Gene Page: RAB11FIP5

Summary ?
GeneID26056
SymbolRAB11FIP5
SynonymsGAF1|RIP11|pp75
DescriptionRAB11 family interacting protein 5 (class I)
ReferenceMIM:605536|HGNC:HGNC:24845|Ensembl:ENSG00000135631|HPRD:16117|Vega:OTTHUMG00000129779
Gene typeprotein-coding
Map location2p13
Pascal p-value1.115E-5
Sherlock p-value0.97
eGeneMyers' cis & trans
SupportG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs6720094chr273588075RAB11FIP5260560.03cis
rs7574291chr273594940RAB11FIP5260560.12cis
rs7598396chr273652627RAB11FIP5260560.05cis
rs1083922chr273704002RAB11FIP5260560.07cis
rs7607014chr273730173RAB11FIP5260560.06cis
rs7598660chr273740424RAB11FIP5260560.03cis
rs11688718chr273760938RAB11FIP5260560.18cis
rs13391552chr273818935RAB11FIP5260560.1cis
rs6710438chr273820107RAB11FIP5260560.09cis
rs4852316chr273919657RAB11FIP5260560.1cis
rs12624267chr273986930RAB11FIP5260560.16cis
rs17013209chr1208925928RAB11FIP5260560.19trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
KEGG ENDOCYTOSIS 183132All SZGR 2.0 genes in this pathway
CHIARADONNA NEOPLASTIC TRANSFORMATION KRAS DN 14295All SZGR 2.0 genes in this pathway
CHEBOTAEV GR TARGETS UP 7762All SZGR 2.0 genes in this pathway
GRAESSMANN APOPTOSIS BY DOXORUBICIN UP 1142669All SZGR 2.0 genes in this pathway
GRAESSMANN RESPONSE TO MC AND DOXORUBICIN UP 612367All SZGR 2.0 genes in this pathway
MOREAUX MULTIPLE MYELOMA BY TACI UP 412249All SZGR 2.0 genes in this pathway
REN ALVEOLAR RHABDOMYOSARCOMA DN 408274All SZGR 2.0 genes in this pathway
BURTON ADIPOGENESIS PEAK AT 0HR 6348All SZGR 2.0 genes in this pathway
MASSARWEH TAMOXIFEN RESISTANCE UP 578341All SZGR 2.0 genes in this pathway
MOOTHA PGC 420269All SZGR 2.0 genes in this pathway
CHEN METABOLIC SYNDROM NETWORK 1210725All SZGR 2.0 genes in this pathway
WONG ADULT TISSUE STEM MODULE 721492All SZGR 2.0 genes in this pathway
CHYLA CBFA2T3 TARGETS UP 387225All SZGR 2.0 genes in this pathway
LINSLEY MIR16 TARGETS 206127All SZGR 2.0 genes in this pathway
KRIEG HYPOXIA NOT VIA KDM3A 770480All SZGR 2.0 genes in this pathway