV:PGCnp
DMG:Wockner_2014
Network
6367CCL22A-152E5.1 | ABCD-1 | DC/B-CK | MDC | SCYA22 | STCP-1C-C motif chemokine ligand 2216q13CV:PGCnp
PMID:cooccur
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
6351CCL4ACT2 | AT744.1 | G-26 | HC21 | LAG-1 | LAG1 | MIP-1-beta | MIP1B | MIP1B1 | SCYA2 | SCYA4C-C motif chemokine ligand 417q12CV:PGCnp
PMID:cooccur
6352CCL5D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCPC-C motif chemokine ligand 517q12DMG:vanEijk_2014
PMID:cooccur
6356CCL11SCYA11C-C motif chemokine ligand 1117q12CV:PGCnp
PMID:cooccur
6346CCL1I-309 | P500 | SCYA1 | SISe | TCA3C-C motif chemokine ligand 117q12CV:PGCnp
PMID:cooccur
28511NKIRAS2KBRAS2 | kappaB-Ras2NFKB inhibitor interacting Ras-like 217q21.2DEG:Zhao_2015
3932LCKIMD22 | LSK | YT16 | p56lck | pp58lckLCK proto-oncogene, Src family tyrosine kinase1p34.3CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
57593EBF4COE4 | O/E-4early B-cell factor 420p13CV:GWASdb
CV:PGCnp
4600MX2MXBMX dynamin like GTPase 221q22.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3552IL1AIL-1A | IL1 | IL1-ALPHA | IL1F1interleukin 1 alpha2q14Association
CV:GWAScat
CV:GWASdb
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
3553IL1BIL-1 | IL1-BETA | IL1F2interleukin 1 beta2q14Association
Core
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
Network
PMID:cooccur
9034CCRL2ACKR5 | CKRX | CRAM | CRAM-A | CRAM-B | HCRC-C motif chemokine receptor like 23p21DMG:Wockner_2014
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
3556IL1RAPC3orf13 | IL-1RAcP | IL1R3interleukin 1 receptor accessory protein3q28CV:PGCnp
Network
PMID:cooccur
10333TLR6CD286toll like receptor 64p14CV:PGCnp
PMID:cooccur
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3702ITKEMT | LPFS1 | LYK | PSCTK2IL2 inducible T-cell kinase5q31-q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
3567IL5EDF | IL-5 | TRFinterleukin 55q31.1CV:PGCnp
GSMA_I
PMID:cooccur
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
117289TAGAPARHGAP47 | FKSG15 | IDDM21 | TAGAP1T-cell activation RhoGTPase activating protein6q25.3CV:PGCnp
DMG:Wockner_2014
4481MSR1CD204 | SCARA1 | SR-A | SRA | phSR1 | phSR2macrophage scavenger receptor 18p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
3574IL7IL-7interleukin 78q12-q13CV:GWASdb
CV:PGCnp
7099TLR4ARMD10 | CD284 | TLR-4 | TOLLtoll like receptor 49q33.1CV:PGCnp
PMID:cooccur
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur