Search results: The pahtway p642 has 59 genes in the original annotation. Currently, there are 45 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
5599MAPK8JNK | JNK-46 | JNK1 | JNK1A2 | JNK21B1/2 | PRKM8 | SAPK1 | SAPK1cmitogen-activated protein kinase 810q11.22CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
7414VCLCMD1W | CMH15 | HEL114 | MV | MVCLvinculin10q22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
5058PAK1PAKalphap21 protein (Cdc42/Rac)-activated kinase 111q13.5-q14.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
2113ETS1ETS-1 | EWSR2 | c-ets-1 | p54ETS proto-oncogene 1, transcription factor11q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3678ITGA5CD49e | FNRA | VLA-5 | VLA5Aintegrin subunit alpha 512q13.13DMG:vanEijk_2014
GO_Annotation
Network
Ascano FMRP targets
5908RAP1BK-REV | RAL1BRAP1B, member of RAS oncogene family12q14CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
9815GIT2CAT-2 | CAT2 | PKLGIT ArfGAP 212q24.1CV:PGCnp
DMG:Jaffe_2016
8874ARHGEF7BETA-PIX | COOL-1 | COOL1 | Nbla10314 | P50 | P50BP | P85 | P85COOL1 | P85SPR | PAK3 | PIXBRho guanine nucleotide exchange factor 713q34CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
87ACTN1BDPLT15actinin alpha 114q24|14q22-q24CV:PGCnp
CV:PheWAS
DMG:Nishioka_2013
DNM:Fromer_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
11099PTPN21PTPD1 | PTPRL10protein tyrosine phosphatase, non-receptor type 2114q31.3CV:GWASdb
CV:PGCnp
PMID:cooccur
5604MAP2K1CFC3 | MAPKK1 | MEK1 | MKK1 | PRKMK1mitogen-activated protein kinase kinase 115q22.1-q22.33CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
23162MAPK8IP3JIP-3 | JIP3 | JSAP1 | SYD2 | sydmitogen-activated protein kinase 8 interacting protein 316p13.3CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
9564BCAR1CAS | CAS1 | CASS1 | CRKAS | P130Casbreast cancer anti-estrogen resistance 116q23.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Ascano FMRP targets
1398CRKCRKII | p38v-crk avian sarcoma virus CT10 oncogene homolog17p13.3CV:PGCnp
Network
2886GRB7-growth factor receptor bound protein 717q12CV:PGCnp
Network
2885GRB2ASH | EGFRBP-GRB2 | Grb3-3 | MST084 | MSTP084 | NCKAP2growth factor receptor bound protein 217q24-q25CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
6455SH3GL1CNSA1 | EEN | SH3D2B | SH3P8SH3-domain GRB2-like 119p13.3CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
6237RRAS-related RAS viral (r-ras) oncogene homolog19q13.33CV:PGCnp
DMG:Wockner_2014
5906RAP1AC21KG | G-22K | KREV-1 | KREV1 | RAP1 | SMGP21RAP1A, member of RAS oncogene family1p13.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9826ARHGEF11GTRAP48 | PDZ-RHOGEFRho guanine nucleotide exchange factor 111q21CV:PGCnp
DNM:Fromer_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
58ACTA1ACTA | ASMA | CFTD | CFTD1 | CFTDM | MPFD | NEM1 | NEM2 | NEM3 | SHPMactin, alpha 1, skeletal muscle1q42.13CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
6714SRCASV | SRC1 | c-SRC | p60-SrcSRC proto-oncogene, non-receptor tyrosine kinase20q12-q13CV:PGCnp
Network
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
5335PLCG1NCKAP3 | PLC-II | PLC1 | PLC148 | PLCgamma1phospholipase C gamma 120q12-q13.1CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
5594MAPK1ERK | ERK-2 | ERK2 | ERT1 | MAPK2 | P42MAPK | PRKM1 | PRKM2 | p38 | p40 | p41 | p41mapk | p42-MAPKmitogen-activated protein kinase 122q11.21CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9475ROCK2ROCK-IIRho associated coiled-coil containing protein kinase 22p24CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8440NCK2GRB4 | NCKbetaNCK adaptor protein 22q12CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
387RHOAARH12 | ARHA | RHO12 | RHOH12ras homolog family member A3p21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Potential synaptic genes
5894RAF1CMD1NN | CRAF | NS5 | Raf-1 | c-RafRaf-1 proto-oncogene, serine/threonine kinase3p25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
CANABINOID
DOPAMINE
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
4690NCK1NCK | NCKalpha | nck-1NCK adaptor protein 13q21CV:PGCnp
GO_Annotation
Network
3693ITGB5-integrin subunit beta 53q21.2CV:PGCnp
Network
5290PIK3CACLOVE | CWS5 | MCAP | MCM | MCMTC | PI3K | p110-alphaphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha3q26.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
5295PIK3R1AGM7 | GRB1 | IMD36 | p85 | p85-ALPHAphosphoinositide-3-kinase regulatory subunit 15q13.1CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
PMID:cooccur
5921RASA1CM-AVM | CMAVM | GAP | PKWS | RASA | RASGAP | p120 | p120GAP | p120RASGAPRAS p21 protein activator 15q13.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
23092ARHGAP26GRAF | GRAF1 | OPHN1L | OPHN1L1Rho GTPase activating protein 265q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
9844ELMO1CED-12 | CED12 | ELMO-1engulfment and cell motility 17p14.1CV:PGCnp
DEG:Maycox_2009
5879RAC1MIG5 | Rac-1 | TC-25 | p21-Rac1ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)7p22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
8976WASLN-WASP | NWASP | WASPBWiskott-Aldrich syndrome-like7q31.3CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
673BRAFB-RAF1 | BRAF1 | NS7 | RAFB1B-Raf proto-oncogene, serine/threonine kinase7q34CV:PGCnp
DMG:Wockner_2014
Network
CANABINOID
DOPAMINE
SEROTONIN
50807ASAP1AMAP1 | CENTB4 | DDEF1 | PAG2 | PAP | ZG14PArfGAP with SH3 domain, ankyrin repeat and PH domain 18q24.1-q24.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
5747PTK2FADK | FAK | FAK1 | FRNK | PPP1R71 | p125FAK | pp125FAKprotein tyrosine kinase 28q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
2889RAPGEF1C3G | GRF2Rap guanine nucleotide exchange factor 19q34.3CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets