Search results: The pahtway p3993 has 204 genes in the original annotation. Currently, there are 114 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
100507334LOC100507334-two pore channel 3 pseudogene-CV:PGCnp
9776ATG13KIAA0652 | PARATARG8autophagy related 1311p11.2CV:PGCnp
2346FOLH1FGCP | FOLH | GCP2 | GCPII | NAALAD1 | NAALAdase | PSM | PSMA | mGCPfolate hydrolase (prostate-specific membrane antigen) 111p11.2CV:PGCnp
PMID:cooccur
3739KCNA4HBK4 | HK1 | HPCN2 | HUKII | KCNA4L | KCNA8 | KV1.4 | PCN2potassium voltage-gated channel subfamily A member 411p14CV:PGCnpEXCITABILITY
10522DEAF1MRD24 | NUDR | SPN | ZMYND5DEAF1, transcription factor11p15.5CV:PGCnp
DMG:Wockner_2014
8061FOSL1FRA | FRA1 | fra-1FOS like antigen 111q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9743ARHGAP32GC-GAP | GRIT | PX-RICS | RICS | p200RhoGAP | p250GAPRho GTPase activating protein 3211q24.3CV:GWASdb
CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Potential synaptic genes
89944GLB1L2MST114 | MSTP114galactosidase beta 1 like 211q25CV:PGCnp
8835SOCS2CIS2 | Cish2 | SOCS-2 | SSI-2 | SSI2 | STATI2suppressor of cytokine signaling 212qCV:PGCnp
PMID:cooccur
23017FAIM2LFG | LFG2 | NGP35 | NMP35 | TMBIM2Fas apoptotic inhibitory molecule 212q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5094PCBP2HNRNPE2 | HNRPE2 | hnRNP-E2poly(rC) binding protein 212q13.13CV:PGCnp
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6404SELPLGCD162 | CLA | PSGL-1 | PSGL1selectin P ligand12q24CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
23457ABCB9EST122234 | TAPLATP binding cassette subfamily B member 912q24CV:PGCnp
DMG:Jaffe_2016
84900RNFT2TMEM118ring finger protein, transmembrane 212q24.22CV:PGCnp
DMG:Wockner_2014
54997TESCCHP3 | TSCtescalcin12q24.22CV:PGCnp
PMID:cooccur
6249CLIP1CLIP | CLIP-170 | CLIP170 | CYLN1 | RSNCAP-Gly domain containing linker protein 112q24.3CV:PGCnp
DMG:Wockner_2014
160851DGKHDGKetadiacylglycerol kinase eta13q14.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
Ascano FMRP targets
26512INTS6DBI-1 | DDX26 | DDX26A | DICE1 | HDB | INT6 | Notchl2integrator complex subunit 613q14.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
27253PCDH17PCDH68 | PCH68protocadherin 1713q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8881CDC16ANAPC6 | APC6 | CDC16Hs | CUT9cell division cycle 1613q34CV:GWASdb
CV:PGCnp
283ANGALS9 | HEL168 | RAA1 | RNASE4 | RNASE5angiogenin, ribonuclease, RNase A family, 514q11.1-q11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
51199NINSCKL7ninein14q22.1CV:GWASdb
CV:PGCnp
CV:PheWAS
22846VASH1KIAA1036vasohibin 114q24.3CV:PGCnp
DMG:Wockner_2014
5265SERPINA1A1A | A1AT | AAT | PI | PI1 | PRO2275 | alpha1ATserpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 114q32.1CV:PGCnp
PMID:cooccur
4212MEIS2HsT18361 | MRG1Meis homeobox 215q14CV:PGCnp
PMID:cooccur
80153EDC3LSM16 | MRT50 | YJDC | YJEFN2enhancer of mRNA decapping 315q24.1CV:PGCnp
DMG:Jaffe_2016
Expression
80349WDR61REC14 | SKI8WD repeat domain 6115q25.1CV:PGCnp
DMG:Nishioka_2013
Network
55784MCTP2-multiple C2 domains, transmembrane 215q26.2CV:GWASdb
CV:PGCnp
PMID:cooccur
5046PCSK6PACE4 | SPC4proprotein convertase subtilisin/kexin type 615q26.3CV:PGCnp
GO_Annotation
PMID:cooccur
1387CREBBPCBP | KAT3A | RSTSCREB binding protein16p13.3CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
55238SLC38A7SNAT7solute carrier family 38 member 716q21CV:GWAScat
CV:PGC128
CV:PGCnp
79786KLHL36C16orf44kelch like family member 3616q24.1CV:PGCnp
DMG:Wockner_2014
10750GRAP-GRB2-related adaptor protein17p11.2CV:PGCnp
239ALOX1212-LOX | 12S-LOX | LOG12arachidonate 12-lipoxygenase17p13.1DMG:vanEijk_2014
PMID:cooccur
55275VPS53HCCS1 | PCH2E | hVps53L | pp13624VPS53, GARP complex subunit17p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
124997WDR81CAMRQ2 | PPP1R166 | SORF-2WD repeat domain 8117p13.3CV:PGCnp
DMG:Jaffe_2016
4763NF1NFNS | VRNF | WSSneurofibromin 117q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6351CCL4ACT2 | AT744.1 | G-26 | HC21 | LAG-1 | LAG1 | MIP-1-beta | MIP1B | MIP1B1 | SCYA2 | SCYA4C-C motif chemokine ligand 417q12CV:PGCnp
PMID:cooccur
11072DUSP14MKP-L | MKP6dual specificity phosphatase 1417q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1267CNPCNP12',3'-cyclic nucleotide 3' phosphodiesterase17q21Association
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
124790HEXIM2L3hexamethylene bis-acetamide inducible 217q21.31CV:PGCnp
DMG:Wockner_2014
1636ACEACE1 | CD143 | DCP | DCP1 | ICH | MVCD3angiotensin I converting enzyme17q23.3CV:PGCnp
Network
PMID:cooccur
23136EPB41L34.1B | DAL-1 | DAL1erythrocyte membrane protein band 4.1-like 318p11.32CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
494470RNF165ARKL2 | RNF111L2ring finger protein 16518q21.1CV:PGCnp
DMG:Wockner_2014
58525WIZZNF803widely interspaced zinc finger motifs19p13.1DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
10347ABCA7ABCA-SSN | ABCXATP binding cassette subfamily A member 719p13.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
57711ZNF529-zinc finger protein 52919q13.13CV:PGCnp
DMG:Wockner_2014
8915BCL10CARMEN | CIPER | CLAP | IMD37 | c-E10 | mE10B-cell CLL/lymphoma 101p22CV:PGCnp
GO_Annotation
676BRDTBRD6 | CT9bromodomain testis associated1p22.1CV:PGCnp
PMID:cooccur
23154NCDN-neurochondrin1p34.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10136CELA3AELA3 | ELA3Achymotrypsin like elastase family member 3A1p36.12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
57449PLEKHG5CMTRIC | DSMA4 | GEF720 | Syx | Techpleckstrin homology and RhoGEF domain containing G51p36.31CV:PGCnp
DMG:Jaffe_2016
4209MEF2D-myocyte enhancer factor 2D1q12-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
11311VPS45H1 | H1VPS45 | SCN5 | VPS45A | VPS45B | VPS54A | VSP45 | VSP45Avacuolar protein sorting 45 homolog (S. cerevisiae)1q21.2CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
57459GATAD2BMRD18 | P66beta | p68GATA zinc finger domain containing 2B1q21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
2494NR5A2B1F | B1F2 | CPF | FTF | FTZ-F1 | FTZ-F1beta | LRH-1 | LRH1 | hB1F-2nuclear receptor subfamily 5 group A member 21q32.1CV:PGCnp
DMG:Jaffe_2016
22919MAPRE1EB1microtubule associated protein RP/EB family member 120q11.1-q11.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
140685ZBTB46BTBD4 | BZEL | RINZF | ZNF340 | dJ583P15.7 | dJ583P15.8zinc finger and BTB domain containing 4620q13.33CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
54069MIS18AB28 | C21orf45 | C21orf46 | FASP1 | MIS18alpha | hMis18alphaMIS18 kinetochore protein A21q22.11CV:PGCnp
DMG:Jaffe_2016
7113TMPRSS2PP9284 | PRSS10transmembrane protease, serine 221q22.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1413CRYBA4CTRCT23 | MCOPCT4crystallin beta A422q12.1CV:PGCnp
GSMA_I
157ADRBK2BARK2 | GRK3adrenergic, beta, receptor kinase 222q12.1CV:PGCnp
GSMA_I
PMID:cooccur
10766TOB2TOB4 | TOBL | TROB2transducer of ERBB2, 222q13.2CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
7840ALMS1ALSSALMS1, centrosome and basal body associated protein2p13CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
Ascano FMRP targets
4084MXD1BHLHC58 | MAD | MAD1MAX dimerization protein 12p13-p12CV:PGCnp
PMID:cooccur
57217TTC7AGIDID | MINAT | TTC7tetratricopeptide repeat domain 7A2p21CV:PGCnp
DMG:Jaffe_2016
5610EIF2AK2EIF2AK1 | PKR | PPP1R83 | PRKReukaryotic translation initiation factor 2 alpha kinase 22p22-p21CV:PGCnp
PMID:cooccur
6382SDC1CD138 | SDC | SYND1 | syndecansyndecan 12p24.1CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
84910TMEM87B-transmembrane protein 87B2q13CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
CompositeSet
150468CKAP2L-cytoskeleton associated protein 2 like2q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
29842TFCP2L1CRTR1 | LBP-9 | LBP9transcription factor CP2-like 12q14CV:PGCnp
DNM:McCarthy_2014
Expression
GSMA_I
GSMA_IIA
55660PRPF40AFBP-11 | FBP11 | FLAF1 | FNBP3 | HIP-10 | HIP10 | HYPA | NY-REN-6 | Prp40pre-mRNA processing factor 40 homolog A2q23.3CV:PGCnp
Expression
GSMA_IIA
Network
Ascano FMRP targets
1493CTLA4ALPS5 | CD | CD152 | CELIAC3 | CTLA-4 | GRD4 | GSE | IDDM12cytotoxic T-lymphocyte associated protein 42q33Association
CV:PGCnp
PMID:cooccur
25791NGEFARHGEF27 | EPHEXINneuronal guanine nucleotide exchange factor2q37CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
GO_Annotation
LK:YES
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
79781IQCA14930465P12Rik | DRC11 | IQCAIQ motif containing with AAA domain 12q37.3CV:PGCnp
131177FAM3DEF7 | OIT1family with sequence similarity 3 member D3p14.2CV:PGCnp
DNM:Xu_2012
CompositeSet
54899PXKMONaKAPX domain containing serine/threonine kinase like3p14.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
10168ZNF197D3S1363E | P18 | VHLaK | ZKSCAN9 | ZNF166 | ZNF20 | ZSCAN41zinc finger protein 1973p21CV:PGCnp
200894ARL13BARL2L1 | JBTS8ADP ribosylation factor like GTPase 13B3q11.1CV:PGCnp
GSMA_IIA
GSMA_IIE
8997KALRNARHGEF24 | CHD5 | CHDS5 | DUET | DUO | HAPIP | TRADkalirin, RhoGEF kinase3q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5918RARRES1LXNL | PERG-1 | TIG1retinoic acid receptor responder (tazarotene induced) 13q25.32CV:PGCnp
DMG:Wockner_2014
3556IL1RAPC3orf13 | IL-1RAcP | IL1R3interleukin 1 receptor accessory protein3q28CV:PGCnp
Network
PMID:cooccur
91050CCDC149-coiled-coil domain containing 1494p15.2CV:PGCnp
23231SEL1L3Sel-1L3SEL1L family member 34p15.2CV:PGCnp
CV:PheWAS
85460ZNF518B-zinc finger protein 518B4p16.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
3954LETM1-leucine zipper and EF-hand containing transmembrane protein 14p16.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
Ascano FMRP targets
10144FAM13AARHGAP48 | FAM13A1family with sequence similarity 13 member A4q22.1CV:GWAScat
CV:PGCnp
CV:PheWAS
Ascano FMRP targets
153657TTC23LMC25-1tetratricopeptide repeat domain 23 like5p13.2CV:PGCnp
DMG:Jaffe_2016
65983GRAMD3NS3TP2GRAM domain containing 35q23.2CV:PGCnp
GSMA_I
171019ADAMTS19-ADAM metallopeptidase with thrombospondin type 1 motif 195q23.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
23092ARHGAP26GRAF | GRAF1 | OPHN1L | OPHN1L1Rho GTPase activating protein 265q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
51307FAM53CC5orf6family with sequence similarity 53 member C5q31CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
79685SAP30LNS4ATP2SAP30-like5q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1212CLTBLCBclathrin light chain B5q35CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
92181UBTD2DCUBPubiquitin domain containing 25q35.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
89870TRIM15RNF93 | ZNF178 | ZNFB7tripartite motif containing 156p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
177AGERRAGEadvanced glycosylation end product-specific receptor6p21.3CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
23033DOPEY1DOP1 | KIAA1117 | dJ202D23.2dopey family member 16q15CV:PGCnpCompositeSet
Darnell FMRP targets
643749TRAF3IP2-AS1C6UAS | C6orf3 | NCRNA00248 | TRAF3IP2-AS2TRAF3IP2 antisense RNA 16q21CV:PGCnp
2309FOXO3AF6q21 | FKHRL1 | FKHRL1P2 | FOXO2 | FOXO3Aforkhead box O36q21CV:PGCnp
DMG:Wockner_2014
Network
CompositeSet
Darnell FMRP targets
26575RGS17RGS-17 | RGSZ2 | hRGS17regulator of G-protein signaling 176q25.3CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
64224HERPUD2-HERPUD family member 27p14.2CV:PGCnp
1357CPA1CPAcarboxypeptidase A17q32CV:PGCnp
Expression
1669DEFA4DEF4 | HNP-4 | HP-4 | HP4defensin alpha 48p23CV:PGCnp
PMID:cooccur
4986OPRK1K-OR-1 | KOR | KOR-1 | OPRKopioid receptor, kappa 18q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
9760TOXTOX1thymocyte selection associated high mobility group box8q12.1CV:GWASdb
CV:PGCnp
PMID:cooccur
81796SLCO5A1OATP-J | OATP-RP4 | OATP5A1 | OATPJ | OATPRP4 | SLC21A15solute carrier organic anion transporter family member 5A18q13.3CV:GWASdb
CV:PGCnp
27067STAU239K2 | 39K3staufen double-stranded RNA binding protein 28q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
84232MAF1-MAF1 homolog, negative regulator of RNA polymerase III8q24.3DMG:Jaffe_2016
158381ATP8B5PFetAATPase phospholipid transporting 8B5, pseudogene9p13.3CV:PGCnp
4920ROR2BDB | BDB1 | NTRKR2receptor tyrosine kinase-like orphan receptor 29q22CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
5253PHF2CENP-35 | GRC5 | JHDM1EPHD finger protein 29q22.31CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
158401C9orf84-chromosome 9 open reading frame 849q31.3CV:PGCnp
10044SH2D3CCHAT | NSP3 | PRO34088 | SHEP1SH2 domain containing 3C9q34.11CV:PGCnp
DMG:vanEijk_2014