Search results: The pahtway p3005 has 830 genes in the original annotation. Currently, there are 547 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
3799KIF5BHEL-S-61 | KINH | KNS | KNS1 | UKHCkinesin family member 5B10p11.22CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
8829NRP1BDCA4 | CD304 | NP1 | NRP | VEGF165Rneuropilin 110p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
91452ACBD5-acyl-CoA binding domain containing 510p12.1CV:PGCnpCompositeSet
84898PLXDC2TEM7Rplexin domain containing 210p12.31CV:PGCnp
DMG:Nishioka_2013
10659CELF2BRUNOL3 | CUGBP2 | ETR-3 | ETR3 | NAPORCUGBP, Elav-like family member 210p13CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
8516ITGA8-integrin subunit alpha 810p13CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
10133OPTNALS12 | FIP2 | GLC1E | HIP7 | HYPL | NRP | TFIIIA-INTPoptineurin10p13CV:PGCnp
DMG:Nishioka_2013
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
5209PFKFB3IPFK2 | PFK2 | iPFK-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 310p15.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
5592PRKG1AAT8 | PKG | PRKG1B | PRKGR1B | cGK | cGK 1 | cGK1 | cGKI | cGKI-BETA | cGKI-alphaprotein kinase, cGMP-dependent, type I10q11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
259230SGMS1MOB | MOB1 | SMS1 | TMEM23 | hmob33sphingomyelin synthase 110q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
220965FAM13CFAM13C1family with sequence similarity 13 member C10q21.1CV:GWASdb
CV:PGCnp
DNM:Xu_2012
CompositeSet
84159ARID5BDESRT | MRF-2 | MRF2AT-rich interaction domain 5B10q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
7414VCLCMD1W | CMH15 | HEL114 | MV | MVCLvinculin10q22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
170384FUT11-fucosyltransferase 11 (alpha (1,3) fucosyltransferase)10q22.2DMG:Jaffe_2016
657BMPR1A10q23del | ACVRLK3 | ALK3 | CD292 | SKR5bone morphogenetic protein receptor type 1A10q22.3CV:PGCnp
83938C10orf11CDA017chromosome 10 open reading frame 1110q22.3CV:GWASdb
CV:PGCnp
CV:PheWAS
57089ENTPD7LALP1ectonucleoside triphosphate diphosphohydrolase 710q23-q24CV:PGCnp
DMG:Wockner_2014
3988LIPACESD | LALlipase A, lysosomal acid type10q23.2-q23.3CV:GWASdb
CV:PGCnp
10580SORBS1CAP | FLAF2 | R85FL | SH3D5 | SH3P12 | SORB1sorbin and SH3 domain containing 110q23.33CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3087HHEXHEX | HMPH | HOX11L-PEN | PRH | PRHXhematopoietically expressed homeobox10q23.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
26509MYOFFER1L3myoferlin10q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
9849ZNF518AZNF518zinc finger protein 518A10q24.1CV:GWASdb
CV:PGCnp
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
9748SLKLOSK | STK2 | bA16H23.1 | se20-9STE20 like kinase10q24.33CV:PGCnp
DMG:Jaffe_2016
2869GRK5GPRK5G protein-coupled receptor kinase 510q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
259217HSPA12A-heat shock protein family A (Hsp70) member 12A10q26.12CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5654HTRA1ARMD7 | CADASIL2 | CARASIL | HtrA | L56 | ORF480 | PRSS11HtrA serine peptidase 110q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
5795PTPRJCD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1protein tyrosine phosphatase, receptor type J11p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
26273FBXO3FBA | FBX3F-box protein 311p13CV:PGCnp
DMG:Wockner_2014
4005LMO2RBTN2 | RBTNL1 | RHOM2 | TTG2LIM domain only 211p13CV:PGCnp
DMG:Jaffe_2016
6764ST5DENND2B | HTS1 | p126suppression of tumorigenicity 511p15CV:PGCnp
DMG:Wockner_2014
1200TPP1CLN2 | GIG1 | LPIC | SCAR7 | TPP-1tripeptidyl peptidase I11p15CV:PGCnp
GO_Annotation
644943RASSF10-Ras association domain family member 1011p15.2CV:PGCnp
DMG:Wockner_2014
22800RRAS2TC21related RAS viral (r-ras) oncogene homolog 211p15.2CV:PGCnp
DMG:Wockner_2014
55742PARVACH-ILKBP | MXRA2parvin alpha11p15.3CV:GWASdb
CV:PGCnp
56674TMEM9BC11orf15TMEM9 domain family member B11p15.3CV:PGCnp
DMG:Wockner_2014
387751GVINP1GVIN1 | GVIN1P | VLIG-1 | VLIG1GTPase, very large interferon inducible pseudogene 111p15.4CV:PGCnp
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
114879OSBPL5OBPH1 | ORP5oxysterol binding protein like 511p15.4CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
79026AHNAKAHNAKRSAHNAK nucleoprotein11q12.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
408ARRB1ARB1 | ARR1arrestin, beta 111q13CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
283131NEAT1LINC00084 | NCRNA00084 | TncRNA | VINCnuclear paraspeckle assembly transcript 1 (non-protein coding)11q13.1CV:PGCnp
DMG:Wockner_2014
5138PDE2ACGS-PDE | PDE2A1 | PED2A4 | cGSPDEphosphodiesterase 2A11q13.4CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9846GAB2-GRB2 associated binding protein 211q14.1CV:PGCnp
DMG:Wockner_2014
154810AMOTL1JEAPangiomotin like 111q14.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
23052ENDOD1-endonuclease domain containing 111q21CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
120103SLC36A4PAT4solute carrier family 36 member 411q21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8898MTMR2CMT4B | CMT4B1myotubularin related protein 211q22CV:PGCnp
23621BACE1ASP2 | BACE | HSPC104beta-site APP-cleaving enzyme 111q23.2-q23.3GO_Annotation
GSMA_I
PMID:cooccur
2113ETS1ETS-1 | EWSR2 | c-ets-1 | p54ETS proto-oncogene 1, transcription factor11q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
867CBLC-CBL | CBL2 | FRA11B | NSLL | RNF55Cbl proto-oncogene, E3 ubiquitin protein ligase11q23.3CV:PGCnp
GSMA_I
Network
PMID:cooccur
121512FGD4CMT4H | FRABP | ZFYVE6FYVE, RhoGEF and PH domain containing 412p11.21CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
83857TMTC1ARG99 | OLF | TMTC1Atransmembrane and tetratricopeptide repeat containing 112p11.22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
51290ERGIC2CDA14 | Erv41 | PTX1 | cd002ERGIC and golgi 212p11.22CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
85004RERG-RAS like estrogen regulated growth inhibitor12p12.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6515SLC2A3GLUT3solute carrier family 2 member 312p13.3CV:PGCnp
PMID:cooccur
CELL METABOLISM
5800PTPROGLEPP1 | NPHS6 | PTP-OC | PTP-U2 | PTPROT | PTPU2 | R-PTP-Oprotein tyrosine phosphatase, receptor type O12p13.3-p13.2|12p13-p12CV:GWAScat
CV:PGCnp
PMID:cooccur
144402CPNE8-copine 812q12CV:PGCnp
DMG:Nishioka_2013
Expression
55652SLC48A1HRG-1 | HRG1 | hHRG-1solute carrier family 48 member 112q13.11CV:PGCnp
DEG:Zhao_2015
23109DDN-dendrin12q13.12CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
3855KRT7CK7 | K2C7 | K7 | SCLkeratin 712q13.13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5908RAP1BK-REV | RAL1BRAP1B, member of RAS oncogene family12q14CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
114882OSBPL8MST120 | MSTP120 | ORP8 | OSBP10oxysterol binding protein like 812q14CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
23592LEMD3MAN1LEM domain containing 312q14CV:PGCnp
DMG:Jaffe_2016
552AVPR1AAVPR V1a | AVPR1 | V1aRarginine vasopressin receptor 1A12q14.2CV:PGCnp
PMID:cooccur
5787PTPRBHPTP-BETA | HPTPB | PTPB | R-PTP-BETA | VEPTPprotein tyrosine phosphatase, receptor type B12q15CV:GWASdb
CV:PGCnp
7103TSPAN8CO-029 | TM4SF3tetraspanin 812q21.1CV:PGCnp
PMID:cooccur
9182RASSF9P-CIP1 | PAMCI | PCIP1Ras association domain family member 912q21.31CV:PGCnp
1848DUSP6HH19 | MKP3 | PYST1dual specificity phosphatase 612q21.33CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
59277NTN4PRO3091netrin 412q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
255394TCP11L2-t-complex 11 like 212q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
6926TBX3TBX3-ISO | UMS | XHLT-box 312q24.21CV:GWASdb
CV:PGCnp
54621VSIG10-V-set and immunoglobulin domain containing 1012q24.23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
55884WSB2SBA2WD repeat and SOCS box containing 212q24.23CV:PGCnp
DMG:Wockner_2014
6249CLIP1CLIP | CLIP-170 | CLIP170 | CYLN1 | RSNCAP-Gly domain containing linker protein 112q24.3CV:PGCnp
DMG:Wockner_2014
353116RILPL1GOSPEL | RLP1Rab interacting lysosomal protein-like 112q24.31CV:PGCnp
5025P2RX4P2X4 | P2X4Rpurinergic receptor P2X 412q24.32CV:PGCnp
GO_Annotation
2802GOLGA3GCP170 | MEA-2golgin A312q24.33CV:PGCnp
143PARP4ADPRTL1 | ARTD4 | PARP-4 | PARPL | PH5P | VAULT3 | VPARP | VWA5C | p193poly(ADP-ribose) polymerase family member 413q11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9107MTMR6-myotubularin related protein 613q12CV:PGCnp
DMG:Jaffe_2016
2321FLT1FLT | FLT-1 | VEGFR-1 | VEGFR1fms related tyrosine kinase 113q12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2700GJA3CTRCT14 | CX46 | CZP3gap junction protein alpha 313q12.11CV:PGCnp
DMG:Jaffe_2016
26524LATS2KPMlarge tumor suppressor kinase 213q12.11DMG:Wockner_2014Ascano FMRP targets
10129FRY13CDNA73 | 214K23.2 | C13orf14 | CG003 | bA207N4.2 | bA37E23.1FRY microtubule binding protein13q13.1CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
23143LRCH1CHDC1 | NP81leucine-rich repeats and calponin homology (CH) domain containing 113q14.11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
22862FNDC3AFNDC3 | HUGO | bA203I16.1 | bA203I16.5fibronectin type III domain containing 3A13q14.2CV:PGCnp
DMG:vanEijk_2014
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
27253PCDH17PCDH68 | PCH68protocadherin 1713q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1910EDNRBABCDS | ET-B | ET-BR | ETB | ETB1 | ETBR | ETRB | HSCR | HSCR2 | WS4Aendothelin receptor type B13q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1602DACH1DACHdachshund family transcription factor 113q22CV:PGCnp
4008LMO7FBX20 | FBXO20 | LOMPLIM domain 713q22.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CompositeSet
Ascano FMRP targets
10150MBNL2MBLL | MBLL39 | PRO2032muscleblind like splicing regulator 213q32.1CV:GWASdb
CV:PGCnp
1948EFNB2EPLG5 | HTKL | Htk-L | LERK5ephrin-B213q33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
57820CCNB1IP1C14orf18 | HEI10cyclin B1 interacting protein 1, E3 ubiquitin protein ligase14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
394ARHGAP5GFI2 | RhoGAP5 | p190-B | p190BRhoGAPRho GTPase activating protein 514q12CV:PGCnp
GSMA_I
4792NFKBIAIKBA | MAD-3 | NFKBINFKB inhibitor alpha14q13CV:GWASdb
CV:PGCnp
Network
6655SOS2NS9SOS Ras/Rho guanine nucleotide exchange factor 214q21CV:PGCnp
DNM:Gulsuner_2013
57161PELI2-pellino E3 ubiquitin protein ligase family member 214q21CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
161198CLEC14AC14orf27 | CEG1 | EGFR-5C-type lectin domain family 14 member A14q21.1CV:GWASdb
CV:PGCnp
10979FERMT2KIND2 | MIG2 | PLEKHC1 | UNC112 | UNC112B | mig-2fermitin family member 214q22.1CV:PGCnp
DMG:Wockner_2014
Expression
122786FRMD6C14orf31 | EX1 | Willin | c14_5320FERM domain containing 614q22.1CV:PGCnp
22795NID2NID-2nidogen 214q22.1CV:PGCnp
DMG:Wockner_2014
5583PRKCHPKC-L | PKCL | PRKCL | nPKC-etaprotein kinase C eta14q23.1CV:GWASdb
CV:PGCnp
PMID:cooccur
5926ARID4ARBBP-1 | RBBP1 | RBP-1 | RBP1AT-rich interaction domain 4A14q23.1CV:PGCnp
81537SGPP1SPPase1sphingosine-1-phosphate phosphatase 114q23.2CV:PGCnp
PMID:cooccur
8816DCAF5BCRG2 | BCRP2 | D14S1461E | WDR22DDB1 and CUL4 associated factor 514q24.1CV:PGCnp
55333SYNJ2BPARIP2 | OMP25synaptojanin 2 binding protein14q24.2CV:PGCnp
9517SPTLC2HSN1C | LCB2 | LCB2A | NSAN1C | SPT2 | hLCB2aserine palmitoyltransferase long chain base subunit 214q24.3CV:PGCnp
Expression
PMID:cooccur
Ascano FMRP targets
2581GALC-galactosylceramidase14q31CV:PGCnp
PMID:cooccur
2957GTF2A1TF2A1 | TFIIA | TFIIA-42 | TFIIALgeneral transcription factor IIA 114q31.1CV:GWASdb
CV:PGCnp
2009EML1ELP79 | EMAP | EMAPL | HuEMAPechinoderm microtubule associated protein like 114q32CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
801CALM1CALML2 | CAMI | CPVT4 | DD132 | LQT14 | PHKD | caMcalmodulin 1 (phosphorylase kinase, delta)14q32.11ADT:Sun_2012
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_mGluR5
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9321TRIP11ACG1A | CEV14 | GMAP-210 | GMAP210 | TRIP-11 | TRIP230thyroid hormone receptor interactor 1114q32.12CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
23368PPP1R13BASPP1 | p53BP2-like | p85protein phosphatase 1 regulatory subunit 13B14q32.33CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Ambalavanan_2016
3320HSP90AA1EL52 | HEL-S-65p | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP-2 | LAP2heat shock protein 90kDa alpha family class A member 114q32.33CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
57194ATP10AATP10C | ATPVA | ATPVCATPase phospholipid transporting 10A (putative)15q11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
9990SLC12A6ACCPN | KCC3 | KCC3A | KCC3Bsolute carrier family 12 member 615q13CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
8773SNAP23HsT17016 | SNAP-23 | SNAP23A | SNAP23Bsynaptosome associated protein 23kDa15q14CV:PGCnp
GO_Annotation
Network
EXOCYTOSIS
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
9728SECISBP2LSBP2L | SLANSECIS binding protein 2 like15q21.1CV:PGCnpCompositeSet
Darnell FMRP targets
29766TMOD3UTMODtropomodulin 315q21.2CV:PGCnp
DMG:Jaffe_2016
23431AP4E1CPSQ4 | SPG51adaptor related protein complex 4 epsilon 1 subunit15q21.2CV:PGCnp
DMG:Jaffe_2016
145781GCOM1GRINL1A | Gcom2 | MYZAP | MYZAP-POLR2M | gcomGRINL1A complex locus 115q21.3CV:GWAScat
CV:PGCnp
54629FAM63B-family with sequence similarity 63 member B15q21.3CV:PGCnp
PMID:cooccur
55075UACANUCLINGuveal autoantigen with coiled-coil domains and ankyrin repeats15q22-q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
4643MYO1EFSGS6 | HuncM-IC | MYO1Cmyosin IE15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
92912UBE2Q2-ubiquitin conjugating enzyme E2 Q215q24.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
400451FAM174B-family with sequence similarity 174 member B15q26.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
123355LRRC28-leucine rich repeat containing 2815q26.3CV:PGCnp
DMG:Wockner_2014
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
5930RBBP6MY038 | P2P-R | PACT | RBQ-1 | SNAMAretinoblastoma binding protein 616p12.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIE
79905TMC7-transmembrane channel like 716p12.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
51760SYT17sytXVIIsynaptotagmin 1716p12.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_IIE
64711HS3ST63-OST-6 | HS3ST5heparan sulfate-glucosamine 3-sulfotransferase 616p13.3CV:PGCnp
1387CREBBPCBP | KAT3A | RSTSCREB binding protein16p13.3CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
3029HAGHGLO2 | GLX2 | GLXII | HAGH1hydroxyacylglutathione hydrolase16p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
114990VASNSLITL2vasorin16p13.3CV:PGCnp
DMG:Wockner_2014
388272C16orf87-chromosome 16 open reading frame 8716q11.2CV:PGCnp
DMG:Jaffe_2016
79567FAM65A-family with sequence similarity 65 member A16q22.1CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
1003CDH57B4 | CD144cadherin 516q22.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
1783DYNC1LI2DNCLI2 | LIC2dynein cytoplasmic 1 light intermediate chain 216q22.1CV:PGCnpCompositeSet
863CBFA2T3ETO2 | MTG16 | MTGR2 | ZMYND4core-binding factor, runt domain, alpha subunit 2; translocated to, 316q24CV:PGCnp
DMG:Wockner_2014
22980TCF25FKSG26 | Hulp1 | NULP1 | PRO2620 | hKIAA1049transcription factor 25 (basic helix-loop-helix)16q24.3CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
23164MPRIPM-RIP | MRIP | RHOIP3 | RIP3 | p116Ripmyosin phosphatase Rho interacting protein17p11.2CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
22905EPN2EHB21epsin 217p11.2CV:PGCnp
DMG:Wockner_2014
9706ULK2ATG1B | Unc51.2unc-51 like autophagy activating kinase 217p11.2CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
22899ARHGEF15ARGEF15 | E5 | Ephexin5 | Vsm-RhoGEFRho guanine nucleotide exchange factor 1517p13.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
146760RTN4RL1NGRH2 | NgR3reticulon 4 receptor-like 117p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1398CRKCRKII | p38v-crk avian sarcoma virus CT10 oncogene homolog17p13.3CV:PGCnp
Network
4641MYO1CMMI-beta | MMIb | NMI | myr2myosin IC17p13.3CV:PGCnpAscano FMRP targets
23531MMDMMA | MMD1 | PAQR11monocyte to macrophage differentiation-associated17qCV:PGCnp
PMID:cooccur
3927LASP1Lasp-1 | MLN50LIM and SH3 protein 117q11-q21.3CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
57551TAOK1KFC-B | MAP3K16 | MARKK | PSK-2 | PSK2 | TAO1 | hKFC-B | hTAOK1TAO kinase 117q11.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
51701NLK-nemo-like kinase17q11.2CV:PGCnp
399687MYO18AMYSPDZ | SPR210myosin XVIIIA17q11.2CV:PGCnp
DNM:Fromer_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4642MYO1DPPP1R108 | myr4myosin ID17q11.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
3430IFI35IFP35interferon induced protein 3517q21CV:PGCnp
4905NSFSKD2N-ethylmaleimide sensitive factor17q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1845DUSP3VHRdual specificity phosphatase 317q21CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
4137MAPTDDPAC | FTDP-17 | MAPTL | MSTD | MTBT1 | MTBT2 | PPND | PPP1R103 | TAUmicrotubule associated protein tau17q21.1CV:PGCnp
CV:PheWAS
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
284119PTRFCAVIN | CAVIN1 | CGL4 | FKSG13 | cavin-1polymerase I and transcript release factor17q21.2CV:PGCnp
DMG:Wockner_2014
4356MPP3DLG3membrane protein, palmitoylated 317q21.31PMID:cooccurPROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
6668SP2-Sp2 transcription factor17q21.32CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
9969MED13ARC250 | DRIP250 | HSPC221 | THRAP1 | TRAP240mediator complex subunit 1317q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
CompositeSet
Darnell FMRP targets
4215MAP3K3MAPKKK3 | MEKK3mitogen-activated protein kinase kinase kinase 317q23.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
55852TEX2HT008 | TMEM96testis expressed 217q23.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
26207PITPNC1M-RDGB-beta | MRDGBbeta | RDGB-BETA | RDGBB | RDGBB1phosphatidylinositol transfer protein, cytoplasmic 117q24.2CV:PGCnp
DMG:Wockner_2014
5578PRKCAAAG6 | PKC-alpha | PKCA | PRKACAprotein kinase C alpha17q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
23461ABCA5ABC13 | EST90625ATP binding cassette subfamily A member 517q24.3CV:PGCnp
DMG:Wockner_2014
57132CHMP1BC10orf2 | C18-ORF2 | C18orf2 | CHMP1.5 | Vps46-2 | Vps46B | hVps46-2charged multivesicular body protein 1B18p11.21CV:PGCnp
56907SPIRE1Spir-1spire type actin nucleation factor 118p11.21CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
9663LPIN2-lipin 218p11.31CV:PGCnp
CV:PheWAS
CompositeSet
Darnell FMRP targets
79822ARHGAP28-Rho GTPase activating protein 2818p11.31CV:PGCnp
81035COLEC12CLP1 | NSR2 | SCARA4 | SRCLcollectin subfamily member 1218p11.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6093ROCK1P160ROCK | ROCK-IRho associated coiled-coil containing protein kinase 118q11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
8780RIOK3SUDDRIO kinase 318q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
1837DTNAD18S892E | DRP3 | DTN | DTN-A | LVNC1dystrobrevin alpha18q12CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10892MALT1IMD12 | MLT | MLT1 | PCASP1MALT1 paracaspase18q21CV:PGCnp
DMG:Jaffe_2016
5205ATP8B1ATPIC | BRIC | FIC1 | ICP1 | PFIC | PFIC1ATPase phospholipid transporting 8B118q21.31CV:PGCnp
CV:PheWAS
90701SEC11CSEC11L3 | SPC21 | SPCS4CSEC11 homolog C, signal peptidase complex subunit18q21.32CV:GWASdb
CV:PGCnp
GO_Annotation
9710KIAA0355-KIAA035519q13.11CV:PGCnp
DMG:Montano_2016
57716PRXCMT4Fperiaxin19q13.2GO_Annotation
PMID:cooccur
90332EXOC3L2XTP7exocyst complex component 3-like 219q13.32CV:PGCnp
DMG:Wockner_2014
91663MYADMSB135myeloid-associated differentiation marker19q13.42DMG:vanEijk_2014
10100TSPAN2NET3 | TSN2 | TSPAN-2tetraspanin 21p13.2CV:PGCnp
GSMA_I
GSMA_IIA
5906RAP1AC21KG | G-22K | KREV-1 | KREV1 | RAP1 | SMGP21RAP1A, member of RAS oncogene family1p13.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6814STXBP3MUNC18-3 | MUNC18C | PSP | UNC-18Csyntaxin binding protein 31p13.3DMG:Jaffe_2016CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
55599RNPC3RBM40 | RNP | SNRNP65RNA binding region (RNP1, RRM) containing 31p21CV:PGCnp
DMG:Jaffe_2016
1486CTBSCTBchitobiase1p22CV:PGCnp
PMID:cooccur
5142PDE4BDPDE4 | PDEIVBphosphodiesterase 4B1p31Association
CV:GWASdb
CV:PGCnp
GR_Ng
GSMA_IIA
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1629DBTBCATE2 | BCKAD-E2 | BCKADE2 | BCOADC-E2 | E2 | E2Bdihydrolipoamide branched chain transacylase E21p31CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
11080DNAJB4DNAJW | DjB4 | HLJ1DnaJ heat shock protein family (Hsp40) member B41p31.1CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
CompositeSet
256435ST6GALNAC3PRO7177 | SIAT7C | ST6GALNACIII | STYST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 31p31.1CV:PGCnp
GSMA_IIA
PMID:cooccur
79739TTLL7-tubulin tyrosine ligase like 71p31.1CV:PGCnp
Expression
GO_Annotation
GSMA_IIA
CompositeSet
Darnell FMRP targets
1647GADD45ADDIT1 | GADD45growth arrest and DNA damage inducible alpha1p31.2CV:GWASdb
CV:PGCnp
GSMA_IIA
84251SGIP1-SH3-domain GRB2-like (endophilin) interacting protein 11p31.3CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
26994RNF11CGI-123 | SID1669ring finger protein 111p32CV:GWASdb
CV:PGCnp
Network
23499MACF1ABP620 | ACF7 | MACF | OFC4microtubule-actin crosslinking factor 11p32-p31CV:GWASdb
CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3716JAK1JAK1A | JAK1B | JTK3Janus kinase 11p32.3-p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1580CYP4B1CYPIVB1 | P-450HPcytochrome P450 family 4 subfamily B member 11p33CV:GWASdb
CV:PGCnp
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
79647AKIRIN1C1orf108 | STRF2akirin 11p34.3CV:GWASdb
CV:PGCnp
2782GNB1-G protein subunit beta 11p36.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
405ARNTHIF-1-beta | HIF-1beta | HIF1-beta | HIF1B | HIF1BETA | TANGO | bHLHe2aryl hydrocarbon receptor nuclear translocator1q21CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
56957OTUD7BCEZANNE | ZA20D1OTU deubiquitinase 7B1q21.2CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
55870ASH1LASH1 | ASH1L1 | KMT2Hash1 (absent, small, or homeotic)-like (Drosophila)1q22CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
55243KIRRELNEPH1kin of IRRE like (Drosophila)1q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
10763NESNbla00170nestin1q23.1CV:PGCnp
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
387597ILDR2C1orf32 | dJ782G3.1immunoglobulin like domain containing receptor 21q24.1CV:PGCnp
DMG:Jaffe_2016
79577CDC73C1orf28 | FIHP | HPTJT | HRPT1 | HRPT2 | HYXcell division cycle 731q25CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
80896NPLC112 | C1orf13 | NAL | NPL1N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)1q25CV:GWASdb
CV:PGCnp
PMID:cooccur
80267EDEM3C1orf22ER degradation enhancer, mannosidase alpha-like 31q25CV:PGCnp
DMG:Wockner_2014
7827NPHS2PDCN | SRN1NPHS2 podocin1q25.2CV:PGCnp
DMG:Nishioka_2013
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
1604CD55CR | CROM | DAF | TCCD55 molecule (Cromer blood group)1q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
25778DSTYKCAKUT1 | DustyPK | HDCMD38P | RIP5 | RIPK5dual serine/threonine and tyrosine protein kinase1q32.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
9911TMCC2HUCEP11transmembrane and coiled-coil domain family 21q32.1CV:PGCnp
DMG:Jaffe_2016
4139MARK1MARK | Par-1c | Par1cmicrotubule affinity regulating kinase 11q41CV:PGCnp
PMID:cooccur
25782RAB3GAP2RAB3-GAP150 | RAB3GAP150 | SPG69 | WARBM2 | p150RAB3 GTPase activating non-catalytic protein subunit 21q41CV:PGCnp
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
1130LYSTCHS | CHS1lysosomal trafficking regulator1q42.1-q42.2CV:PGCnp
DMG:Wockner_2014
3707ITPKBIP3-3KB | IP3K | IP3K-B | IP3KB | PIG37inositol-trisphosphate 3-kinase B1q42.13CV:PGCnp
DMG:Wockner_2014
Network
359948IRF2BP2-interferon regulatory factor 2 binding protein 21q42.3CV:PGCnp
DMG:Wockner_2014
4811NID1NIDnidogen 11q43CV:GWASdb
CV:PGCnp
7056THBDAHUS6 | BDCA3 | CD141 | THPH12 | THRM | TMthrombomodulin20p11.2CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
54453RIN2MACS | RASSF4Ras and Rab interactor 220p11.22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
140885SIRPABIT | CD172A | MFR | MYD-1 | P84 | PTPNS1 | SHPS1 | SIRPsignal regulatory protein alpha20p13CV:PGCnp
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
26051PPP1R16BANKRD4 | TIMAPprotein phosphatase 1 regulatory subunit 16B20q11.23CV:GWAScat
CV:PGC128
CV:PGCnp
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10955SERINC3AIGP1 | DIFF33 | SBBI99 | TDE | TDE1 | TMS-1serine incorporator 320q13.12DMG:Jaffe_2016
55959SULF2HSULF-2sulfatase 220q13.12CV:PGCnp
DNM:Fromer_2014
CompositeSet
140685ZBTB46BTBD4 | BZEL | RINZF | ZNF340 | dJ583P15.7 | dJ583P15.8zinc finger and BTB domain containing 4620q13.33CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
58494JAM2C21orf43 | CD322 | JAM-B | JAMB | PRO245 | VE-JAM | VEJAMjunctional adhesion molecule 221q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
11096ADAMTS5ADAM-TS 11 | ADAM-TS 5 | ADAM-TS5 | ADAMTS-11 | ADAMTS-5 | ADAMTS11 | ADMP-2ADAM metallopeptidase with thrombospondin type 1 motif 521q21.3CV:PGCnp
DMG:Jaffe_2016
6453ITSN1ITSN | SH3D1A | SH3P17intersectin 121q22.1-q22.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6651SONBASS1 | C21orf50 | DBP-5 | NREBP | SON3SON DNA binding protein21q22.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
1827RCAN1ADAPT78 | CSP1 | DSC1 | DSCR1 | MCIP1 | RCN1regulator of calcineurin 121q22.12CV:PGCnp
GO_Annotation
PMID:cooccur
2078ERGerg-3 | p55v-ets avian erythroblastosis virus E26 oncogene homolog21q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
421ARVCF-armadillo repeat gene deleted in velocardiofacial syndrome22q11.21Association
CNV:YES
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
55000TUG1LINC00080 | NCRNA00080 | TI-227Htaurine up-regulated 1 (non-protein coding)22q12.2CV:PGCnp
7078TIMP3HSMRK222 | K222 | K222TA2 | SFDTIMP metallopeptidase inhibitor 322q12.3Association
CV:PGCnp
GSMA_I
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
29775CARD10BIMP1 | CARMA3caspase recruitment domain family member 1022q13.1CV:PGCnp
DMG:Montano_2016
7844RNF103HKF-1 | KF-1 | KF1 | ZFP-103 | ZFP103ring finger protein 1032p11.2CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GO_Annotation
GSMA_I
307ANXA4ANX4 | HEL-S-274 | P32.5 | PAP-II | PIG28 | PP4-X | ZAP36annexin A42p13CV:PGCnp
7360UGP2UDPG | UDPGP | UDPGP2 | UGP1 | UGPP1 | UGPP2 | pHC379UDP-glucose pyrophosphorylase 22p14-p13CV:PGCnp
DMG:Jaffe_2016
494143CHAC2-ChaC, cation transport regulator homolog 2 (E. coli)2p16CV:PGCnp
11037STON1SALF | SBLF | STN1 | STNB1stonin 12p16.3CV:PGCnp
51232CRIM1CRIM-1 | S52cysteine rich transmembrane BMP regulator 1 (chordin-like)2p21CV:PGCnp
GO_Annotation
805CALM2CAMII | LQT15 | PHKD | PHKD2 | caMcalmodulin 2 (phosphorylase kinase, delta)2p21CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
10602CDC42EP3BORG2 | CEP3 | UB1CDC42 effector protein 32p21CV:GWASdb
CV:PGCnp
PMID:cooccur
2034EPAS1ECYT4 | HIF2A | HLF | MOP2 | PASD2 | bHLHe73endothelial PAS domain protein 12p21-p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3344FOXN2HTLFforkhead box N22p22-p16CV:GWAScat
CV:GWASdb
CV:PGCnp
54497HEATR5B-HEAT repeat containing 5B2p22.2CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
6801STRNSG2NAstriatin2p22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
84272YIPF4FinGER4 | Nbla11189Yip1 domain family member 42p22.3CV:PGCnp
DEG:Zhao_2015
50618ITSN2PRO2015 | SH3D1B | SH3P18 | SWA | SWAPintersectin 22p23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
28951TRIB2C5FW | GS3955 | TRB2tribbles pseudokinase 22p24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3631INPP4AINPP4 | TVAS1inositol polyphosphate-4-phosphatase type I A2q11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8440NCK2GRB4 | NCKbetaNCK adaptor protein 22q12CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
3987LIMS1PINCH | PINCH-1 | PINCH1LIM zinc finger domain containing 12q12.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
10461MERTKMER | RP38 | Tyro12 | c-Eyk | c-merMER proto-oncogene, tyrosine kinase2q14.1CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
5899RALB-v-ral simian leukemia viral oncogene homolog B2q14.2CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
Expression
GSMA_I
GSMA_IIA
10746MAP3K2MEKK2 | MEKK2Bmitogen-activated protein kinase kinase kinase 22q14.3GSMA_I
GSMA_IIA
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
6332SCN7ANaG | Nav2.1 | Nav2.2 | SCN6Asodium voltage-gated channel alpha subunit 72q21-q23CV:PGCnp
GSMA_IIA
PMID:cooccur
9839ZEB2HSPC082 | SIP-1 | SIP1 | SMADIP1 | ZFHX1Bzinc finger E-box binding homeobox 22q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
55777MBD5MRD1methyl-CpG binding domain protein 52q23.1CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
114793FMNL2FHOD2formin like 22q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_IIA
CompositeSet
51776ZAKAZK | MLK7 | MLT | MLTK | MRK | mlklak | pksterile alpha motif and leucine zipper containing kinase AZK2q24.2CV:PGCnp
5937RBMS1C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1RNA binding motif, single stranded interacting protein 12q24.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
85461TANC1ROLSB | TANCtetratricopeptide repeat, ankyrin repeat and coiled-coil containing 12q24.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
CompositeSet
Potential synaptic genes
253782CERS6CERS5 | LASS6ceramide synthase 62q24.3CV:PGCnp
GSMA_IIA
1803DPP4ADABP | ADCP2 | CD26 | DPPIV | TP103dipeptidyl peptidase 42q24.3CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
130507UBR3ZNF650ubiquitin protein ligase E3 component n-recognin 3 (putative)2q31.1CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
115677NOSTRINDaIP2nitric oxide synthase trafficking2q31.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
6744SSFA2CS-1 | CS1 | KRAP | SPAG13sperm specific antigen 22q31.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6772STAT1CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91signal transducer and activator of transcription 12q32.2CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
57520HECW2NEDL2HECT, C2 and WW domain containing E3 ubiquitin protein ligase 22q32.3CV:GWASdb
CV:PGCnp
51454GULP1CED-6 | CED6 | GULPGULP, engulfment adaptor PTB domain containing 12q32.3-q33CV:PGCnp
PMID:cooccur
66008TRAK2ALS2CR3 | CALS-C | GRIF-1 | GRIF1 | MILT2 | OIP98trafficking protein, kinesin binding 22q33CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
5334PLCL1PLCE | PLCL | PLDL1 | PPP1R127 | PRIPphospholipase C like 12q33CV:PGCnp
DMG:Jaffe_2016
80219COQ10B-coenzyme Q10B2q33.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
57404CYP20A1CYP-Mcytochrome P450 family 20 subfamily A member 12q33.2CV:PGCnp
DMG:Nishioka_2013
65065NBEAL1A530083I02Rik | ALS2CR16 | ALS2CR17neurobeachin like 12q33.2CV:PGCnp
54891INO80D-INO80 complex subunit D2q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
10290SPEGAPEG-1 | APEG1 | BPEG | CNM5 | SPEGalpha | SPEGbetaSPEG complex locus2q35CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
2817GPC1glypicanglypican 12q35-q37CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
1286COL4A4CA44collagen type IV alpha 42q35-q37CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
3667IRS1HIRS-1insulin receptor substrate 12q36CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
57590WDFY1FENS-1 | WDF1 | ZFYVE17WD repeat and FYVE domain containing 12q36.1DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
3267AGFG1HRB | RAB | RIPArfGAP with FG repeats 12q36.3CV:PGCnp
9208LRRFIP1FLAP-1 | FLAP1 | FLIIAP1 | GCF-2 | GCF2 | HUFI-1 | TRIPleucine rich repeat (in FLII) interacting protein 12q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
8864PER2FASPS | FASPS1period circadian clock 22q37.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23272FAM208AC3orf63 | RAP140 | se89-1family with sequence similarity 208 member A3p14.3CV:PGCnp
9034CCRL2ACKR5 | CKRX | CRAM | CRAM-A | CRAM-B | HCRC-C motif chemokine receptor like 23p21DMG:Wockner_2014
5793PTPRGHPTPG | PTPG | R-PTP-GAMMA | RPTPGprotein tyrosine phosphatase, receptor type G3p21-p14CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
DNM:Kranz_2015
PMID:cooccur
TYROSINE KINASE SIGNALING
CompositeSet
Darnell FMRP targets
51460SFMBT1RU1 | SFMBT | hSFMBTScm-like with four mbt domains 13p21.1CV:PGCnp
LK:YES
56920SEMA3Gsem2semaphorin 3G3p21.1CV:PGCnp
LK:YES
6314ATXN7ADCAII | OPCA3 | SCA7ataxin 73p21.1-p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
54585LZTFL1BBS17leucine zipper transcription factor like 13p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
7869SEMA3BLUCA-1 | SEMA5 | SEMAA | SemA | semaVsemaphorin 3B3p21.3DMG:Wockner_2014
GO_Annotation
10217CTDSPLC3orf8 | HYA22 | PSR1 | RBSP3 | SCP3CTD small phosphatase like3p21.3CV:PGCnp
GSMA_I
3680ITGA9ALPHA-RLC | ITGA4L | RLCintegrin subunit alpha 93p21.3CV:PGCnp
GSMA_I
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
152273FGD5ZFYVE23FYVE, RhoGEF and PH domain containing 53p25.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
9922IQSEC1ARF-GEP100 | ARFGEP100 | BRAG2 | GEP100IQ motif and Sec7 domain 13p25.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
55207ARL8BARL10C | Gie1ADP ribosylation factor like GTPase 8B3p26.1CV:PGCnp
DMG:vanEijk_2014
Network
INTRACELLULAR TRAFFICKING
2917GRM7GLUR7 | GPRC1G | MGLU7 | MGLUR7 | PPP1R87glutamate receptor, metabotropic 73p26.1-p25.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
200894ARL13BARL2L1 | JBTS8ADP ribosylation factor like GTPase 13B3q11.1CV:PGCnp
GSMA_IIA
GSMA_IIE
5627PROS1PROS | PS21 | PS22 | PS23 | PS24 | PS25 | PSA | THPH5 | THPH6protein S (alpha)3q11.2CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
10402ST3GAL6SIAT10 | ST3GALVIST3 beta-galactoside alpha-2,3-sialyltransferase 63q12.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_IIA
GSMA_IIE
56987BBXARTC1 | HBP2 | HSPC339 | MDS001bobby sox homolog (Drosophila)3q13.1CV:GWASdb
CV:PGCnp
CV:PheWAS
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
868CBLBCbl-b | Nbla00127 | RNF56Cbl proto-oncogene B, E3 ubiquitin protein ligase3q13.11CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
55032SLC35A5-solute carrier family 35 member A53q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
57514ARHGAP31AOS1 | CDGAPRho GTPase activating protein 313q13.33CV:GWAScat
CV:GWASdb
CV:PGCnp
6578SLCO2A1MATR1 | OATP2A1 | PGT | PHOAR2 | SLC21A2solute carrier organic anion transporter family member 2A13q21CV:PGCnp
4071TM4SF1H-L6 | L6 | M3S1 | TAAL6transmembrane 4 L six family member 13q21-q25DMG:Wockner_2014
54625PARP14ARTD8 | BAL2 | PARP-14 | pART8poly(ADP-ribose) polymerase family member 143q21.1CV:PGCnpAscano FMRP targets
3693ITGB5-integrin subunit beta 53q21.2CV:PGCnp
Network
11343MGLLHU-K5 | HUK5 | MAGL | MGLmonoglyceride lipase3q21.3CV:PGCnp
PMID:cooccur
CANABINOID
CELL METABOLISM
5922RASA2GAP1MRAS p21 protein activator 23q22-q23CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
51560RAB6B-RAB6B, member RAS oncogene family3q22.1CV:PGCnp
DMG:Jaffe_2016
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2047EPHB1ELK | EPHT2 | Hek6 | NETEPH receptor B13q22.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
25937WWTR1TAZWW domain containing transcription regulator 13q23-q24CV:PGCnp
57088PLSCR4TRA1phospholipid scramblase 43q24CV:PGCnp
PMID:cooccur
205428C3orf58DIA1 | GoPro49 | HASFchromosome 3 open reading frame 583q24CV:PGCnp
DMG:Nishioka_2013
185AGTR1AG2S | AGTR1B | AT1 | AT1AR | AT1B | AT1BR | AT1R | AT2R1 | HAT1Rangiotensin II receptor type 13q24CV:PGCnp
DMG:Jaffe_2016
51714SELT-selenoprotein T3q25.1CV:PGCnp
DMG:Wockner_2014
116931MED12LNOPAR | TNRC11L | TRALP | TRALPUSHmediator complex subunit 12 like3q25.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
29970SCHIP1SCHIP-1schwannomin interacting protein 13q25.32-q25.33CV:PGCnp
DMG:Wockner_2014
5337PLD1-phospholipase D13q26CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
5274SERPINI1PI12 | neuroserpinserpin peptidase inhibitor, clade I (neuroserpin), member 13q26.1CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
5290PIK3CACLOVE | CWS5 | MCAP | MCM | MCMTC | PI3K | p110-alphaphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha3q26.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
64778FNDC3BFAD104 | PRO4979 | YVTM2421fibronectin type III domain containing 3B3q26.31CV:PGCnp
Expression
151613TTC14DRDL5813 | PRO19630tetratricopeptide repeat domain 143q26.33CV:PGCnp
4026LPP-LIM domain containing preferred translocation partner in lipoma3q28CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
5504PPP1R2IPP-2 | IPP2protein phosphatase 1 regulatory inhibitor subunit 23q29CV:PGCnp
PMID:cooccur
23527ACAP2CENTB2 | CNT-B2ArfGAP with coiled-coil, ankyrin repeat and PH domains 23q29CV:PGCnp
DMG:Jaffe_2016
57606SLAIN2KIAA1458SLAIN motif family member 24p11CV:PGCnp
285527FRYLAF4p12 | KIAA0826 | MOR2FRY like transcription coactivator4p11CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
Ascano FMRP targets
2557GABRA4-gamma-aminobutyric acid type A receptor alpha4 subunit4p12CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
323APBB2FE65L | FE65L1amyloid beta precursor protein binding family B member 24p13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
55161TMEM331600019D15Rik | SHINC3transmembrane protein 334p13CV:GWASdb
CV:PGCnp
116984ARAP2CENTD1 | PARXArfGAP with RhoGAP domain, ankyrin repeat and PH domain 24p14CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
55276PGM2MSTP006phosphoglucomutase 24p14CV:GWASdb
CV:PGCnp
CELL METABOLISM
51088KLHL5-kelch like family member 54p14CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
23216TBC1D1TBC | TBC1TBC1 domain family member 14p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
952CD38ADPRC 1 | ADPRC1CD38 molecule4p15Association
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
9575CLOCKKAT13D | bHLHe8clock circadian regulator4q12Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
64854USP46-ubiquitin specific peptidase 464q12PMID:cooccur
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
57619SHROOM3APXL3 | MSTP013 | SHRM | ShrmLshroom family member 34q21.1CV:PGCnp
CV:PheWAS
Ascano FMRP targets
132660LIN54CXCDC1 | JC8.6 | MIP120 | TCX1lin-54 DREAM MuvB core complex component4q21.22CV:PGCnp
DMG:Jaffe_2016
83478ARHGAP24FILGAP | RC-GAP72 | RCGAP72 | p73 | p73RhoGAPRho GTPase activating protein 244q22.1CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
285513GPRIN3GRIN3GPRIN family member 34q22.1CV:PGCnp
DNM:Xu_2012
CompositeSet
152926PPM1KBDP | MSUDMV | PP2Ckappa | PP2Cm | PTMP | UG0882E07protein phosphatase, Mg2+/Mn2+ dependent 1K4q22.1CV:GWASdb
CV:PGCnp
10098TSPAN5NET-4 | NET4 | TM4SF9 | TSPAN-5tetraspanin 54q23CV:PGCnp
DMG:Jaffe_2016
51705EMCNEMCN2 | MUC14endomucin4q24CV:GWASdb
CV:PGCnp
1950EGFHOMG4 | URGepidermal growth factor4q25Association
CV:PGCnp
GR_Ng
GR_WM
Network
PMID:cooccur
84570COL25A1AMY | CFEOM5 | CLAC | CLAC-P | CLACPcollagen type XXV alpha 14q25CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
27123DKK2DKK-2dickkopf WNT signaling pathway inhibitor 24q25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
817CAMK2DCAMKDcalcium/calmodulin-dependent protein kinase II delta4q26CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
80854SETD7KMT7 | SET7 | SET7/9 | SET9SET domain containing lysine methyltransferase 74q28CV:PGCnpChromatin Remodeling Genes
60592SCOCHRIHFB2072 | SCOCO | UNC-69short coiled-coil protein4q31.1CV:PGCnp
DMG:Jaffe_2016
Network
2982GUCY1A3GC-SA3 | GUC1A3 | GUCA3 | GUCSA3 | GUCY1A1 | MYMY6guanylate cyclase 1, soluble, alpha 34q32.1CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
23022PALLDCGI-151 | CGI151 | MYN | PNCA1 | SIH002palladin, cytoskeletal associated protein4q32.3CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
4750NEK1NY-REN-55 | SRPS2 | SRPS2A | SRTD6NIMA related kinase 14q33CV:GWASdb
CV:PGCnp
7098TLR3CD283 | IIAE2toll like receptor 34q35CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
5562PRKAA1AMPK | AMPKa1protein kinase AMP-activated catalytic subunit alpha 15p12CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
3977LIFRCD118 | LIF-R | SJS2 | STWS | SWSleukemia inhibitory factor receptor alpha5p13-p12PMID:cooccur
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
9180OSMROSMRB | PLCA1oncostatin M receptor5p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
253260RICTORAVO3 | PIA | hAVO3RPTOR independent companion of MTOR, complex 25p13.1CV:PGCnp
PMID:cooccur
51663ZFRSPG71 | ZFR1zinc finger RNA binding protein5p13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
4883NPR3ANP-C | ANPR-C | ANPRC | C5orf23 | GUCY2B | NPR-C | NPRCnatriuretic peptide receptor 35p13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
170690ADAMTS16ADAMTS16sADAM metallopeptidase with thrombospondin type 1 motif 165p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
4651MYO10-myosin X5p15.1CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
651746ANKRD33B-ankyrin repeat domain 33B5p15.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9037SEMA5ASEMAF | semFsemaphorin 5A5p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
153129SLC38A9URLC11solute carrier family 38 member 95q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5144PDE4DACRDYS2 | DPDE3 | HSPDE4D | PDE43 | PDE4DN2 | STRK1phosphodiesterase 4D5q12CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
375449MAST4-microtubule associated serine/threonine kinase family member 45q12.3CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9765ZFYVE16PPP1R69zinc finger FYVE-type containing 165q14CV:PGCnp
DMG:Jaffe_2016
256987SERINC5C5orf12 | TPO1serine incorporator 55q14.1CV:PGCnp
GO_Annotation
83734ATG10APG10 | APG10L | pp12616autophagy related 105q14.1CV:PGCnp
9456HOMER1HOMER | HOMER1A | HOMER1B | HOMER1C | SYN47 | Ves-1homer scaffolding protein 15q14.2CV:PGCnp
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
116068LYSMD3-LysM domain containing 35q14.3CV:PGCnp
DMG:Jaffe_2016
153364MBLAC2-metallo-beta-lactamase domain containing 25q14.3CV:PGCnp
57561ARRDC3TLIMParrestin domain containing 35q14.3CV:PGCnp
4208MEF2CC5DELq14.3 | DEL5q14.3myocyte enhancer factor 2C5q14.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
22936ELL2-elongation factor for RNA polymerase II 25q15CV:PGCnp
DMG:Wockner_2014
Expression
4012LNPEPCAP | IRAP | P-LAP | PLAPleucyl/cystinyl aminopeptidase5q15CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
4163MCCMCC1mutated in colorectal cancers5q21CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
7903ST8SIA4PST | PST1 | SIAT8D | ST8SIA-IVST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 45q21CV:PGCnp
GO_Annotation
PMID:cooccur
23262PPIP5K2CFAP160 | HISPPD1 | IP7K2 | VIP2diphosphoinositol pentakisphosphate kinase 25q21.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1657DMXL1-Dmx like 15q22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
5229PGGT1BBGGI | GGTIprotein geranylgeranyltransferase type I subunit beta5q22.3CV:PGCnp
1456CSNK1G3CKI-gamma 3 | CSNK1G3Lcasein kinase 1 gamma 35q23CV:PGCnp
DMG:Nishioka_2013
6558SLC12A2BSC | BSC2 | NKCC1 | PPP1R141solute carrier family 12 member 25q23.3CV:PGCnp
GSMA_I
PMID:cooccur
23092ARHGAP26GRAF | GRAF1 | OPHN1L | OPHN1L1Rho GTPase activating protein 265q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
51294PCDH12VE-cadherin-2 | VECAD2protocadherin 125q31Expression
GO_Annotation
GSMA_I
PMID:cooccur
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
492311IGIPC5orf53IgA-inducing protein5q31CV:PGCnp
GSMA_I
11346SYNPO-synaptopodin5q33.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Potential synaptic genes
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
79646PANK3-pantothenate kinase 35q34CV:PGCnp
GSMA_IIA
1879EBF1COE1 | EBF | O/E-1 | OLF1early B-cell factor 15q34CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
7422VEGFAMVCD1 | VEGF | VPFvascular endothelial growth factor A6p12CV:PGCnp
DEG:Maycox_2009
GO_Annotation
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
53405CLIC5DFNB102 | DFNB103 | MST130 | MSTP130chloride intracellular channel 56p12.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
22875ENPP4NPP4ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)6p21.1CV:PGCnp
GSMA_IIE
23500DAAM2dJ90A20A.1dishevelled associated activator of morphogenesis 26p21.2Association
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
PMID:cooccur
4855NOTCH4INT3notch 46p21.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
63940GPSM3AGS4 | C6orf9 | G18 | G18.1a | G18.1b | G18.2 | NG1G-protein signaling modulator 36p21.3CV:GWASdb
CV:PGCnp
GSMA_I
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3304HSPA1BHSP70-1B | HSP70-2 | HSP70.2heat shock protein family A (Hsp70) member 1B6p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
3006HIST1H1CH1.2 | H1C | H1F2 | H1s-1histone cluster 1, H1c6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
5089PBX2G17 | HOX12 | PBX2MHCpre-B-cell leukemia homeobox 26p21.3CV:PGCnp
GSMA_I
8347HIST1H2BCH2B.1 | H2B/l | H2BFL | dJ221C16.3histone cluster 1, H2bc6p22.1CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
9750FAM65BC6orf32 | DFNB104 | DIFF40 | DIFF48 | MYONAP | PL48family with sequence similarity 65 member B6p22.3-p21.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
10048RANBP9BPM-L | BPM90 | RANBPM | RanBP7RAN binding protein 96p23CV:PGCnp
GSMA_I
Network
PMID:cooccur
1832DSPDCWHKTA | DPdesmoplakin6p24CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
3096HIVEP1CIRIP | CRYBP1 | GAAP | MBP-1 | PRDII-BF1 | Schnurri-1 | ZAS1 | ZNF40 | ZNF40Ahuman immunodeficiency virus type I enhancer binding protein 16p24-p22.3CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_I
CompositeSet
Darnell FMRP targets
3720JARID2JMJjumonji and AT-rich interaction domain containing 26p24-p23Association
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Ascano FMRP targets
Chromatin Remodeling Genes
4739NEDD9CAS-L | CAS2 | CASL | CASS2 | HEF1neural precursor cell expressed, developmentally down-regulated 96p24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
7280TUBB2ACDCBM5 | TUBB | TUBB2tubulin beta 2A class IIa6p25CV:PGCnp
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2296FOXC1ARA | FKHL7 | FREAC-3 | FREAC3 | IGDA | IHG1 | IRID1 | RIEG3forkhead box C16p25CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
6239RREB1FINB | HNT | LZ321 | RREB-1 | Zep-1ras responsive element binding protein 16p25CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
2762GMDSGMD | SDR3E1GDP-mannose 4,6-dehydratase6p25CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
GSMA_I
9425CDYLCDYL1chromodomain protein, Y-like6p25.1CV:PGCnp
GSMA_I
4646MYO6DFNA22 | DFNB37myosin VI6q13CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
55788LMBRD1C6orf209 | LMBD1 | MAHCF | NESILMBR1 domain containing 16q13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
26503SLC17A5AST | ISSD | NSD | SD | SIALIN | SIASD | SLDsolute carrier family 17 member 56q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4907NT5ECALJA | CD73 | E5NT | NT | NT5 | NTE | eN | eNT5'-nucleotidase ecto6q14-q21CV:GWASdb
CV:PGCnp
55754TMEM30AC6orf67 | CDC50Atransmembrane protein 30A6q14.1CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
83699SH3BGRL2-SH3 domain binding glutamate rich protein like 26q14.1CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
639PRDM1BLIMP1 | PRDI-BF1PR domain 16q21CV:PGCnp
DMG:Jaffe_2016
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
23493HEY2CHF1 | GRIDLOCK | GRL | HERP1 | HESR2 | HRT2 | bHLHb32hes related family bHLH transcription factor with YRPW motif 26q21CV:GWASdb
CV:PGCnp
GO_Annotation
2444FRKGTK | PTK5 | RAKfyn related Src family tyrosine kinase6q21-q22.3CV:PGCnp
DMG:Wockner_2014
4121MAN1A1HUMM3 | HUMM9 | MAN9mannosidase alpha class 1A member 16q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9439MED23ARC130 | CRSP130 | CRSP133 | CRSP3 | DRIP130 | MRT18 | SUR-2 | SUR2mediator complex subunit 236q22.33-q24.1CV:PGCnp
DMG:Jaffe_2016
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
7128TNFAIP3A20 | AISBL | OTUD7C | TNFA1P2TNF alpha induced protein 36q23CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
3097HIVEP2HIV-EP2 | MBP-2 | MIBP1 | SHN2 | ZAS2 | ZNF40Bhuman immunodeficiency virus type I enhancer binding protein 26q23-q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
6943TCF21POD1 | bHLHa23transcription factor 216q23.2CV:PGCnp
DMG:Jaffe_2016
57480PLEKHG1ARHGEF41pleckstrin homology and RhoGEF domain containing G16q25.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
79683ZDHHC14NEW1CPzinc finger DHHC-type containing 146q25.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
10846PDE10AHSPDE10Aphosphodiesterase 10A6q26CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
107ADCY1AC1 | DFNB44adenylate cyclase 1 (brain)7p12.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5814PURBPURBETApurine-rich element binding protein B7p13CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
222171PRR15-proline rich 157p14.3CV:GWASdb
CV:PGCnp
223082ZNRF2RNF202zinc and ring finger 2, E3 ubiquitin protein ligase7p14.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
644150WIPF3CR16WAS/WASL interacting protein family member 37p14.3CV:PGCnp
DMG:Wockner_2014
9771RAPGEF5GFR | MR-GEF | REPACRap guanine nucleotide exchange factor 57p15.3CV:PGCnp
GO_Annotation
Ascano FMRP targets
90693CCDC126-coiled-coil domain containing 1267p15.3CV:PGCnp
DMG:Jaffe_2016
113263GLCCI1FAM117C | GCTR | GIG18 | TSSN1glucocorticoid induced 17p21.3CV:PGCnp
DMG:Wockner_2014
84132USP42-ubiquitin specific peptidase 427p22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
948CD36BDPLT10 | CHDS7 | FAT | GP3B | GP4 | GPIV | PASIV | SCARB3CD36 molecule7q11.2CV:GWASdb
CV:PGCnp
PMID:cooccur
3092HIP1HIP-I | ILWEQ | SHON | SHONbeta | SHONgammahuntingtin interacting protein 17q11.23CV:PGCnp
DEG:Zhao_2015
GO_Annotation
Ascano FMRP targets
9863MAGI2ACVRIP1 | AIP-1 | AIP1 | ARIP1 | MAGI-2 | SSCAMmembrane associated guanylate kinase, WW and PDZ domain containing 27q21Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9723SEMA3EM-SEMAH | M-SemaK | SEMAH | coll-5semaphorin 3E7q21.11CV:GWASdb
CV:PGCnp
GO_Annotation
5243ABCB1ABC20 | CD243 | CLCS | GP170 | MDR1 | P-GP | PGY1ATP binding cassette subfamily B member 17q21.12Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
5445PON2-paraoxonase 27q21.3CV:GWASdb
CV:PGCnp
25851TECPR1-tectonin beta-propeller repeat containing 17q21.3CV:PGCnp
DMG:Wockner_2014
222255ATXN7L1ATXN7L4ataxin 7 like 17q22.3CV:PGCnp
83992CTTNBP2C7orf8 | CORTBP2 | Orf4cortactin binding protein 27q31CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
54556ING3Eaf4 | ING2 | MEAF4 | p47ING3inhibitor of growth family member 37q31CV:PGCnp
93986FOXP2CAGH44 | SPCH1 | TNRC10forkhead box P27q31Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
9732DOCK4-dedicator of cytokinesis 47q31.1CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
858CAV2CAVcaveolin 27q31.1CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
142685ASB15-ankyrin repeat and SOCS box containing 157q31.31CV:PGCnp
23554TSPAN12EVR5 | NET-2 | NET2 | TM4SF12tetraspanin 127q31.31CV:PGCnp
51631LUC7L2CGI-59 | CGI-74 | LUC7B2LUC7-like 2 pre-mRNA splicing factor7q34CV:PGCnp
Network
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
23608MKRN1RNF61makorin ring finger protein 17q34CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
155038GIMAP8IAN-9 | IAN6 | IAN9 | IANTGTPase, IMAP family member 87q36.1CV:PGCnp
DMG:Wockner_2014
Expression
10049DNAJB6DJ4 | DnaJ | HHDJ1 | HSJ-2 | HSJ2 | LGMD1D | LGMD1E | MRJ | MSJ-1DnaJ heat shock protein family (Hsp40) member B67q36.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6867TACC1Ga55transforming acidic coiled-coil containing protein 18p11.22CV:PGCnp
DMG:Wockner_2014
11030RBPMSHERMESRNA binding protein with multiple splicing8p12CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
5327PLATT-PA | TPAplasminogen activator, tissue type8p12CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
Potential synaptic genes
80005DOCK5-dedicator of cytokinesis 58p21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
64236PDLIM2MYSTIQUE | SLIMPDZ and LIM domain 28p21.3GSMA_I
GSMA_IIA
GSMA_IIE
23362PSD3EFA6D | EFA6R | HCA67pleckstrin and Sec7 domain containing 38p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
55790CSGALNACT1CSGalNAcT-1 | ChGn | beta4GalNAcTchondroitin sulfate N-acetylgalactosaminyltransferase 18p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
57509MTUS1ATBP | ATIP | ICIS | MP44 | MTSG1microtubule associated tumor suppressor 18p22CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
9788MTSS1MIM | MIMA | MIMBmetastasis suppressor 18p22CV:GWASdb
CV:PGCnp
GO_Annotation
10395DLC1ARHGAP7 | HP | STARD12 | p122-RhoGAPDLC1 Rho GTPase activating protein8p22CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
137492VPS37AHCRP1 | PQBP2 | SPG53VPS37A, ESCRT-I subunit8p22CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
1808DPYSL2CRMP-2 | CRMP2 | DHPRP2 | DRP-2 | DRP2 | N2A3 | ULIP-2 | ULIP2dihydropyrimidinase like 28p22-p21Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
83595SOX7-SRY-box 78p23.1CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
9172MYOM2TTNAPmyomesin 28p23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
115294PCMTD1-protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 18q11.23CV:PGCnp
8439NSMAFFAN | GRAMD5neutral sphingomyelinase activation associated factor8q12.1CV:PGCnp
DMG:Jaffe_2016
2669GEMKIRGTP binding protein overexpressed in skeletal muscle8q13-q21CV:PGCnp
PMID:cooccur
80243PREX26230420N16Rik | DEP.2 | DEPDC2 | P-REX2 | PPP1R129phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 28q13.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
2167FABP4A-FABP | AFABP | ALBP | HEL-S-104 | aP2fatty acid binding protein 48q21DNM:Fromer_2014
PMID:cooccur
CompositeSet
55824PAG1CBP | PAGphosphoprotein membrane anchor with glycosphingolipid microdomains 18q21.13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
54704PDP1PDH | PDP | PDPC | PPM2A | PPM2Cpyruvate dehyrogenase phosphatase catalytic subunit 18q22.1CV:PGCnp
DMG:Wockner_2014
9166EBAG9EB9 | PDAFestrogen receptor binding site associated, antigen, 98q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4982TNFRSF11BOCIF | OPG | PDB5 | TR1tumor necrosis factor receptor superfamily member 11b8q24CV:PGCnp
CV:PheWAS
157378TMEM65-transmembrane protein 658q24.13CV:GWASdb
CV:PGCnp
51571FAM49BBM-009 | L1family with sequence similarity 49 member B8q24.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7010TEKCD202B | TIE-2 | TIE2 | VMCM | VMCM1TEK receptor tyrosine kinase9p21CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
340485ACER2ALKCDase2 | ASAH3Lalkaline ceramidase 29p22.1CV:GWASdb
CV:PGCnp
6619SNAPC3PTFbeta | SNAP50small nuclear RNA activating complex polypeptide 39p22.3CV:GWASdb
CV:PGCnp
23081KDM4CGASC1 | JHDM3C | JMJD2C | TDRD14Clysine demethylase 4C9p24.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
79670ZCCHC6PAPD6 | TUT7zinc finger CCHC-type containing 69q21CV:PGCnp
Expression
23230VPS13ACHAC | CHOREINvacuolar protein sorting 13 homolog A (S. cerevisiae)9q21CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
23670TMEM2-transmembrane protein 29q21.13CV:PGCnp
DMG:Jaffe_2016
Expression
Ascano FMRP targets
301ANXA1ANX1 | LPC1annexin A19q21.13CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
53358SHC3N-Shc | NSHC | RAI | SHCCSHC (Src homology 2 domain containing) transforming protein 39q22.1CV:PGCnp
GO_Annotation
23196FAM120AC9orf10 | DNAPTP1 | DNAPTP5 | OSSAfamily with sequence similarity 120A9q22.31CV:PGCnpCompositeSet
Darnell FMRP targets
23299BICD2SMALED2 | bA526D8.1bicaudal D homolog 2 (Drosophila)9q22.31CV:GWASdb
CV:PGCnp
PMID:cooccur
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
84263HSDL2C9orf99 | SDR13C1hydroxysteroid dehydrogenase like 29q32CV:PGCnp
2934GSNADF | AGELgelsolin9q33CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
7099TLR4ARMD10 | CD284 | TLR-4 | TOLLtoll like receptor 49q33.1CV:PGCnp
PMID:cooccur
4010LMX1BLMX1.2 | NPS1LIM homeobox transcription factor 1 beta9q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
83543AIF1LC9orf58 | IBA2allograft inflammatory factor 1-like9q34.13-q34.3CV:PGCnp
6990DYNLT3RP3 | TCTE1L | TCTEX1Ldynein light chain Tctex-type 3Xp21CV:PGCnp
DEG:Zhao_2015
Potential synaptic genes
1536CYBBAMCBX2 | CGD | GP91-1 | GP91-PHOX | GP91PHOX | IMD34 | NOX2 | p91-PHOXcytochrome b-245, beta polypeptideXp21.1CV:PGCnp
DEG:Sanders_2013
1947EFNB1CFND | CFNS | EFB1 | EFL3 | EPLG2 | Elk-L | LERK2ephrin-B1Xq12CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
Network
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
538ATP7ADSMAX | MK | MNK | SMAX3ATPase copper transporting alphaXq21.1CV:PGCnp
GO_Annotation
PMID:cooccur
51566ARMCX3ALEX3 | GASP6 | dJ545K15.2armadillo repeat containing, X-linked 3Xq22.1CV:PGCnp
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
4168MCF2ARHGEF21 | DBLMCF.2 cell line derived transforming sequenceXq27CV:PGCnp
PMID:cooccur
Potential synaptic genes
203547VMA21MEAX | XMEAVMA21 vacuolar H+-ATPase homolog (S. cerevisiae)Xq28CV:GWASdb
CV:PGCnp
3423IDSMPS2 | SIDSiduronate 2-sulfataseXq28CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets