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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: DACH1

Summary

GeneID

1602

Symbol

DACH1

Synonyms

DACH|FLJ10138

Description

dachshund homolog 1 (Drosophila)

Locus tag

RP11-512J14.1

Gene type

protein-coding

Map location

13q22

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000166

nucleotide binding

IEA

GO:0003677

DNA binding

IEA

GO:0005515

protein binding

IPI

14525983

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

GO:0006350

transcription

IEA

GO:0007275

multicellular organismal development

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
EYA3	DKFZp686C132	eyes absent homolog 3 (Drosophila)	-	HPRD	14628042
NAGK	GNK \| HSA242910	N-acetylglucosamine kinase	Two-hybrid	BioGRID	16189514
NCOR1	KIAA1047 \| MGC104216 \| N-CoR \| TRAC1 \| hCIT529I10 \| hN-CoR	nuclear receptor co-repressor 1	-	HPRD	14525983
SIN3A	DKFZp434K2235 \| FLJ90319 \| KIAA0700	SIN3 homolog A, transcription regulator (yeast)	-	HPRD	14525983
SIX1	BOS3 \| DFNA23 \| TIP39	SIX homeobox 1	-	HPRD	14628042
SMAD3	DKFZp586N0721 \| DKFZp686J10186 \| HSPC193 \| HsT17436 \| JV15-2 \| MADH3 \| MGC60396	SMAD family member 3	-	HPRD	14525983
SMAD4	DPC4 \| JIP \| MADH4	SMAD family member 4	-	HPRD	14525983
UBE2I	C358B7.1 \| P18 \| UBC9	ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	-	HPRD,BioGRID	11025202

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
WATANABE_COLON_CANCER_MSI_VS_MSS_DN	81	42	All SZGR genes in this pathway
SENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_DN	175	82	All SZGR genes in this pathway
CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_UP	380	215	All SZGR genes in this pathway
DOANE_BREAST_CANCER_ESR1_UP	112	72	All SZGR genes in this pathway
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_6HR_UP	85	54	All SZGR genes in this pathway
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_8D_DN	205	127	All SZGR genes in this pathway
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_10D_DN	142	90	All SZGR genes in this pathway
MULLIGHAN_MLL_SIGNATURE_1_UP	380	236	All SZGR genes in this pathway
MULLIGHAN_MLL_SIGNATURE_2_UP	418	263	All SZGR genes in this pathway
GOZGIT_ESR1_TARGETS_DN	781	465	All SZGR genes in this pathway
CONCANNON_APOPTOSIS_BY_EPOXOMICIN_DN	172	112	All SZGR genes in this pathway
BEGUM_TARGETS_OF_PAX3_FOXO1_FUSION_UP	60	45	All SZGR genes in this pathway
FARMER_BREAST_CANCER_BASAL_VS_LULMINAL	330	215	All SZGR genes in this pathway
MARTORIATI_MDM4_TARGETS_NEUROEPITHELIUM_DN	164	111	All SZGR genes in this pathway
LIEN_BREAST_CARCINOMA_METAPLASTIC_VS_DUCTAL_DN	114	58	All SZGR genes in this pathway
KIM_MYC_AMPLIFICATION_TARGETS_UP	201	127	All SZGR genes in this pathway
YANG_BREAST_CANCER_ESR1_LASER_UP	34	25	All SZGR genes in this pathway
BENPORATH_SUZ12_TARGETS	1038	678	All SZGR genes in this pathway
BENPORATH_EED_TARGETS	1062	725	All SZGR genes in this pathway
BENPORATH_ES_WITH_H3K27ME3	1118	744	All SZGR genes in this pathway
BENPORATH_PRC2_TARGETS	652	441	All SZGR genes in this pathway
ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_DN	103	64	All SZGR genes in this pathway
ROSS_AML_WITH_MLL_FUSIONS	78	45	All SZGR genes in this pathway
HADDAD_T_LYMPHOCYTE_AND_NK_PROGENITOR_UP	78	56	All SZGR genes in this pathway
VERHAAK_AML_WITH_NPM1_MUTATED_DN	246	180	All SZGR genes in this pathway
CUI_TCF21_TARGETS_2_DN	830	547	All SZGR genes in this pathway
WANG_SMARCE1_TARGETS_UP	280	183	All SZGR genes in this pathway
KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN	911	527	All SZGR genes in this pathway
KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN	1011	592	All SZGR genes in this pathway
CAMPS_COLON_CANCER_COPY_NUMBER_UP	92	45	All SZGR genes in this pathway
SMID_BREAST_CANCER_RELAPSE_IN_BRAIN_DN	85	58	All SZGR genes in this pathway
SMID_BREAST_CANCER_LUMINAL_B_UP	172	109	All SZGR genes in this pathway
SMID_BREAST_CANCER_BASAL_DN	701	446	All SZGR genes in this pathway
BONOME_OVARIAN_CANCER_SURVIVAL_OPTIMAL_DEBULKING	246	152	All SZGR genes in this pathway
ROSS_LEUKEMIA_WITH_MLL_FUSIONS	78	49	All SZGR genes in this pathway
VALK_AML_CLUSTER_16	26	17	All SZGR genes in this pathway
VALK_AML_WITH_11Q23_REARRANGED	22	13	All SZGR genes in this pathway
POOLA_INVASIVE_BREAST_CANCER_DN	134	83	All SZGR genes in this pathway
HOSHIDA_LIVER_CANCER_LATE_RECURRENCE_DN	69	48	All SZGR genes in this pathway
YAGI_AML_WITH_T_9_11_TRANSLOCATION	130	87	All SZGR genes in this pathway
YAGI_AML_WITH_11Q23_REARRANGED	351	238	All SZGR genes in this pathway
JOHNSTONE_PARVB_TARGETS_2_DN	336	211	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-1/206	731	737	1A	hsa-miR-1	UGGAAUGUAAAGAAGUAUGUA
				hsa-miR-206^SZ	UGGAAUGUAAGGAAGUGUGUGG
				hsa-miR-613	AGGAAUGUUCCUUCUUUGCC
miR-132/212	2625	2631	1A	hsa-miR-212^SZ	UAACAGUCUCCAGUCACGGCC
miR-132/212	2625	2631	1A	hsa-miR-132^brain	UAACAGUCUACAGCCAUGGUCG
miR-134	966	972	1A	hsa-miR-134^brain	UGUGACUGGUUGACCAGAGGG
miR-138	430	436	1A	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-145	1326	1333	1A,m8	hsa-miR-145	GUCCAGUUUUCCCAGGAAUCCCUU
miR-15/16/195/424/497	260	266	m8	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-153	2397	2404	1A,m8	hsa-miR-153	UUGCAUAGUCACAAAAGUGA
miR-200bc/429	971	978	1A,m8	hsa-miR-200b	UAAUACUGCCUGGUAAUGAUGAC
				hsa-miR-200c	UAAUACUGCCGGGUAAUGAUGG
				hsa-miR-429	UAAUACUGUCUGGUAAAACCGU
miR-217	845	852	1A,m8	hsa-miR-217	UACUGCAUCAGGAACUGAUUGGAU
miR-221/222	1199	1205	m8	hsa-miR-221^brain	AGCUACAUUGUCUGCUGGGUUUC
miR-221/222	1199	1205	m8	hsa-miR-222^brain	AGCUACAUCUGGCUACUGGGUCUC
miR-23	2607	2613	m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	2607	2613	m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-30-3p	1155	1161	1A	hsa-miR-30a-3p	CUUUCAGUCGGAUGUUUGCAGC
miR-30-3p	1155	1161	1A	hsa-miR-30e-3p	CUUUCAGUCGGAUGUUUACAGC
miR-323	2607	2613	1A	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-326	195	201	1A	hsa-miR-326	CCUCUGGGCCCUUCCUCCAG
miR-33	2553	2559	1A	hsa-miR-33	GUGCAUUGUAGUUGCAUUG
miR-33	2553	2559	1A	hsa-miR-33b	GUGCAUUGCUGUUGCAUUGCA
miR-338	263	269	1A	hsa-miR-338^brain	UCCAGCAUCAGUGAUUUUGUUGA
miR-342	2609	2615	1A	hsa-miR-342^brain	UCUCACACAGAAAUCGCACCCGUC
miR-369-3p	2376	2382	1A	hsa-miR-369-3p	AAUAAUACAUGGUUGAUCUUU
miR-374	2376	2383	1A,m8	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-376	2442	2448	1A	hsa-miR-376a	AUCAUAGAGGAAAAUCCACGU
miR-376	2442	2448	1A	hsa-miR-376b	AUCAUAGAGGAAAAUCCAUGUU
miR-381	1035	1041	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-382	1994	2001	1A,m8	hsa-miR-382^brain	GAAGUUGUUCGUGGUGGAUUCG
miR-384	866	872	1A	hsa-miR-384	AUUCCUAGAAAUUGUUCAUA
miR-410	1721	1727	m8	hsa-miR-410	AAUAUAACACAGAUGGCCUGU
miR-448	2398	2404	1A	hsa-miR-448	UUGCAUAUGUAGGAUGUCCCAU
miR-493-5p	801	807	m8	hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
				hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
				hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
				hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
miR-496	947	954	1A,m8	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-505	9	15	1A	hsa-miR-505	GUCAACACUUGCUGGUUUCCUC
miR-543	2222	2228	1A	hsa-miR-543	AAACAUUCGCGGUGCACUUCU
miR-7	1637	1643	m8	hsa-miR-7^SZ	UGGAAGACUAGUGAUUUUGUUG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.