Search results: The pahtway p3672 has 102 genes in the original annotation. Currently, there are 64 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9644SH3PXD2AFISH | SH3MD1 | TKS5SH3 and PX domains 2A10q24.33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Ascano FMRP targets
2694GIFIF | IFMH | INF | TCN3gastric intrinsic factor11q13CV:PGCnp
DNM:Xu_2012
CompositeSet
9177HTR3B5-HT3B5-hydroxytryptamine receptor 3B11q23.1CV:PGCnp
Expression
GO_Annotation
GSMA_I
PMID:cooccur
LIGAND GATED ION SIGNALING
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
3709ITPR2ANHD | CFAP48 | INSP3R2 | IP3R2inositol 1,4,5-trisphosphate receptor type 212p11CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
Ascano FMRP targets
3845KRASC-K-RAS | CFC2 | K-RAS2A | K-RAS2B | K-RAS4A | K-RAS4B | KI-RAS | KRAS1 | KRAS2 | NS | NS3 | RALD | RASK2Kirsten rat sarcoma viral oncogene homolog12p12.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanPSP
CompositeSet
3798KIF5AD12S1889 | MY050 | NKHC | SPG10kinesin family member 5A12q13.13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
8091HMGA2BABL | HMGI-C | HMGIC | LIPO | STQTL9high mobility group AT-hook 212q15CV:PGCnp
PMID:cooccur
8848TSC22D1Ptg-2 | TGFB1I4 | TSC22TSC22 domain family member 113q14CV:PGCnp
DMG:Nishioka_2013
Network
CompositeSet
Darnell FMRP targets
122622ADSSL1-adenylosuccinate synthase like 114q32.33CV:PGCnp
DMG:Wockner_2014
5045FURINFUR | PACE | PCSK3 | SPC1furin, paired basic amino acid cleaving enzyme15q26.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
7050TGIF1HPE4 | TGIFTGFB induced factor homeobox 118p11.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4092SMAD7CRCS3 | MADH7 | MADH8SMAD family member 718q21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
3726JUNBAP-1jun B proto-oncogene19p13.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5657PRTN3ACPA | AGP7 | C-ANCA | CANCA | MBN | MBT | NP-4 | NP4 | P29 | PR-3 | PR3proteinase 319p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
58510PRODH2HSPOX1 | HYPDHproline dehydrogenase (oxidase) 219q13.1GO_Annotation
PMID:cooccur
3283HSD3B13BETAHSD | HSD3B | HSDB3 | HSDB3A | I | SDR11E1hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 11p13.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
1647GADD45ADDIT1 | GADD45growth arrest and DNA damage inducible alpha1p31.2CV:GWASdb
CV:PGCnp
GSMA_IIA
1996ELAVL4HUD | PNEMELAV like neuron-specific RNA binding protein 41p34CV:PGCnp
PMID:cooccur
5743PTGS2COX-2 | COX2 | GRIPGHS | PGG/HS | PGHS-2 | PHS-2 | hCox-2prostaglandin-endoperoxide synthase 21q25.2-q25.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
182JAG1AGS | AHD | AWS | CD339 | HJ1 | JAGL1jagged 120p12.1-p11.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
PMID:cooccur
Ascano FMRP targets
326AIREAIRE1 | APECED | APS1 | APSI | PGA1autoimmune regulator21q22.3CV:GWASdb
CV:PGCnp
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
822CAPGAFCP | HEL-S-66 | MCPcapping actin protein, gelsolin like2p11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
119ADD2ADDBadducin 22p13.3CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Potential synaptic genes
6664SOX11MRD27SRY-box 112p25CV:PGCnp
GO_Annotation
PMID:cooccur
9839ZEB2HSPC082 | SIP-1 | SIP1 | SMADIP1 | ZFHX1Bzinc finger E-box binding homeobox 22q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
3238HOXD12HOX4Hhomeobox D122q31.1CV:PGCnp
2817GPC1glypicanglypican 12q35-q37CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
6091ROBO1DUTT1 | SAX3roundabout guidance receptor 13p12CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Ascano FMRP targets
7584ZNF35HF.10 | HF10 | Zfp105zinc finger protein 353p21.32CV:PGCnp
2199FBLN2-fibulin 23p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
8553BHLHE40BHLHB2 | DEC1 | HLHB2 | SHARP-2 | STRA13 | Stra14basic helix-loop-helix family member e403p26CV:PGCnp
PMID:cooccur
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
1363CPECPHcarboxypeptidase E4q32.3CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
51166AADATKAT2 | KATIIaminoadipate aminotransferase4q33CV:PGCnp
DMG:Wockner_2014
GO_Annotation
4543MTNR1AMEL-1A-R | MT1melatonin receptor 1A4q35.1CV:PGCnp
Network
PMID:cooccur
1404HAPLN1CRT1 | CRTL1hyaluronan and proteoglycan link protein 15q14.3CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
4015LOX-lysyl oxidase5q23.2DMG:Wockner_2014
PMID:cooccur
3096HIVEP1CIRIP | CRYBP1 | GAAP | MBP-1 | PRDII-BF1 | Schnurri-1 | ZAS1 | ZNF40 | ZNF40Ahuman immunodeficiency virus type I enhancer binding protein 16p24-p22.3CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_I
CompositeSet
Darnell FMRP targets
2898GRIK2EAA4 | GLR6 | GLUK6 | GLUR6 | GluK2 | MRT6glutamate ionotropic receptor kainate type subunit 26q16.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
5340PLG-plasminogen6q26CV:PGCnp
GO_Annotation
Network
PMID:cooccur
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
5154PDGFAPDGF-A | PDGF1platelet derived growth factor subunit A7p22DMG:Jaffe_2016
Expression
60ACTBBRWS1 | PS1TP5BP1actin, beta7p22CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Darnell FMRP targets
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
10157AASSLKR/SDH | LKRSDH | LORSDHaminoadipate-semialdehyde synthase7q31.3CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
157574FBXO16FBX16F-box protein 168p21.1CV:PGCnp
GSMA_IIA
GSMA_IIE
649BMP1OI13 | PCOLC | PCP | PCP2 | TLDbone morphogenetic protein 18p21.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
83595SOX7-SRY-box 78p23.1CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
4986OPRK1K-OR-1 | KOR | KOR-1 | OPRKopioid receptor, kappa 18q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
56704JPH1CMT2K | JP-1 | JP1junctophilin 18q21CV:PGCnp
2683B4GALT1B4GAL-T1 | CDG2D | GGTB2 | GT1 | GTB | beta4Gal-T1UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 19p13CV:PGCnp
10497UNC13BMUNC13 | UNC13 | Unc13h2unc-13 homolog B (C. elegans)9p13.3CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Ascano FMRP targets
123PLIN2ADFP | ADRPperilipin 29p22.1CV:PGCnp
PMID:cooccur
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6303SAT1DC21 | KFSD | KFSDX | SAT | SSAT | SSAT-1spermidine/spermine N1-acetyltransferase 1Xp22.1CV:PGCnp
PMID:cooccur
Potential synaptic genes
695BTKAGMX1 | AT | ATK | BPK | IMD1 | PSCTK1 | XLABruton tyrosine kinaseXq21.33-q22CV:PGCnp
DNM:Kranz_2015
Network
PMID:cooccur