Search results: The pahtway p3375 has 94 genes in the original annotation. Currently, there are 69 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
8829NRP1BDCA4 | CD304 | NP1 | NRP | VEGF165Rneuropilin 110p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
83641FAM107BC10orf45family with sequence similarity 107 member B10p13CV:GWASdb
CV:PGCnp
2746GLUD1GDH | GDH1 | GLUDglutamate dehydrogenase 110q23.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
22876INPP5FMSTP007 | MSTPO47 | SAC2 | hSAC2inositol polyphosphate-5-phosphatase F10q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
387751GVINP1GVIN1 | GVIN1P | VLIG-1 | VLIG1GTPase, very large interferon inducible pseudogene 111p15.4CV:PGCnp
23258DENND5ARAB6IP1DENN domain containing 5A11p15.4CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
26519TIMM10TIM10 | TIM10Atranslocase of inner mitochondrial membrane 10 homolog (yeast)11q12.1CV:PGCnp
PMID:cooccur
79026AHNAKAHNAKRSAHNAK nucleoprotein11q12.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
23052ENDOD1-endonuclease domain containing 111q21CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
8835SOCS2CIS2 | Cish2 | SOCS-2 | SSI-2 | SSI2 | STATI2suppressor of cytokine signaling 212qCV:PGCnp
PMID:cooccur
5027P2RX7P2X7purinergic receptor P2X 712q24CV:PGCnp
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
23191CYFIP1P140SRA-1 | SHYC | SRA-1 | SRA1cytoplasmic FMR1 interacting protein 115q11CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
6095RORANR1F1 | ROR1 | ROR2 | ROR3 | RZR-ALPHA | RZRARAR related orphan receptor A15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
10588MTHFSHsT192685,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)15q25.1CV:PGCnp
DMG:vanEijk_2014
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
3735KARSCMTRIB | DFNB89 | KARS1 | KARS2 | KRSlysyl-tRNA synthetase16q23.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3682ITGAECD103 | HUMINAEintegrin subunit alpha E17p13CV:PGCnp
DMG:Wockner_2014
5691PSMB3HC10-IIproteasome subunit beta 317q12CV:PGCnp
Network
2879GPX4GPx-4 | GSHPx-4 | MCSP | PHGPx | SMDS | snGPx | snPHGPxglutathione peroxidase 419p13.3CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
204851HIPK1Myak | Nbak2homeodomain interacting protein kinase 11p13.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
148867SLC30A7ZNT7 | ZnT-7 | ZnTL2solute carrier family 30 member 71p21.2CV:PGCnp
CV:PheWAS
ION BALANCE
79971WLSC1orf139 | EVI | GPR177 | MRP | mig-14wntless Wnt ligand secretion mediator1p31.3CV:PGCnp
GSMA_IIA
PMID:cooccur
23208SYT11SYT12 | sytXIsynaptotagmin 111q21.2Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
5710PSMD4AF | AF-1 | ASF | MCB1 | Rpn10 | S5A | pUB-R5proteasome 26S subunit, non-ATPase 41q21.3CV:PGCnp
GSMA_I
GSMA_IIA
962CD48BCM1 | BLAST | BLAST1 | MEM-102 | SLAMF2 | hCD48 | mCD48CD48 molecule1q21.3-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
64218SEMA4ACORD10 | RP35 | SEMAB | SEMBsemaphorin 4A1q22CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
116496FAM129AC1orf24 | GIG39 | NIBANfamily with sequence similarity 129 member A1q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
7832BTG2PC3 | TIS21BTG family member 21q32CV:PGCnp
PMID:cooccur
159ADSSADEH | ADSS 2adenylosuccinate synthase1q44CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
191AHCYSAHH | adoHcyaseadenosylhomocysteinase20q11.22CV:PGCnp
DMG:Wockner_2014
Network
8204NRIP1RIP140nuclear receptor interacting protein 121q11.2CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
7074TIAM1-T-cell lymphoma invasion and metastasis 121q22.11CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
7494XBP1TREB-5 | TREB5 | XBP-1 | XBP2X-box binding protein 122q12.1|22q12Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
4733DRG1NEDD3developmentally regulated GTP binding protein 122q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
3560IL2RBCD122 | IL15RB | P70-75interleukin 2 receptor subunit beta22q13.1CV:PGCnp
PMID:cooccur
822CAPGAFCP | HEL-S-66 | MCPcapping actin protein, gelsolin like2p11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
11037STON1SALF | SBLF | STN1 | STNB1stonin 12p16.3CV:PGCnp
4953ODC1ODCornithine decarboxylase 12p25CV:PGCnp
DMG:Nishioka_2013
10971YWHAQ14-3-3 | 1C5 | HS1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta2p25.1CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7850IL1R2CD121b | CDw121b | IL-1R-2 | IL-1RT-2 | IL-1RT2 | IL1R2c | IL1RBinterleukin 1 receptor type 22q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
55041PLEKHB2EVT2pleckstrin homology domain containing B22q21.1CV:PGCnp
GSMA_I
GSMA_IIA
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
6775STAT4SLEB11signal transducer and activator of transcription 42q32.2-q32.3CV:PGCnp
1493CTLA4ALPS5 | CD | CD152 | CELIAC3 | CTLA-4 | GRD4 | GSE | IDDM12cytotoxic T-lymphocyte associated protein 42q33Association
CV:PGCnp
PMID:cooccur
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
58515SELKHSPC030 | HSPC297 | SelKselenoprotein K3p21.31CV:PGCnp
DMG:Jaffe_2016
151742PPM1LPP2C-epsilon | PP2CE | PPM1-LIKEprotein phosphatase, Mg2+/Mn2+ dependent 1L3q26.1CV:PGCnp
57205ATP10DATPVDATPase phospholipid transporting 10D (putative)4p12CV:GWASdb
CV:PGCnp
952CD38ADPRC 1 | ADPRC1CD38 molecule4p15Association
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
26057ANKRD17GTAR | MASK2 | NY-BR-16ankyrin repeat domain 174q13.3CV:PGCnpCompositeSet
Darnell FMRP targets
285513GPRIN3GRIN3GPRIN family member 34q22.1CV:PGCnp
DNM:Xu_2012
CompositeSet
2982GUCY1A3GC-SA3 | GUC1A3 | GUCA3 | GUCSA3 | GUCY1A1 | MYMY6guanylate cyclase 1, soluble, alpha 34q32.1CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
3094HINT1HINT | NMAN | PKCI-1 | PRKCNH1histidine triad nucleotide binding protein 15q31.2DMG:Wockner_2014
Expression
GR_WM
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
4907NT5ECALJA | CD73 | E5NT | NT | NT5 | NTE | eN | eNT5'-nucleotidase ecto6q14-q21CV:GWASdb
CV:PGCnp
57231SNX14RGS-PX2 | SCAR20sorting nexin 146q14.3CV:PGCnp
58528RRAGDRAGD | bA11D8.2.1Ras related GTP binding D6q15CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10924SMPDL3AASM3A | ASML3a | yR36GH4.1sphingomyelin phosphodiesterase acid like 3A6q22.31CV:PGCnp
DMG:Nishioka_2013
5179PENKPE | PENK-Aproenkephalin8q12.1CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
157378TMEM65-transmembrane protein 658q24.13CV:GWASdb
CV:PGCnp
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
84232MAF1-MAF1 homolog, negative regulator of RNA polymerase III8q24.3DMG:Jaffe_2016
55234SMU1BWD | SMU-1 | fSAP57smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)9p12CV:PGCnp
158219TTC39BC9orf52tetratricopeptide repeat domain 39B9p22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
50943FOXP3AIID | DIETER | IPEX | JM2 | PIDX | XPIDforkhead box P3Xp11.23CV:PGCnp
PMID:cooccur