Search results: The pahtway p3486 has 578 genes in the original annotation. Currently, there are 341 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
56952PRTFDC1HHGPphosphoribosyl transferase domain containing 110p12.1CV:PGCnp
PMID:cooccur
25805BAMBINMABMP and activin membrane-bound inhibitor10p12.3-p11.2CV:PGCnp
57713SFMBT2-Scm-like with four mbt domains 210p14CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
100287932TIMM23TIM23translocase of inner mitochondrial membrane 2310q11.23DMG:Nishioka_2013
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
310ANXA7ANX7 | SNX | SYNEXINannexin A710q22.2PMID:cooccur
3778KCNMA1BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1potassium calcium-activated channel subfamily M alpha 110q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
29760BLNKAGM4 | BASH | BLNK-S | LY57 | SLP-65 | SLP65 | bcaB-cell linker10q23.2-q23.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
118932ANKRD22-ankyrin repeat domain 2210q23.31CV:PGCnp
DNM:Fromer_2014
CompositeSet
355FASALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6Fas cell surface death receptor10q24.1CV:PGCnp
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
56889TM9SF3EP70-P-iso | SMBPtransmembrane 9 superfamily member 310q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
22978NT5C2GMP | NT5B | PNT5 | SPG45 | SPG65 | cN-II5'-nucleotidase, cytosolic II10q24.32CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
57700FAM160B1KIAA1600 | bA106M7.3family with sequence similarity 160 member B110q25.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
7511XPNPEP1APP1 | SAMP | XPNPEP | XPNPEPL | XPNPEPL1X-prolyl aminopeptidase (aminopeptidase P) 1, soluble10q25.3CV:PGCnp
DMG:Jaffe_2016
DNM:McCarthy_2014
Ascano FMRP targets
3632INPP5A5PTASEinositol polyphosphate-5-phosphatase A10q26.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
CompositeSet
5795PTPRJCD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1protein tyrosine phosphatase, receptor type J11p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
406ARNTLBMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5aryl hydrocarbon receptor nuclear translocator like11p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
144100PLEKHA7-pleckstrin homology domain containing A711p15.1CV:PGCnpAscano FMRP targets
8495PPFIBP2Cclp1PPFIA binding protein 211p15.4CV:GWASdb
CV:PGCnp
PROTEIN CLUSTERING
6609SMPD1ASM | ASMASE | NPDsphingomyelin phosphodiesterase 111p15.4-p15.1ADT:Sun_2012
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1500CTNND1CAS | CTNND | P120CAS | P120CTN | p120 | p120(CAS) | p120(CTN)catenin delta 111q11CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9066SYT7IPCA-7 | IPCA7 | PCANAP7 | SYT-VII | SYTVIIsynaptotagmin 711q12.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
408ARRB1ARB1 | ARR1arrestin, beta 111q13CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
9600PITPNM1DRES9 | NIR2 | PITPNM | RDGB | RDGB1 | RDGBA | RDGBA1 | Rd9phosphatidylinositol transfer protein membrane associated 111q13CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
DNM:Xu_2012
GO_Annotation
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
22941SHANK2AUTS17 | CORTBP1 | CTTNBP1 | ProSAP1 | SHANK | SPANK-3SH3 and multiple ankyrin repeat domains 211q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5029P2RY2HP2U | P2RU1 | P2U | P2U1 | P2UR | P2Y2 | P2Y2Rpurinergic receptor P2Y211q13.4CV:PGCnp
DNM:Xu_2012
GPCR SIGNALLING
CompositeSet
8322FZD4CD344 | EVR1 | FEVR | FZD4S | Fz-4 | Fz4 | FzE4 | GPCR | hFz4frizzled class receptor 411q14.2CV:PGCnp
DMG:Wockner_2014
143684FAM76B-family with sequence similarity 76 member B11q21CV:PGCnp
143888KDELC2-KDEL motif containing 211q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Guipponi_2014
GSMA_I
25996REXO2CGI-114 | REX2 | RFN | SFNRNA exonuclease 211q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
196264MPZL3-myelin protein zero like 311q23.3CV:PGCnp
GSMA_I
10205MPZL2EVA | EVA1myelin protein zero like 211q24CV:PGCnp
GSMA_I
23012STK38LNDR2serine/threonine kinase 38 like12p11.23CV:PGCnp
DNM:Fromer_2014
CompositeSet
51026GOLT1BCGI-141 | GCT2 | GOT1 | GOT1B | YMR292Wgolgi transport 1B12p12.1CV:PGCnp
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
79887PLBD1-phospholipase B domain containing 112p13.1CV:PGCnp
4891SLC11A2DCT1 | DMT1 | NRAMP2solute carrier family 11 member 212q13CV:PGCnp
PMID:cooccur
3887KRT81HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1keratin 8112q13CV:PGCnp
51474LIMA1EPLIN | SREBP3LIM domain and actin binding 112q13CV:PGCnp
DMG:Wockner_2014
3855KRT7CK7 | K2C7 | K7 | SCLkeratin 712q13.13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3229HOXC13ECTD9 | HOX3 | HOX3Ghomeobox C1312q13.3CV:PGCnp
DMG:Jaffe_2016
11163NUDT4DIPP2 | DIPP2alpha | DIPP2beta | HDCMB47Pnudix hydrolase 412q21CV:PGCnp
64786TBC1D15RAB7-GAPTBC1 domain family member 1512q21.1CV:GWASdb
CV:PGCnp
490ATP2B1PMCA1 | PMCA1kbATPase plasma membrane Ca2+ transporting 112q21.3CV:PGCnp
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7334UBE2NHEL-S-71 | UBC13 | UBCHBEN; UBC13 | UbcH-ben | UbcH13ubiquitin conjugating enzyme E2 N12q22CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
7296TXNRD1GRIM-12 | TR | TR1 | TRXR1 | TXNRthioredoxin reductase 112q23.3CV:PGCnp
84102SLC41A2SLC41A1-L1solute carrier family 41 member 212q23.3CV:GWASdb
CV:PGCnp
11108PRDM4PFM1PR domain 412q23.3CV:GWASdb
CV:PGCnp
51228GLTP-glycolipid transfer protein12q24.11CV:PGCnp
54621VSIG10-V-set and immunoglobulin domain containing 1012q24.23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
54509RHOFARHF | RIFras homolog family member F (in filopodia)12q24.31CV:PGCnp
DMG:Wockner_2014
55743CHFRRNF116 | RNF196checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase12q24.33CV:PGCnp
26524LATS2KPMlarge tumor suppressor kinase 213q12.11DMG:Wockner_2014Ascano FMRP targets
11278KLF12AP-2rep | AP2REP | HSPC122Kruppel-like factor 1213q22CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
CompositeSet
55757UGGT2HUGT2 | UGCGL2 | UGT2UDP-glucose glycoprotein glucosyltransferase 213q32.1CV:PGCnp
55647RAB20-RAB20, member RAS oncogene family13q34CV:GWASdb
CV:PGCnp
3183HNRNPCC1 | C2 | HNRNP | HNRPC | SNRPCheterogeneous nuclear ribonucleoprotein C (C1/C2)14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
Potential synaptic genes
1073CFL2NEM7cofilin 214q12CV:GWASdb
CV:PGCnp
10979FERMT2KIND2 | MIG2 | PLEKHC1 | UNC112 | UNC112B | mig-2fermitin family member 214q22.1CV:PGCnp
DMG:Wockner_2014
Expression
51528JKAMPC14orf100 | CDA06 | HSPC213 | HSPC327 | JAMPJNK1/MAPK8-associated membrane protein14q23.1CV:PGCnp
Expression
5663PSEN1AD3 | FAD | PS-1 | PS1 | S182presenilin 114q24.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
64207IRF2BPLC14orf4 | EAP1interferon regulatory factor 2 binding protein-like14q24.3CV:PGCnp
DMG:Jaffe_2016
91833WDR20DMRWD repeat domain 2014q32.31CV:PGCnp
DMG:Wockner_2014
55778ZNF839C14orf131zinc finger protein 83914q32.31CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
4016LOXL1LOL | LOXLlysyl oxidase like 115q22CV:PGCnp
CV:PheWAS
114294LACTBG24 | MRPL56lactamase beta15q22.1CV:PGCnp
83660TLN2ILWEQtalin 215q22.2CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
585BBS4-Bardet-Biedl syndrome 415q22.3-q23CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
4205MEF2AADCAD1 | RSRFC4 | RSRFC9 | mef2myocyte enhancer factor 2A15q26CV:PGCnp
PMID:cooccur
3418IDH2D2HGA2 | ICD-M | IDH | IDHM | IDP | IDPM | mNADP-IDHisocitrate dehydrogenase 2 (NADP+), mitochondrial15q26.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
220ALDH1A3ALDH1A6 | ALDH6 | MCOP8 | RALDH3aldehyde dehydrogenase 1 family member A315q26.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1428CRYMDFNA40 | THBPcrystallin mu16p12.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
STRUCTURAL PLASTICITY
CompositeSet
368ABCC6ABC34 | ARA | EST349056 | GACI2 | MLP1 | MOAT-E | MOATE | MRP6 | PXE | PXE1 | URG7ATP binding cassette subfamily C member 616p13.1CNV:YES
CV:GWASdb
CV:PGCnp
GSMA_IIE
PMID:cooccur
23042PDXDC1LP8165pyridoxal-dependent decarboxylase domain containing 116p13.11CV:PGCnp
GSMA_IIE
Ascano FMRP targets
729993SHISA9CKAMP44shisa family member 916p13.12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIE
197335WDR90C16orf15 | C16orf16 | C16orf17 | C16orf18 | C16orf19WD repeat domain 9016p13.3CV:PGCnp
PMID:cooccur
114990VASNSLITL2vasorin16p13.3CV:PGCnp
DMG:Wockner_2014
1540CYLDBRSS | CDMT | CYLD1 | CYLDI | EAC | MFT | MFT1 | SBS | TEM | USPL2CYLD lysine 63 deubiquitinase16q12.1CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
64400AKTIPFT1 | FTSAKT interacting protein16q12.2CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
1009CDH11CAD11 | CDHOB | OB | OSF-4cadherin 1116q21CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
79567FAM65A-family with sequence similarity 65 member A16q22.1CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
9764KIAA0513-KIAA051316q24.1CV:PGCnp
PMID:cooccur
8139GANGAN1 | KLHL16gigaxonin16q24.1CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
51655RASD1AGS1 | DEXRAS1 | MGC:26290RAS, dexamethasone-induced 117p11.2CV:PGCnp
DMG:Nishioka_2013
Network
5376PMP22CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110peripheral myelin protein 2217p12CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
23108RAP1GAP2GARNL4 | RAP1GA3RAP1 GTPase activating protein 217p13.3CV:PGCnp
DMG:Montano_2016
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9618TRAF4CART1 | MLN62 | RNF83TNF receptor associated factor 417q11-q12CV:PGCnp
PMID:cooccur
1362CPDGP180carboxypeptidase D17q11.2CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
147007TMEM199C17orf32 | CDG2P | VMA12 | VPH2transmembrane protein 19917q11.2CV:GWASdb
2064ERBB2CD340 | HER-2 | HER-2/neu | HER2 | MLN 19 | NEU | NGL | TKR1erb-b2 receptor tyrosine kinase 217q12CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Ascano FMRP targets
94103ORMDL3-ORMDL sphingolipid biosynthesis regulator 317q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
31ACACAACAC | ACACAD | ACC | ACC1 | ACCAacetyl-CoA carboxylase alpha17q21CNV:YES
CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
7473WNT3INT4 | TETAMSwingless-type MMTV integration site family member 317q21CV:PGCnp
PMID:cooccur
10614HEXIM1CLP1 | EDG1 | HIS1 | MAQ1hexamethylene bis-acetamide inducible 117q21.31CV:PGCnp
DMG:Jaffe_2016
51226COPZ2zeta2-COPcoatomer protein complex subunit zeta 217q21.32CV:PGCnp
DMG:Jaffe_2016
3212HOXB2HOX2 | HOX2H | Hox-2.8 | K8homeobox B217q21.32CV:PGCnp
DMG:Wockner_2014
55040EPN3-epsin 317q21.33CV:PGCnp
DMG:Wockner_2014
58488PCTPPC-TP | STARD2phosphatidylcholine transfer protein17q22CV:PGCnp
DMG:Nishioka_2013
1534CYB561CYB561A1 | FRRS2cytochrome b56117q23.3CV:PGCnp
DMG:Wockner_2014
55062WIPI1ATG18 | ATG18A | WIPI49WD repeat domain, phosphoinositide interacting 117q24.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
79092CARD14BIMP2 | CARMA2 | PRP | PSORS2 | PSS1caspase recruitment domain family member 1417q25CV:PGCnp
DMG:Montano_2016
7077TIMP2CSC-21K | DDC8TIMP metallopeptidase inhibitor 217q25CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
GO_Annotation
Network
PMID:cooccur
10458BAIAP2BAP2 | FLAF3 | IRSP53BAI1 associated protein 217q25CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
57045TWSG1TSGtwisted gastrulation BMP signaling modulator 118p11.3CV:PGCnp
GO_Annotation
81035COLEC12CLP1 | NSR2 | SCARA4 | SRCLcollectin subfamily member 1218p11.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9331B4GALT6B4Gal-T6 | beta4Gal-T6UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 618q11CV:PGCnp
PMID:cooccur
9050PSTPIP2MAYPproline-serine-threonine phosphatase interacting protein 218q12|tdb7990CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
5874RAB27BC25KGRAB27B, member RAS oncogene family18q21.2CV:PGCnpEXOCYTOSIS
57153SLC44A2CTL2 | PP1292solute carrier family 44 member 219p13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
80131LRRC8E-leucine-rich repeat containing 8 family member E19p13.2CV:PGCnp
DMG:Wockner_2014
4784NFIXMRSHSS | NF1A | SOTOS2nuclear factor I/X (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
898CCNE1CCNE | pCCNE1cyclin E119q12CV:PGCnp
DMG:Montano_2016
Network
2867FFAR2FFA2R | GPR43free fatty acid receptor 219q13.1CV:PGCnp
DMG:Wockner_2014
6324SCN1BATFB13 | BRGDA5 | GEFSP1sodium voltage-gated channel beta subunit 119q13.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
EXCITABILITY
4680CEACAM6CD66c | CEAL | NCAcarcinoembryonic antigen related cell adhesion molecule 619q13.2CV:PGCnp
PMID:cooccur
4059BCAMAU | CD239 | LU | MSK19basal cell adhesion molecule (Lutheran blood group)19q13.2DMG:Wockner_2014
2906GRIN2DEB11 | GluN2D | NMDAR2D | NR2Dglutamate ionotropic receptor NMDA type subunit 2D19q13.33Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
90874ZNF697-zinc finger protein 6971p12CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
5738PTGFRNCD315 | CD9P-1 | EWI-F | FPRP | SMAP-6prostaglandin F2 receptor inhibitor1p13.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
163259DENND2CdJ1156J9.1DENN domain containing 2C1p13.2CV:PGCnp
GSMA_I
GSMA_IIA
388650FAM69A-family with sequence similarity 69 member A1p22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
374986FAM73AMIGA1family with sequence similarity 73 member A1p31.1CV:PGCnp
GSMA_IIA
79971WLSC1orf139 | EVI | GPR177 | MRP | mig-14wntless Wnt ligand secretion mediator1p31.3CV:PGCnp
GSMA_IIA
PMID:cooccur
4774NFIACTF | NF-I/A | NF1-A | NFI-A | NFI-Lnuclear factor I/A1p31.3-p31.2CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
2517FUCA1FUCAfucosidase, alpha-L- 1, tissue1p34CV:PGCnp
DMG:Wockner_2014
8503PIK3R3p55 | p55-GAMMA | p55PIKphosphoinositide-3-kinase regulatory subunit 31p34.1CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
55223TRIM62DEAR1tripartite motif containing 621p35.1CV:PGCnp
DMG:Wockner_2014
23673STX12STX13 | STX14syntaxin 121p35.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
64744SMAP2SMAP1Lsmall ArfGAP21p35.3-p34.1CV:PGCnp
DNM:Xu_2012
CompositeSet
6920TCEA3TFIIS | TFIIS.Htranscription elongation factor A31p36.12CV:GWASdb
CV:PGCnp
57185NIPAL3DJ462O23.2 | NPAL3NIPA like domain containing 31p36.12-p35.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
388591RNF207C1orf188ring finger protein 2071p36.31CV:PGCnp
128077LIX1L-limb and CNS expressed 1 like1q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
56957OTUD7BCEZANNE | ZA20D1OTU deubiquitinase 7B1q21.2CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
5087PBX1-pre-B-cell leukemia homeobox 11q23CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
84134TOMM40LTOMM40Btranslocase of outer mitochondrial membrane 40 like1q23.3CV:PGCnp
GSMA_IIA
Ascano FMRP targets
25903OLFML2B-olfactomedin like 2B1q23.3CV:GWASdb
CV:PGCnp
GSMA_IIA
26052DNM3Dyna IIIdynamin 31q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
116496FAM129AC1orf24 | GIG39 | NIBANfamily with sequence similarity 129 member A1q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
1604CD55CR | CROM | DAF | TCCD55 molecule (Cromer blood group)1q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
4179CD46AHUS2 | MCP | MIC10 | TLX | TRA2.10CD46 molecule1q32CV:PGCnp
PMID:cooccur
7188TRAF5MGC:39780 | RNF84TNF receptor associated factor 51q32CV:PGCnp
DMG:Wockner_2014
83593RASSF5Maxp1 | NORE1 | NORE1A | NORE1B | RAPL | RASSF3Ras association domain family member 51q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
4139MARK1MARK | Par-1c | Par1cmicrotubule affinity regulating kinase 11q41CV:PGCnp
PMID:cooccur
375056MIA3ARNT | D320 | TANGO | TANGO1 | UNQ6077melanoma inhibitory activity family member 31q41CV:PGCnp
DMG:Jaffe_2016
26750RPS6KC1RPK118 | RSKL1 | S6K-delta-1 | S6PKh1 | humS6PKh1ribosomal protein S6 kinase C11q41CV:GWASdb
CV:PGCnp
29097CNIH4CNIH-4 | HSPC163cornichon family AMPA receptor auxiliary protein 41q42.11CV:PGCnp
Expression
4931NVLNVL2nuclear VCP-like1q42.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
80232WDR26CDW2 | GID7 | MIP2WD repeat domain 261q42.13CV:PGCnp
DMG:Jaffe_2016
54453RIN2MACS | RASSF4Ras and Rab interactor 220p11.22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
83959SLC4A11BTR1 | CDPD1 | CHED2 | NABC1 | dJ794I6.2solute carrier family 4 member 1120p12CV:PGCnp
DMG:Wockner_2014
182JAG1AGS | AHD | AWS | CD339 | HJ1 | JAGL1jagged 120p12.1-p11.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
PMID:cooccur
Ascano FMRP targets
57761TRIB3C20orf97 | NIPK | SINK | SKIP3 | TRB3tribbles pseudokinase 320p13-p12.2CV:PGCnp
Network
PMID:cooccur
58476TP53INP2C20orf110 | DOR | PINH | dJ1181N3.1tumor protein p53 inducible nuclear protein 220q11.22CV:PGCnp
DMG:vanEijk_2014
2139EYA2EAB1EYA transcriptional coactivator and phosphatase 220q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
57468SLC12A5EIEE34 | EIG14 | KCC2 | hKCC2solute carrier family 12 member 520q13.12CV:PGCnp
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
57580PREX1P-REX1phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 120q13.13CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
8537BCAS1AIBC1 | NABC1breast carcinoma amplified sequence 120q13.2CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5753PTK6BRKprotein tyrosine kinase 620q13.3CV:PGCnp
11083DIDO1BYE1 | C20orf158 | DATF-1 | DATF1 | DIDO2 | DIDO3 | DIO-1 | DIO1 | dJ885L7.8death inducer-obliterator 120q13.33CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
10950BTG3ANA | TOB5 | TOB55 | TOFABTG family member 321q21.1CV:PGCnp
DMG:Jaffe_2016
757TMEM50BC21orf4 | HCVP7TP3transmembrane protein 50B21q22.11CV:PGCnp
DMG:vanEijk_2014
1827RCAN1ADAPT78 | CSP1 | DSC1 | DSCR1 | MCIP1 | RCN1regulator of calcineurin 121q22.12CV:PGCnp
GO_Annotation
PMID:cooccur
873CBR1CBR | SDR21C1 | hCBR1carbonyl reductase 121q22.13DEG:Zhao_2015
Network
CompositeSet
8867SYNJ1INPP5G | PARK20synaptojanin 121q22.2CV:PGCnp
GO_Annotation
Network
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
84677DSCR8C21orf65 | CT25.1a | CT25.1b | MMA-1 | MMA-1a | MMA-1b | MMA1 | MTAG2Down syndrome critical region 821q22.2CV:PGCnp
5625PRODHHSPOX2 | PIG6 | POX | PRODH1 | PRODH2 | TP53I6proline dehydrogenase (oxidase) 122q11.21Association
CNV:YES
Core
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
9342SNAP29CEDNIK | SNAP-29synaptosome associated protein 29kDa22q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
GSMA_I
PMID:cooccur
EXOCYTOSIS
3985LIMK2-LIM domain kinase 222q12.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
253190SERHL2dJ222E13.1serine hydrolase-like 222q13DMG:Wockner_2014
4151MBPVALB | myoglobginmyoglobin22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
11015KDELR3ERD2L3KDEL endoplasmic reticulum protein retention receptor 322q13.1CV:PGCnp
DMG:Nishioka_2013
1454CSNK1ECKIepsilon | HCKIEcasein kinase 1 epsilon22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
758MPPED1239AB | C22orf1 | FAM1Ametallophosphoesterase domain containing 122q13.31CV:PGCnp
64781CERKLK4 | dA59H18.2 | dA59H18.3 | hCERKceramide kinase22q13.31CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Expression
CompositeSet
3625INHBB-inhibin beta B2cen-q13CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
7844RNF103HKF-1 | KF-1 | KF1 | ZFP-103 | ZFP103ring finger protein 1032p11.2CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GO_Annotation
GSMA_I
26056RAB11FIP5GAF1 | RIP11 | pp75RAB11 family interacting protein 5 (class I)2p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2673GFPT1CMS12 | CMSTA1 | GFA | GFAT | GFAT 1 | GFAT1 | GFAT1m | GFPT | GFPT1L | MSLGglutamine--fructose-6-phosphate transaminase 12p13CV:PGCnp
GO_Annotation
Ascano FMRP targets
2034EPAS1ECYT4 | HIF2A | HLF | MOP2 | PASD2 | bHLHe73endothelial PAS domain protein 12p21-p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
64080RBKSRBSKribokinase2p23.3CV:PGCnp
DMG:Wockner_2014
9475ROCK2ROCK-IIRho associated coiled-coil containing protein kinase 22p24CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6382SDC1CD138 | SDC | SYND1 | syndecansyndecan 12p24.1CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
Network
151354FAM84ANSE1 | PP11517family with sequence similarity 84 member A2p24.3DMG:Wockner_2014
91543RSAD22510004L01Rik | cig33 | cig5 | vig1radical S-adenosyl methionine domain containing 22p25.2CV:PGCnp
11138TBC1D8AD3 | GRAMD8 | HBLP1 | TBC1D8A | VRPTBC1 domain family member 82q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
11320MGAT4AGNT-IV | GNT-IVA | GnT-4amannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A2q12CV:PGCnp
GSMA_I
PMID:cooccur
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
84910TMEM87B-transmembrane protein 87B2q13CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
CompositeSet
6574SLC20A1GLVR1 | Glvr-1 | PIT1 | PiT-1solute carrier family 20 member 12q13CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
92ACVR2AACTRII | ACVR2activin A receptor type 2A2q22.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
90ACVR1ACTRI | ACVR1A | ACVRLK2 | ALK2 | FOP | SKR1 | TSRIactivin A receptor type 12q23-q24CV:PGCnp
GSMA_IIA
PMID:cooccur
56475RPRMREPRIMOreprimo, TP53 dependent G2 arrest mediator candidate2q23.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_IIA
2591GALNT3GalNAc-T3 | HFTC | HHSpolypeptide N-acetylgalactosaminyltransferase 32q24-q31CV:PGCnp
GSMA_IIA
5937RBMS1C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1RNA binding motif, single stranded interacting protein 12q24.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
22837COBLL1COBLR1cordon-bleu WH2 repeat protein like 12q24.3CV:GWASdb
CV:PGCnp
GSMA_IIA
10787NCKAP1HEM2 | NAP1 | NAP125 | p125Nap1NCK associated protein 12q32CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1745DLX1-distal-less homeobox 12q32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
165215FAM171BKIAA1946family with sequence similarity 171 member B2q32.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
54842MFSD6MMR2 | hMMR2major facilitator superfamily domain containing 62q32.2CV:PGCnp
129450TYW5C2orf60 | hTYW5tRNA-yW synthesizing protein 52q33.1CV:PGCnp
LK:YES
151195CCNYL1-cyclin Y like 12q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
3417IDH1HEL-216 | HEL-S-26 | IDCD | IDH | IDP | IDPC | PICDisocitrate dehydrogenase 1 (NADP+)2q33.3CV:PGCnp
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL METABOLISM
Chromatin Remodeling Genes
2066ERBB4ALS19 | HER4 | p180erbB4erb-b2 receptor tyrosine kinase 42q33.3-q34Association
Core
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
Potential synaptic genes
51719CAB39CGI-66 | MO25calcium binding protein 392q37.1CV:PGCnp
DMG:Wockner_2014
23677SH3BP4BOG25 | TTPSH3-domain binding protein 42q37.1-q37.2CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
100130449PP14571-uncharacterized LOC1001304492q37.3CV:PGCnp
DMG:Wockner_2014
166336PRICKLE2EPM5prickle planar cell polarity protein 23p14.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
1605DAG1156DAG | A3a | AGRNR | DAG | MDDGA9 | MDDGC7 | MDDGC9dystroglycan 13p21CV:PGCnp
DMG:Jaffe_2016
6988TCTA-T-cell leukemia translocation altered3p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
22906TRAK1MILT1 | OIP106trafficking protein, kinesin binding 13p22.1CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
23180RFTN1MIG2 | PIB10 | PIG9 | RAFTLINraftlin, lipid raft linker 13p24.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
Ascano FMRP targets
285368PRRT3-proline rich transmembrane protein 33p25.3DMG:Jaffe_2016
131544CRYBG3DKFZp667G2110 | vlAKAPcrystallin beta-gamma domain containing 33q11.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
CompositeSet
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
55081IFT57ESRRBL1 | HIPPI | MHS4R2intraflagellar transport 573q13.13CV:PGCnp
GSMA_IIA
GSMA_IIE
2624GATA2DCML | IMD21 | MONOMAC | NFE1BGATA binding protein 23q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
PMID:cooccur
29970SCHIP1SCHIP-1schwannomin interacting protein 13q25.32-q25.33CV:PGCnp
DMG:Wockner_2014
8743TNFSF10APO2L | Apo-2L | CD253 | TL2 | TNLG6A | TRAILtumor necrosis factor superfamily member 103q26CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
6498SKILSNO | SnoA | SnoI | SnoNSKI-like proto-oncogene3q26CV:PGCnp
Network
PMID:cooccur
5337PLD1-phospholipase D13q26CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
151742PPM1LPP2C-epsilon | PP2CE | PPM1-LIKEprotein phosphatase, Mg2+/Mn2+ dependent 1L3q26.1CV:PGCnp
26996GPR160GPCR1 | GPCR150G protein-coupled receptor 1603q26.2-q27CV:PGCnp
57552NCEH1AADACL1 | NCEHneutral cholesterol ester hydrolase 13q26.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
604BCL6BCL5 | BCL6A | LAZ3 | ZBTB27 | ZNF51B-cell CLL/lymphoma 63q27CV:PGCnp
DMG:Jaffe_2016
8893EIF2B5CACH | CLE | EIF-2B | EIF2Bepsilon | LVWMeukaryotic translation initiation factor 2B subunit epsilon3q27.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
285382C3orf70-chromosome 3 open reading frame 703q27.2CV:PGCnp
DMG:Wockner_2014
22998LIMCH1LIMCH1A | LMO7BLIM and calponin homology domains 14p13CV:GWASdb
CV:PGCnp
116984ARAP2CENTD1 | PARXArfGAP with RhoGAP domain, ankyrin repeat and PH domain 24p14CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
55300PI4K2BPI4KIIB | PIK42Bphosphatidylinositol 4-kinase type 2 beta4p15.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
91050CCDC149-coiled-coil domain containing 1494p15.2CV:PGCnp
6286S100PMIG9S100 calcium binding protein P4p16CV:PGCnp
DMG:Jaffe_2016
4043LRPAP1A2MRAP | A2RAP | HBP44 | MRAP | MYP23 | RAP | alpha-2-MRAPLDL receptor related protein associated protein 14p16.3CV:PGCnp
PMID:cooccur
65997RASL11B-RAS like family 11 member B4q12CV:PGCnp
DMG:Wockner_2014
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
84708LNX1LNX | MPDZ | PDZRN2ligand of numb-protein X 1, E3 ubiquitin protein ligase4q12CV:PGCnp
DMG:Wockner_2014
25849PARM1Cipar1 | DKFZP564O0823 | PARM-1 | WSC4prostate androgen-regulated mucin-like protein 14q13.3-q21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
5783PTPN13FAP-1 | PNP1 | PTP-BAS | PTP-BL | PTP1E | PTPL1 | PTPLE | hPTP1Eprotein tyrosine phosphatase, non-receptor type 134q21.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
57563KLHL8-kelch like family member 84q22.1CV:PGCnp
DMG:Wockner_2014
10144FAM13AARHGAP48 | FAM13A1family with sequence similarity 13 member A4q22.1CV:GWAScat
CV:PGCnp
CV:PheWAS
Ascano FMRP targets
166929SGMS2SMS2sphingomyelin synthase 24q25CV:PGCnp
5308PITX2ARP1 | Brx1 | IDG2 | IGDS | IGDS2 | IHG2 | IRID2 | Otlx2 | PTX2 | RGS | RIEG | RIEG1 | RSpaired like homeodomain 24q25CV:PGCnp
PMID:cooccur
2549GAB1-GRB2 associated binding protein 14q31.21CV:PGCnp
8821INPP4B-inositol polyphosphate-4-phosphatase type II B4q31.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
166785MMAAcblAmethylmalonic aciduria (cobalamin deficiency) cblA type4q31.21CV:PGCnp
PMID:cooccur
152485ZNF827-zinc finger protein 8274q31.22CV:PGCnp
DMG:vanEijk_2014
Darnell FMRP targets
23240KIAA0922TMEM131LKIAA09224q31.3CV:GWASdb
CV:PGCnp
Ascano FMRP targets
56034PDGFCFALLOTEIN | SCDGFplatelet derived growth factor C4q32CV:PGCnp
DMG:Jaffe_2016
1519CTSOCTSO1cathepsin O4q32.1CV:PGCnp
9693RAPGEF2CNrasGEF | NRAPGEP | PDZ-GEF1 | PDZGEF1 | RA-GEF | RA-GEF-1 | Rap-GEP | nRap GEPRap guanine nucleotide exchange factor 24q32.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9848MFAP3LNYD-sp9microfibrillar associated protein 3 like4q32.3CV:PGCnp
PMID:cooccur
1182CLCN3CLC3 | ClC-3chloride voltage-gated channel 34q33CV:GWAScat
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
253260RICTORAVO3 | PIA | hAVO3RPTOR independent companion of MTOR, complex 25p13.1CV:PGCnp
PMID:cooccur
23037PDZD2AIPC | PAPIN | PDZK3 | PIN1PDZ domain containing 25p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
54545MTMR123-PAP | PIP3APmyotubularin related protein 125p13.3CV:PGCnp
PMID:cooccur
5144PDE4DACRDYS2 | DPDE3 | HSPDE4D | PDE43 | PDE4DN2 | STRK1phosphodiesterase 4D5q12CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
8507ENC1CCL28 | ENC-1 | KLHL35 | KLHL37 | NRPB | PIG10 | TP53I10ectodermal-neural cortex 15q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
7060THBS4TSP-4 | TSP4thrombospondin 45q13CV:PGCnp
PMID:cooccur
10184LHFPL2-lipoma HMGIC fusion partner-like 25q14.1CV:PGCnp
DMG:Wockner_2014
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
22936ELL2-elongation factor for RNA polymerase II 25q15CV:PGCnp
DMG:Wockner_2014
Expression
64097EPB41L4AEPB41L4 | NBL4erythrocyte membrane protein band 4.1 like 4A5q21.3CV:GWASdb
CV:PGCnp
4015LOX-lysyl oxidase5q23.2DMG:Wockner_2014
PMID:cooccur
6558SLC12A2BSC | BSC2 | NKCC1 | PPP1R141solute carrier family 12 member 25q23.3CV:PGCnp
GSMA_I
PMID:cooccur
51128SAR1BANDD | CMRD | GTBPB | SARA2secretion associated Ras related GTPase 1B5q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
81555YIPF5FinGER5 | SB140 | SMAP-5 | SMAP5 | YIP1AYip1 domain family member 55q31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
64411ARAP3CENTD3 | DRAG1ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 35q31.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
23286WWC1HBEBP3 | HBEBP36 | KIBRA | MEMRYQTL | PPP1R168WW and C2 domain containing 15q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1879EBF1COE1 | EBF | O/E-1 | OLF1early B-cell factor 15q34CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
55227LRRC1LANO | dJ523E19.1leucine rich repeat containing 16p12.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GSMA_IIE
8870IER3DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1immediate early response 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
780DDR1CAK | CD167 | DDR | EDDR1 | HGK2 | MCK10 | NEP | NTRK4 | PTK3 | PTK3A | RTK6 | TRKEdiscoidin domain receptor tyrosine kinase 16p21.3Association
CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
3006HIST1H1CH1.2 | H1C | H1F2 | H1s-1histone cluster 1, H1c6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
29993PACSIN1SDPIprotein kinase C and casein kinase substrate in neurons 16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Potential synaptic genes
8705B3GALT4BETA3GALT4 | GALT2 | GALT4Beta-1,3-galactosyltransferase 46p21.3GSMA_I
5696PSMB8ALDD | D6S216 | D6S216E | JMP | LMP7 | NKJO | PSMB5i | RING10proteasome subunit beta 86p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
8347HIST1H2BCH2B.1 | H2B/l | H2BFL | dJ221C16.3histone cluster 1, H2bc6p22.1CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
81688C6orf62Nbla00237 | XTP12 | dJ30M3.2chromosome 6 open reading frame 626p22.3CV:PGCnp
GSMA_I
255488RNF144BIBRDC2 | PIR2 | bA528A10.3 | p53RFPring finger protein 144B6p22.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
1906EDN1ARCND3 | ET1 | HDLCQ7 | PPET1 | QMEendothelin 16p24.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
10690FUT9Fuc-TIXfucosyltransferase 9 (alpha (1,3) fucosyltransferase)6q16CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
8763CD164DFNA66 | MGC-24 | MUC-24 | endolynCD164 molecule6q21CV:PGCnp
DMG:Jaffe_2016
84456L3MBTL3MBT-1 | MBT1l(3)mbt-like 3 (Drosophila)6q23CV:PGCnp
DMG:Jaffe_2016
2037EPB41L24.1-G | 4.1Gerythrocyte membrane protein band 4.1-like 26q23CV:PGCnp
Network
STRUCTURAL PLASTICITY
7402UTRNDMDL | DRP | DRP1utrophin6q24CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
23328SASH1SH3D6A | dJ323M4 | dJ323M4.1SAM and SH3 domain containing 16q24.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
445347TARPCD3G | TCRG | TCRGC1 | TCRGC2 | TCRGVTCR gamma alternate reading frame protein7p15-p14CV:PGCnp
PMID:cooccur
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
54468MIOS-missing oocyte, meiosis regulator, homolog (Drosophila)7p21.3CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
PMID:cooccur
113263GLCCI1FAM117C | GCTR | GIG18 | TSSN1glucocorticoid induced 17p21.3CV:PGCnp
DMG:Wockner_2014
3382ICA1ICA69 | ICAp69islet cell autoantigen 17p22CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
11014KDELR2ELP-1 | ERD2.2KDEL endoplasmic reticulum protein retention receptor 27p22.1CV:PGCnp
DMG:Jaffe_2016
2768GNA12NNX3 | RMP | gepG protein subunit alpha 127p22.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G-PROTEIN RELAY
Ascano FMRP targets
56975FAM20CDMP-4 | DMP4 | GEF-CK | RNSfamily with sequence similarity 20 member C7p22.3CV:PGCnp
DMG:Wockner_2014
948CD36BDPLT10 | CHDS7 | FAT | GP3B | GP4 | GPIV | PASIV | SCARB3CD36 molecule7q11.2CV:GWASdb
CV:PGCnp
PMID:cooccur
1021CDK6MCPH12 | PLSTIREcyclin-dependent kinase 67q21-q22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
55973BCAP29BAP29B-cell receptor-associated protein 297q22.3CV:PGCnp
DMG:Jaffe_2016
858CAV2CAVcaveolin 27q31.1CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
93664CADPS2-Ca2+ dependent secretion activator 27q31.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
Potential synaptic genes
6867TACC1Ga55transforming acidic coiled-coil containing protein 18p11.22CV:PGCnp
DMG:Wockner_2014
51435SCARA3APC7 | CSR | CSR1 | MSLR1 | MSRL1scavenger receptor class A member 38p21CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
80005DOCK5-dedicator of cytokinesis 58p21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
57509MTUS1ATBP | ATIP | ICIS | MP44 | MTSG1microtubule associated tumor suppressor 18p22CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
9788MTSS1MIM | MIMA | MIMBmetastasis suppressor 18p22CV:GWASdb
CV:PGCnp
GO_Annotation
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
23471TRAM1PNAS8 | TRAM | TRAMPtranslocation associated membrane protein 18q13.3CV:PGCnp
DMG:Wockner_2014
5569PKIAPRKACN1protein kinase (cAMP-dependent, catalytic) inhibitor alpha8q21.12CV:PGCnp
PMID:cooccur
286148DPY19L4-dpy-19 like 4 (C. elegans)8q22.1CV:PGCnp
DMG:Jaffe_2016
157680VPS13BCHS1 | COH1vacuolar protein sorting 13 homolog B (yeast)8q22.2CV:PGCnp
DMG:Jaffe_2016
22898DENND3-DENN domain containing 38q24.3CV:PGCnp
DMG:Wockner_2014
79792GSDMDDF5L | DFNA5L | FKSG10 | GSDMDC1gasdermin D8q24.3CV:PGCnp
2683B4GALT1B4GAL-T1 | CDG2D | GGTB2 | GT1 | GTB | beta4Gal-T1UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 19p13CV:PGCnp
27290SPINK4HEL136 | PEC-60 | PEC60serine peptidase inhibitor, Kazal type 49p13.3CV:GWAScat
CV:GWASdb
CV:PGCnp
10497UNC13BMUNC13 | UNC13 | Unc13h2unc-13 homolog B (C. elegans)9p13.3CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Ascano FMRP targets
55958KLHL9-kelch like family member 99p22CV:PGCnp
DMG:Jaffe_2016
9414TJP2C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2tight junction protein 29q13-q21CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
29968PSAT1EPIP | NLS2 | PSA | PSAT | PSATDphosphoserine aminotransferase 19q21.2CV:PGCnp
GO_Annotation
PMID:cooccur
79695GALNT12CRCS1 | GalNAc-T12polypeptide N-acetylgalactosaminyltransferase 129q22.33CV:PGCnp
DMG:Wockner_2014
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
54566EPB41L4BCG1 | EHM2erythrocyte membrane protein band 4.1 like 4B9q31-q32CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
19ABCA1ABC-1 | ABC1 | CERP | HDLDT1 | TGDATP binding cassette subfamily A member 19q31.1CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
5887RAD23BHHR23B | HR23B | P58RAD23 homolog B, nucleotide excision repair protein9q31.2CV:PGCnp
DMG:Jaffe_2016
3309HSPA5BIP | GRP78 | HEL-S-89n | MIF2heat shock protein family A (Hsp70) member 59q33.3CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
5090PBX3-pre-B-cell leukemia homeobox 39q33.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
2040STOMBND7 | EPB7 | EPB72stomatin9q34.1CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
84929FIBCD1-fibrinogen C domain containing 19q34.12CV:GWASdb
CV:PGCnp
GO_Annotation
9919SEC16AKIAA0310 | SEC16L | p250SEC16 homolog A, endoplasmic reticulum export factor9q34.3CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
7504XKKX | MCLDS | NA | NAC | X1k | XKR1X-linked Kx blood groupXp21.1CV:PGCnp
PMID:cooccur
6303SAT1DC21 | KFSD | KFSDX | SAT | SSAT | SSAT-1spermidine/spermine N1-acetyltransferase 1Xp22.1CV:PGCnp
PMID:cooccur
Potential synaptic genes
57502NLGN4XASPGX2 | AUTSX2 | HLNX | HNL4X | NLGN4neuroligin 4, X-linkedXp22.33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
367ARAIS | AR8 | DHTR | HUMARA | HYSP1 | KD | NR3C4 | SBMA | SMAX1 | TFMandrogen receptorXq12Association
CV:PGCnp
GO_Annotation
GR_Ng
Network
PMID:cooccur
56271BEX4BEXL1brain expressed X-linked 4Xq22.1-q22.3CV:PGCnp
DEG:Sanders_2013
Potential synaptic genes
2258FGF13FGF-13 | FGF2 | FHF-2 | FHF2fibroblast growth factor 13Xq26.3CV:PGCnp
DEG:Zhao_2015
GO_Annotation
Potential synaptic genes