Gene Page: FOXRED2
Summary ?
| GeneID | 80020 |
| Symbol | FOXRED2 |
| Synonyms | ERFAD |
| Description | FAD dependent oxidoreductase domain containing 2 |
| Reference | MIM:613777|HGNC:HGNC:26264|Ensembl:ENSG00000100350|HPRD:08666|Vega:OTTHUMG00000044614 |
| Gene type | protein-coding |
| Map location | 22q12.3 |
| Pascal p-value | 0.167 |
| eGene | Anterior cingulate cortex BA24 Myers' cis & trans Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:GWASdb | Genome-wide Association Studies | GWASdb records for schizophrenia | |
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs5995385 | chr22 | 37519863 | FOXRED2 | 80020 | 0.15 | cis | ||
| rs370237595 | 22 | 36798608 | FOXRED2 | ENSG00000100350.10 | 7.68591E-7 | 0.01 | 104540 | gtex_brain_ba24 |
| rs372958663 | 22 | 36802825 | FOXRED2 | ENSG00000100350.10 | 4.64988E-7 | 0.01 | 100323 | gtex_brain_ba24 |
| rs138018565 | 22 | 36814508 | FOXRED2 | ENSG00000100350.10 | 1.81272E-7 | 0.01 | 88640 | gtex_brain_ba24 |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| KINSEY TARGETS OF EWSR1 FLII FUSION UP | 1278 | 748 | All SZGR 2.0 genes in this pathway |
| DODD NASOPHARYNGEAL CARCINOMA DN | 1375 | 806 | All SZGR 2.0 genes in this pathway |
| GAUSSMANN MLL AF4 FUSION TARGETS E UP | 97 | 60 | All SZGR 2.0 genes in this pathway |
| KRIGE RESPONSE TO TOSEDOSTAT 6HR DN | 911 | 527 | All SZGR 2.0 genes in this pathway |
| KRIGE RESPONSE TO TOSEDOSTAT 24HR DN | 1011 | 592 | All SZGR 2.0 genes in this pathway |
| DURAND STROMA NS UP | 162 | 103 | All SZGR 2.0 genes in this pathway |