Search results: The pahtway p3729 has 77 genes in the original annotation. Currently, there are 52 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
84159ARID5BDESRT | MRF-2 | MRF2AT-rich interaction domain 5B10q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55280CWF19L1C19L1 | SCAR17CWF19-like 1, cell cycle control (S. pombe)10q24.31CV:PGCnp
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
8915BCL10CARMEN | CIPER | CLAP | IMD37 | c-E10 | mE10B-cell CLL/lymphoma 101p22CV:PGCnp
GO_Annotation
4774NFIACTF | NF-I/A | NF1-A | NFI-A | NFI-Lnuclear factor I/A1p31.3-p31.2CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
23318ZCCHC11PAPD3 | TUT4zinc finger CCHC-type containing 111p32.3CV:PGCnp
DMG:Jaffe_2016
9903KLHL21-kelch like family member 211p36.31CV:PGCnpAscano FMRP targets
5929RBBP5RBQ3 | SWD1retinoblastoma binding protein 51q32CV:PGCnp
DNM:Gulsuner_2013
Chromatin Remodeling Genes
3776KCNK2K2p2.1 | TPKC1 | TREK | TREK-1 | TREK1 | hTREK-1c | hTREK-1epotassium two pore domain channel subfamily K member 21q41CV:PGCnp
DMG:Jaffe_2016
Expression
5629PROX1-prospero homeobox 11q41CV:GWASdb
CV:PGCnp
PMID:cooccur
94097SFXN5BBG-TCCsideroflexin 52p13CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
CompositeSet
1329COX5BCOXVBcytochrome c oxidase subunit 5B2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
53353LRP1BLRP-DIT | LRPDITLDL receptor related protein 1B2q21.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
56475RPRMREPRIMOreprimo, TP53 dependent G2 arrest mediator candidate2q23.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_IIA
54738FEVHSRNAFEV | PET-1FEV, ETS transcription factor2q36GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
3267AGFG1HRB | RAB | RIPArfGAP with FG repeats 12q36.3CV:PGCnp
130888FBXO36Fbx36F-box protein 362q36.3CV:PGCnp
DMG:Jaffe_2016
26032SUSD5-sushi domain containing 53p22.3CV:PGCnp
GSMA_I
152330CNTN4AXCAM | BIG-2contactin 43p26.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Potential synaptic genes
23101MCF2L2ARHGEF22MCF.2 cell line derived transforming sequence-like 23q27.1CV:PGCnp
DMG:Jaffe_2016
27146FAM184B-family with sequence similarity 184 member B4p16CV:PGCnp
9575CLOCKKAT13D | bHLHe8clock circadian regulator4q12Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4825NKX6-1NKX6.1 | NKX6ANK6 homeobox 14q21.33CV:PGCnp
GO_Annotation
PMID:cooccur
266812NAP1L5DRLMnucleosome assembly protein 1 like 54q22.1|4q21-q22DEG:Zhao_2015
56916SMARCAD1ADERM | ETL1 | HEL1SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 14q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
55534MAML3CAGH3 | ERDA3 | GDN | MAM-2 | MAM2 | TNRC3mastermind like transcriptional coactivator 34q28CV:GWASdb
CV:PGCnp
GO_Annotation
166378SPATA5AFG2 | EHLMRS | SPAFspermatogenesis associated 54q28.1CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
CompositeSet
152485ZNF827-zinc finger protein 8274q31.22CV:PGCnp
DMG:vanEijk_2014
Darnell FMRP targets
56884FSTL5-follistatin like 54q32.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1946EFNA5AF1 | EFL5 | EPLG7 | GLC1M | LERK7 | RAGSephrin-A55q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
54676GTPBP2-GTP binding protein 26p21CV:PGCnp
GSMA_IIE
6631SNRPCU1C | Yhc1small nuclear ribonucleoprotein polypeptide C6p21.31CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
8335HIST1H2ABH2A/m | H2AFMhistone cluster 1, H2ab6p22.2CV:PGCnp
GSMA_I
6239RREB1FINB | HNT | LZ321 | RREB-1 | Zep-1ras responsive element binding protein 16p25CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
112609MRAP2BMIQ18 | C6orf117 | bA51G5.2melanocortin 2 receptor accessory protein 26q14.2CV:PGCnp
5683PSMA2HC3 | MU | PMSA2 | PSC2proteasome subunit alpha 27p13CV:PGCnp
Expression
221833SP8BTDSp8 transcription factor7p21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
4697NDUFA4CI-9k | CI-MLRQ | MLRQNDUFA4, mitochondrial complex associated7p21.3CV:PGCnp
DEG:Zhao_2015
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5982RFC2RFC40replication factor C subunit 27q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
154661RUNDC3BRPIB9 | RPIP9RUN domain containing 3B7q21.12CV:PGCnp
DNM:Fromer_2014
CompositeSet
857CAV1BSCL3 | CGL3 | LCCNS | MSTP085 | PPH3 | VIP21caveolin 17q31.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
78996C7orf49MRIchromosome 7 open reading frame 497q33CV:PGCnp
83648FAM167AC8orf13 | D8S265family with sequence similarity 167 member A8p23-p22CV:PGCnp
51582AZIN1AZI | AZIA1 | OAZI | OAZIN | ODC1Lantizyme inhibitor 18q22.3CV:PGCnp
DMG:Jaffe_2016
4856NOVCCN3 | IBP-9 | IGFBP-9 | IGFBP9 | NOVhnephroblastoma overexpressed8q24.1PMID:cooccur
10656KHDRBS3Etle | SALP | SLM-2 | SLM2 | T-STAR | TSTAR | etoileKH domain containing, RNA binding, signal transduction associated 38q24.2CV:PGCnp
DMG:Wockner_2014
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
80173IFT74CCDC2 | CMG-1 | CMG1intraflagellar transport 749p21.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
55958KLHL9-kelch like family member 99p22CV:PGCnp
DMG:Jaffe_2016
55357TBC1D2PARIS-1 | PARIS1 | TBC1D2ATBC1 domain family member 29q22.33CV:PGCnp
PMID:cooccur