Search results: The pahtway p1395 has 68 genes in the original annotation. Currently, there are 49 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
9806SPOCK2testican-2sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 210pter-q25.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
54541DDIT4Dig2 | REDD-1 | REDD1DNA damage inducible transcript 410q22.1CV:PGCnp
DMG:Jaffe_2016
2620GAS2-growth arrest specific 211p14.3CV:PGCnp
PMID:cooccur
4041LRP5BMND1 | EVR1 | EVR4 | HBM | LR3 | LRP-5 | LRP7 | OPPG | OPS | OPTA1 | VBCH2LDL receptor related protein 511q13.4CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
Ascano FMRP targets
23086EXPH5SLAC2-B | SLAC2Bexophilin 511q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
22822PHLDA1DT1P1B11 | PHRIP | TDAG51pleckstrin homology like domain family A member 112q15CV:GWASdb
CV:PGCnp
PMID:cooccur
115207KCTD12C13orf2 | PFET1 | PFETINpotassium channel tetramerization domain containing 1213q22.3CV:PGCnp
PMID:cooccur
EXCITABILITY
CompositeSet
7528YY1DELTA | INO80S | NF-E1 | UCRBP | YIN-YANG-1YY1 transcription factor14qCV:PGCnp
Network
PMID:cooccur
4293MAP3K9MEKK9 | MLK1 | PRKE1mitogen-activated protein kinase kinase kinase 914q24.2CV:GWAScat
CV:GWASdb
CV:PGCnp
70ACTC1ACTC | ASD5 | CMD1R | CMH11 | LVNC4actin, alpha, cardiac muscle 115q14Network
PMID:cooccur
29895MYLPFHUMMLC2B | MRLC2 | MYL11myosin light chain, phosphorylatable, fast skeletal muscle16p11.2DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Guipponi_2014
GO_Annotation
GSMA_IIE
6347CCL2GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CFC-C motif chemokine ligand 217q11.2-q12CV:PGCnp
Expression
PMID:cooccur
6351CCL4ACT2 | AT744.1 | G-26 | HC21 | LAG-1 | LAG1 | MIP-1-beta | MIP1B | MIP1B1 | SCYA2 | SCYA4C-C motif chemokine ligand 417q12CV:PGCnp
PMID:cooccur
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
23335WDR7TRAGWD repeat domain 718q21.31CV:PGCnp
CV:PheWAS
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1301COL11A1CO11A1 | COLL6 | STL2collagen type XI alpha 11p21CV:GWASdb
CV:PGCnp
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
134ADORA1RDC7adenosine A1 receptor1q32.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
Potential synaptic genes
493ATP2B4ATP2B2 | MXRA1 | PMCA4 | PMCA4b | PMCA4xATPase plasma membrane Ca2+ transporting 41q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Awadalla_2010
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5332PLCB4ARCND2 | PI-PLCphospholipase C beta 420p12CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
6431SRSF6B52 | HEL-S-91 | SFRS6 | SRP55serine/arginine-rich splicing factor 620q12-q13.1CV:PGCnp
Expression
1908EDN3ET-3 | ET3 | HSCR4 | PPET3 | WS4Bendothelin 320q13.2-q13.3CV:GWASdb
CV:PGCnp
GO_Annotation
65055REEP1C2orf23 | HMN5B | SPG31 | Yip2areceptor accessory protein 12p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
678ZFP36L2BRF2 | ERF-2 | ERF2 | RNF162C | TIS11DZFP36 ring finger protein-like 22p22.3-p21CV:PGCnp
DMG:Montano_2016
28951TRIB2C5FW | GS3955 | TRB2tribbles pseudokinase 22p24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6664SOX11MRD27SRY-box 112p25CV:PGCnp
GO_Annotation
PMID:cooccur
11138TBC1D8AD3 | GRAMD8 | HBLP1 | TBC1D8A | VRPTBC1 domain family member 82q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
4703NEBNEB177D | NEM2nebulin2q22CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
PMID:cooccur
CompositeSet
55843ARHGAP15BM046Rho GTPase activating protein 152q22.2-q22.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
7273TTNCMD1G | CMH9 | CMPD4 | EOMFC | HMERF | LGMD2J | MYLK5 | TMDtitin2q31CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
Network
CompositeSet
3708ITPR1ACV | CLA4 | INSP3R1 | IP3R | IP3R1 | PPP1R94 | SCA15 | SCA16 | SCA29inositol 1,4,5-trisphosphate receptor type 13p26.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
56987BBXARTC1 | HBP2 | HSPC339 | MDS001bobby sox homolog (Drosophila)3q13.1CV:GWASdb
CV:PGCnp
CV:PheWAS
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
79669C3orf52TTMPchromosome 3 open reading frame 523q13.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
23043TNIK-TRAF2 and NCK interacting kinase3q26.31CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
8404SPARCL1MAST 9 | MAST9 | PIG33 | SC1SPARC like 14q22.1CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
5144PDE4DACRDYS2 | DPDE3 | HSPDE4D | PDE43 | PDE4DN2 | STRK1phosphodiesterase 4D5q12CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
10769PLK2SNK | hPlk2 | hSNKpolo like kinase 25q12.1-q13.2CV:PGCnp
81848SPRY4HH17sprouty RTK signaling antagonist 45q31.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
23367LARP1LARPLa ribonucleoprotein domain family member 15q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
4082MARCKS80K-L | MACS | PKCSL | PRKCSLmyristoylated alanine rich protein kinase C substrate6q22.2CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
26002MOXD1MOX | PRO5780 | dJ248E1.1monooxygenase, DBH-like 16q23.2CV:PGCnp
DEG:Sanders_2013
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
23242COBL-cordon-bleu WH2 repeat protein7p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
54674LRRN3FIGLER5 | NLRR-3 | NLRR3leucine rich repeat neuronal 37q31.1CV:PGCnp
3757KCNH2ERG-1 | ERG1 | H-ERG | HERG | HERG1 | Kv11.1 | LQT2 | SQT1potassium voltage-gated channel subfamily H member 27q36.1ADT:Sun_2012
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
4741NEFMNEF3 | NF-M | NFMneurofilament, medium polypeptide8p21CV:GWAScat
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
5569PKIAPRKACN1protein kinase (cAMP-dependent, catalytic) inhibitor alpha8q21.12CV:PGCnp
PMID:cooccur
54704PDP1PDH | PDP | PDPC | PPM2A | PPM2Cpyruvate dehyrogenase phosphatase catalytic subunit 18q22.1CV:PGCnp
DMG:Wockner_2014