Search results: The pahtway p3673 has 108 genes in the original annotation. Currently, there are 64 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
5950RBP4MCOPCB10 | RDCCASretinol binding protein 410q23.33CV:PGCnp
PMID:cooccur
847CAT-catalase11p13CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6288SAA1PIG4 | SAA | SAA2 | TP53I4serum amyloid A111p15.1CV:GWASdb
CV:PGCnp
9965FGF19-fibroblast growth factor 1911q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
2249FGF4HBGF-4 | HST | HST-1 | HSTF1 | K-FGF | KFGFfibroblast growth factor 411q13.3CV:PGCnp
DMG:Wockner_2014
4322MMP13CLG3 | MANDP1 | MMP-13matrix metallopeptidase 1311q22.3CV:GWASdb
CV:PGCnp
8835SOCS2CIS2 | Cish2 | SOCS-2 | SSI-2 | SSI2 | STATI2suppressor of cytokine signaling 212qCV:PGCnp
PMID:cooccur
904CCNT1CCNT | CYCT1 | HIVE1cyclin T112q13.11DMG:Nishioka_2013
Expression
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
56890MDM1-Mdm1 nuclear protein12q15CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
1634DCNCSCD | DSPG2 | PG40 | PGII | PGS2 | SLRR1Bdecorin12q21.33CV:PGCnp
Network
55384MEG3FP504 | GTL2 | LINC00023 | NCRNA00023 | PRO0518 | PRO2160 | onco-lncRNA-83 | prebp1maternally expressed 3 (non-protein coding)14q32CV:PGCnp
DMG:Wockner_2014
Expression
825CAPN3CANP3 | CANPL3 | LGMD2 | LGMD2A | nCL-1 | p94calpain 315q15.1CV:PGCnp
4916NTRK3GP145-TrkC | TRKC | gp145(trkC)neurotrophic tyrosine kinase, receptor, type 315q25CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
6357CCL13CKb10 | MCP-4 | NCC-1 | NCC1 | SCYA13 | SCYL1C-C motif chemokine ligand 1317q11.2PMID:cooccur
3886KRT35HA5 | Ha-5 | KRTHA5 | hHa5keratin 3517q21.2CV:GWASdb
CV:PGCnp
3759KCNJ2ATFB9 | HHBIRK1 | HHIRK1 | IRK1 | KIR2.1 | LQT7 | SQT3potassium voltage-gated channel subfamily J member 217q24.3CV:PGCnp
DEG:Zhao_2015
Network
116ADCYAP1PACAPadenylate cyclase activating polypeptide 1 (pituitary)18p11Association
CV:PGCnp
GO_Annotation
PMID:cooccur
9050PSTPIP2MAYPproline-serine-threonine phosphatase interacting protein 218q12|tdb7990CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
1264CNN1HEL-S-14 | SMCC | Sm-Calpcalponin 119p13.2CV:PGCnp
DMG:Wockner_2014
Network
5329PLAURCD87 | U-PAR | UPAR | URKRplasminogen activator, urokinase receptor19q13CV:PGCnp
PMID:cooccur
344APOC2APO-CII | APOC-IIapolipoprotein C-II19q13.2CV:PGCnp
2944GSTM1GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1glutathione S-transferase mu 11p13.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
51686OAZ3AZ3 | OAZ-t | TISP15ornithine decarboxylase antizyme 31q21.3DMG:Wockner_2014
GSMA_I
GSMA_IIA
55600ITLN1HL-1 | HL1 | INTL | ITLN | LFR | hIntL | omentinintelectin 11q21.3CV:PGCnp
CV:PheWAS
GO_Annotation
GSMA_I
GSMA_IIA
5087PBX1-pre-B-cell leukemia homeobox 11q23CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
5335PLCG1NCKAP3 | PLC-II | PLC1 | PLC148 | PLCgamma1phospholipase C gamma 120q12-q13.1CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
4282MIFGIF | GLIF | MMIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)22q11.23DNM:Fromer_2014
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
307ANXA4ANX4 | HEL-S-274 | P32.5 | PAP-II | PIG28 | PP4-X | ZAP36annexin A42p13CV:PGCnp
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
55137FIGN-fidgetin2q24.3CV:PGCnp
GSMA_IIA
PMID:cooccur
25953PNKDBRP17 | DYT8 | FKSG19 | FPD1 | KIPP1184 | MR-1 | MR1 | PDC | PKND1 | TAHCCP2paroxysmal nonkinesigenic dyskinesia2q35CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
4759NEU2SIAL2neuraminidase 2 (cytosolic sialidase)2q37CV:GWAScat
CV:PGCnp
4615MYD88MYD88Dmyeloid differentiation primary response 883p22CV:PGCnp
GSMA_I
PMID:cooccur
6336SCN10AFEPS2 | Nav1.8 | PN3 | SNS | hPN3sodium voltage-gated channel alpha subunit 103p22.2CV:PGCnp
GSMA_I
PMID:cooccur
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
1356CPCP-2ceruloplasmin (ferroxidase)3q23-q25CV:PGCnp
PMID:cooccur
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
5648MASP13MC1 | CRARF | CRARF1 | MAP1 | MASP | MASP3 | MAp44 | PRSS5 | RaRFmannan binding lectin serine peptidase 13q27-q28CV:GWASdb
CV:PGCnp
GO_Annotation
2261FGFR3ACH | CD333 | CEK2 | HSFGFR3EX | JTK4fibroblast growth factor receptor 34p16.3CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
2638GCDBP | DBP/GC | GRD3 | Gc-MAF | GcMAF | HEL-S-51 | VDBG | VDBPgroup-specific component (vitamin D binding protein)4q12-q13Association
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GR_WM
PMID:cooccur
174AFPAFPD | FETA | HPAFPalpha fetoprotein4q13.3CV:PGCnp
PMID:cooccur
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
27306HPGDSGSTS | GSTS1 | GSTS1-1 | PGD2 | PGDShematopoietic prostaglandin D synthase4q22.3CV:GWASdb
CV:PGCnp
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
56172ANKHANK | CCAL2 | CMDJ | CPPDD | HANK | MANKANKH inorganic pyrophosphate transport regulator5p15.1CV:PGCnp
DMG:Nishioka_2013
2561GABRB2-gamma-aminobutyric acid type A receptor beta2 subunit5q34Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
2729GCLCGCL | GCS | GLCL | GLCLCglutamate-cysteine ligase catalytic subunit6p12CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
2968GTF2H4P52 | TFB2 | TFIIHgeneral transcription factor IIH subunit 46p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6890TAP1ABC17 | ABCB2 | APT1 | D6S114E | PSF-1 | PSF1 | RING4 | TAP1*0102N | TAP1Ntransporter 1, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
154150HDGFL1PWWP1 | dJ309H15.1hepatoma derived growth factor-like 16p22.3CV:GWASdb
CV:PGCnp
GSMA_I
7803PTP4A1HH72 | PRL-1 | PRL1 | PTP(CAAX1) | PTPCAAX1protein tyrosine phosphatase type IVA, member 16q12CV:GWASdb
CV:PGCnp
2770GNAI1GiG protein subunit alpha i17q21CV:PGCnp
Network
PMID:cooccur
CANABINOID
G-PROTEIN RELAY
SEROTONIN
Potential synaptic genes
9723SEMA3EM-SEMAH | M-SemaK | SEMAH | coll-5semaphorin 3E7q21.11CV:GWASdb
CV:PGCnp
GO_Annotation
4885NPTX2NARP | NP-II | NP2neuronal pentraxin 27q21.3-q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Potential synaptic genes
857CAV1BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21caveolin 17q31.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
858CAV2CAVcaveolin 27q31.1CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
84912SLC35B4YEA | YEA4solute carrier family 35 member B47q33CV:PGCnp
PMID:cooccur
954ENTPD2CD39L1 | NTPDase-2ectonucleoside triphosphate diphosphohydrolase 29q34PMID:cooccur
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
10044SH2D3CCHAT | NSP3 | PRO34088 | SHEP1SH2 domain containing 3C9q34.11CV:PGCnp
DMG:vanEijk_2014
138311FAM69BC9orf136 | pp6977family with sequence similarity 69 member B9q34.3CV:PGCnp
DMG:Wockner_2014
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes