Search results: The pahtway p463 has 66 genes in the original annotation. Currently, there are 44 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
8516ITGA8-integrin subunit alpha 810p13CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
4192MDKARAP | MK | NEGF2midkine (neurite growth-promoting factor 2)11p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
975CD81CVID6 | S5.7 | TAPA1 | TSPAN28CD81 molecule11p15.5DMG:vanEijk_2014
DMG:Wockner_2014
1280COL2A1ANFH | AOM | COL11A3 | SEDC | STL1collagen type II alpha 112q13.11CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
3678ITGA5CD49e | FNRA | VLA-5 | VLA5Aintegrin subunit alpha 512q13.13DMG:vanEijk_2014
GO_Annotation
Network
Ascano FMRP targets
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
2200FBN1ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2fibrillin 115q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
1464CSPG4HMW-MAA | MCSP | MCSPG | MEL-CSPG | MSK16 | NG2chondroitin sulfate proteoglycan 415q24.2CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
CompositeSet
3675ITGA3CD49C | FRP-2 | GAP-B3 | GAPB3 | ILNEB | MSK18 | VCA-2 | VL3A | VLA3aintegrin subunit alpha 317q21.33CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
284217LAMA1LAMA | PTBHS | S-LAM-alphalaminin subunit alpha 118p11.3CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
5329PLAURCD87 | U-PAR | UPAR | URKRplasminogen activator, urokinase receptor19q13CV:PGCnp
PMID:cooccur
1301COL11A1CO11A1 | COLL6 | STL2collagen type XI alpha 11p21CV:GWASdb
CV:PGCnp
8515ITGA10PRO827integrin subunit alpha 101q21CNV:YES
GSMA_I
GSMA_IIA
93185IGSF8CD316 | CD81P3 | EWI-2 | EWI2 | KCT-4 | LIR-D1 | PGRLimmunoglobulin superfamily member 81q23.1CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4811NID1NIDnidogen 11q43CV:GWASdb
CV:PGCnp
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3911LAMA5-laminin subunit alpha 520q13.2-q13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
58494JAM2C21orf43 | CD322 | JAM-B | JAMB | PRO245 | VE-JAM | VEJAMjunctional adhesion molecule 221q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
1292COL6A2BTHLM1 | PP3610 | UCMD1collagen type VI alpha 221q22.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
1281COL3A1EDS4Acollagen type III alpha 12q31CV:PGCnp
DNM:Xu_2012
CompositeSet
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
1286COL4A4CA44collagen type IV alpha 42q35-q37CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
3913LAMB2LAMS | NPHS5laminin subunit beta 23p21CV:PGCnp
GO_Annotation
1294COL7A1EBD1 | EBDCT | EBR1 | NDNC8collagen type VII alpha 13p21.1CV:PGCnp
3680ITGA9ALPHA-RLC | ITGA4L | RLCintegrin subunit alpha 93p21.3CV:PGCnp
GSMA_I
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
255743NPNTEGFL6L | POEMnephronectin4q24CV:GWASdb
CV:PGCnp
2243FGAFib2fibrinogen alpha chain4q28CV:PGCnp
GO_Annotation
PMID:cooccur
2266FGG-fibrinogen gamma chain4q28CV:PGCnp
CV:PheWAS
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
3673ITGA2BR | CD49B | GPIa | HPA-5 | VLA-2 | VLAA2integrin subunit alpha 25q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
Ascano FMRP targets
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
929CD14-CD14 molecule5q31.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
PMID:cooccur
CompositeSet
7422VEGFAMVCD1 | VEGF | VPFvascular endothelial growth factor A6p12CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
1302COL11A2DFNA13 | DFNB53 | FBCG2 | HKE5 | PARP | STL3collagen type XI alpha 26p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
2162F13A1F13Acoagulation factor XIII A chain6p25.3-p24.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
7058THBS2TSP2thrombospondin 26q27CV:PGCnp
DMG:Wockner_2014
Expression
Potential synaptic genes
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp