Search results: The pahtway p4220 has 721 genes in the original annotation. Currently, there are 492 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
84898PLXDC2TEM7Rplexin domain containing 210p12.31CV:PGCnp
DMG:Nishioka_2013
10771ZMYND11BRAM1 | BS69 | MRD30zinc finger MYND-type containing 1110p14CV:PGCnp
DNM:Fromer_2014
CompositeSet
1316KLF6BCD1 | CBA1 | COPEB | CPBP | GBF | PAC1 | ST12 | ZF9Kruppel-like factor 610p15Association
CV:PGCnp
DMG:Jaffe_2016
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
5588PRKCQPRKCT | nPKC-thetaprotein kinase C theta10p15CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Ascano FMRP targets
22982DIP2CKIAA0934disco interacting protein 2 homolog C10p15.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1959EGR2AT591 | CMT1D | CMT4E | KROX20early growth response 210q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
221035REEP3C10orf74 | Yip2breceptor accessory protein 310q21.3CV:PGCnp
DMG:Wockner_2014
2894GRID1GluD1glutamate ionotropic receptor delta type subunit 110q22Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
54541DDIT4Dig2 | REDD-1 | REDD1DNA damage inducible transcript 410q22.1CV:PGCnp
DMG:Jaffe_2016
84858ZNF503NOLZ-1 | NOLZ1 | Nlz2zinc finger protein 50310q22.2CV:PGCnp
3778KCNMA1BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1potassium calcium-activated channel subfamily M alpha 110q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1791DNTTTDTDNA nucleotidylexotransferase10q23-q24CV:PGCnp
403ARL3ARFL3ADP ribosylation factor like GTPase 310q23.3CV:PGC128
CV:PGCnp
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
953ENTPD1ATPDase | CD39 | NTPDase-1 | SPG64ectonucleoside triphosphate diphosphohydrolase 110q24CV:PGCnp
DMG:vanEijk_2014
159296NKX2-3CSX3 | NK2.3 | NKX2.3 | NKX2C | NKX4-3NK2 homeobox 310q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
9531BAG3BAG-3 | BIS | CAIR-1 | MFM6BCL2 associated athanogene 310q25.2-q26.2CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
5654HTRA1ARMD7 | CADASIL2 | CARASIL | HtrA | L56 | ORF480 | PRSS11HtrA serine peptidase 110q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
4038LRP4CLSS | CMS17 | LRP-4 | LRP10 | MEGF7 | SOST2LDL receptor related protein 411p11.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
Ascano FMRP targets
26298EHFESE3 | ESE3B | ESEJETS homologous factor11p12CV:GWAScat
CV:PGCnp
PMID:cooccur
54765TRIM44DIPB | HSA249128 | MC7tripartite motif containing 4411p13CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
4005LMO2RBTN2 | RBTNL1 | RHOM2 | TTG2LIM domain only 211p13CV:PGCnp
DMG:Jaffe_2016
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
272AMPD3-adenosine monophosphate deaminase 311p15CV:GWASdb
DMG:Wockner_2014
10418SPON1VSGP/F-spondin | f-spondinspondin 111p15.2CV:GWASdb
CV:PGCnp
PMID:cooccur
27122DKK3REIC | RIGdickkopf WNT signaling pathway inhibitor 311p15.2CV:PGCnp
PMID:cooccur
5741PTHPTH1parathyroid hormone11p15.3CV:PGCnp
Network
PMID:cooccur
55553SOX6HSSOX6 | SOXDSRY-box 611p15.3CV:PGCnp
PMID:cooccur
112464PRKCDBPCAVIN3 | HSRBC | SRBC | cavin-3protein kinase C delta binding protein11p15.4CV:GWASdb
CV:PGCnp
7262PHLDA2BRW1C | BWR1C | HLDA2 | IPL | TSSC3pleckstrin homology like domain family A member 211p15.4CV:PGCnp
DMG:Wockner_2014
8495PPFIBP2Cclp1PPFIA binding protein 211p15.4CV:GWASdb
CV:PGCnp
PROTEIN CLUSTERING
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
23410SIRT3SIR2L3sirtuin 311p15.5DMG:Jaffe_2016
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
10410IFITM31-8U | DSPA2b | IP15interferon induced transmembrane protein 311p15.5CV:PGCnp
DEG:Sanders_2013
Expression
PMID:cooccur
7106TSPAN4NAG-2 | NAG2 | TETRASPAN | TM4SF7 | TSPAN-4tetraspanin 411p15.5CV:PGCnp
DMG:Wockner_2014
3665IRF7IMD39 | IRF-7H | IRF7A | IRF7B | IRF7C | IRF7Hinterferon regulatory factor 711p15.5CV:PGCnp
PMID:cooccur
4046LSP1WP34 | pp52lymphocyte-specific protein 111p15.5CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5837PYGM-phosphorylase, glycogen, muscle11q12-q13.2DMG:Wockner_2014
PMID:cooccur
6520SLC3A24F2 | 4F2HC | 4T2HC | CD98 | CD98HC | MDU1 | NACAEsolute carrier family 3 member 211q13CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
PMID:cooccur
CELL METABOLISM
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
8722CTSFCATSF | CLN13cathepsin F11q13CV:PGCnp
5138PDE2ACGS-PDE | PDE2A1 | PED2A4 | cGSPDEphosphodiesterase 2A11q13.4CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
11098PRSS23SIG13 | SPUVE | ZSIG13protease, serine 2311q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
28970C11orf54PTD012 | PTOD012chromosome 11 open reading frame 5411q21CV:PGCnp
DMG:Nishioka_2013
7225TRPC6FSGS2 | TRP6transient receptor potential cation channel subfamily C member 611q22.1CV:PGCnp
PMID:cooccur
837CASP4ICE(rel)II | ICEREL-II | ICH-2 | Mih1/TX | TXcaspase 411q22.2-q22.3CV:PGCnp
DNM:Girard_2011
GSMA_I
Network
PMID:cooccur
CompositeSet
3606IL18IGIF | IL-18 | IL-1g | IL1F4interleukin 1811q23.1Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
4684NCAM1CD56 | MSK39 | NCAMneural cell adhesion molecule 111q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
23705CADM1BL2 | IGSF4 | IGSF4A | NECL2 | Necl-2 | RA175 | ST17 | SYNCAM | TSLC1 | sTSLC-1 | sgIGSF | synCAM1cell adhesion molecule 111q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
6876TAGLNSM22 | SMCC | TAGLN1 | WS3-10transgelin11q23.2GSMA_I
6653SORL1C11orf32 | LR11 | LRP9 | SORLA | SorLA-1 | gp250sortilin-related receptor, L(DLR class) A repeats containing11q23.2-q24.2CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
9099USP2UBP41 | USP9ubiquitin specific peptidase 211q23.3CV:PGCnp
GSMA_I
PMID:cooccur
23387SIK3L19 | QSK | SIK-3SIK family kinase 311q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
90952ESAMW117mendothelial cell adhesion molecule11q24.2CV:PGCnp
DNM:Xu_2012
GO_Annotation
CompositeSet
9743ARHGAP32GC-GAP | GRIT | PX-RICS | RICS | p200RhoGAP | p250GAPRho GTPase activating protein 3211q24.3CV:GWASdb
CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8538BARX2-BARX homeobox 211q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
65981CAPRIN2C1QDC1 | EEG-1 | EEG1 | RNG140caprin family member 212p11CV:PGCnp
54477PLEKHA5PEPP-2 | PEPP2pleckstrin homology domain containing A512p12CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5288PIK3C2GPI3K-C2-gamma | PI3K-C2GAMMAphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma12p12Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
4257MGST1GST12 | MGST | MGST-Imicrosomal glutathione S-transferase 112p12.3-p12.1CV:PGCnp
939CD27S152 | S152. LPFS2 | T14 | TNFRSF7 | Tp55CD27 molecule12p13DEG:Sanders_2013
DMG:vanEijk_2014
PMID:cooccur
1911PHC1EDR1 | HPH1 | MCPH11 | RAE28polyhomeotic homolog 112p13CV:PGCnp
DMG:Jaffe_2016
Expression
Chromatin Remodeling Genes
715C1R-complement C1r subcomponent12p13CV:PGCnp
GO_Annotation
23710GABARAPL1APG8-LIKE | APG8L | ATG8 | ATG8B | ATG8L | GEC1GABA(A) receptor-associated protein like 112p13.2CV:GWASdb
CV:PGCnp
GO_Annotation
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
3736KCNA1AEMK | EA1 | HBK1 | HUK1 | KV1.1 | MBK1 | MK1 | RBK1potassium voltage-gated channel subfamily A member 112p13.32CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
EXCITABILITY
8835SOCS2CIS2 | Cish2 | SOCS-2 | SSI-2 | SSI2 | STATI2suppressor of cytokine signaling 212qCV:PGCnp
PMID:cooccur
1272CNTN1F3 | GP135 | MYPCNcontactin 112q12CV:PGCnp
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3164NR4A1GFRP1 | HMR | N10 | NAK-1 | NGFIB | NP10 | NUR77 | TR3nuclear receptor subfamily 4 group A member 112q13CV:PGCnp
Network
PMID:cooccur
1649DDIT3CEBPZ | CHOP | CHOP-10 | CHOP10 | GADD153DNA damage inducible transcript 312q13.1-q13.2DMG:Jaffe_2016
PMID:cooccur
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
112ADCY6AC6 | LCCS8adenylate cyclase 612q13.12CV:PGCnp
Network
3853KRT6ACK-6C | CK-6E | CK6A | CK6C | CK6D | K6A | K6C | K6D | KRT6C | KRT6D | PC3keratin 6A12q13.13CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
506ATP5BATPMB | ATPSB | HEL-S-271ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide12q13.13DMG:Jaffe_2016
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
160622GRASPTAMALINGRP1 (general receptor for phosphoinositides 1)-associated scaffold protein12q13.13DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Potential synaptic genes
3221HOXC4HOX3 | HOX3E | cp19homeobox C412q13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
4665NAB2MADERNGFI-A binding protein 212q13.3CV:PGC128
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
22822PHLDA1DT1P1B11 | PHRIP | TDAG51pleckstrin homology like domain family A member 112q15CV:GWASdb
CV:PGCnp
PMID:cooccur
8549LGR5FEX | GPR49 | GPR67 | GRP49 | HG38leucine-rich repeat containing G protein-coupled receptor 512q21.1CV:PGCnp
DMG:Wockner_2014
Expression
488ATP2A2ATP2B | DAR | DD | SERCA2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 212q24.11CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
84260TCHPTpMstrichoplein keratin filament binding12q24.11CV:PGCnp
DMG:Jaffe_2016
26353HSPB8CMT2L | DHMN2 | E2IG1 | H11 | HMN2 | HMN2A | HSP22heat shock protein family B (small) member 812q24.23CV:PGCnp
4326MMP17MMP-17 | MT4-MMP | MT4MMP | MTMMP4matrix metallopeptidase 1712q24.3CV:PGCnp
DMG:Wockner_2014
353116RILPL1GOSPEL | RLP1Rab interacting lysosomal protein-like 112q24.31CV:PGCnp
5025P2RX4P2X4 | P2X4Rpurinergic receptor P2X 412q24.32CV:PGCnp
GO_Annotation
10186LHFP-lipoma HMGIC fusion partner13q12CV:PGCnp
DMG:Nishioka_2013
26524LATS2KPMlarge tumor suppressor kinase 213q12.11DMG:Wockner_2014Ascano FMRP targets
219409GSX1GSH1 | Gsh-1GS homeobox 113q12.2CV:PGCnp
PMID:cooccur
26960NBEABCL8B | LYST2neurobeachin13q13CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
8848TSC22D1Ptg-2 | TGFB1I4 | TSC22TSC22 domain family member 113q14CV:PGCnp
DMG:Nishioka_2013
Network
CompositeSet
Darnell FMRP targets
1948EFNB2EPLG5 | HTKL | Htk-L | LERK5ephrin-B213q33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
1284COL4A2ICH | POREN2collagen type IV alpha 213q34CV:GWAScat
CV:GWASdb
CV:PGCnp
55647RAB20-RAB20, member RAS oncogene family13q34CV:GWASdb
CV:PGCnp
122704MRPL52-mitochondrial ribosomal protein L5214q11.2CV:GWASdb
GSMA_I
57447NDRG2SYLDNDRG family member 214q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
4792NFKBIAIKBA | MAD-3 | NFKBINFKB inhibitor alpha14q13CV:GWASdb
CV:PGCnp
Network
3169FOXA1HNF3A | TCF3Aforkhead box A114q21.1CV:PGCnp
DMG:Wockner_2014
57544TXNDC16ERp90 | KIAA1344thioredoxin domain containing 1614q22.1CV:PGCnp
DMG:Jaffe_2016
10979FERMT2KIND2 | MIG2 | PLEKHC1 | UNC112 | UNC112B | mig-2fermitin family member 214q22.1CV:PGCnp
DMG:Wockner_2014
Expression
122786FRMD6C14orf31 | EX1 | Willin | c14_5320FERM domain containing 614q22.1CV:PGCnp
22795NID2NID-2nidogen 214q22.1CV:PGCnp
DMG:Wockner_2014
3895KTN1CG1 | KNT | MU-RMS-40.19kinectin 114q22.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
2342FNTBFPTBfarnesyltransferase, CAAX box, beta14q23.3CV:PGCnp
3306HSPA2HSP70-2 | HSP70-3heat shock protein family A (Hsp70) member 214q24.1CV:PGCnp
PMID:cooccur
CompositeSet
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
87ACTN1BDPLT15actinin alpha 114q24|14q22-q24CV:PGCnp
CV:PheWAS
DMG:Nishioka_2013
DNM:Fromer_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
11099PTPN21PTPD1 | PTPRL10protein tyrosine phosphatase, non-receptor type 2114q31.3CV:GWASdb
CV:PGCnp
PMID:cooccur
51466EVLRNB6Enah/Vasp-like14q32.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
23368PPP1R13BASPP1 | p53BP2-like | p85protein phosphatase 1 regulatory subunit 13B14q32.33CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Ambalavanan_2016
1396CRIP1CRHP | CRIP | CRP-1 | CRP1cysteine rich protein 114q32.33DMG:Wockner_2014
4692NDNHsT16328 | PWCRnecdin, MAGE family member15q11.2CNV:YES
CV:PGCnp
GO_Annotation
6447SCG57B2 | P7B2 | SGNE1 | SgVsecretogranin V15q13-q14CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
26585GREM1C15DUPq | CKTSF1B1 | CRAC1 | CRCS4 | DAND2 | DRM | DUP15q | GREMLIN | HMPS | HMPS1 | IHG-2 | MPSH | PIG2gremlin 1, DAN family BMP antagonist15q13.3CNV:YES
CV:PGCnp
GO_Annotation
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
7158TP53BP153BP1 | TDRD30 | TP53 | p202 | p53BP1tumor protein p53 binding protein 115q15-q21CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
55930MYO5C-myosin VC15q21CV:PGCnp
DMG:Wockner_2014
2628GATMAGAT | AT | CCDS3glycine amidinotransferase15q21.1DMG:Wockner_2014
567B2MIMD43beta-2-microglobulin15q21.1CV:PGCnp
PMID:cooccur
10681GNB5GB5G protein subunit beta 515q21.2CV:PGCnp
DNM:Fromer_2014
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5873RAB27AGS2 | HsT18676 | RAB27 | RAMRAB27A, member RAS oncogene family15q21.3CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GO_Annotation
23604DAPK2DRP-1 | DRP1death-associated protein kinase 215q22.31CV:PGCnp
Network
10363HMG20AHMGX1 | HMGXB1high mobility group 20A15q24CV:PGCnp
PMID:cooccur
9455HOMER2ACPD | CPD | DFNA68 | HOMER-2 | VESL-2homer scaffolding protein 215q24.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
4240MFGE8BA46 | EDIL1 | HMFG | HsT19888 | MFG-E8 | MFGM | OAcGD3S | SED1 | SPAG10 | hP47milk fat globule-EGF factor 8 protein15q25CV:PGCnp
4205MEF2AADCAD1 | RSRFC4 | RSRFC9 | mef2myocyte enhancer factor 2A15q26CV:PGCnp
PMID:cooccur
28232SLCO3A1OATP-D | OATP3A1 | OATPD | SLC21A11solute carrier organic anion transporter family member 3A115q26CV:GWAScat
CV:PGCnp
PMID:cooccur
5579PRKCBPKC-beta | PKCB | PRKCB1 | PRKCB2protein kinase C beta16p11.2CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
51704GPRC5BRAIG-2 | RAIG2G protein-coupled receptor class C group 5 member B16p12CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_IIE
CompositeSet
4363ABCC1ABC29 | ABCC | GS-X | MRP | MRP1ATP binding cassette subfamily C member 116p13.1CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
115ADCY9AC9 | ACIXadenylate cyclase 916p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
INTRACELLULAR SIGNAL TRANSDUCTION
84662GLIS2NKL | NPHP7GLIS family zinc finger 216p13.3CV:PGCnp
GO_Annotation
64400AKTIPFT1 | FTSAKT interacting protein16q12.2CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
6236RRADRAD | RAD1 | REM3Ras-related associated with diabetes16q22CV:PGCnp
Network
7084TK2MTDPS2 | MTTK | SCA31thymidine kinase 2, mitochondrial16q22-q23.1CV:PGCnp
146198ZFP90FIK | NK10 | ZNF756 | zfp-90ZFP90 zinc finger protein16q22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
7571ZNF23KOX16 | ZNF359 | ZNF612 | Zfp612zinc finger protein 2316q22.2CV:PGCnp
DMG:Nishioka_2013
863CBFA2T3ETO2 | MTG16 | MTGR2 | ZMYND4core-binding factor, runt domain, alpha subunit 2; translocated to, 316q24CV:PGCnp
DMG:Wockner_2014
161882ZFPM1FOG | FOG1 | ZC2HC11A | ZNF408 | ZNF89Azinc finger protein, FOG family member 116q24.2CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
230ALDOCALDCaldolase, fructose-bisphosphate C17cen-q12PMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
51655RASD1AGS1 | DEXRAS1 | MGC:26290RAS, dexamethasone-induced 117p11.2CV:PGCnp
DMG:Nishioka_2013
Network
10743RAI1SMCR | SMSretinoic acid induced 117p11.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23164MPRIPM-RIP | MRIP | RHOIP3 | RIP3 | p116Ripmyosin phosphatase Rho interacting protein17p11.2CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
5376PMP22CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110peripheral myelin protein 2217p12CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
359845FAM101BCFM1family with sequence similarity 101 member B17p13CV:GWASdb
CV:PGCnp
3682ITGAECD103 | HUMINAEintegrin subunit alpha E17p13CV:PGCnp
DMG:Wockner_2014
5187PER1PER | RIGUI | hPERperiod circadian clock 117p13.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
1140CHRNB1ACHRB | CHRNB | CMS1D | CMS2A | CMS2C | SCCMScholinergic receptor nicotinic beta 1 subunit17p13.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
9135RABEP1RAB5EP | RABPT5rabaptin, RAB GTPase binding effector protein 117p13.2CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
5176SERPINF1EPC-1 | OI12 | OI6 | PEDF | PIG35serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 117p13.3CV:PGCnp
GO_Annotation
26022TMEM98TADA1transmembrane protein 9817q11.2CV:PGCnp
DMG:Wockner_2014
6354CCL7FIC | MARC | MCP-3 | MCP3 | NC28 | SCYA6 | SCYA7C-C motif chemokine ligand 717q11.2-q12Network
PMID:cooccur
6352CCL5D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCPC-C motif chemokine ligand 517q12DMG:vanEijk_2014
PMID:cooccur
6356CCL11SCYA11C-C motif chemokine ligand 1117q12CV:PGCnp
PMID:cooccur
6348CCL3G0S19-1 | LD78ALPHA | MIP-1-alpha | MIP1A | SCYA3C-C motif chemokine ligand 317q12PMID:cooccur
2535FZD2Fz2 | fz-2 | fzE2 | hFz2frizzled class receptor 217q21.31CV:PGCnp
DMG:Jaffe_2016
140735DYNLL2DNCL1B | Dlc2 | RSPH22dynein light chain LC8-type 217q22CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
124540MSI2MSI2Hmusashi RNA binding protein 217q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3959LGALS3BP90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90lectin, galactoside-binding, soluble, 3 binding protein17q25CV:PGCnp
DMG:vanEijk_2014
9021SOCS3ATOD4 | CIS3 | Cish3 | SOCS-3 | SSI-3 | SSI3suppressor of cytokine signaling 317q25.3CV:PGCnp
PMID:cooccur
162655ZNF519HsT2362zinc finger protein 51918p11.21CV:PGCnp
DMG:Jaffe_2016
84617TUBB6HsT1601 | TUBB-5tubulin beta 6 class V18p11.21CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_TAP-PSD-95-CORE
1149CIDEACIDE-Acell death-inducing DFFA-like effector a18p11.21|18CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
114876OSBPL1AORP-1 | ORP1 | OSBPL1Boxysterol binding protein like 1A18q11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1000CDH2CD325 | CDHN | CDw325 | NCADcadherin 218q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Ascano FMRP targets
Potential synaptic genes
25925ZNF521EHZF | Evi3zinc finger protein 52118q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Darnell FMRP targets
Ascano FMRP targets
4092SMAD7CRCS3 | MADH7 | MADH8SMAD family member 718q21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
10365KLF2LKLFKruppel-like factor 219p13.11CV:PGCnp
PMID:cooccur
9592IER2ETR101immediate early response 219p13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
3383ICAM1BB2 | CD54 | P3.58intercellular adhesion molecule 119p13.2CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:McCarthy_2014
3726JUNBAP-1jun B proto-oncogene19p13.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3727JUNDAP-1jun D proto-oncogene19p13.2CV:PGCnp
PMID:cooccur
4784NFIXMRSHSS | NF1A | SOTOS2nuclear factor I/X (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
10148EBI3IL-27B | IL27BEpstein-Barr virus induced 319p13.3CV:PGCnp
DMG:Wockner_2014
6324SCN1BATFB13 | BRGDA5 | GEFSP1sodium voltage-gated channel beta subunit 119q13.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
EXCITABILITY
29950SERTAD1SEI1 | TRIP-Br1SERTA domain containing 119q13.1-q13.2DMG:Nishioka_2013
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
1628DBPDABPD site of albumin promoter (albumin D-box) binding protein19q13.3CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
2354FOSBAP-1 | G0S3 | GOS3 | GOSBFBJ murine osteosarcoma viral oncogene homolog B19q13.32CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
5971RELBI-REL | IREL | REL-Bv-rel avian reticuloendotheliosis viral oncogene homolog B19q13.32CV:PGCnp
GO_Annotation
Network
53635PTOV1ACID2 | PTOV-1prostate tumor overexpressed 119q13.33CV:PGCnp
DMG:vanEijk_2014
6237RRAS-related RAS viral (r-ras) oncogene homolog19q13.33CV:PGCnp
DMG:Wockner_2014
5178PEG3PW1 | ZKSCAN22 | ZNF904 | ZSCAN24paternally expressed 319q13.4CV:PGCnpCompositeSet
Darnell FMRP targets
91663MYADMSB135myeloid-associated differentiation marker19q13.42DMG:vanEijk_2014
845CASQ2PDIB2calsequestrin 21p13.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
1301COL11A1CO11A1 | COLL6 | STL2collagen type XI alpha 11p21CV:GWASdb
CV:PGCnp
255231MCOLN2TRP-ML2 | TRPML2mucolipin 21p22CV:PGCnp
2152F3CD142 | TF | TFAcoagulation factor III, tissue factor1p22-p21CV:PGCnp
PMID:cooccur
2633GBP1-guanylate binding protein 11p22.2CV:PGCnp
PMID:cooccur
23566LPAR3EDG7 | Edg-7 | GPCR | HOFNH30 | LP-A3 | LPA3 | RP4-678I3lysophosphatidic acid receptor 31p22.3CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
GO_Annotation
CompositeSet
5567PRKACBPKA C-beta | PKACBprotein kinase cAMP-activated catalytic subunit beta1p31.1CV:PGCnp
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11080DNAJB4DNAJW | DjB4 | HLJ1DnaJ heat shock protein family (Hsp40) member B41p31.1CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
CompositeSet
10561IFI44MTAP44 | TLDC5 | p44interferon induced protein 441p31.1CV:PGCnp
GSMA_IIA
5733PTGER3EP3 | EP3-I | EP3-II | EP3-III | EP3-IV | EP3-VI | EP3e | PGE2-Rprostaglandin E receptor 31p31.2CV:PGCnp
GSMA_IIA
PMID:cooccur
85440DOCK7EIEE23 | ZIR2dedicator of cytokinesis 71p31.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
2882GPX7CL683 | GPX6 | GPx-7 | GSHPx-7 | NPGPxglutathione peroxidase 71p32CV:PGCnp
DMG:Jaffe_2016
6886TAL1SCL | TCL5 | bHLHa17 | tal-1T-cell acute lymphocytic leukemia 11p32CV:PGCnp
PMID:cooccur
23499MACF1ABP620 | ACF7 | MACF | OFC4microtubule-actin crosslinking factor 11p32-p31CV:GWASdb
CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9202ZMYM4CDIR | MYM | ZNF198L3 | ZNF262zinc finger MYM-type containing 41p32-p34CV:PGCnp
CV:PheWAS
3716JAK1JAK1A | JAK1B | JTK3Janus kinase 11p32.3-p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4352MPLC-MPL | CD110 | MPLV | THCYT2 | TPORMPL proto-oncogene, thrombopoietin receptor1p34CV:PGCnp
Expression
PMID:cooccur
7075TIE1JTK14 | TIEtyrosine kinase with immunoglobulin like and EGF like domains 11p34-p33CV:PGCnp
GO_Annotation
27285TEKT2TEKTB1 | TEKTIN-T | h-tektin-ttektin 21p34.3CV:PGCnp
GO_Annotation
54206ERRFI1GENE-33 | MIG-6 | MIG6 | RALTERBB receptor feedback inhibitor 11p36CV:PGCnp
DMG:Nishioka_2013
11123RCAN3DSCR1L2 | MCIP3 | RCN3 | hRCN3RCAN family member 31p36.11CV:PGCnp
23569PADI4PAD | PAD4 | PADI5 | PDI4 | PDI5peptidyl arginine deiminase, type IV1p36.13CV:GWASdb
CV:PGCnp
PMID:cooccur
148479PHF13PHF5 | SPOC1PHD finger protein 131p36.31CV:PGCnp
6497SKISGS | SKVSKI proto-oncogene1p36.33CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
1805DPTTRAMPdermatopontin1q12-q23CV:PGCnp
PMID:cooccur
6277S100A62A9 | 5B10 | CABP | CACY | PRAS100 calcium binding protein A61q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
55870ASH1LASH1 | ASH1L1 | KMT2Hash1 (absent, small, or homeotic)-like (Drosophila)1q22CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
5087PBX1-pre-B-cell leukemia homeobox 11q23CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
8490RGS5MST092 | MST106 | MST129 | MSTP032 | MSTP092 | MSTP106 | MSTP129regulator of G-protein signaling 51q23.1CV:PGCnp
GSMA_IIA
Network
PMID:cooccur
51744CD2442B4 | NAIL | NKR2B4 | Nmrk | SLAMF4CD244 molecule1q23.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
5999RGS4RGP4 | SCZD9regulator of G-protein signaling 41q23.3Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
GSMA_IIA
Network
PMID:cooccur
Potential synaptic genes
9019MPZL1MPZL1b | PZR | PZR1b | PZRa | PZRbmyelin protein zero like 11q24.2Association
CV:PGCnp
PMID:cooccur
460ASTN1ASTNastrotactin 11q25.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5743PTGS2COX-2 | COX2 | GRIPGHS | PGG/HS | PGHS-2 | PHS-2 | hCox-2prostaglandin-endoperoxide synthase 21q25.2-q25.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2752GLULGLNS | GS | PIG43 | PIG59glutamate-ammonia ligase1q31CV:PGCnp
Expression
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
947CD34-CD34 molecule1q32CV:GWASdb
CV:PGCnp
PMID:cooccur
7832BTG2PC3 | TIS21BTG family member 21q32CV:PGCnp
PMID:cooccur
254428SLC41A1MgtEsolute carrier family 41 member 11q32.1CV:GWASdb
CV:PGCnp
5362PLXNA2OCT | PLXN2plexin A21q32.2Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
89796NAV1POMFIL3 | STEERIN1 | UNC53H1neuron navigator 11q32.3CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
467ATF3-activating transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3776KCNK2K2p2.1 | TPKC1 | TREK | TREK-1 | TREK1 | hTREK-1c | hTREK-1epotassium two pore domain channel subfamily K member 21q41CV:PGCnp
DMG:Jaffe_2016
Expression
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
4811NID1NIDnidogen 11q43CV:GWASdb
CV:PGCnp
6262RYR2ARVC2 | ARVD2 | RYR-2 | RyR | VTSIPryanodine receptor 21q43CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6238RRBP1ES/130 | ES130 | RRp | hESribosome binding protein 120p12CV:PGCnp
Expression
GSMA_I
RNA AND PROTEIN SYNTHESIS
Ascano FMRP targets
57761TRIB3C20orf97 | NIPK | SINK | SKIP3 | TRB3tribbles pseudokinase 320p13-p12.2CV:PGCnp
Network
PMID:cooccur
1789DNMT3BICF | ICF1 | M.HsaIIIBDNA (cytosine-5-)-methyltransferase 3 beta20q11.2CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
10544PROCRCCCA | CCD41 | EPCRprotein C receptor20q11.2CV:PGCnp
60436TGIF2-TGFB induced factor homeobox 220q11.23CV:PGCnp
DMG:Wockner_2014
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
958CD40Bp50 | CDW40 | TNFRSF5 | p50CD40 molecule20q12-q13.2CV:GWASdb
CV:PGCnp
PMID:cooccur
2139EYA2EAB1EYA transcriptional coactivator and phosphatase 220q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3172HNF4AFRTS4 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | HNF4alpha | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14hepatocyte nuclear factor 4 alpha20q13.12CV:PGCnp
GO_Annotation
PMID:cooccur
55861DBNDD2C20orf35 | CK1BP | HSMNP1dysbindin (dystrobrevin binding protein 1) domain containing 220q13.12DEG:Sanders_2013
50861STMN3SCLIPstathmin 320q13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
1522CTSZCTSXcathepsin Z20q13.32CV:PGCnp
DMG:vanEijk_2014
8204NRIP1RIP140nuclear receptor interacting protein 121q11.2CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
10950BTG3ANA | TOB5 | TOB55 | TOFABTG family member 321q21.1CV:PGCnp
DMG:Jaffe_2016
4685NCAM2NCAM21neural cell adhesion molecule 221q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9510ADAMTS1C3-C5 | METH1ADAM metallopeptidase with thrombospondin type 1 motif 121q21.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
351APPAAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2amyloid beta precursor protein21q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6453ITSN1ITSN | SH3D1A | SH3P17intersectin 121q22.1-q22.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2897GRIK1EAA3 | EEA3 | GLR5 | GLUR5 | GluK1 | gluR-5glutamate ionotropic receptor kainate type subunit 121q22.11CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
571BACH1BACH-1 | BTBD24BTB and CNC homology 1, basic leucine zipper transcription factor 121q22.11CV:PGCnp
DMG:Jaffe_2016
7267TTC3DCRR1 | RNF105 | TPRDIIItetratricopeptide repeat domain 321q22.2CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2114ETS2ETS2IT1ETS proto-oncogene 2, transcription factor21q22.2CV:PGCnp
DEG:Zhao_2015
874CBR3HEL-S-25 | SDR21C2 | hCBR3carbonyl reductase 321q22.2CV:PGCnpCompositeSet
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
754PTTG1IPC21orf1 | C21orf3 | PBFpituitary tumor-transforming 1 interacting protein21q22.3DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
1312COMTHEL-S-98ncatechol-O-methyltransferase22q11.21Association
CNV:YES
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
DOPAMINE
6899TBX1CAFS | CATCH22 | CTHM | DGCR | DGS | DORV | TBX1C | TGA | VCF | VCFST-box 122q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
23331TTC28TPRBKtetratricopeptide repeat domain 2822q12.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
339665SLC35E4-solute carrier family 35 member E422q12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8508NIPSNAP1-nipsnap homolog 1 (C. elegans)22q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
7078TIMP3HSMRK222 | K222 | K222TA2 | SFDTIMP metallopeptidase inhibitor 322q12.3Association
CV:PGCnp
GSMA_I
11015KDELR3ERD2L3KDEL endoplasmic reticulum protein retention receptor 322q13.1CV:PGCnp
DMG:Nishioka_2013
23467NPTXRNPRneuronal pentraxin receptor22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Potential synaptic genes
85358SHANK3DEL22q13.3 | PROSAP2 | PSAP2 | SCZD15 | SPANK-2SH3 and multiple ankyrin repeat domains 322q13.3CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3625INHBB-inhibin beta B2cen-q13CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
26056RAB11FIP5GAF1 | RIP11 | pp75RAB11 family interacting protein 5 (class I)2p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
4211MEIS1-Meis homeobox 12p14CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
51232CRIM1CRIM-1 | S52cysteine rich transmembrane BMP regulator 1 (chordin-like)2p21CV:PGCnp
GO_Annotation
23433RHOQARHQ | HEL-S-42 | RASL7A | TC10 | TC10Aras homolog family member Q2p21CV:PGCnp
5581PRKCEPKCE | nPKC-epsilonprotein kinase C epsilon2p21CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6546SLC8A1NCX1solute carrier family 8 member A12p22.1CV:GWASdb
CV:PGCnp
ION BALANCE
CompositeSet
Darnell FMRP targets
1545CYP1B1CP1B | CYPIB1 | GLC3A | P4501B1cytochrome P450 family 1 subfamily B member 12p22.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
388RHOBARH6 | ARHB | MST081 | MSTP081 | RHOH6ras homolog family member B2p24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
6382SDC1CD138 | SDC | SYND1 | syndecansyndecan 12p24.1CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
4613MYCNMODED | N-myc | NMYC | ODED | bHLHe37v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog2p24.3CV:PGCnp
DMG:Jaffe_2016
7837PXDNCOPOA | D2S448 | D2S448E | MG50 | PRG2 | PXN | VPOperoxidasin2p25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
23175LPIN1PAP1lipin 12p25.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
1844DUSP2PAC-1 | PAC1dual specificity phosphatase 22q11CV:PGCnp
GSMA_I
PMID:cooccur
8809IL18R1CD218a | CDw218a | IL-1Rrp | IL18RA | IL1RRPinterleukin 18 receptor 12q12Association
CV:PGCnp
Expression
GR_WM
GSMA_I
PMID:cooccur
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
3553IL1BIL-1 | IL1-BETA | IL1F2interleukin 1 beta2q14Association
Core
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
Network
PMID:cooccur
4929NR4A2HZF-3 | NOT | NURR1 | RNR1 | TINURnuclear receptor subfamily 4 group A member 22q22-q23Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
PMID:cooccur
7130TNFAIP6TSG-6 | TSG6TNF alpha induced protein 62q23.3CV:PGCnp
GSMA_IIA
10716TBR1TBR-1 | TES-56T-box, brain 12q24CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
64135IFIH1AGS7 | Hlcd | IDDM19 | MDA-5 | MDA5 | RLR-2 | SGMRT1interferon induced, with helicase C domain 12q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
4065LY75CD205 | CLEC13B | DEC-205 | GP200-MR6 | LY-75lymphocyte antigen 752q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
51661FKBP7FKBP23 | PPIaseFK506 binding protein 72q31.2DMG:Nishioka_2013
10787NCKAP1HEM2 | NAP1 | NAP125 | p125Nap1NCK associated protein 12q32CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6775STAT4SLEB11signal transducer and activator of transcription 42q32.2-q32.3CV:PGCnp
9262STK17BDRAK2serine/threonine kinase 17b2q32.3CV:PGCnp
1195CLK1CLK | CLK/STY | STYCDC like kinase 12q33CV:PGCnp
57683ZDBF2-zinc finger DBF-type containing 22q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
4133MAP2MAP2A | MAP2B | MAP2Cmicrotubule associated protein 22q34-q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
81618ITM2CBRI3 | BRICD2C | E25 | E25C | ITM3integral membrane protein 2C2q37CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
9208LRRFIP1FLAP-1 | FLAP1 | FLIIAP1 | GCF-2 | GCF2 | HUFI-1 | TRIPleucine rich repeat (in FLII) interacting protein 12q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
6091ROBO1DUTT1 | SAX3roundabout guidance receptor 13p12CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Ascano FMRP targets
4286MITFCMM8 | MI | WS2 | WS2A | bHLHe32microphthalmia-associated transcription factor3p13CV:PGCnp
PMID:cooccur
27086FOXP112CC4 | HSPC215 | MFH | QRF1 | hFKH1Bforkhead box P13p14.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
2317FLNBABP-278 | ABP-280 | AOI | FH1 | FLN-B | FLN1L | LRS1 | SCT | TABP | TAPfilamin B3p14.3Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
7474WNT5AhWNT5Awingless-type MMTV integration site family member 5A3p21-p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
9254CACNA2D2CACNA2Dcalcium voltage-gated channel auxiliary subunit alpha2delta 23p21.3CV:PGCnp
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1951CELSR3ADGRC3 | CDHF11 | EGFL1 | FMI1 | HFMI1 | MEGF2 | RESDA1cadherin EGF LAG seven-pass G-type receptor 33p21.31CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
84276NICN1-nicolin 13p21.31CV:PGCnp
6769STACSTAC1SH3 and cysteine rich domain3p22.3CV:PGCnp
GSMA_I
152189CMTM8CKLFSF8 | CKLFSF8-V2CKLF like MARVEL transmembrane domain containing 83p22.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
79885HDAC11HD11histone deacetylase 113p25.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
6533SLC6A6TAUTsolute carrier family 6 member 63p25.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_I
CELL METABOLISM
2199FBLN2-fibulin 23p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
8553BHLHE40BHLHB2 | DEC1 | HLHB2 | SHARP-2 | STRA13 | Stra14basic helix-loop-helix family member e403p26CV:PGCnp
PMID:cooccur
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
29114TAGLN3NP22 | NP24 | NP25transgelin 33q13.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_IIA
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
26137ZBTB20DPZF | HOF | ODA-8S | PRIMS | ZNF288zinc finger and BTB domain containing 203q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
56667MUC13DRCC1 | MUC-13mucin 13, cell surface associated3q21.2CV:PGCnp
3693ITGB5-integrin subunit beta 53q21.2CV:PGCnp
Network
2624GATA2DCML | IMD21 | MONOMAC | NFE1BGATA binding protein 23q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
PMID:cooccur
5947RBP1CRABP-I | CRBP | CRBP1 | CRBPI | RBPCretinol binding protein 13q23Association
PMID:cooccur
5217PFN2D3S1319E | PFLprofilin 23q25.1NetworkSTRUCTURAL PLASTICITY
CompositeSet
285313IGSF10CMF608immunoglobulin superfamily member 103q25.1CV:GWASdb
CV:PGCnp
54165DCUN1D1DCNL1 | DCUN1L1 | RP42 | SCCRO | SCRO | Tes3defective in cullin neddylation 1 domain containing 13q26.3CV:PGCnp
DMG:Wockner_2014
2049EPHB3ETK2 | HEK2 | TYRO6EPH receptor B33q27.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
1608DGKGDAGK3 | DGK-GAMMAdiacylglycerol kinase gamma3q27.2-q27.3CV:GWASdb
CV:PGCnp
4026LPP-LIM domain containing preferred translocation partner in lipoma3q28CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
22998LIMCH1LIMCH1A | LMO7BLIM and calponin homology domains 14p13CV:GWASdb
CV:PGCnp
7358UGDHGDH | UDP-GlcDH | UDPGDH | UGDUDP-glucose 6-dehydrogenase4p15.1DMG:Wockner_2014
PMID:cooccur
57537SORCS2-sortilin related VPS10 domain containing receptor 24p16.1CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GO_Annotation
3490IGFBP7AGM | FSTL2 | IBP-7 | IGFBP-7 | IGFBP-7v | IGFBPRP1 | MAC25 | PSF | RAMSVPS | TAFinsulin like growth factor binding protein 74q12CV:PGCnp
DMG:Wockner_2014
3815KITC-Kit | CD117 | PBT | SCFRKIT proto-oncogene receptor tyrosine kinase4q12CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
2044EPHA5CEK7 | EHK-1 | EHK1 | EK7 | HEK7 | TYRO4EPH receptor A54q13.1CV:PGCnp
CV:PheWAS
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
8633UNC5CUNC5H3unc-5 netrin receptor C4q21-q23CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
8987STBD1GENEX3414 | GENX-3414starch binding domain 14q21.1CV:PGCnp
2798GNRHRGNRHR1 | GRHR | HH7 | LHRHR | LRHRgonadotropin releasing hormone receptor4q21.2CV:PGCnp
118429ANTXR2CMG-2 | CMG2 | HFS | ISH | JHFanthrax toxin receptor 24q21.21CV:GWAScat
CV:PGCnp
9429ABCG2ABC15 | ABCP | BCRP | BCRP1 | BMDP | CD338 | CDw338 | EST157481 | GOUT1 | MRX | MXR | MXR-1 | MXR1 | UAQTL1ATP binding cassette subfamily G member 2 (Junior blood group)4q22CV:PGCnp
DMG:Jaffe_2016
5311PKD2APKD2 | PC2 | PKD4 | Pc-2 | TRPP2polycystin 2, transient receptor potential cation channel4q22.1CV:PGCnp
CV:PheWAS
133308SLC9B2NHA2 | NHE10 | NHEDC2solute carrier family 9 member B24q24CV:PGCnp
64116SLC39A8BIGM103 | CDG2N | LZT-Hs6 | PP3105 | ZIP8solute carrier family 39 member 84q24CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
27071DAPP1BAM32dual adaptor of phosphotyrosine and 3-phosphoinositides4q25-q27CV:PGCnp
11107PRDM5BCS2 | PFM2PR domain 54q27CV:PGCnp
DMG:Wockner_2014
4086SMAD1BSP-1 | BSP1 | JV4-1 | JV41 | MADH1 | MADR1SMAD family member 14q31CV:PGCnp
GO_Annotation
4887NPY2RNPY2-Rneuropeptide Y receptor Y24q31CV:PGCnp
PMID:cooccur
2891GRIA2GLUR2 | GLURB | GluA2 | GluR-K2 | HBGR2glutamate ionotropic receptor AMPA type subunit 24q32.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
8001GLRA3-glycine receptor alpha 34q34.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
1601DAB2DOC-2 | DOC2Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)5p13.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
26064RAI14NORPEG | RAI13retinoic acid induced 145p13.3-p13.2CV:PGCnp
DNM:McCarthy_2014
Network
56172ANKHANK | CCAL2 | CMDJ | CPPDD | HANK | MANKANKH inorganic pyrophosphate transport regulator5p15.1CV:PGCnp
DMG:Nishioka_2013
10409BASP1CAP-23 | CAP23 | NAP-22 | NAP22brain abundant membrane attached signal protein 15p15.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
57491AHRRAHH | AHHR | bHLHe77aryl-hydrocarbon receptor repressor5p15.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
133418EMBGP70embigin5q11.1CV:PGCnp
10769PLK2SNK | hPlk2 | hSNKpolo like kinase 25q12.1-q13.2CV:PGCnp
7060THBS4TSP-4 | TSP4thrombospondin 45q13CV:PGCnp
PMID:cooccur
116068LYSMD3-LysM domain containing 35q14.3CV:PGCnp
DMG:Jaffe_2016
22936ELL2-elongation factor for RNA polymerase II 25q15CV:PGCnp
DMG:Wockner_2014
Expression
1839HBEGFDTR | DTS | DTSF | HEGFLheparin binding EGF like growth factor5q23CV:PGCnp
GSMA_I
5480PPICCYPCpeptidylprolyl isomerase C5q23.2CV:PGCnp
PMID:cooccur
6558SLC12A2BSC | BSC2 | NKCC1 | PPP1R141solute carrier family 12 member 25q23.3CV:PGCnp
GSMA_I
PMID:cooccur
2246FGF1AFGF | ECGF | ECGF-beta | ECGFA | ECGFB | FGF-1 | FGF-alpha | FGFA | GLIO703 | HBGF-1 | HBGF1fibroblast growth factor 15q31Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
NEUROTROPHIN SIGNALING
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
154ADRB2ADRB2R | ADRBR | B2AR | BAR | BETA2ARadrenoceptor beta 25q31-q32CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
GPCR SIGNALLING
1437CSF2GMCSFcolony stimulating factor 25q31.1CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
51523CXXC5CF5 | HSPC195 | RINF | WIDCXXC finger protein 55q31.2CV:PGCnp
GSMA_I
11346SYNPO-synaptopodin5q33.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6793STK10LOK | PRO2729serine/threonine kinase 105q35.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
7021TFAP2BAP-2B | AP2-Btranscription factor AP-2 beta (activating enhancer binding protein 2 beta)6p12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
3108HLA-DMAD6S222E | DMA | HLADM | RING6major histocompatibility complex, class II, DM alpha6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
170954PPP1R18HKMT1098 | KIAA1949protein phosphatase 1 regulatory subunit 186p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8870IER3DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1immediate early response 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3304HSPA1BHSP70-1B | HSP70-2 | HSP70.2heat shock protein family A (Hsp70) member 1B6p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
29993PACSIN1SDPIprotein kinase C and casein kinase substrate in neurons 16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Potential synaptic genes
7940LST1B144 | D6S49E | LST-1leukocyte specific transcript 16p21.3CV:PGCnp
GO_Annotation
GSMA_I
4050LTBTNFC | TNFSF3 | TNLG1C | p33lymphotoxin beta6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
2550GABBR1GABABR1 | GABBR1-3 | GB1 | GPRC3Agamma-aminobutyric acid type B receptor subunit 16p21.31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
6659SOX4EVI16SRY-box 46p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
3400ID4IDB4 | bHLHb27inhibitor of DNA binding 4, HLH protein6p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
4739NEDD9CAS-L | CAS2 | CASL | CASS2 | HEF1neural precursor cell expressed, developmentally down-regulated 96p24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
2296FOXC1ARA | FKHL7 | FREAC-3 | FREAC3 | IGDA | IHG1 | IRID1 | RIEG3forkhead box C16p25CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
94234FOXQ1HFH1forkhead box Q16p25CV:PGCnp
GSMA_I
PMID:cooccur
10957PNRC1B4-2 | PNAS-145 | PROL2 | PRR2proline rich nuclear receptor coactivator 16q15CV:GWASdb
CV:PGCnp
2569GABRR1-gamma-aminobutyric acid type A receptor rho1 subunit6q15CV:PGCnp
GO_Annotation
PMID:cooccur
2045EPHA7EHK-3 | EHK3 | EK11 | HEK11EPH receptor A76q16.1CV:GWASdb
CV:PGCnp
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
27244SESN1PA26 | SEST1sestrin 16q21CV:PGCnp
4121MAN1A1HUMM3 | HUMM9 | MAN9mannosidase alpha class 1A member 16q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
7164TPD52L1D53tumor protein D52-like 16q22-q23CV:PGCnp
DMG:Wockner_2014
4082MARCKS80K-L | MACS | PKCSL | PRKCSLmyristoylated alanine rich protein kinase C substrate6q22.2CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
5796PTPRKR-PTP-kappaprotein tyrosine phosphatase, receptor type K6q22.2-q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2697GJA1AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCAgap junction protein alpha 16q22.31CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
26002MOXD1MOX | PRO5780 | dJ248E1.1monooxygenase, DBH-like 16q23.2CV:PGCnp
DEG:Sanders_2013
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
9053MAP7E-MAP-115 | EMAP115microtubule associated protein 76q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23328SASH1SH3D6A | dJ323M4 | dJ323M4.1SAM and SH3 domain containing 16q24.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3482IGF2RCD222 | CI-M6PR | CIMPR | M6P-R | M6P/IGF2R | MPR 300 | MPR1 | MPR300 | MPRIinsulin like growth factor 2 receptor6q26CV:PGCnp
DMG:Montano_2016
PMID:cooccur
Ascano FMRP targets
11328FKBP9FKBP60 | FKBP63 | PPIaseFK506 binding protein 97p11.1CV:PGCnp
DMG:Wockner_2014
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
816CAMK2BCAM2 | CAMK2 | CAMKBcalcium/calmodulin-dependent protein kinase II beta7p14.3-p14.1CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3205HOXA9ABD-B | HOX1 | HOX1.7 | HOX1Ghomeobox A97p15.2DMG:Wockner_2014
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
3569IL6BSF-2 | BSF2 | CDF | HGF | HSF | IFN-beta-2 | IFNB2 | IL-6interleukin 67p21CV:GWASdb
CV:PGCnp
PMID:cooccur
5154PDGFAPDGF-A | PDGF1platelet derived growth factor subunit A7p22DMG:Jaffe_2016
Expression
9863MAGI2ACVRIP1 | AIP-1 | AIP1 | ARIP1 | MAGI-2 | SSCAMmembrane associated guanylate kinase, WW and PDZ domain containing 27q21Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
781CACNA2D1CACNA2 | CACNL2A | CCHL2A | LINC01112 | lncRNA-N3calcium voltage-gated channel auxiliary subunit alpha2delta 17q21-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6863TAC1Hs.2563 | NK2 | NKNA | NPK | TAC2tachykinin precursor 17q21-q22CV:PGCnp
GO_Annotation
PMID:cooccur
9723SEMA3EM-SEMAH | M-SemaK | SEMAH | coll-5semaphorin 3E7q21.11CV:GWASdb
CV:PGCnp
GO_Annotation
27445PCLOACZ | PCH3piccolo presynaptic cytomatrix protein7q21.11CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
8910SGCEDYT11 | ESGsarcoglycan epsilon7q21.3CV:PGCnp
55607PPP1R9ANRB1 | NRBI | Neurabin-Iprotein phosphatase 1 regulatory subunit 9A7q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
2050EPHB4HTK | MYK1 | TYRO11EPH receptor B47q22CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
5649RELNETL7 | LIS2 | PRO1598 | RLreelin7q22Association
Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
3751KCND2KV4.2 | RK5potassium voltage-gated channel subfamily D member 27q31CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
EXCITABILITY
CompositeSet
Darnell FMRP targets
4897NRCAM-neuronal cell adhesion molecule7q31CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
857CAV1BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21caveolin 17q31.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
29969MDFICHICMyoD family inhibitor domain containing7q31.1-q31.2CV:PGCnp
PMID:cooccur
26136TESTESS | TESS-2testin LIM domain protein7q31.2CV:PGCnp
PMID:cooccur
4189DNAJB9ERdj4 | MDG-1 | MDG1 | MST049 | MSTP049DnaJ heat shock protein family (Hsp40) member B97q31|14q24.2-q24.3CV:PGCnp
5764PTNHARP | HBGF8 | HBNF | NEGF1pleiotrophin7q33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Potential synaptic genes
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
373156GSTK1GST | GST 13-13 | GST13 | GST13-13 | GSTK1-1 | hGSTK1glutathione S-transferase kappa 17q34CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
1052CEBPDC/EBP-delta | CELF | CRP3 | NF-IL6-betaCCAAT/enhancer binding protein delta8p11.2-p11.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
11030RBPMSHERMESRNA binding protein with multiple splicing8p12CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
8822FGF17FGF-13 | FGF-17 | HH20fibroblast growth factor 178p21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
64236PDLIM2MYSTIQUE | SLIMPDZ and LIM domain 28p21.3GSMA_I
GSMA_IIA
GSMA_IIE
10395DLC1ARHGAP7 | HP | STARD12 | p122-RhoGAPDLC1 Rho GTPase activating protein8p22CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9639ARHGEF10GEF10 | SNCVRho guanine nucleotide exchange factor 108p23Association
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
7274TTPAATTP | AVED | TTP1 | alphaTTPtocopherol (alpha) transfer protein8q12.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
2669GEMKIRGTP binding protein overexpressed in skeletal muscle8q13-q21CV:PGCnp
PMID:cooccur
5569PKIAPRKACN1protein kinase (cAMP-dependent, catalytic) inhibitor alpha8q21.12CV:PGCnp
PMID:cooccur
9420CYP7B1CBAS3 | CP7B | SPG5Acytochrome P450 family 7 subfamily B member 18q21.3CV:GWASdb
CV:PGCnp
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
4982TNFRSF11BOCIF | OPG | PDB5 | TR1tumor necrosis factor receptor superfamily member 11b8q24CV:PGCnp
CV:PheWAS
10656KHDRBS3Etle | SALP | SLM-2 | SLM2 | T-STAR | TSTAR | etoileKH domain containing, RNA binding, signal transduction associated 38q24.2CV:PGCnp
DMG:Wockner_2014
7016TESK1-testis-specific kinase 19p13CV:PGCnp
DMG:vanEijk_2014
7010TEKCD202B | TIE-2 | TIE2 | VMCM | VMCM1TEK receptor tyrosine kinase9p21CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
4300MLLT3AF9 | YEATS3myeloid/lymphoid or mixed-lineage leukemia; translocated to, 39p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
6595SMARCA2BAF190 | BRM | NCBRS | SNF2 | SNF2L2 | SNF2LA | SWI2 | Sth1p | hBRM | hSNF2aSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 29p22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
8777MPDZHYC2 | MUPP1multiple PDZ domain crumbs cell polarity complex component9p23CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
Ascano FMRP targets
6505SLC1A1DCBXA | EAAC1 | EAAT3 | SCZD18solute carrier family 1 member 19p24CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
7436VLDLRCAMRQ1 | CARMQ1 | CHRMQ1 | VLDLRCHvery low density lipoprotein receptor9p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
4781NFIBCTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3nuclear factor I/B9p24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
2776GNAQCMC1 | G-ALPHA-q | GAQ | SWSG protein subunit alpha q9q21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.human_mGluR5
G2Cdb.humanPSP
Potential synaptic genes
80318GKAP1FKSG21 | GKAP42G kinase anchoring protein 19q21.32CV:PGCnp
7088TLE1ESG | ESG1 | GRG1transducin like enhancer of split 19q21.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
27130INVSINV | NPH2 | NPHP2inversin9q31CV:PGCnp
DMG:Jaffe_2016
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
54566EPB41L4BCG1 | EHM2erythrocyte membrane protein band 4.1 like 4B9q31-q32CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
19ABCA1ABC-1 | ABC1 | CERP | HDLDT1 | TGDATP binding cassette subfamily A member 19q31.1CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
1757SARDHBPR-2 | DMGDHL1 | SAR | SARD | SDHsarcosine dehydrogenase9q33-q34CV:PGCnp
DMG:Wockner_2014
Expression
7185TRAF1EBI6 | MGC:10353TNF receptor associated factor 19q33-q34CV:PGCnp
PMID:cooccur
22954TRIM32BBS11 | HT2A | LGMD2H | TATIPtripartite motif containing 329q33.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
153090DAB2IPAF9Q34 | AIP-1 | AIP1 | DIP1/2DAB2 interacting protein9q33.1-q33.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5090PBX3-pre-B-cell leukemia homeobox 39q33.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
25ABL1ABL | JTK7 | bcr/abl | c-ABL | c-ABL1 | p150 | v-ablABL proto-oncogene 1, non-receptor tyrosine kinase9q34.1CV:PGCnp
Network
Ascano FMRP targets
6812STXBP1MUNC18-1 | NSEC1 | P67 | RBSEC1 | UNC18syntaxin binding protein 19q34.1CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2022ENGEND | HHT1 | ORW1endoglin9q34.11CV:PGCnp
PMID:cooccur
56262LRRC8AAGM5 | LRRC8 | SWELL1leucine-rich repeat containing 8 family member A9q34.11CV:PGCnp
1756DMDBMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85dystrophinXp21.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
1438CSF2RACD116 | CDw116 | CSF2R | CSF2RAX | CSF2RAY | CSF2RX | CSF2RY | GM-CSF-R-alpha | GMCSFR | GMR | SMDP4colony stimulating factor 2 receptor alpha subunitXp22.32 and Yp11.3Association
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
4478MSNHEL70moesinXq11.1GO_Annotation
Network
PMID:cooccur
CompositeSet
Potential synaptic genes
1741DLG3MRX | MRX90 | NEDLG | PPP1R82 | SAP102 | XLMRdiscs large homolog 3Xq13.1CV:PGCnp
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
7105TSPAN6T245 | TM4SF6 | TSPAN-6tetraspanin 6Xq22CV:PGCnp
56271BEX4BEXL1brain expressed X-linked 4Xq22.1-q22.3CV:PGCnp
DEG:Sanders_2013
Potential synaptic genes
55859BEX1BEX2 | HBEX2 | HGR74-hbrain expressed X-linked 1Xq22.1|Xq22CV:PGCnp
DEG:Zhao_2015
GO_Annotation
Potential synaptic genes
203447NRKNESKNik related kinaseXq22.3CV:PGCnp
Expression
PMID:cooccur
5358PLS3BMND18 | T-plastinplastin 3Xq23CV:PGCnp
DMG:Nishioka_2013
3358HTR2C5-HT1C | 5-HT2C | 5-HTR2C | 5HTR2C | HTR1C5-hydroxytryptamine receptor 2CXq24ADT:Sun_2012
Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
2892GRIA3GLUR-C | GLUR-K3 | GLUR3 | GLURC | GluA3 | MRX94glutamate ionotropic receptor AMPA type subunit 3Xq25Association
CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
2556GABRA3-gamma-aminobutyric acid type A receptor alpha3 subunitXq28CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
393ARHGAP4C1 | RGC1 | RhoGAP4 | SrGAP4 | p115Rho GTPase activating protein 4Xq28CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
3897L1CAMCAML1 | CD171 | HSAS | HSAS1 | MASA | MIC5 | N-CAM-L1 | N-CAML1 | NCAM-L1 | S10 | SPG1L1 cell adhesion moleculeXq28Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
10838ZNF275-zinc finger protein 275Xq28CV:PGCnp
DMG:vanEijk_2014