Search results: The pahtway p3589 has 476 genes in the original annotation. Currently, there are 285 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6935ZEB1AREB6 | BZP | DELTAEF1 | FECD6 | NIL2A | PPCD3 | TCF8 | ZFHEP | ZFHX1Azinc finger E-box binding homeobox 110p11.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
10659CELF2BRUNOL3 | CUGBP2 | ETR-3 | ETR3 | NAPORCUGBP, Elav-like family member 210p13CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
6251RSU1RSP-1Ras suppressor protein 110p13CV:PGCnp
DMG:Wockner_2014
5588PRKCQPRKCT | nPKC-thetaprotein kinase C theta10p15CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Ascano FMRP targets
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
5551PRF1FLH2 | HPLH2 | P1 | PFN1 | PFPperforin 110q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
59ACTA2AAT6 | ACTSA | MYMY5actin, alpha 2, smooth muscle, aorta10q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
10580SORBS1CAP | FLAF2 | R85FL | SH3D5 | SH3P12 | SORB1sorbin and SH3 domain containing 110q23.33CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3087HHEXHEX | HMPH | HOX11L-PEN | PRH | PRHXhematopoietically expressed homeobox10q23.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
1308COL17A1BA16H23.2 | BP180 | BPA-2 | BPAG2 | ERED | LAD-1collagen type XVII alpha 110q24.3CV:GWASdb
CV:PGCnp
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1408CRY2HCRY2 | PHLL2cryptochrome circadian clock 211p11.2CV:PGCnp
PMID:cooccur
387751GVINP1GVIN1 | GVIN1P | VLIG-1 | VLIG1GTPase, very large interferon inducible pseudogene 111p15.4CV:PGCnp
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
187APLNRAGTRL1 | APJ | APJR | HG11apelin receptor11q12CV:PGCnp
64231MS4A6A4SPAN3 | 4SPAN3.2 | CD20L3 | CDA01 | MS4A6 | MST090 | MSTP090membrane spanning 4-domains A6A11q12.1CV:PGCnp
DMG:vanEijk_2014
710SERPING1C1IN | C1INH | C1NH | HAE1 | HAE2serpin peptidase inhibitor, clade G (C1 inhibitor), member 111q12.1CV:PGCnp
Expression
9379NRXN2-neurexin 211q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Darnell FMRP targets
923CD6TP120CD6 molecule11q13CV:PGCnp
DMG:vanEijk_2014
1521CTSWLYPNcathepsin W11q13.1CV:PGCnp
DMG:vanEijk_2014
5138PDE2ACGS-PDE | PDE2A1 | PED2A4 | cGSPDEphosphodiesterase 2A11q13.4CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2350FOLR2BETA-HFR | FBP | FBP/PL-1 | FR-BETA | FR-P3folate receptor 2 (fetal)11q13.4CV:PGCnp
DMG:vanEijk_2014
330BIRC3AIP1 | API2 | CIAP2 | HAIP1 | HIAP1 | MALT2 | MIHC | RNF49 | c-IAP2baculoviral IAP repeat containing 311q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
834CASP1ICE | IL1BC | P45caspase 111q23DEG:Sanders_2013
GSMA_I
Network
915CD3DCD3-DELTA | IMD19 | T3DCD3d molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
917CD3GCD3-GAMMA | IMD17 | T3GCD3g molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
643CXCR5BLR1 | CD185 | MDR15C-X-C motif chemokine receptor 511q23.3CV:PGCnp
DMG:vanEijk_2014
64221ROBO3HGPPS | HGPS | RBIG1 | RIG1roundabout guidance receptor 311q24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6843VAMP1SPAX1 | SYB1 | VAMP-1vesicle associated membrane protein 112pCV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
EXOCYTOSIS
SEROTONIN
Potential synaptic genes
4033LRMPJAW1lymphoid restricted membrane protein12p12.1CV:PGCnp
939CD27S152 | S152. LPFS2 | T14 | TNFRSF7 | Tp55CD27 molecule12p13DEG:Sanders_2013
DMG:vanEijk_2014
PMID:cooccur
969CD69AIM | BL-AC/P26 | CLEC2C | EA1 | GP32/28 | MLR-3CD69 molecule12p13CV:GWASdb
CV:PGCnp
PMID:cooccur
715C1R-complement C1r subcomponent12p13CV:PGCnp
GO_Annotation
9976CLEC2BAICL | CLECSF2 | HP10085 | IFNRG1C-type lectin domain family 2 member B12p13-p12CV:PGCnp
DMG:Nishioka_2013
920CD4CD4mutCD4 molecule12p13.31Association
CV:PGCnp
GO_Annotation
PMID:cooccur
9194SLC16A7MCT2solute carrier family 16 member 712q13CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5463POU6F1BRN5 | MPOU | TCFB1POU class 6 homeobox 112q13.13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
94ACVRL1ACVRLK1 | ALK-1 | ALK1 | HHT | HHT2 | ORW2 | SKR3 | TSR-Iactivin A receptor like type 112q13.13CV:PGCnp
DMG:Wockner_2014
3695ITGB7-integrin subunit beta 712q13.13CV:PGCnp
DMG:vanEijk_2014
Network
1634DCNCSCD | DSPG2 | PG40 | PGII | PGS2 | SLRR1Bdecorin12q21.33CV:PGCnp
Network
3479IGF1IGF-I | IGFI | MGFinsulin like growth factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
9815GIT2CAT-2 | CAT2 | PKLGIT ArfGAP 212q24.1CV:PGCnp
DMG:Jaffe_2016
32ACACBACC2 | ACCB | HACC275acetyl-CoA carboxylase beta12q24.11CV:PGCnp
DMG:Wockner_2014
54997TESCCHP3 | TSCtescalcin12q24.22CV:PGCnp
PMID:cooccur
55206SBNO1MOP3 | Snostrawberry notch homolog 1 (Drosophila)12q24.31CV:PGCnp
DNM:Girard_2011
LK:YES
PMID:cooccur
CompositeSet
10186LHFP-lipoma HMGIC fusion partner13q12CV:PGCnp
DMG:Nishioka_2013
26586CKAP2LB1 | TMAP | se20-10cytoskeleton associated protein 213q14CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
9617MTRF1MRF1 | MTTRF1 | RF1mitochondrial translational release factor 113q14.1-q14.3CV:PGCnp
PMID:cooccur
115207KCTD12C13orf2 | PFET1 | PFETINpotassium channel tetramerization domain containing 1213q22.3CV:PGCnp
PMID:cooccur
EXCITABILITY
CompositeSet
10253SPRY2IGAN3 | hSPRY2sprouty RTK signaling antagonist 213q31.1CV:PGCnp
PMID:cooccur
2159F10FX | FXAcoagulation factor X13q34CV:PGCnp
GO_Annotation
Network
PMID:cooccur
7011TEP1TLP1 | TP1 | TROVE1 | VAULT2 | p240telomerase associated protein 114q11.2CV:PGCnp
DNM:Xu_2012
GSMA_I
CompositeSet
Chromatin Remodeling Genes
57161PELI2-pellino E3 ubiquitin protein ligase family member 214q21CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
22846VASH1KIAA1036vasohibin 114q24.3CV:PGCnp
DMG:Wockner_2014
1112FOXN3C14orf116 | CHES1 | PRO1635forkhead box N314q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
64919BCL11BATL1 | ATL1-alpha | ATL1-beta | ATL1-delta | ATL1-gamma | CTIP-2 | CTIP2 | RIT1 | ZNF856B | hRIT1-alphaB-cell CLL/lymphoma 11B14q32.2CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
254531LPCAT4AGPAT7 | AYTL3 | LPAAT-eta | LPEAT2lysophosphatidylcholine acyltransferase 415q14CV:PGCnp
DMG:vanEijk_2014
5330PLCB2PLC-beta-2phospholipase C beta 215q15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
6642SNX1HsT17379 | VPS5sorting nexin 115q22.31CV:PGCnp
28232SLCO3A1OATP-D | OATP3A1 | OATPD | SLC21A11solute carrier organic anion transporter family member 3A115q26CV:GWAScat
CV:PGCnp
PMID:cooccur
23336SYNMDMN | SYNsynemin15q26.3CV:PGCnp
DMG:Jaffe_2016
50615IL21RCD360 | NILRinterleukin 21 receptor16p11CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
5579PRKCBPKC-beta | PKCB | PRKCB1 | PRKCB2protein kinase C beta16p11.2CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
3683ITGALCD11A | LFA-1 | LFA1Aintegrin subunit alpha L16p11.2CV:PGCnp
GO_Annotation
GSMA_IIE
930CD19B4 | CVID3CD19 molecule16p11.2GSMA_IIE
PMID:cooccur
4261CIITAC2TA | CIITAIV | MHC2TA | NLRAclass II, major histocompatibility complex, transactivator16p13CV:PGCnp
608TNFRSF17BCM | BCMA | CD269 | TNFRSF13Atumor necrosis factor receptor superfamily member 1716p13.1CV:PGCnp
4629MYH11AAT4 | FAA4 | SMHC | SMMHCmyosin, heavy chain 11, smooth muscle16p13.11CNV:YES
CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
1540CYLDBRSS | CDMT | CYLD1 | CYLDI | EAC | MFT | MFT1 | SBS | TEM | USPL2CYLD lysine 63 deubiquitinase16q12.1CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
6483ST3GAL2Gal-NAc6S | SIAT4B | ST3GALII | ST3GalA.2ST3 beta-galactoside alpha-2,3-sialyltransferase 216q22.1CV:PGCnp
DMG:Wockner_2014
55794DDX28MDDX28DEAD-box helicase 2816q22.1CV:PGCnp
6560SLC12A4CTC-479C5.17 | KCC1 | hKCC1solute carrier family 12 member 416q22.1CV:PGCnp
DMG:Wockner_2014
3394IRF8H-ICSBP | ICSBP | ICSBP1 | IMD32A | IMD32B | IRF-8interferon regulatory factor 816q24.1CV:PGCnp
4239MFAP4-microfibrillar associated protein 417p11.2CV:PGCnp
GO_Annotation
22861NLRP1CARD7 | CIDED | CLR17.1 | DEFCAP | DEFCAP-L/S | NAC | NALP1 | PP1044 | SLEV1 | VAMAS1NLR family, pyrin domain containing 117p13.2CV:PGCnp
DEG:Sanders_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
8447DOC2BDOC2BLdouble C2-like domains, beta17p13.3CV:PGCnp
GO_Annotation
EXOCYTOSIS
6347CCL2GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CFC-C motif chemokine ligand 217q11.2-q12CV:PGCnp
Expression
PMID:cooccur
6352CCL5D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCPC-C motif chemokine ligand 517q12DMG:vanEijk_2014
PMID:cooccur
924CD7GP40 | LEU-9 | TP41 | Tp40CD7 molecule17q25.2-q25.3DMG:vanEijk_2014
PMID:cooccur
10982MAPRE2CSCSC2 | EB1 | EB2 | RP1microtubule associated protein RP/EB family member 218q12.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
4155MBP-myelin basic protein18q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
51291GMIPARHGAP46GEM interacting protein19p13.11CV:PGCnp
LK:YES
1264CNN1HEL-S-14 | SMCC | Sm-Calpcalponin 119p13.2CV:PGCnp
DMG:Wockner_2014
Network
4066LYL1bHLHa18lymphoblastic leukemia associated hematopoiesis regulator 119p13.2CV:PGCnp
4145MATKCHK | CTK | HHYLTK | HYL | HYLTK | Lskmegakaryocyte-associated tyrosine kinase19p13.3PMID:cooccur
23526HMHA1ARHGAP45 | HA-1 | HLA-HA1histocompatibility (minor) HA-119p13.3CV:PGCnp
DEG:Zhao_2015
718C3AHUS5 | ARMD9 | ASP | C3a | C3b | CPAMD1 | HEL-S-62pcomplement component 319p13.3-p13.2Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
933CD22SIGLEC-2 | SIGLEC2CD22 molecule19q13.1CV:PGCnp
DMG:Wockner_2014
Network
11184MAP4K1HPK1mitogen-activated protein kinase kinase kinase kinase 119q13.1-q13.4CV:PGCnp
973CD79AIGA | MB-1CD79a molecule19q13.2DMG:vanEijk_2014
GO_Annotation
2323FLT3LGFL | FLT3Lfms related tyrosine kinase 3 ligand19q13.3CV:PGCnp
DMG:vanEijk_2014
6689SPIBSPI-BSpi-B transcription factor19q13.33CV:PGCnp
DNM:Xu_2012
CompositeSet
4818NKG7GIG1 | GMP-17 | p15-TIA-1natural killer cell granule protein 719q13.41DMG:vanEijk_2014
914CD2LFA-2 | SRBC | T11CD2 molecule1p13.1CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
3752KCND3BRGDA9 | KCND3L | KCND3S | KSHIVB | KV4.3 | SCA19 | SCA22potassium voltage-gated channel subfamily D member 31p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
3953LEPRCD295 | LEP-R | LEPRD | OB-R | OBRleptin receptor1p31CV:PGCnp
GSMA_IIA
PMID:cooccur
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
7075TIE1JTK14 | TIEtyrosine kinase with immunoglobulin like and EGF like domains 11p34-p33CV:PGCnp
GO_Annotation
3932LCKIMD22 | LSK | YT16 | p56lck | pp58lckLCK proto-oncogene, Src family tyrosine kinase1p34.3CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
2701GJA4CX37gap junction protein alpha 41p35.1CV:GWAScat
CV:GWASdb
CV:PGCnp
864RUNX3AML2 | CBFA3 | PEBP2aCrunt related transcription factor 31p36CV:PGCnp
DMG:vanEijk_2014
DNM:Gulsuner_2013
3399ID3HEIR-1 | bHLHb25inhibitor of DNA binding 3, HLH protein1p36.13-p36.12CV:PGCnp
PMID:cooccur
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8718TNFRSF25APO-3 | DDR3 | DR3 | LARD | TNFRSF12 | TR3 | TRAMP | WSL-1 | WSL-LRtumor necrosis factor receptor superfamily member 251p36.2CV:PGCnp
Expression
1805DPTTRAMPdermatopontin1q12-q23CV:PGCnp
PMID:cooccur
3570IL6RCD126 | IL-6R-1 | IL-6RA | IL6Q | IL6RA | IL6RQ | gp80interleukin 6 receptor1q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
4881NPR1ANPRA | ANPa | GUC2A | GUCY2A | NPRAnatriuretic peptide receptor 11q21-q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
51177PLEKHO1CKIP-1 | CKIP1 | JBP | OC120pleckstrin homology domain containing O11q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
GSMA_IIA
1141CHRNB2EFNL3 | nAChRB2cholinergic receptor nicotinic beta 2 subunit1q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
LIGAND GATED ION SIGNALING
962CD48BCM1 | BLAST | BLAST1 | MEM-102 | SLAMF2 | hCD48 | mCD48CD48 molecule1q21.3-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
2205FCER1AFCE1A | FcERIFc fragment of IgE receptor Ia1q23CV:PGCnp
CV:PheWAS
GO_Annotation
GSMA_I
GSMA_IIA
8490RGS5MST092 | MST106 | MST129 | MSTP032 | MSTP092 | MSTP106 | MSTP129regulator of G-protein signaling 51q23.1CV:PGCnp
GSMA_IIA
Network
PMID:cooccur
51744CD2442B4 | NAIL | NKR2B4 | Nmrk | SLAMF4CD244 molecule1q23.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
4063LY9CD229 | SLAMF3 | hly9 | mLY9lymphocyte antigen 91q23.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
919CD247CD3-ZETA | CD3H | CD3Q | CD3Z | IMD25 | T3Z | TCRZCD247 molecule1q24.2CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
3075CFHAHUS1 | AMBP1 | ARMD4 | ARMS1 | CFHL3 | FH | FHL1 | HF | HF1 | HF2 | HUScomplement factor H1q32CV:GWASdb
CV:PGCnp
1116CHI3L1ASRT7 | CGP-39 | GP-39 | GP39 | HC-gp39 | HCGP-3P | YKL-40 | YKL40 | YYL-40 | hCGP-39chitinase 3 like 11q32.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
PMID:cooccur
114548NLRP3AGTAVPRL | AII | AVP | C1orf7 | CIAS1 | CLR1.1 | FCAS | FCAS1 | FCU | MWS | NALP3 | PYPAF1NLR family, pyrin domain containing 31q44CV:PGCnp
PMID:cooccur
7056THBDAHUS6 | BDCA3 | CD141 | THPH12 | THRM | TMthrombomodulin20p11.2CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
26051PPP1R16BANKRD4 | TIMAPprotein phosphatase 1 regulatory subunit 16B20q11.23CV:GWAScat
CV:PGC128
CV:PGCnp
958CD40Bp50 | CDW40 | TNFRSF5 | p50CD40 molecule20q12-q13.2CV:GWASdb
CV:PGCnp
PMID:cooccur
1908EDN3ET-3 | ET3 | HSCR4 | PPET3 | WS4Bendothelin 320q13.2-q13.3CV:GWASdb
CV:PGCnp
GO_Annotation
54923LIME1LIME | dJ583P15.4Lck interacting transmembrane adaptor 120q13.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
81030ZBP1C20orf183 | DAI | DLM-1 | DLM1Z-DNA binding protein 120q13.31CV:PGCnp
DEG:Sanders_2013
Expression
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
6285S100BNEF | S100 | S100-B | S100betaS100 calcium binding protein B21q22.3Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
7122CLDN5AWAL | BEC1 | CPETRL1 | TMVCFclaudin 522q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
5880RAC2EN-7 | Gx | HSPC022 | p21-Rac2ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)22q13.1CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
4248MGAT3GNT-III | GNT3mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase22q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4689NCF4NCF | P40PHOX | SH3PXD4neutrophil cytosolic factor 422q13.1CV:PGCnp
925CD8ACD8 | Leu2 | MAL | p32CD8a molecule2p12CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
GSMA_I
2202EFEMP1DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5EGF containing fibulin-like extracellular matrix protein 12p16CV:PGCnp
PMID:cooccur
55704CCDC88AAPE | GIRDIN | GIV | GRDN | HkRP1 | KIAA1212coiled-coil domain containing 88A2p16.1CV:PGCnp
Network
PMID:cooccur
53335BCL11ABCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856B-cell CLL/lymphoma 11A2p16.1CV:GWASdb
CV:PGCnp
PMID:cooccur
9378NRXN1Hs.22998 | PTHSL2 | SCZD17neurexin 12p16.3CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1545CYP1B1CP1B | CYPIB1 | GLC3A | P4501B1cytochrome P450 family 1 subfamily B member 12p22.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
64838FNDC4FRCP1fibronectin type III domain containing 42p23.3CV:PGCnp
PMID:cooccur
11117EMILIN1EMI | EMILIN | gp115elastin microfibril interfacer 12p23.3-p23.2CV:PGCnp
1838DTNB-dystrobrevin beta2p24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
10865ARID5AMRF-1 | MRF1 | RP11-363D14AT-rich interaction domain 5A2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7535ZAP70SRK | STCD | STD | TZK | ZAP-70zeta chain of T cell receptor associated protein kinase 70kDa2q12CV:PGCnp
GO_Annotation
GSMA_I
8809IL18R1CD218a | CDw218a | IL-1Rrp | IL18RA | IL1RRPinterleukin 18 receptor 12q12Association
CV:PGCnp
Expression
GR_WM
GSMA_I
PMID:cooccur
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
7850IL1R2CD121b | CDw121b | IL-1R-2 | IL-1RT-2 | IL-1RT2 | IL1R2c | IL1RBinterleukin 1 receptor type 22q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
7851MALLBENEmal, T-cell differentiation protein-like2q13CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
274BIN1AMPH2 | AMPHL | SH3P9bridging integrator 12q14CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
55843ARHGAP15BM046Rho GTPase activating protein 152q22.2-q22.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
4065LY75CD205 | CLEC13B | DEC-205 | GP200-MR6 | LY-75lymphocyte antigen 752q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
5937RBMS1C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1RNA binding motif, single stranded interacting protein 12q24.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
1803DPP4ADABP | ADCP2 | CD26 | DPPIV | TP103dipeptidyl peptidase 42q24.3CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
2487FRZBFRE | FRITZ | FRP-3 | FRZB-1 | FRZB-PEN | FRZB1 | FZRB | OS1 | SFRP3 | SRFP3 | hFIZfrizzled-related protein2q32.1CV:GWASdb
CV:PGCnp
Expression
843CASP10ALPS2 | FLICE2 | MCH4caspase 102q33-q34CV:PGCnp
DMG:Wockner_2014
1674DESCSM1 | CSM2 | LGMD2Rdesmin2q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2043EPHA4HEK8 | SEK | TYRO1EPH receptor A42q36.1CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
55619DOCK10DRIP2 | Nbla10300 | ZIZ3dedicator of cytokinesis 102q36.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
CompositeSet
81618ITM2CBRI3 | BRICD2C | E25 | E25C | ITM3integral membrane protein 2C2q37CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3431SP110IFI41 | IFI75 | IPR1 | VODISP110 nuclear body protein2q37.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
11262SP140LYSP100 | LYSP100-A | LYSP100-BSP140 nuclear body protein2q37.1CV:PGCnp
50853VILL-villin-like3p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
729230CCR2CC-CKR-2 | CCR-2 | CCR2A | CCR2B | CD192 | CKR2 | CKR2A | CKR2B | CMKBR2 | MCP-1-RC-C motif chemokine receptor 23p21.31CV:PGCnp
PMID:cooccur
6304SATB1-SATB homeobox 13p23CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
23228PLCL2PLCE2phospholipase C like 23p24.3CV:PGCnp
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
5021OXTROT-Roxytocin receptor3p25CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
10752CHL1CALL | L1CAM2cell adhesion molecule L1 like3p26.1Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
5627PROS1PROS | PS21 | PS22 | PS23 | PS24 | PS25 | PSA | THPH5 | THPH6protein S (alpha)3q11.2CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
10225CD96TACTILECD96 molecule3q13.13-q13.2CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
7018TFHEL-S-71p | PRO1557 | PRO2086 | TFQTL1transferrin3q22.1Association
CV:PGCnp
CV:PheWAS
Network
PMID:cooccur
4311MMECALLA | CD10 | NEP | SFEmembrane metallo-endopeptidase3q25.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
27074LAMP3CD208 | DC LAMP | DC-LAMP | DCLAMP | LAMP | LAMP-3 | TSC403lysosomal associated membrane protein 33q26.3-q27CV:GWASdb
CV:PGCnp
6480ST6GAL1SIAT1 | ST6GalI | ST6NST6 beta-galactosamide alpha-2,6-sialyltranferase 13q27.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
8626TP63AIS | B(p51A) | B(p51B) | EEC3 | KET | LMS | NBP | OFC8 | RHS | SHFM4 | TP53CP | TP53L | TP73L | p40 | p51 | p53CP | p63 | p73H | p73Ltumor protein p633q28CV:PGCnp
CV:PheWAS
Network
952CD38ADPRC 1 | ADPRC1CD38 molecule4p15Association
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
23231SEL1L3Sel-1L3SEL1L family member 34p15.2CV:PGCnp
CV:PheWAS
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
3815KITC-Kit | CD117 | PBT | SCFRKIT proto-oncogene receptor tyrosine kinase4q12CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
26228STAP1BRDG1 | STAP-1signal transducing adaptor family member 14q13.2CV:PGCnp
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
51316PLAC8C15 | DGIC | PNAS-144 | onzinplacenta specific 84q21.22CV:PGCnp
DMG:Jaffe_2016
8404SPARCL1MAST 9 | MAST9 | PIG33 | SC1SPARC like 14q22.1CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
125ADH1BADH2 | HEL-S-117alcohol dehydrogenase 1B (class I), beta polypeptide4q23Association
CV:PGCnp
PMID:cooccur
51705EMCNEMCN2 | MUC14endomucin4q24CV:GWASdb
CV:PGCnp
55024BANK1BANKB-cell scaffold protein with ankyrin repeats 14q24CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
3426CFIAHUS3 | ARMD13 | C3BINA | C3b-INA | FI | IF | KAFcomplement factor I4q25CV:PGCnp
GO_Annotation
PMID:cooccur
51176LEF1LEF-1 | TCF10 | TCF1ALPHA | TCF7L3lymphoid enhancer binding factor 14q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
287ANK2ANK-2 | LQT4 | brank-2ankyrin 2, neuronal4q25-q27CV:GWASdb
CV:PGCnp
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4306NR3C2MCR | MLR | MR | NR3C2VITnuclear receptor subfamily 3 group C member 24q31.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1363CPECPHcarboxypeptidase E4q32.3CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
730C7-complement component 75p13CV:PGCnp
PMID:cooccur
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
2533FYBADAP | PRO0823 | SLAP-130 | SLAP130FYN binding protein5p13.1CV:GWASdb
CV:PGCnp
GO_Annotation
3003GZMKTRYP2granzyme K5q11.2CV:PGCnp
GO_Annotation
5295PIK3R1AGM7 | GRB1 | IMD36 | p85 | p85-ALPHAphosphoinositide-3-kinase regulatory subunit 15q13.1CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
PMID:cooccur
4208MEF2CC5DELq14.3 | DEL5q14.3myocyte enhancer factor 2C5q14.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
25816TNFAIP8GG2-1 | MDC-3.13 | NDED | SCC-S2 | SCCS2TNF alpha induced protein 85q23.1CV:PGCnp
DMG:Wockner_2014
1036CDO1-cysteine dioxygenase type 15q23.2CV:PGCnp
DMG:Jaffe_2016
6414SEPP1SELP | SEPP | SePselenoprotein P, plasma, 15q31CV:PGCnp
GO_Annotation
PMID:cooccur
3702ITKEMT | LPFS1 | LYK | PSCTK2IL2 inducible T-cell kinase5q31-q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
51237MZB1MEDA-7 | PACAP | pERp1marginal zone B and B1 cell specific protein5q31.2GSMA_I
PMID:cooccur
972CD74DHLAG | HLADG | II | Ia-GAMMACD74 molecule5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
6793STK10LOK | PRO2729serine/threonine kinase 105q35.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
1794DOCK2IMD40dedicator of cytokinesis 25q35.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
65989DLK2DLK-2 | EGFL9delta-like 2 homolog (Drosophila)6p21.1CV:PGCnp
GSMA_IIE
PMID:cooccur
3112HLA-DOBDOBmajor histocompatibility complex, class II, DO beta6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3113HLA-DPA1DP(W3) | DP(W4) | HLA-DP1A | HLADP | HLASB | PLT1major histocompatibility complex, class II, DP alpha 16p21.3CV:PGCnp
GSMA_I
PMID:cooccur
3119HLA-DQB1CELIAC1 | HLA-DQB | IDDM1major histocompatibility complex, class II, DQ beta 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3122HLA-DRAHLA-DRA1 | MLRWmajor histocompatibility complex, class II, DR alpha6p21.3CV:GWASdb
CV:PGCnp
CV:Ripke_2013
GSMA_I
PMID:cooccur
3123HLA-DRB1DRB1 | DRw10 | HLA-DR1B | HLA-DRB | SS1major histocompatibility complex, class II, DR beta 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
10384BTN3A3BTF3 | BTN3.3butyrophilin subfamily 3 member A36p21.3CV:PGCnp
GSMA_I
PMID:cooccur
199AIF1AIF-1 | IBA1 | IRT-1 | IRT1allograft inflammatory factor 16p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
7148TNXBEDS3 | HXBL | TENX | TN-X | TNX | TNXB1 | TNXB2 | TNXBS | VUR8 | XB | XBStenascin XB6p21.3Association
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
259197NCR31C7 | CD337 | LY117 | MALS | NKp30natural cytotoxicity triggering receptor 36p21.3CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
7940LST1B144 | D6S49E | LST-1leukocyte specific transcript 16p21.3CV:PGCnp
GO_Annotation
GSMA_I
4050LTBTNFC | TNFSF3 | TNLG1C | p33lymphotoxin beta6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
11118BTN3A2BT3.2 | BTF4 | BTN3.2 | CD277butyrophilin subfamily 3 member A26p22.1CV:GWASdb
CV:PGCnp
GSMA_I
3400ID4IDB4 | bHLHb27inhibitor of DNA binding 4, HLH protein6p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
9750FAM65BC6orf32 | DFNB104 | DIFF40 | DIFF48 | MYONAP | PL48family with sequence similarity 65 member B6p22.3-p21.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
2162F13A1F13Acoagulation factor XIII A chain6p25.3-p24.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
4907NT5ECALJA | CD73 | E5NT | NT | NT5 | NTE | eN | eNT5'-nucleotidase ecto6q14-q21CV:GWASdb
CV:PGCnp
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
3097HIVEP2HIV-EP2 | MBP-2 | MIBP1 | SHN2 | ZAS2 | ZNF40Bhuman immunodeficiency virus type I enhancer binding protein 26q23-q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
23345SYNE18B | ARCA1 | C6orf98 | CPG2 | EDMD4 | MYNE1 | Nesp1 | SCAR8 | dJ45H2.2spectrin repeat containing, nuclear envelope 16q25CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
135138PACRGGLUP | HAK005771 | PARK2CRGPARK2 co-regulated6q26CV:PGCnp
DMG:Wockner_2014
1235CCR6BN-1 | C-C CKR-6 | CC-CKR-6 | CCR-6 | CD196 | CKR-L3 | CKRL3 | CMKBR6 | DCR2 | DRY6 | GPR29 | GPRCY4 | STRL22C-C motif chemokine receptor 66q27CV:PGCnp
CV:PheWAS
358AQP1AQP-CHIP | CHIP28 | COaquaporin 1 (Colton blood group)7p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
9844ELMO1CED-12 | CED12 | ELMO-1engulfment and cell motility 17p14.1CV:PGCnp
DEG:Maycox_2009
313AOAH-acyloxyacyl hydrolase7p14.2CV:GWASdb
CV:PGCnp
Expression
445347TARPCD3G | TCRG | TCRGC1 | TCRGC2 | TCRGVTCR gamma alternate reading frame protein7p15-p14CV:PGCnp
PMID:cooccur
54504CPVLHVLPcarboxypeptidase, vitellogenic like7p15.1CV:PGCnp
GO_Annotation
PMID:cooccur
3205HOXA9ABD-B | HOX1 | HOX1.7 | HOX1Ghomeobox A97p15.2DMG:Wockner_2014
3569IL6BSF-2 | BSF2 | CDF | HGF | HSF | IFN-beta-2 | IFNB2 | IL-6interleukin 67p21CV:GWASdb
CV:PGCnp
PMID:cooccur
25928SOSTDC1CDA019 | ECTODIN | USAG1sclerostin domain containing 17p21.1CV:GWASdb
CV:PGCnp
3082HGFDFNB39 | F-TCF | HGFB | HPTA | SFhepatocyte growth factor7q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
10156RASA4CAPRI | GAPLRAS p21 protein activator 47q22Expression
5649RELNETL7 | LIS2 | PRO1598 | RLreelin7q22Association
Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
4034LRCH4LRN | LRRN1 | LRRN4 | PP14183leucine-rich repeats and calponin homology (CH) domain containing 47q22CV:PGCnp
DEG:Maycox_2009
GO_Annotation
79037PVRIGC7orf15poliovirus receptor related immunoglobulin domain containing7q22.1DMG:vanEijk_2014
54674LRRN3FIGLER5 | NLRR-3 | NLRR3leucine rich repeat neuronal 37q31.1CV:PGCnp
857CAV1BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21caveolin 17q31.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
10157AASSLKR/SDH | LKRSDH | LORSDHaminoadipate-semialdehyde synthase7q31.3CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
5764PTNHARP | HBGF8 | HBNF | NEGF1pleiotrophin7q33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Potential synaptic genes
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
5368PNOCN/OFQ | NOP | OFQ | PPNOC | ppN/OFQprepronociceptin8p21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
1191CLUAAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2clusterin8p21-p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5533PPP3CCCALNA3 | CNA3 | PP2Bgammaprotein phosphatase 3 catalytic subunit gamma8p21.3Association
Core
CV:PGCnp
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
55790CSGALNACT1CSGalNAcT-1 | ChGn | beta4GalNAcTchondroitin sulfate N-acetylgalactosaminyltransferase 18p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
4023LPLHDLCQ11 | LIPDlipoprotein lipase8p22CV:GWASdb
CV:PGCnp
CV:PheWAS
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
285ANGPT2AGPT2 | ANG2angiopoietin 28p23.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3574IL7IL-7interleukin 78q12-q13CV:GWASdb
CV:PGCnp
4067LYNJTK8 | p53Lyn | p56LynLYN proto-oncogene, Src family tyrosine kinase8q13CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
2669GEMKIRGTP binding protein overexpressed in skeletal muscle8q13-q21CV:PGCnp
PMID:cooccur
2167FABP4A-FABP | AFABP | ALBP | HEL-S-104 | aP2fatty acid binding protein 48q21DNM:Fromer_2014
PMID:cooccur
CompositeSet
23643LY96ESOP-1 | MD-2 | MD2 | ly-96lymphocyte antigen 968q21.11CV:PGCnp
DMG:vanEijk_2014
862RUNX1T1AML1-MTG8 | AML1T1 | CBFA2T1 | CDR | ETO | MTG8 | ZMYND2runt related transcription factor 1; translocated to, 1 (cyclin D related)8q22CV:PGCnp
DMG:Wockner_2014
79870BAALC-brain and acute leukemia, cytoplasmic8q22.3CV:PGCnp
DMG:Wockner_2014
7373COL14A1UNDcollagen type XIV alpha 18q23CV:PGCnp
DMG:Jaffe_2016
6503SLASLA1 | SLAPSrc-like-adaptor8q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5168ENPP2ATX | ATX-X | AUTOTAXIN | LysoPLD | NPP2 | PD-IALPHA | PDNP2ectonucleotide pyrophosphatase/phosphodiesterase 28q24.1CV:PGCnp
PMID:cooccur
6363CCL19CKb11 | ELC | MIP-3b | MIP3B | SCYA19C-C motif chemokine ligand 199p13CV:PGCnp
6366CCL216Ckine | CKb9 | ECL | SCYA21 | SLC | TCA4C-C motif chemokine ligand 219p13CV:PGCnp
5079PAX5ALL3 | BSAPpaired box 59p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
27240SIT1SIT | SIT-Rsignaling threshold regulating transmembrane adaptor 19p13-p12CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
216ALDH1A1ALDC | ALDH-E1 | ALDH1 | ALDH11 | HEL-9 | HEL-S-53e | HEL12 | PUMB1 | RALDH1aldehyde dehydrogenase 1 family member A19q21.13CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
5125PCSK5PC5 | PC6 | PC6A | SPC6proprotein convertase subtilisin/kexin type 59q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
4915NTRK2GP145-TrkB | TRKB | trk-Bneurotrophic tyrosine kinase, receptor, type 29q22.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10319LAMC3OCCMlaminin subunit gamma 39q34.12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
5730PTGDSL-PGDS | LPGDS | PDS | PGD2 | PGDS | PGDS2prostaglandin D2 synthase9q34.2-q34.3PMID:cooccur
7102TSPAN7A15 | CCG-B7 | CD231 | DXS1692E | MRX58 | MXS1 | TALLA-1 | TM4SF2 | TM4SF2btetraspanin 7Xp11.4CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1756DMDBMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85dystrophinXp21.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
1438CSF2RACD116 | CDw116 | CSF2R | CSF2RAX | CSF2RAY | CSF2RX | CSF2RY | GM-CSF-R-alpha | GMCSFR | GMR | SMDP4colony stimulating factor 2 receptor alpha subunitXp22.32 and Yp11.3Association
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
4674NAP1L2BPXnucleosome assembly protein 1 like 2Xq13DNM:Fromer_2014CompositeSet
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
695BTKAGMX1 | AT | ATK | BPK | IMD1 | PSCTK1 | XLABruton tyrosine kinaseXq21.33-q22CV:PGCnp
DNM:Kranz_2015
Network
PMID:cooccur
959CD40LGCD154 | CD40L | HIGM1 | IGM | IMD3 | T-BAM | TNFSF5 | TRAP | gp39 | hCD40LCD40 ligandXq26DMG:vanEijk_2014
393ARHGAP4C1 | RGC1 | RhoGAP4 | SrGAP4 | p115Rho GTPase activating protein 4Xq28CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
1193CLIC2CLIC2b | MRXS32 | XAP121chloride intracellular channel 2Xq28CV:PGCnp
PMID:cooccur