Search results: The pahtway p2429 has 1062 genes in the original annotation. Currently, there are 725 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
56288PARD3ASIP | Baz | PAR3 | PAR3alpha | PARD-3 | PARD3A | PPP1R118 | SE2-5L16 | SE2-5LT1 | SE2-5T2par-3 family cell polarity regulator10p11.21CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
Ascano FMRP targets
8325FZD8FZ-8 | hFZ8frizzled class receptor 810p11.21CV:PGCnp
DMG:Jaffe_2016
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
2572GAD2GAD65glutamate decarboxylase 210p11.23CV:PGCnp
GO_Annotation
Network
PMID:cooccur
283078MKXC10orf48 | IFRX | IRXL1mohawk homeobox10p12.1CV:PGCnp
256297PTF1APACA | PAGEN2 | PTF1-p48 | bHLHa29pancreas specific transcription factor, 1a10p12.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
105ADARB2ADAR3 | RED2adenosine deaminase, RNA specific B2 (inactive)10p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
5592PRKG1AAT8 | PKG | PRKG1B | PRKGR1B | cGK | cGK 1 | cGK1 | cGKI | cGKI-BETA | cGKI-alphaprotein kinase, cGMP-dependent, type I10q11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
240ALOX55-LO | 5-LOX | 5LPG | LOG5arachidonate 5-lipoxygenase10q11.2CV:PGCnp
DMG:Jaffe_2016
22943DKK1DKK-1 | SKdickkopf WNT signaling pathway inhibitor 110q11.2CV:PGCnp
PMID:cooccur
3363HTR75-HT75-hydroxytryptamine receptor 710q21-q24ADT:Sun_2012
Association
CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
CompositeSet
22891ZNF365Su48 | UAN | ZNF365Dzinc finger protein 36510q21.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Darnell FMRP targets
221037JMJD1CTRIP-8 | TRIP8jumonji domain containing 1C10q21.3CV:PGCnp
DMG:Wockner_2014
50674NEUROG3Atoh5 | Math4B | NGN-3 | bHLHa7 | ngn3neurogenin 310q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
2894GRID1GluD1glutamate ionotropic receptor delta type subunit 110q22Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
55118CRTAC1ASPIC | ASPIC1 | CEP-68cartilage acidic protein 110q22CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
64072CDH23CDHR23 | USH1Dcadherin-related 2310q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
84858ZNF503NOLZ-1 | NOLZ1 | Nlz2zinc finger protein 50310q22.2CV:PGCnp
3778KCNMA1BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1potassium calcium-activated channel subfamily M alpha 110q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1592CYP26A1CP26 | CYP26 | P450RAI | P450RAI1cytochrome P450 family 26 subfamily A member 110q23-q24CV:PGCnp
GO_Annotation
PMID:cooccur
60495HPSE2HPA2 | HPR2 | UFS | UFS1heparanase 2 (inactive)10q23-q24CV:GWASdb
CV:PGCnp
114815SORCS1hSorCSsortilin related VPS10 domain containing receptor 110q23-q25CV:GWASdb
CV:PGCnp
GO_Annotation
22986SORCS3SORCSsortilin related VPS10 domain containing receptor 310q23-q25CV:PGCnp
GO_Annotation
340665CYP26C1FFDD4cytochrome P450 family 26 subfamily C member 110q23.33CV:PGCnp
GO_Annotation
PMID:cooccur
5950RBP4MCOPCB10 | RDCCASretinol binding protein 410q23.33CV:PGCnp
PMID:cooccur
3087HHEXHEX | HMPH | HOX11L-PEN | PRH | PRHXhematopoietically expressed homeobox10q23.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
10660LBX1HPX-6 | HPX6 | LBX1H | homeoboxladybird homeobox 110q24CV:PGCnp
GO_Annotation
5076PAX2FSGS7 | PAPRSpaired box 210q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
159296NKX2-3CSX3 | NK2.3 | NKX2.3 | NKX2C | NKX4-3NK2 homeobox 310q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
26507CNNM1ACDP1 | CLP-1cyclin and CBS domain divalent metal cation transport mediator 110q24.2CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
5309PITX3ASMD | ASOD | CTPP4 | CTRCT11 | PTX3paired like homeodomain 310q24.32CV:PGCnp
GO_Annotation
PMID:cooccur
54805CNNM2ACDP2 | HOMG6 | HOMGSMRcyclin and CBS domain divalent metal cation transport mediator 210q24.32CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
LK:YES
PMID:cooccur
9118INANEF5 | NF-66 | TXBP-1internexin neuronal intermediate filament protein alpha10q24.33CV:PGCnp
GO_Annotation
LK:YES
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
6001RGS10-regulator of G-protein signaling 1010q25CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
150ADRA2AADRA2 | ADRA2R | ADRAR | ALPHA2AAR | ZNF32adrenoceptor alpha 2A10q25.2ADT:Sun_2012
CV:PGCnp
Network
PMID:cooccur
GPCR SIGNALLING
153ADRB1ADRB1R | B1AR | BETA1AR | RHRadrenoceptor beta 110q25.3ADT:Sun_2012
CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
84504NKX6-2GTX | NKX6.2 | NKX6BNK6 homeobox 210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
2018EMX2-empty spiracles homeobox 210q26.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2869GRK5GPRK5G protein-coupled receptor kinase 510q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
2674GFRA1GDNFR | GDNFRA | GFR-ALPHA-1 | RET1L | RETL1 | TRNR1GDNF family receptor alpha 110q26.11CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
5654HTRA1ARMD7 | CADASIL2 | CARASIL | HtrA | L56 | ORF480 | PRSS11HtrA serine peptidase 110q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
60529ALX4CRS5 | FND2ALX homeobox 411p11.2CV:PGCnp
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
6506SLC1A2EAAT2 | GLT-1 | HBGTsolute carrier family 1 member 211p13Association
CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
25841ABTB2ABTB2A | BTBD22ankyrin repeat and BTB domain containing 211p13CV:PGCnp
DMG:Nishioka_2013
26273FBXO3FBA | FBX3F-box protein 311p13CV:PGCnp
DMG:Wockner_2014
7490WT1AWT1 | EWS-WT1 | GUD | NPHS4 | WAGR | WIT-2 | WT33Wilms tumor 111p13CV:PGCnp
PMID:cooccur
5080PAX6AN | AN2 | D11S812E | FVH1 | MGDA | WAGRpaired box 611p13Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
406ARNTLBMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5aryl hydrocarbon receptor nuclear translocator like11p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
4004LMO1RBTN1 | RHOM1 | TTG1LIM domain only 111p15CV:GWASdb
CV:PGCnp
PMID:cooccur
89797NAV2HELAD1 | POMFIL2 | RAINB1 | STEERIN2 | UNC53H2neuron navigator 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
9152SLC6A5GLYT-2 | GLYT2 | HKPX3 | NET1solute carrier family 6 member 511p15.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
6833ABCC8ABC36 | HHF1 | HI | HRINS | MRP8 | PHHI | SUR | SUR1 | SUR1delta2 | TNDM2ATP binding cassette subfamily C member 811p15.1CV:GWASdb
CV:PGCnp
10418SPON1VSGP/F-spondin | f-spondinspondin 111p15.2CV:GWASdb
CV:PGCnp
PMID:cooccur
796CALCACALC1 | CGRP | CGRP-I | CGRP1 | CT | KC | PCTcalcitonin related polypeptide alpha11p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
56675NRIP3C11orf14 | NY-SAR-105nuclear receptor interacting protein 311p15.3CV:PGCnp
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
4654MYOD1MYF3 | MYOD | PUM | bHLHc1myogenic differentiation 111p15.4CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
3784KCNQ1ATFB1 | ATFB3 | JLNS1 | KCNA8 | KCNA9 | KVLQT1 | Kv1.9 | Kv7.1 | LQT | LQT1 | RWS | SQT2 | WRSpotassium voltage-gated channel subfamily Q member 111p15.5CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
PMID:cooccur
3481IGF2C11orf43 | GRDF | IGF-II | PP9974insulin like growth factor 211p15.5CV:PGCnp
PMID:cooccur
1815DRD4D4DRdopamine receptor D411p15.5ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
349667RTN4RL2NGRH1 | NgR2reticulon 4 receptor-like 211q12.1CV:PGCnp
GO_Annotation
50801KCNK4K2p4.1 | TRAAK | TRAAK1potassium two pore domain channel subfamily K member 411q13DMG:Wockner_2014
266743NPAS4Le-PAS | NXF | PASD10 | bHLHe79neuronal PAS domain protein 411q13CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
91683SYT12SYT11 | sytXIIsynaptotagmin 1211q13.2CV:PGCnp
GO_Annotation
EXOCYTOSIS
283212KLHL35-kelch like family member 3511q13.4DMG:Wockner_2014
7481WNT11HWNT11wingless-type MMTV integration site family member 1111q13.5CV:PGCnp
DMG:Jaffe_2016
25884CHRDL2BNF1 | CHL2chordin-like 211q14CV:PGCnp
2526FUT4CD15 | ELFT | FCT3A | FUC-TIV | FUTIV | LeX | SSEA-1fucosyltransferase 411q21CV:GWASdb
CV:PGCnp
5241PGRNR3C3 | PRprogesterone receptor11q22-q23CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
399947C11orf87LOH11CR1A | NEURIM1chromosome 11 open reading frame 8711q22.3CV:PGCnp
55531ELMOD1-ELMO domain containing 111q22.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
57453DSCAML1DSCAM2Down syndrome cell adhesion molecule like 111q23CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
CompositeSet
Darnell FMRP targets
57569ARHGAP20RARHOGAPRho GTPase activating protein 2011q23.1CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_I
CompositeSet
Darnell FMRP targets
7704ZBTB16PLZF | ZNF145zinc finger and BTB domain containing 1611q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
4684NCAM1CD56 | MSK39 | NCAMneural cell adhesion molecule 111q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10525HYOU1GRP-170 | Grp170 | HSP12A | ORP-150 | ORP150hypoxia up-regulated 111q23.1-q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
220323OAFNS5ATP13TP2out at first homolog11q23.3CV:PGCnp
GSMA_I
6330SCN4BATFB17 | LQT10 | Navbeta4sodium voltage-gated channel beta subunit 411q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
EXCITABILITY
84623KIRREL3KIRRE | MRD4 | NEPH2 | PRO4502kin of IRRE like 3 (Drosophila)11q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23584VSIG22210413P10Rik | CTH | CTXLV-set and immunoglobulin domain containing 211q24CV:PGCnp
64221ROBO3HGPPS | HGPS | RBIG1 | RIG1roundabout guidance receptor 311q24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
390275OR8A1OR11-318 | OST025olfactory receptor family 8 subfamily A member 111q24.2CV:PGCnp
63876PKNOX2PREP2PBX/knotted 1 homeobox 211q24.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
90952ESAMW117mendothelial cell adhesion molecule11q24.2CV:PGCnp
DNM:Xu_2012
GO_Annotation
CompositeSet
9638FEZ1UNC-76fasciculation and elongation protein zeta 111q24.2Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
170689ADAMTS15-ADAM metallopeptidase with thrombospondin type 1 motif 1511q25CV:PGCnp
DMG:Jaffe_2016
8538BARX2-BARX homeobox 211q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
341359SYT10-synaptotagmin 1012p11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6660SOX5L-SOX5 | L-SOX5B | L-SOX5F | LAMSHFSRY-box 512p12.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
79365BHLHE41BHLHB3 | DEC2 | SHARP1 | hDEC2basic helix-loop-helix family member e4112p12.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6489ST8SIA1GD3S | SIAT8 | SIAT8-A | SIAT8A | ST8SiaIST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 112p12.1-p11.2CV:PGCnp
Expression
121504HIST4H4H4/phistone cluster 4, H412p12.3CV:PGCnp
3736KCNA1AEMK | EA1 | HBK1 | HUK1 | KV1.1 | MBK1 | MK1 | RBK1potassium voltage-gated channel subfamily A member 112p13.32CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
EXCITABILITY
144165PRICKLE1EPM1B | RILPprickle planar cell polarity protein 112q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23416KCNH3BEC1 | ELK2 | Kv12.2potassium voltage-gated channel subfamily H member 312q13CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
7471WNT1BMND16 | INT1 | OI15wingless-type MMTV integration site family member 112q13CV:PGCnp
GO_Annotation
PMID:cooccur
50846DHHGDXYM | HHG-3 | SRXY7desert hedgehog12q13.1CV:PGCnp
PMID:cooccur
79022TMEM106C-transmembrane protein 106C12q13.1CV:PGCnp
1280COL2A1ANFH | AOM | COL11A3 | SEDC | STL1collagen type II alpha 112q13.11CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
79962DNAJC22wusDnaJ heat shock protein family (Hsp40) member C2212q13.12CV:PGCnp
3228HOXC12HOC3F | HOX3 | HOX3Fhomeobox C1212q13.13CV:PGCnp
DMG:Jaffe_2016
11247NXPH4NPH4neurexophilin 412q13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2583B4GALNT1GALGT | GALNACT | GalNAc-T | SPG26beta-1,4-N-acetyl-galactosaminyltransferase 112q13.3CV:PGCnp
DMG:Wockner_2014
3221HOXC4HOX3 | HOX3E | cp19homeobox C412q13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
3224HOXC8HOX3 | HOX3Ahomeobox C812q13.3GO_Annotation
PMID:cooccur
3225HOXC9HOX3 | HOX3Bhomeobox C912q13.3DMG:Jaffe_2016
3229HOXC13ECTD9 | HOX3 | HOX3Ghomeobox C1312q13.3CV:PGCnp
DMG:Jaffe_2016
56901NDUFA4L2NUOMSNADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 212q13.3CV:PGCnp
DMG:Wockner_2014
1594CYP27B1CP2B | CYP1 | CYP1alpha | CYP27B | P450c1 | PDDR | VDD1 | VDDR | VDDRI | VDRcytochrome P450 family 27 subfamily B member 112q14.1DMG:Wockner_2014
PMID:cooccur
11213IRAK3ASRT5 | IRAKMinterleukin 1 receptor associated kinase 312q14.3CV:PGCnp
DEG:Sanders_2013
DMG:Nishioka_2013
4618MYF6CNM3 | MRF4 | bHLHc4 | myf-6myogenic factor 612q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
8549LGR5FEX | GPR49 | GPR67 | GRP49 | HG38leucine-rich repeat containing G protein-coupled receptor 512q21.1CV:PGCnp
DMG:Wockner_2014
Expression
29953TRHDEPAP-II | PGPEP2 | TRH-DEthyrotropin releasing hormone degrading enzyme12q21.1CV:PGCnp
8092ALX1CART1 | FND3 | HEL23ALX homeobox 112q21.31CV:PGCnp
DMG:Wockner_2014
GO_Annotation
59277NTN4PRO3091netrin 412q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
429ASCL1ASH1 | HASH1 | MASH1 | bHLHa46achaete-scute family bHLH transcription factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
10154PLXNC1CD232 | PLXN-C1 | VESPRplexin C112q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
64211LHX5-LIM homeobox 512q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
6910TBX5HOST-box 512q24.1CV:PGCnp
DMG:Jaffe_2016
6926TBX3TBX3-ISO | UMS | XHLT-box 312q24.21CV:GWASdb
CV:PGCnp
8739HRKDP5 | HARAKIRIharakiri, BCL2 interacting protein12q24.22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
11211FZD10CD350 | FZ-10 | Fz10 | FzE7 | hFz10frizzled class receptor 1012q24.33CV:GWASdb
CV:PGCnp
2706GJB2CX26 | DFNA3 | DFNA3A | DFNB1 | DFNB1A | HID | KID | NSRD1 | PPKgap junction protein beta 213q11-q12CV:PGCnp
DMG:Wockner_2014
2835GPR12GPCR12 | GPCR21 | PPP1R84G protein-coupled receptor 1213q12CV:PGCnp
DMG:Wockner_2014
9365KL-klotho13q12CV:GWASdb
CV:PGCnp
PMID:cooccur
3651PDX1GSF | IDX-1 | IPF1 | IUF1 | MODY4 | PAGEN1 | PDX-1 | STF-1pancreatic and duodenal homeobox 113q12.1CV:PGCnp
PMID:cooccur
219409GSX1GSH1 | Gsh-1GS homeobox 113q12.2CV:PGCnp
PMID:cooccur
1045CDX2CDX-3 | CDX2/AS | CDX3caudal type homeobox 213q12.3DMG:Wockner_2014
4081MAB21L1CAGR1 | Nbla00126mab-21-like 1 (C. elegans)13q13PMID:cooccur
9201DCLK1CL1 | CLICK1 | DCAMKL1 | DCDC3A | DCLKdoublecortin like kinase 113q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
400120SERTM1C13orf36serine rich and transmembrane domain containing 113q13.3CV:GWASdb
CV:PGCnp
5100PCDH8ARCADLIN | PAPCprotocadherin 813q21.1Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
27253PCDH17PCDH68 | PCH68protocadherin 1713q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1602DACH1DACHdachshund family transcription factor 113q22CV:PGCnp
114798SLITRK1LRRC12 | TTMSLIT and NTRK like family member 113q31.1CV:PGCnp
GO_Annotation
PMID:cooccur
7546ZIC2HPE5Zic family member 213q32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
2262GPC5-glypican 513q32CV:GWASdb
CV:PGCnp
PMID:cooccur
266722HS6ST3HS6ST-3heparan sulfate 6-O-sulfotransferase 313q32.1CV:PGCnp
6656SOX1-SRY-box 113q34CV:PGCnp
GO_Annotation
PMID:cooccur
55795PCID2F10PCI domain containing 213q34CV:PGCnp
65110UPF3AHUPF3A | RENT3A | UPF3UPF3 regulator of nonsense transcripts homolog A (yeast)13q34CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
11035RIPK3RIP3receptor interacting serine/threonine kinase 314q11.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GSMA_I
Network
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
29091STXBP6HSPC156 | amisynsyntaxin binding protein 614q12CV:GWASdb
CV:PGCnp
Expression
GSMA_I
EXOCYTOSIS
2290FOXG1BF1 | BF2 | FHKL3 | FKH2 | FKHL1 | FKHL2 | FKHL3 | FKHL4 | FOXG1A | FOXG1B | FOXG1C | HBF-1 | HBF-2 | HBF-3 | HBF-G2 | HBF2 | HFK1 | HFK2 | HFK3 | KHL2 | QINforkhead box G114q13DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
6751SSTR1SRIF-2 | SS-1-R | SS1-R | SS1Rsomatostatin receptor 114q13CV:PGCnp
GO_Annotation
PMID:cooccur
7080NKX2-1BCH | BHC | NK-2 | NKX2.1 | NKX2A | NMTC1 | T/EBP | TEBP | TITF1 | TTF-1 | TTF1NK2 homeobox 114q13GO_Annotation
PMID:cooccur
145581LRFN5C14orf146 | FIGLER8 | SALM5leucine rich repeat and fibronectin type III domain containing 514q21.1CV:PGCnp
PMID:cooccur
161198CLEC14AC14orf27 | CEG1 | EGFR-5C-type lectin domain family 14 member A14q21.1CV:GWASdb
CV:PGCnp
114088TRIM9RNF91 | SPRINGtripartite motif containing 914q22.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
5015OTX2CPHD6 | MCOPS5orthodenticle homeobox 214q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
4990SIX6MCOPCT2 | ODRMD | OPTX2 | Six9SIX homeobox 614q23.1CV:PGCnp
DMG:Jaffe_2016
6547SLC8A3NCX3solute carrier family 8 member A314q24.1CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
8110DPF3BAF45C | CERD4double PHD fingers 314q24.2CV:PGCnp
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
22846VASH1KIAA1036vasohibin 114q24.3CV:PGCnp
DMG:Wockner_2014
9628RGS6GAPregulator of G-protein signaling 614q24.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
58157NGB-neuroglobin14q24.3CV:PGCnp
Network
PMID:cooccur
161436EML5EMAP-2echinoderm microtubule associated protein like 514q31.3CV:GWASdb
CV:PGCnp
PMID:cooccur
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
1735DIO35DIII | D3 | DIOIII | TXDI3deiodinase, iodothyronine, type III14q32CV:PGCnp
PMID:cooccur
145258GSCSAMSgoosecoid homeobox14q32.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79890RIN3-Ras and Rab interactor 314q32.12CV:PGCnp
DMG:Wockner_2014
123041SLC24A4AI2A5 | NCKX4 | SHEP6 | SLC24A2solute carrier family 24 member 414q32.12CV:PGCnp
CV:PheWAS
122416ANKRD9-ankyrin repeat domain 914q32.31CV:PGCnp
10914PAPOLAPAPpoly(A) polymerase alpha14q32.31CV:PGCnp
DMG:Wockner_2014
4948OCA2BEY | BEY1 | BEY2 | BOCA | D15S12 | EYCL | EYCL2 | EYCL3 | HCL3 | P | PED | SHEP1OCA2 melanosomal transmembrane protein15qCNV:YES
CV:PGCnp
DMG:Wockner_2014
6263RYR3RYR-3ryanodine receptor 315q13.3CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
54567DLL4AOS6 | hdelta2delta-like 4 (Drosophila)15q14CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
CompositeSet
10125RASGRP1CALDAG-GEFI | CALDAG-GEFII | RASGRP | V | hRasGRP1RAS guanyl releasing protein 115q14CV:GWASdb
CV:PGCnp
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
57369GJD2CX36 | GJA9gap junction protein delta 215q14CV:PGCnp
GO_Annotation
405753DUOXA2SIMNIPHOM | TDH5dual oxidase maturation factor 215q15.1DNM:Fromer_2014CompositeSet
4058LTKTYK1leukocyte receptor tyrosine kinase15q15.1-q21.1GO_Annotation
PMID:cooccur
90527DUOXA1NIP | NUMBIP | moldual oxidase maturation factor 115q21.1DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
80031SEMA6D-semaphorin 6D15q21.1CV:PGCnp
GO_Annotation
399694SHC4RaLP | SHCDSHC (Src homology 2 domain containing) family member 415q21.1-q21.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
7782SLC30A4ZNT4 | znT-4solute carrier family 30 member 415q21.1|15q21.1CV:PGCnp
PMID:cooccur
ION BALANCE
256586LYSMD2-LysM domain containing 215q21.2CV:PGCnp
DMG:Wockner_2014
3175ONECUT1HNF-6 | HNF6 | HNF6Aone cut homeobox 115q21.3CV:PGCnp
DMG:Wockner_2014
145741C2CD4AFAM148A | NLF1C2 calcium-dependent domain containing 4A15q22.2CV:PGCnp
CV:PheWAS
145773FAM81A-family with sequence similarity 81 member A15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
27023FOXB1FKH5 | HFKH-5forkhead box B115q22.2CV:PGCnp
DMG:Wockner_2014
64843ISL2-ISL LIM homeobox 215q23CV:PGCnp
53346TM6SF1-transmembrane 6 superfamily member 115q24-q26CV:PGCnp
646BNC1BNC | BSN1 | HsT19447basonuclin 115q25.2CV:PGCnp
8128ST8SIA2HsT19690 | SIAT8B | ST8SIA-II | STXST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 215q26Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_WM
PMID:cooccur
7026NR2F2ARP1 | CHTD4 | COUPTFB | COUPTFII | NF-E3 | NR2F1 | SVP40 | TFCOUP2nuclear receptor subfamily 2 group F member 215q26CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
5579PRKCBPKC-beta | PKCB | PRKCB1 | PRKCB2protein kinase C beta16p11.2CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6340SCNN1GBESC3 | ENaCg | ENaCgamma | PHA1 | SCNEGsodium channel epithelial 1 gamma subunit16p12CV:PGCnp
GSMA_IIE
10607TBL3SAZD | UTP13transducin (beta)-like 316p13.3CV:PGCnp
3039HBA1HBA-T3 | HBHhemoglobin subunit alpha 116p13.3CV:PGCnp
869CBLN1-cerebellin 1 precursor16q12.1CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
79191IRX3IRX-1 | IRXB1iroquois homeobox 316q12.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
10265IRX5HMMS | IRX-2a | IRXB2iroquois homeobox 516q12.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
4489MT1AMT1 | MT1S | MTCmetallothionein 1A16q13CV:PGCnp
DMG:Wockner_2014
4496MT1HMT-0 | MT-1H | MT-IH | MT1metallothionein 1H16q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4501MT1XMT-1l | MT1metallothionein 1X16q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
146225CMTM2CKLFSF2CKLF like MARVEL transmembrane domain containing 216q21CV:PGCnp
4094MAFAYGRP | CCA4 | CTRCT21 | c-MAFv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog16q22-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
51673TPPP3CGI-38 | TPPP/p20 | p20 | p25gammatubulin polymerization-promoting protein family member 316q22.1CV:PGCnp
DMG:Jaffe_2016
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
463ZFHX3ATBF1 | ATBT | ZNF927zinc finger homeobox 316q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
170692ADAMTS18ADAMTS21 | KNO2 | MMCATADAM metallopeptidase with thrombospondin type 1 motif 1816q23CV:PGCnp
DNM:Gulsuner_2013
10200MPHOSPH6MPP | MPP-6 | MPP6M-phase phosphoprotein 616q23.3CV:PGCnp
DMG:Jaffe_2016
Network
2294FOXF1ACDMPV | FKHL5 | FREAC1forkhead box F116q24DMG:Jaffe_2016
2300FOXL1FKH6 | FKHL11 | FREAC7forkhead box L116q24CV:GWASdb
CV:PGCnp
23174ZCCHC14BDG-29 | BDG29zinc finger CCHC-type containing 1416q24.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
388336SHISA6-shisa family member 617p12CV:PGCnp
5376PMP22CMT1A | CMT1E | DSS | GAS-3 | GAS3 | HMSNIA | HNPP | Sp110peripheral myelin protein 2217p12CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
58191CXCL16CXCLG16 | SR-PSOX | SRPSOXC-X-C motif chemokine ligand 1617p13PMID:cooccur
9423NTN1NTN1Lnetrin 117p13.1CV:GWASdb
CV:PGCnp
GO_Annotation
Ascano FMRP targets
162517FBXO39CT144 | Fbx39F-box protein 3917p13.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
51003MED313110004H13Rik | CGI-125 | Soh1mediator complex subunit 3117p13.1CV:PGCnp
DMG:Jaffe_2016
246ALOX1512-LOX | 15-LOX-1 | 15LOX-1arachidonate 15-lipoxygenase17p13.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
3090HIC1ZBTB29 | ZNF901 | hic-1hypermethylated in cancer 117p13.3CV:PGCnp
55803ADAP2CENTA2 | HSA272195 | cent-bArfGAP with dual PH domains 217q11.2CV:PGCnp
26574AATFBFR2 | CHE-1 | CHE1 | DEDapoptosis antagonizing transcription factor17q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
124842TMEM132EDFNB99transmembrane protein 132E17q12CV:PGCnpAscano FMRP targets
4761NEUROD2NDRF | bHLHa1neuronal differentiation 217q12CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
6928HNF1BFJHN | HNF-1-beta | HNF-1B | HNF1beta | HNF2 | HPC11 | LF-B3 | LFB3 | MODY5 | TCF-2 | TCF2 | VHNF1HNF1 homeobox B17q12CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1747DLX3AI4 | TDOdistal-less homeobox 317q21CV:PGCnp
DMG:Wockner_2014
4137MAPTDDPAC | FTDP-17 | MAPTL | MSTD | MTBT1 | MTBT2 | PPND | PPP1R103 | TAUmicrotubule associated protein tau17q21.1CV:PGCnp
CV:PheWAS
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
5697PYYPYY-I | PYY1peptide YY17q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10481HOXB13PSGDhomeobox B1317q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9001HAP1HAP2 | HIP5 | HLP | hHLP1huntingtin-associated protein 117q21.2-q21.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
3213HOXB3HOX2 | HOX2G | Hox-2.7homeobox B317q21.3CV:PGCnp
DMG:Wockner_2014
3218HOXB8HOX2 | HOX2D | Hox-2.4homeobox B817q21.3CV:PGCnp
DMG:Wockner_2014
2535FZD2Fz2 | fz-2 | fzE2 | hFz2frizzled class receptor 217q21.31CV:PGCnp
DMG:Jaffe_2016
1394CRHR1CRF-R | CRF-R-1 | CRF-R1 | CRF1 | CRFR-1 | CRFR1 | CRH-R-1 | CRH-R1 | CRHR | CRHR1Lcorticotropin releasing hormone receptor 117q21.31CV:PGCnp
PMID:cooccur
GPCR SIGNALLING
3212HOXB2HOX2 | HOX2H | Hox-2.8 | K8homeobox B217q21.32CV:PGCnp
DMG:Wockner_2014
30009TBX21T-PET | T-bet | TBET | TBLYMT-box 2117q21.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1748DLX4BP1 | DLX7 | DLX8 | DLX9 | OFC15distal-less homeobox 417q21.33CV:PGCnp
DMG:Wockner_2014
56934CA10CA-RPX | CARPX | HUCEP-15carbonic anhydrase X17q21.33CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
22843PPM1ECaMKP-N | POPX1 | PP2CH | caMKNprotein phosphatase, Mg2+/Mn2+ dependent 1E17q22CV:PGCnp
DNM:McCarthy_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
9241NOGSYM1 | SYNS1 | SYNS1Anoggin17q22CV:PGCnp
CV:PheWAS
GO_Annotation
8913CACNA1GCa(V)T.1 | Cav3.1 | NBR13 | SCA42calcium voltage-gated channel subunit alpha1 G17q22CV:PGCnpCompositeSet
Darnell FMRP targets
Potential synaptic genes
388407C17orf82-chromosome 17 open reading frame 8217q23.2CV:PGCnp
6909TBX2-T-box 217q23.2CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
4215MAP3K3MAPKKK3 | MEKK3mitogen-activated protein kinase kinase kinase 317q23.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
6752SSTR2-somatostatin receptor 217q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3759KCNJ2ATFB9 | HHBIRK1 | HHIRK1 | IRK1 | KIR2.1 | LQT7 | SQT3potassium voltage-gated channel subfamily J member 217q24.3CV:PGCnp
DEG:Zhao_2015
Network
10458BAIAP2BAP2 | FLAF3 | IRSP53BAI1 associated protein 217q25CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
8811GALR2GAL2-R | GALNR2 | GALR-2galanin receptor 217q25.3GO_Annotation
PMID:cooccur
4884NPTX1NP1neuronal pentraxin 117q25.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
Potential synaptic genes
57332CBX8PC3 | RC1chromobox 817q25.3DNM:Fromer_2014CompositeSet
Chromatin Remodeling Genes
116ADCYAP1PACAPadenylate cyclase activating polypeptide 1 (pituitary)18p11Association
CV:PGCnp
GO_Annotation
PMID:cooccur
1149CIDEACIDE-Acell death-inducing DFFA-like effector a18p11.21|18CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
81035COLEC12CLP1 | NSR2 | SCARA4 | SRCLcollectin subfamily member 1218p11.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9331B4GALT6B4Gal-T6 | beta4Gal-T6UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 618q11CV:PGCnp
PMID:cooccur
2627GATA6-GATA binding protein 618q11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8715NOL4CT125 | HRIHFB2255 | NOLPnucleolar protein 418q12CV:PGCnp
DMG:Jaffe_2016
1825DSC3CDHF3 | DSC | DSC1 | DSC2 | DSC4 | HT-CPdesmocollin 318q12.1CV:PGCnp
4645MYO5B-myosin VB18q21CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Potential synaptic genes
5596MAPK4ERK-4 | ERK4 | PRKM4 | p63-MAPK | p63MAPKmitogen-activated protein kinase 418q21.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
1630DCCCRC18 | CRCR1 | IGDCC1 | MRMV1 | NTN1R1DCC netrin 1 receptor18q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
596BCL2Bcl-2 | PPP1R50B-cell CLL/lymphoma 218q21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
9480ONECUT2OC-2 | OC2one cut homeobox 218q21.31CV:PGCnp
DMG:Jaffe_2016
147372CCBE1HKLLS1collagen and calcium binding EGF domains 118q21.32CV:GWASdb
CV:PGCnp
54877ZCCHC2C18orf49zinc finger CCHC-type containing 218q21.33CV:GWAScat
CV:PGCnp
220441RNF152-ring finger protein 15218q21.33CV:PGCnp
Expression
8792TNFRSF11ACD265 | FEO | LOH18CR1 | ODFR | OFE | OPTB7 | OSTS | PDB2 | RANK | TRANCERtumor necrosis factor receptor superfamily member 11a18q22.1CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
1005CDH7CDH7L1cadherin 718q22.1CV:GWASdb
CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
284273ZADH2-zinc binding alcohol dehydrogenase domain containing 218q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
25789TMEM59LBSMAP | C19orf4transmembrane protein 59 like19p12CV:PGCnp
DMG:Jaffe_2016
9244CRLF1CISS | CISS1 | CLF | CLF-1 | NR6 | zcytor5cytokine receptor-like factor 119p12CV:PGCnp
DMG:Wockner_2014
970CD70CD27L | CD27LG | TNFSF7 | TNLG8ACD70 molecule19p13CV:PGCnp
DMG:Jaffe_2016
1311COMPEDM1 | EPD1 | MED | PSACH | THBS5cartilage oligomeric matrix protein19p13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
83983TSSK6CT72 | FKSG82 | SSTK | TSSK4testis specific serine kinase 619p13.11CV:PGCnp
LK:YES
79852EPHX3ABHD9 | EH3epoxide hydrolase 319p13.12CV:PGCnp
1994ELAVL1ELAV1 | HUR | Hua | MelGELAV like RNA binding protein 119p13.2CV:PGCnp
51079NDUFA13B16.6 | CDA016 | CGI-39 | GRIM-19 | GRIM19NADH:ubiquinone oxidoreductase subunit A1319p13.2CV:PGCnp
LK:YES
CompositeSet
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
2193FARSACML33 | FARSL | FARSLA | FRSA | PheHAphenylalanyl-tRNA synthetase alpha subunit19p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
4784NFIXMRSHSS | NF1A | SOTOS2nuclear factor I/X (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
1938EEF2EEF-2 | EF-2 | EF2 | SCA26eukaryotic translation elongation factor 219p13.3DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
8175SF3A2PRP11 | PRPF11 | SAP62 | SF3a66splicing factor 3a subunit 219p13.3CV:PGCnp
55111PLEKHJ1GNRPXpleckstrin homology domain containing J119p13.3CV:PGCnp
5438POLR2IRPB9 | hRPB14.5polymerase (RNA) II subunit I19q12CV:PGCnp
DMG:Jaffe_2016
64377CHST8GALNAC4ST1 | GalNAc4ST | PSS3carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 819q13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
84079ANKRD27PP12899 | VARPankyrin repeat domain 2719q13.11CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
388531RGS9BPPERRS | R9AP | RGS9regulator of G-protein signaling 9 binding protein19q13.11CV:PGCnp
1155TBCBCG22 | CKAP1 | CKAPItubulin folding cofactor B19q13.11-q13.12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
4861NPAS1MOP5 | PASD5 | bHLHe11neuronal PAS domain protein 119q13.32CV:PGCnp
GO_Annotation
PMID:cooccur
9622KLK4AI2A1 | ARM1 | EMSP | EMSP1 | KLK-L1 | PRSS17 | PSTS | kallikreinkallikrein related peptidase 419q13.41CV:PGCnp
GO_Annotation
11338U2AF2U2AF65U2 small nuclear RNA auxiliary factor 219q13.42CV:PGCnp
DMG:Jaffe_2016
Network
3752KCND3BRGDA9 | KCND3L | KCND3S | KSHIVB | KV4.3 | SCA19 | SCA22potassium voltage-gated channel subfamily D member 31p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
57535KIAA1324EIG121KIAA13241p13.3CV:PGCnp
DMG:Wockner_2014
257ALX3FND | FND1ALX homeobox 31p13.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3738KCNA3HGK5 | HLK3 | HPCN3 | HUKIII | KV1.3 | MK3 | PCN3potassium voltage-gated channel subfamily A member 31p13.3CV:GWASdb
CV:PGCnp
GSMA_I
3749KCNC4C1orf30 | HKSHIIIC | KSHIIIC | KV3.4potassium voltage-gated channel subfamily C member 41p21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
EXCITABILITY
400765MIR137HG-MIR137 host gene1p21.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
PMID:cooccur
54112GPR88STRGG protein-coupled receptor 881p21.3CV:PGCnp
PMID:cooccur
2672GFI1GFI-1 | GFI1A | SCN2 | ZNF163growth factor independent 1 transcription repressor1p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
23576DDAH1DDAH | HEL-S-16dimethylarginine dimethylaminohydrolase 11p22CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
NEUROTRANSMITTER METABOLISM
CompositeSet
343472BARHL2-BarH like homeobox 21p22.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
55283MCOLN3TRP-ML3 | TRPML3mucolipin 31p22.3CV:PGCnp
81573ANKRD13CdJ677H15.3ankyrin repeat domain 13C1p31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
431707LHX8LHX7LIM homeobox 81p31.1CV:PGCnp
GSMA_IIA
PMID:cooccur
5733PTGER3EP3 | EP3-I | EP3-II | EP3-III | EP3-IV | EP3-VI | EP3e | PGE2-Rprostaglandin E receptor 31p31.2CV:PGCnp
GSMA_IIA
PMID:cooccur
79971WLSC1orf139 | EVI | GPR177 | MRP | mig-14wntless Wnt ligand secretion mediator1p31.3CV:PGCnp
GSMA_IIA
PMID:cooccur
27022FOXD3AIS1 | Genesis | HFH2 | VAMAS2forkhead box D31p31.3GSMA_IIA
PMID:cooccur
6886TAL1SCL | TCL5 | bHLHa17 | tal-1T-cell acute lymphocytic leukemia 11p32CV:PGCnp
PMID:cooccur
1298COL9A2DJ39G22.4 | EDM2 | MED | STL5collagen type IX alpha 21p33-p32CV:PGCnp
DMG:Wockner_2014
5453POU3F1OCT6 | OTF6 | SCIPPOU class 3 homeobox 11p34.1CV:PGCnp
GO_Annotation
PMID:cooccur
284716RIMKLAFAM80A | NAAGS | NAAGS-IIribosomal modification protein rimK-like family member A1p34.2CV:PGCnp
51440HPCAL4HLP4hippocalcin like 41p34.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
284654RSPO1CRISTIN3 | RSPOR-spondin 11p34.3CV:PGCnp
DMG:Jaffe_2016
2899GRIK3EAA5 | GLR7 | GLUR7 | GluK3 | GluR7aglutamate ionotropic receptor kainate type subunit 31p34.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
LIGAND GATED ION SIGNALING
CompositeSet
Darnell FMRP targets
Potential synaptic genes
353500BMP8A-bone morphogenetic protein 8a1p34.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
79693YRDCDRIP3 | IRIP | SUA5yrdC N(6)-threonylcarbamoyltransferase domain containing1p34.3CV:PGCnp
339488TFAP2EAP2Etranscription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)1p34.3CV:PGCnp
10076PTPRUFMI | PCP-2 | PTP | PTP-J | PTP-PI | PTP-RO | PTPPSI | PTPRO | PTPU2 | R-PTP-PSI | R-PTP-U | hPTP-Jprotein tyrosine phosphatase, receptor type U1p35.3CV:GWASdb
CV:PGCnp
Network
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
80818ZNF436ZNF | Zfp46zinc finger protein 4361p36DMG:Jaffe_2016
4985OPRD1OPRDopioid receptor, delta 11p36.1-p34.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
55629PNRC2-proline rich nuclear receptor coactivator 21p36.11DMG:Wockner_2014
163933FAM43B-family with sequence similarity 43 member B1p36.12CV:PGCnp
DMG:Wockner_2014
55450CAMK2N1PRO1489calcium/calmodulin-dependent protein kinase II inhibitor 11p36.12CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
6920TCEA3TFIIS | TFIIS.Htranscription elongation factor A31p36.12CV:GWASdb
CV:PGCnp
84966IGSF21-immunoglobin superfamily member 211p36.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
5081PAX7HUP1 | PAX7B | RMS2paired box 71p36.13CV:PGCnp
DMG:Wockner_2014
8718TNFRSF25APO-3 | DDR3 | DR3 | LARD | TNFRSF12 | TR3 | TRAMP | WSL-1 | WSL-LRtumor necrosis factor receptor superfamily member 251p36.2CV:PGCnp
Expression
7161TP73P73tumor protein p731p36.3CV:PGCnp
DMG:Wockner_2014
54626HES2bHLHb40hes family bHLH transcription factor 21p36.31CV:PGCnp
DMG:Wockner_2014
83715ESPNDFNB36 | LP2654espin1p36.31CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
1942EFNA1B61 | ECKLG | EFL1 | EPLG1 | LERK-1 | LERK1 | TNFAIP4ephrin-A11q21-q22CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
4914NTRK1MTC | TRK | TRK1 | TRKA | Trk-A | p140-TrkAneurotrophic tyrosine kinase, receptor, type 11q21-q22CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
3645INSRRIRRinsulin receptor-related receptor1q21-q23CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
200030NBPF11NBPF24neuroblastoma breakpoint family member 111q21.1CNV:YES
8337HIST2H2AA3H2A | H2A.2 | H2A/O | H2A/q | H2AFO | H2a-615 | HIST2H2AAhistone cluster 2, H2aa31q21.2DEG:Sanders_2013
GSMA_I
GSMA_IIA
3310HSPA6HSP70B'heat shock protein family A (Hsp70) member 61q23CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CompositeSet
25903OLFML2B-olfactomedin like 2B1q23.3CV:GWASdb
CV:PGCnp
GSMA_IIA
387597ILDR2C1orf32 | dJ782G3.1immunoglobulin like domain containing receptor 21q24.1CV:PGCnp
DMG:Jaffe_2016
460ASTN1ASTNastrotactin 11q25.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
777CACNA1EBII | CACH6 | CACNL1A6 | Cav2.3calcium voltage-gated channel subunit alpha1 E1q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
947CD34-CD34 molecule1q32CV:GWASdb
CV:PGCnp
PMID:cooccur
55733HHATMART2 | SKI1 | Sknhedgehog acyltransferase1q32CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7832BTG2PC3 | TIS21BTG family member 21q32CV:PGCnp
PMID:cooccur
5317PKP1B6Pplakophilin 11q32CV:PGCnp
DMG:Wockner_2014
83593RASSF5Maxp1 | NORE1 | NORE1A | NORE1B | RAPL | RASSF3Ras association domain family member 51q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
3756KCNH1EAG | EAG1 | Kv10.1 | TMBTS | ZLS1 | h-eag | hEAG1potassium voltage-gated channel subfamily H member 11q32.2CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
5362PLXNA2OCT | PLXN2plexin A21q32.2Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
467ATF3-activating transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
55509BATF3JDP1 | JUNDM1 | SNFTbasic leucine zipper ATF-like transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
3776KCNK2K2p2.1 | TPKC1 | TREK | TREK-1 | TREK1 | hTREK-1c | hTREK-1epotassium two pore domain channel subfamily K member 21q41CV:PGCnp
DMG:Jaffe_2016
Expression
89780WNT3A-wingless-type MMTV integration site family member 3A1q42CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
148641SLC35F3-solute carrier family 35 member F31q42.2CV:PGCnp
DMG:Wockner_2014
7056THBDAHUS6 | BDCA3 | CD141 | THPH12 | THRM | TMthrombomodulin20p11.2CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
4821NKX2-2NKX2.2 | NKX2BNK2 homeobox 220p11.22CV:PGCnp
GO_Annotation
PMID:cooccur
23236PLCB1EIEE12 | PI-PLC | PLC-154 | PLC-I | PLC-beta-1 | PLC154 | PLCB1A | PLCB1Bphospholipase C beta 120p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
6939TCF15EC2 | PARAXIS | bHLHa40transcription factor 15 (basic helix-loop-helix)20p13CV:GWAScat
CV:GWASdb
CV:PGCnp
171023ASXL1BOPS | MDSadditional sex combs like 1, transcriptional regulator20q11CV:PGCnp
DNM:Fromer_2014
CompositeSet
Chromatin Remodeling Genes
55741EDEM2C20orf31 | C20orf49 | bA4204.1ER degradation enhancer, mannosidase alpha-like 220q11.22CV:PGCnp
DNM:Xu_2012
CompositeSet
140679SLC32A1VGAT | VIAATsolute carrier family 32 member 120q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
11122PTPRTRPTPrhoprotein tyrosine phosphatase, receptor type T20q12-q13CV:PGCnpCompositeSet
Darnell FMRP targets
1591CYP24A1CP24 | CYP24 | HCAI | P450-CC24cytochrome P450 family 24 subfamily A member 120q13CV:PGCnp
PMID:cooccur
140689CBLN4CBLNL1cerebellin 4 precursor20q13CV:PGCnp
DMG:Nishioka_2013
2139EYA2EAB1EYA transcriptional coactivator and phosphatase 220q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
63925ZNF335MCPH10 | NIF-1 | NIF1 | NIF2zinc finger protein 33520q13.12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
28231SLCO4A1OATP-E | OATP1 | OATP4A1 | OATPE | OATPRP1 | POAT | SLC21A12solute carrier organic anion transporter family member 4A120q13.33CV:PGCnp
11096ADAMTS5ADAM-TS 11 | ADAM-TS 5 | ADAM-TS5 | ADAMTS-11 | ADAMTS-5 | ADAMTS11 | ADMP-2ADAM metallopeptidase with thrombospondin type 1 motif 521q21.3CV:PGCnp
DMG:Jaffe_2016
3763KCNJ6BIR1 | GIRK-2 | GIRK2 | KATP-2 | KATP2 | KCNJ7 | KIR3.2 | KPLBS | hiGIRK2potassium voltage-gated channel subfamily J member 621q22.1CV:PGCnp
DMG:Jaffe_2016
Network
CANABINOID
EXCITABILITY
SEROTONIN
116448OLIG1BHLHB6 | BHLHE21oligodendrocyte transcription factor 121q22.11CV:PGCnp
PMID:cooccur
2897GRIK1EAA3 | EEA3 | GLR5 | GLUR5 | GluK1 | gluR-5glutamate ionotropic receptor kainate type subunit 121q22.11CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
10215OLIG2BHLHB1 | OLIGO2 | PRKCBP2 | RACK17 | bHLHe19oligodendrocyte lineage transcription factor 221q22.11Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
874CBR3HEL-S-25 | SDR21C2 | hCBR3carbonyl reductase 321q22.2CV:PGCnpCompositeSet
150221RIMBP3CRIM-BP3.3 | RIMBP3.3RIMS binding protein 3C22q11.21CNV:YES
2928GSC2GSCLgoosecoid homeobox 222q11.21CNV:YES
CV:PGCnp
GSMA_I
85376RIMBP3RIM-BP3 | RIM-BP3.1 | RIM-BP3.A | RIMBP3.1 | RIMBP3ARIMS binding protein 322q11.21CNV:YES
440804RIMBP3BRIM-BP3.2 | RIM-BP3.B | RIMBP3.2RIMS binding protein 3B22q11.21CNV:YES
6899TBX1CAFS | CATCH22 | CTHM | DGCR | DGS | DORV | TBX1C | TGA | VCF | VCFST-box 122q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
29796UQCR10HSPC051 | HSPC119 | HSPC151 | QCR9 | UCCR7.2 | UCRCubiquinol-cytochrome c reductase, complex III subunit X22q12.2CV:PGCnp
GSMA_I
PMID:cooccur
1454CSNK1ECKIepsilon | HCKIEcasein kinase 1 epsilon22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3625INHBB-inhibin beta B2cen-q13CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
84913ATOH8HATH6 | bHLHa21atonal bHLH transcription factor 82p11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
347730LRRTM1-leucine rich repeat transmembrane neuronal 12p12GO_Annotation
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
925CD8ACD8 | Leu2 | MAL | p32CD8a molecule2p12CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
GSMA_I
1961EGR4NGFI-C | NGFIC | PAT133early growth response 42p13CV:PGCnp
Expression
PMID:cooccur
7039TGFATFGAtransforming growth factor alpha2p13CV:PGCnp
DMG:Montano_2016
Network
25806VAX2DRES93ventral anterior homeobox 22p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
5013OTX1-orthodenticle homeobox 12p13CV:PGCnp
GO_Annotation
PMID:cooccur
56603CYP26B1CYP26A2 | P450RAI-2 | P450RAI2 | RHFCAcytochrome P450 family 26 subfamily B member 12p13.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
25927CNRIP1C2orf32 | CRIP1cannabinoid receptor interacting protein 12p14CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GPCR SIGNALLING
98ACYP2ACYM | ACYPacylphosphatase 22p16.2CV:GWASdb
CV:PGCnp
56660KCNK12K2p12.1 | THIK-2 | THIK2potassium two pore domain channel subfamily K member 122p16.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
5581PRKCEPKCE | nPKC-epsilonprotein kinase C epsilon2p21CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2034EPAS1ECYT4 | HIF2A | HLF | MOP2 | PASD2 | bHLHe73endothelial PAS domain protein 12p21-p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1545CYP1B1CP1B | CYPIB1 | GLC3A | P4501B1cytochrome P450 family 1 subfamily B member 12p22.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
6716SRD5A2-steroid 5 alpha-reductase 22p23CV:PGCnp
PMID:cooccur
79745CLIP4RSNL2CAP-Gly domain containing linker protein family member 42p23.2CV:PGCnp
PMID:cooccur
7349UCNUI | UROCurocortin2p23.3DMG:Wockner_2014
GO_Annotation
PMID:cooccur
7781SLC30A3ZNT3solute carrier family 30 member 32p23.3CV:PGCnp
DEG:Maycox_2009
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.humanPSD
G2Cdb.humanPSP
130497OSR1ODDodd-skipped related transciption factor 12p24.1CV:PGCnp
PMID:cooccur
151354FAM84ANSE1 | PP11517family with sequence similarity 84 member A2p24.3DMG:Wockner_2014
4118MAL-mal T-cell differentiation protein2q11.1CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
3631INPP4AINPP4 | TVAS1inositol polyphosphate-4-phosphatase type I A2q11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6549SLC9A2NHE2solute carrier family 9 member A22q11.2CV:PGCnp
GSMA_I
200407CREG2-cellular repressor of E1A stimulated genes 22q11.2CV:PGCnp
GSMA_I
200350FOXD4L1FOXD5 | bA395L14.1forkhead box D4-like 12q13DMG:Jaffe_2016
GSMA_I
GSMA_IIA
6344SCTRSRsecretin receptor2q14.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
Potential synaptic genes
2019EN1-engrailed homeobox 12q14.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
84084RAB6CWTH3RAB6C, member RAS oncogene family2q21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
130074FAM168BMANIfamily with sequence similarity 168 member B2q21.1CV:PGCnp
9839ZEB2HSPC082 | SIP-1 | SIP1 | SMADIP1 | ZFHX1Bzinc finger E-box binding homeobox 22q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
10716TBR1TBR-1 | TES-56T-box, brain 12q24CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
130399ACVR1CACVRLK7 | ALK7activin A receptor type 1C2q24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
2571GAD1CPSQ1 | GAD | SCPglutamate decarboxylase 12q31Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
3231HOXD1HOX4 | HOX4G | Hox-4.7homeobox D12q31.1CV:PGCnp
3232HOXD3HOX1D | HOX4 | HOX4A | Hox-4.1homeobox D32q31.1CV:PGCnp
3233HOXD4HHO.C13 | HOX-5.1 | HOX4 | HOX4B | Hox-4.2homeobox D42q31.1CV:PGCnpPotential synaptic genes
3235HOXD9HOX4 | HOX4C | Hox-4.3 | Hox-5.2homeobox D92q31.1CV:PGCnp
DMG:Jaffe_2016
3237HOXD11HOX4 | HOX4Fhomeobox D112q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3238HOXD12HOX4Hhomeobox D122q31.1CV:PGCnp
3239HOXD13BDE | BDSD | HOX4I | SPDhomeobox D132q31.1CV:PGCnp
4036LRP2DBS | GP330LDL receptor related protein 22q31.1CV:PGCnp
GO_Annotation
GSMA_IIA
Network
PMID:cooccur
Ascano FMRP targets
1745DLX1-distal-less homeobox 12q32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
1746DLX2TES-1 | TES1distal-less homeobox 22q32CV:PGCnp
GO_Annotation
PMID:cooccur
4760NEUROD1BETA2 | BHF-1 | MODY6 | NEUROD | bHLHa3neuronal differentiation 12q32CV:PGCnp
GO_Annotation
Network
PMID:cooccur
2066ERBB4ALS19 | HER4 | p180erbB4erb-b2 receptor tyrosine kinase 42q33.3-q34Association
Core
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
Potential synaptic genes
8941CDK5R2NCK5AI | P39 | p39nck5aicyclin-dependent kinase 5, regulatory subunit 2 (p39)2q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
5077PAX3CDHS | HUP2 | WS1 | WS3paired box 32q35CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
54738FEVHSRNAFEV | PET-1FEV, ETS transcription factor2q36GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
9427ECEL1DA5D | DINE | ECEX | XCEendothelin converting enzyme-like 12q37.1CV:PGCnp
GO_Annotation
4880NPPCCNP | CNP2natriuretic peptide C2q37.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2637GBX2-gastrulation brain homeobox 22q37.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
60675PROK2BV8 | HH4 | KAL4 | MIT1 | PK2prokineticin 23p13CV:PGCnp
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
55164SHQ1GRIM-1 | Shq1pSHQ1, H/ACA ribonucleoprotein assembly factor3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
55079FEZF2FEZ | FEZL | FKSG36 | TOF | ZFP312 | ZNF312FEZ family zinc finger 23p14.2CV:PGCnp
GO_Annotation
PMID:cooccur
776CACNA1DCACH3 | CACN4 | CACNL1A2 | CCHL1A2 | Cav1.3 | PASNA | SANDDcalcium voltage-gated channel subunit alpha1 D3p14.3CV:PGCnp
PMID:cooccur
EXCITABILITY
SEROTONIN
CompositeSet
Potential synaptic genes
7476WNT7A-wingless-type MMTV integration site family member 7A3p25CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
6529SLC6A1GABATHG | GABATR | GAT1 | MAEsolute carrier family 6 member 13p25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
NEUROTRANSMITTER METABOLISM
CompositeSet
Darnell FMRP targets
2917GRM7GLUR7 | GPRC1G | MGLU7 | MGLUR7 | PPP1R87glutamate receptor, metabotropic 73p26.1-p25.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
7200TRHPro-TRH | TRFthyrotropin releasing hormone3q13.3-q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
6578SLCO2A1MATR1 | OATP2A1 | PGT | PHOAR2 | SLC21A2solute carrier organic anion transporter family member 2A13q21CV:PGCnp
2624GATA2DCML | IMD21 | MONOMAC | NFE1BGATA binding protein 23q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
PMID:cooccur
8403SOX14SOX28SRY-box 143q22-q23CV:PGCnp
CV:PheWAS
GO_Annotation
23129PLXND1PLEXD1plexin D13q22.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
2047EPHB1ELK | EPHT2 | Hek6 | NETEPH receptor B13q22.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
483ATP1B3ATPB-3 | CD298ATPase Na+/K+ transporting subunit beta 33q23CV:PGCnp
DMG:Wockner_2014
64084CLSTN2ALC-GAMMA | CDHR13 | CS2 | CSTN2 | alcagammacalsyntenin 23q23CV:GWASdb
CV:PGCnp
GO_Annotation
7545ZIC1CRS6 | ZIC | ZNF201Zic family member 13q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
84107ZIC4-Zic family member 43q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6474SHOX2OG12 | OG12X | SHOTshort stature homeobox 23q25.32CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
22865SLITRK3-SLIT and NTRK like family member 33q26.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7881KCNAB1AKR6A3 | KCNA1B | KV-BETA-1 | Kvb1.3 | hKvBeta3 | hKvb3potassium voltage-gated channel subfamily A member regulatory beta subunit 13q26.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
EXCITABILITY
2693GHSRGHDPgrowth hormone secretagogue receptor3q26.31CV:PGCnp
GO_Annotation
PMID:cooccur
2049EPHB3ETK2 | HEK2 | TYRO6EPH receptor B33q27.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
1608DGKGDAGK3 | DGK-GAMMAdiacylglycerol kinase gamma3q27.2-q27.3CV:GWASdb
CV:PGCnp
80235PIGZGPI-MT-IV | PIG-Z | SMP3phosphatidylinositol glycan anchor biosynthesis class Z3q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
201780SLC10A4P4solute carrier family 10 member 44p11CV:PGCnp
PMID:cooccur
2555GABRA2-gamma-aminobutyric acid type A receptor alpha2 subunit4p12CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
2557GABRA4-gamma-aminobutyric acid type A receptor alpha4 subunit4p12CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
8929PHOX2BNBLST2 | NBPhox | PMX2Bpaired like homeobox 2b4p12Association
CV:PGCnp
GO_Annotation
PMID:cooccur
3093UBE2KE2-25K | HIP2 | HYPG | LIG | UBC1ubiquitin conjugating enzyme E2 K4p14CV:PGCnp
PMID:cooccur
6649SOD3EC-SODsuperoxide dismutase 3, extracellular4p15.2CV:PGCnp
9353SLIT2SLIL3 | Slit-2slit guidance ligand 24p15.2CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
Ascano FMRP targets
Potential synaptic genes
254251LCORLMLR1ligand dependent nuclear receptor corepressor like4p15.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
57537SORCS2-sortilin related VPS10 domain containing receptor 24p16.1CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GO_Annotation
1816DRD5DBDR | DRD1B | DRD1L2dopamine receptor D54p16.1ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
DOPAMINE
4487MSX1ECTD3 | HOX7 | HYD1 | STHAG1msh homeobox 14p16.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
55351STK32BHSA250839 | STK32 | STKG6 | YANK2serine/threonine kinase 32B4p16.2CV:GWASdb
CV:PGCnp
57732ZFYVE28LST2 | LYST2zinc finger FYVE-type containing 284p16.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
170825GSX2GSH2GS homeobox 24q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
132946ARL9-ADP ribosylation factor like GTPase 94q12CV:PGCnp
3490IGFBP7AGM | FSTL2 | IBP-7 | IGFBP-7 | IGFBP-7v | IGFBPRP1 | MAC25 | PSF | RAMSVPS | TAFinsulin like growth factor binding protein 74q12CV:PGCnp
DMG:Wockner_2014
2044EPHA5CEK7 | EHK-1 | EHK1 | EK7 | HEK7 | TYRO4EPH receptor A54q13.1CV:PGCnp
CV:PheWAS
25849PARM1Cipar1 | DKFZP564O0823 | PARM-1 | WSC4prostate androgen-regulated mucin-like protein 14q13.3-q21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
651BMP3BMP-3Abone morphogenetic protein 34q21CV:PGCnp
DMG:Jaffe_2016
2250FGF5HBGF-5 | Smag-82 | TCMGLYfibroblast growth factor 54q21CV:PGCnp
GO_Annotation
8633UNC5CUNC5H3unc-5 netrin receptor C4q21-q23CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
255119C4orf22-chromosome 4 open reading frame 224q21.21CV:PGCnp
DMG:Wockner_2014
79966SCD5ACOD4 | FADS4 | HSCD5 | SCD2 | SCD4stearoyl-CoA desaturase 54q21.22CV:PGCnp
DEG:Zhao_2015
Expression
4825NKX6-1NKX6.1 | NKX6ANK6 homeobox 14q21.33CV:PGCnp
GO_Annotation
PMID:cooccur
658BMPR1BALK-6 | ALK6 | AMDD | BDA1D | BDA2 | CDw293bone morphogenetic protein receptor type 1B4q22-q24CV:PGCnp
CV:PheWAS
DMG:Montano_2016
GO_Annotation
Network
255743NPNTEGFL6L | POEMnephronectin4q24CV:GWASdb
CV:PGCnp
54790TET2KIAA1546 | MDStet methylcytosine dioxygenase 24q24CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
84570COL25A1AMY | CFEOM5 | CLAC | CLAC-P | CLACPcollagen type XXV alpha 14q25CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
5308PITX2ARP1 | Brx1 | IDG2 | IGDS | IGDS2 | IHG2 | IRID2 | Otlx2 | PTX2 | RGS | RIEG | RIEG1 | RSpaired like homeodomain 24q25CV:PGCnp
PMID:cooccur
63973NEUROG2Atoh4 | Math4A | NGN2 | bHLHa8 | ngn-2neurogenin 24q25DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
27123DKK2DKK-2dickkopf WNT signaling pathway inhibitor 24q25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
84109QRFPRAQ27 | GPR103 | SP9155pyroglutamylated RFamide peptide receptor4q27CV:PGCnp
PMID:cooccur
80854SETD7KMT7 | SET7 | SET7/9 | SET9SET domain containing lysine methyltransferase 74q28CV:PGCnpChromatin Remodeling Genes
7350UCP1SLC25A7 | UCPuncoupling protein 1 (mitochondrial, proton carrier)4q28-q31CV:PGCnp
GO_Annotation
PMID:cooccur
64399HHIPHIPhedgehog interacting protein4q28-q32CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
57575PCDH10OL-PCDH | PCDH19protocadherin 104q28.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
54798DCHS2CDH27 | CDHJ | CDHR7 | PCDH23 | PCDHJdachsous cadherin-related 24q31.3CV:PGCnp
DNM:Fromer_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
2891GRIA2GLUR2 | GLURB | GluA2 | GluR-K2 | HBGR2glutamate ionotropic receptor AMPA type subunit 24q32.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2982GUCY1A3GC-SA3 | GUC1A3 | GUCA3 | GUCSA3 | GUCY1A1 | MYMY6guanylate cyclase 1, soluble, alpha 34q32.1CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
4886NPY1RNPY1-R | NPYRneuropeptide Y receptor Y14q32.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
50859SPOCK3HSAJ1454 | TES-3 | TICN3sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 34q32.3CV:PGCnp
2690GHRGHBP | GHIPgrowth hormone receptor5p13-p12CV:PGCnp
PMID:cooccur
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
2668GDNFATF1 | ATF2 | HFB1-GDNF | HSCR3glial cell derived neurotrophic factor5p13.1-p12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
23037PDZD2AIPC | PAPIN | PDZK3 | PIN1PDZ domain containing 25p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
4883NPR3ANP-C | ANPR-C | ANPRC | C5orf23 | GUCY2B | NPR-C | NPRCnatriuretic peptide receptor 35p13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1501CTNND2GT24 | NPRAPcatenin delta 25p15.2CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
50805IRX4IRXA3iroquois homeobox 45p15.3CV:PGCnp
DMG:Jaffe_2016
6531SLC6A3DAT | DAT1 | PKDYSsolute carrier family 6 member 35p15.3ADT:Sun_2012
Association
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
6550SLC9A3NHE-3 | NHE3solute carrier family 9 member A35p15.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3350HTR1A5-HT-1A | 5-HT1A | 5HT1a | ADRB2RL1 | ADRBRL1 | G-21 | PFMCD5-hydroxytryptamine receptor 1A5q12.3ADT:Sun_2012
Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
SEROTONIN
23440OTP-orthopedia homeobox5q13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
1393CRHBPCRF-BP | CRFBPcorticotropin releasing hormone binding protein5q13.3CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
64097EPB41L4AEPB41L4 | NBL4erythrocyte membrane protein band 4.1 like 4A5q21.3CV:GWASdb
CV:PGCnp
4762NEUROG1AKA | Math4C | NEUROD3 | bHLHa6 | ngn1neurogenin 15q23-q31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
4015LOX-lysyl oxidase5q23.2DMG:Wockner_2014
PMID:cooccur
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
134549SHROOM1APXL2shroom family member 15q31.1DMG:Jaffe_2016
DNM:Fromer_2014
Expression
GSMA_I
CompositeSet
9542NRG2DON1 | HRG2 | NTAKneuregulin 25q31.2Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_WM
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
84249PSD2EFA6Cpleckstrin and Sec7 domain containing 25q31.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
GSMA_I
5459POU4F3BRN3C | DFNA15POU class 4 homeobox 35q32CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
9421HAND1Hxt | Thing1 | bHLHa27 | eHandheart and neural crest derivatives expressed 15q33CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
2561GABRB2-gamma-aminobutyric acid type A receptor beta2 subunit5q34Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
1482NKX2-5CHNG5 | CSX | CSX1 | HLHS2 | NKX2.5 | NKX2E | NKX4-1 | VSD3NK2 homeobox 55q34CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
1879EBF1COE1 | EBF | O/E-1 | OLF1early B-cell factor 15q34CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
8614STC2STC-2 | STCRPstanniocalcin 25q35.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
30012TLX3HOX11L2 | RNXT-cell leukemia homeobox 35q35.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
4488MSX2CRS2 | FPP | HOX8 | MSH | PFM | PFM1msh homeobox 25q35.2CV:PGCnp
GSMA_IIA
PMID:cooccur
81786TRIM7GNIP | RNF90tripartite motif containing 75q35.3CV:PGCnp
DMG:Wockner_2014
53917RAB24-RAB24, member RAS oncogene family5q35.3CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
INTRACELLULAR TRAFFICKING
7021TFAP2BAP-2B | AP2-Btranscription factor AP-2 beta (activating enhancer binding protein 2 beta)6p12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
83741TFAP2DTFAP2BL1transcription factor AP-2 delta (activating enhancer binding protein 2 delta)6p12.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIE
CompositeSet
53405CLIC5DFNB102 | DFNB103 | MST130 | MSTP130chloride intracellular channel 56p12.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
266727MDGA1GPIM | MAMDC3MAM domain containing glycosylphosphatidylinositol anchor 16p21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIE
PMID:cooccur
860RUNX2AML3 | CBF-alpha-1 | CBFA1 | CCD | CCD1 | CLCD | OSF-2 | OSF2 | PEA2aA | PEBP2aArunt related transcription factor 26p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
7941PLA2G7LDL-PLA2 | LP-PLA2 | PAFAD | PAFAHphospholipase A2 group VII6p21.2-p12CV:PGCnp
GSMA_IIE
PMID:cooccur
57497LRFN2FIGLER2 | KIAA1246 | SALM1leucine rich repeat and fibronectin type III domain containing 26p21.2-p21.1CV:PGCnp
GSMA_I
GSMA_IIE
Potential synaptic genes
3106HLA-BAS | Bw-47 | Bw-50 | HLAB | SPDA1major histocompatibility complex, class I, B6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
Network
PMID:cooccur
3107HLA-CD6S204 | HLA-JY3 | HLAC | HLC-C | PSORS1major histocompatibility complex, class I, C6p21.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_I
Network
PMID:cooccur
CompositeSet
3135HLA-GMHC-Gmajor histocompatibility complex, class I, G6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
5514PPP1R10CAT53 | FB19 | PNUTS | PP1R10 | R111 | p99protein phosphatase 1 regulatory subunit 106p21.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
222663SCUBE3CEGF3signal peptide, CUB domain and EGF like domain containing 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
4277MICBPERB11.2MHC class I polypeptide-related sequence B6p21.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_COR
GR_WM
GSMA_I
PMID:cooccur
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3304HSPA1BHSP70-1B | HSP70-2 | HSP70.2heat shock protein family A (Hsp70) member 1B6p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
3305HSPA1LHSP70-1L | HSP70-HOM | HSP70T | hum70theat shock protein family A (Hsp70) member 1 like6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
6890TAP1ABC17 | ABCB2 | APT1 | D6S114E | PSF-1 | PSF1 | RING4 | TAP1*0102N | TAP1Ntransporter 1, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
10255HCG9HCGIX | HCGIX4HLA complex group 9 (non-protein coding)6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
28973MRPS18BC6orf14 | HSPC183 | HumanS18a | MRP-S18-2 | MRPS18-2 | PTD017 | S18amtmitochondrial ribosomal protein S18B6p21.3DMG:Jaffe_2016
GSMA_I
3105HLA-AAw-33 | Aw-74 | HLAAmajor histocompatibility complex, class I, A6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
85235HIST1H2AHH2A/S | H2AFALii | H2AH | dJ86C11.1histone cluster 1, H2ah6p21.33CV:PGCnp
GSMA_I
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
8294HIST1H4IH4/m | H4FM | H4Mhistone cluster 1, H4i6p21.33DNM:Fromer_2014
GSMA_I
CompositeSet
8330HIST1H2AKH2A/d | H2AFDhistone cluster 1, H2ak6p22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8969HIST1H2AGH2A.1b | H2A/p | H2AFP | H2AG | pH2A/fhistone cluster 1, H2ag6p22.1CV:PGCnp
DNM:Xu_2012
Expression
GSMA_I
CompositeSet
8332HIST1H2ALH2A.i | H2A/i | H2AFI | dJ193B12.9histone cluster 1, H2al6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8336HIST1H2AMH2A.1 | H2A/n | H2AFN | dJ193B12.1histone cluster 1, H2am6p22.1Expression
GSMA_I
8340HIST1H2BLH2B/c | H2BFC | dJ97D16.4histone cluster 1, H2bl6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8348HIST1H2BOH2B.2 | H2B/n | H2BFN | dJ193B12.2histone cluster 1, H2bo6p22.1CV:PGCnp
GSMA_I
8351HIST1H3DH3/b | H3FBhistone cluster 1, H3d6p22.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
8354HIST1H3IH3.f | H3/f | H3FFhistone cluster 1, H3i6p22.1CV:PGCnp
GSMA_I
8356HIST1H3JH3/j | H3FJhistone cluster 1, H3j6p22.1CV:PGCnp
GSMA_I
8357HIST1H3HH3/k | H3F1K | H3FKhistone cluster 1, H3h6p22.1CV:PGCnp
GSMA_I
8362HIST1H4KH4/d | H4F2iii | H4FD | dJ160A22.1histone cluster 1, H4k6p22.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8363HIST1H4JH4/e | H4F2iv | H4FE | dJ160A22.2histone cluster 1, H4j6p22.1CV:PGCnp
GSMA_I
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8365HIST1H4HH4/h | H4FHhistone cluster 1, H4h6p22.1CV:PGCnp
GSMA_I
8368HIST1H4LH4.k | H4/k | H4FKhistone cluster 1, H4l6p22.1CV:PGCnp
GSMA_I
8968HIST1H3FH3/i | H3FIhistone cluster 1, H3f6p22.2GSMA_I
8350HIST1H3AH3/A | H3FAhistone cluster 1, H3a6p22.2GSMA_I
8352HIST1H3CH3.1 | H3/c | H3FChistone cluster 1, H3c6p22.2CV:PGCnp
GSMA_I
8353HIST1H3EH3.1 | H3/d | H3FDhistone cluster 1, H3e6p22.2CV:PGCnp
GSMA_I
8355HIST1H3GH3/h | H3FHhistone cluster 1, H3g6p22.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
8358HIST1H3BH3/l | H3FLhistone cluster 1, H3b6p22.2CV:PGCnp
GSMA_I
8359HIST1H4AH4FAhistone cluster 1, H4a6p22.2CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
8360HIST1H4DH4/b | H4FB | dJ221C16.9histone cluster 1, H4d6p22.2CV:PGCnp
GSMA_I
8361HIST1H4FH4 | H4/c | H4FChistone cluster 1, H4f6p22.2CV:PGCnp
GSMA_I
8366HIST1H4BH4/I | H4FIhistone cluster 1, H4b6p22.2CV:PGCnp
GSMA_I
8367HIST1H4EH4/j | H4FJhistone cluster 1, H4e6p22.2CV:PGCnp
GSMA_I
221662RBM24RNPC6 | dJ259A10.1RNA binding motif protein 246p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
1832DSPDCWHKTA | DPdesmoplakin6p24CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
654BMP6VGR | VGR1bone morphogenetic protein 66p24-p23CV:PGCnp
GSMA_I
PMID:cooccur
54898ELOVL2SSC2ELOVL fatty acid elongase 26p24.2CV:PGCnp
GSMA_I
PMID:cooccur
2296FOXC1ARA | FKHL7 | FREAC-3 | FREAC3 | IGDA | IHG1 | IRID1 | RIEG3forkhead box C16p25CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
94234FOXQ1HFH1forkhead box Q16p25CV:PGCnp
GSMA_I
PMID:cooccur
51299NRN1NRN | dJ380B8.2neuritin 16p25.1CV:PGCnp
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
2295FOXF2FKHL6 | FREAC-2 | FREAC2forkhead box F26p25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
23469PHF3-PHD finger protein 36q12CV:PGCnp
3351HTR1B5-HT-1B | 5-HT-1D-beta | 5-HT1B | 5-HT1DB | HTR1D2 | HTR1DB | S125-hydroxytryptamine receptor 1B6q13ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
SEROTONIN
56479KCNQ5Kv7.5potassium voltage-gated channel subfamily Q member 56q14CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
3354HTR1E5-HT1E5-hydroxytryptamine receptor 1E6q14-q15ADT:Sun_2012
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
9892SNAP91AP180 | CALMsynaptosome associated protein 91kDa6q14.2CV:PGC128
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
60468BACH2BTBD25BTB domain and CNC homolog 26q15CV:PGCnp
5454POU3F2BRN2 | N-Oct3 | OCT7 | OTF-7 | OTF7 | POUF3 | brn-2 | oct-7POU class 3 homeobox 26q16CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
84539MCHR2GPR145 | GPRv17 | MCH-2R | MCH-R2 | MCH2 | MCH2R | MCHR-2 | SLTmelanin concentrating hormone receptor 26q16CV:PGCnp
PMID:cooccur
59336PRDM13MU-MB-20.220 | PFM10PR domain 136q16.2CV:PGCnp
DMG:Wockner_2014
6492SIM1bHLHe14single-minded family bHLH transcription factor 16q16.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
2830GPR6-G protein-coupled receptor 66q21CV:PGCnp
PMID:cooccur
154215NKAIN2FAM77B | NKAIP2 | TCBA | TCBA1Na+/K+ transporting ATPase interacting 26q21CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
7101NR2E1TLL | TLX | XTLLnuclear receptor subfamily 2 group E member 16q21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
11149BVESHBVES | LGMD2X | POP1 | POPDC1blood vessel epicardial substance6q21CV:PGCnp
DMG:Wockner_2014
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
222546RFX6MTCHRS | MTFS | RFXDC1 | dJ955L16.1regulatory factor X66q22.1CV:PGCnp
DMG:Wockner_2014
245806VGLL2VGL2 | VITO1vestigial like family member 26q22.1CV:PGCnp
DMG:Wockner_2014
84870RSPO3CRISTIN1 | PWTSR | THSD2R-spondin 36q22.33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4217MAP3K5ASK1 | MAPKKK5 | MEKK5mitogen-activated protein kinase kinase kinase 56q22.33CV:PGCnp
DMG:Jaffe_2016
Network
Ascano FMRP targets
6943TCF21POD1 | bHLHa23transcription factor 216q23.2CV:PGCnp
DMG:Jaffe_2016
26002MOXD1MOX | PRO5780 | dJ248E1.1monooxygenase, DBH-like 16q23.2CV:PGCnp
DEG:Sanders_2013
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
10981RAB32-RAB32, member RAS oncogene family6q24.3CV:PGCnp
DMG:vanEijk_2014
81706PPP1R14CCPI17-like | KEPI | NY-BR-81protein phosphatase 1 regulatory inhibitor subunit 14C6q24.3-q25.3CV:GWASdb
CV:PGCnp
6581SLC22A3EMT | EMTH | OCT3solute carrier family 22 member 36q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
10846PDE10AHSPDE10Aphosphodiesterase 10A6q26CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1956EGFRERBB | ERBB1 | HER1 | NISBD2 | PIG61 | mENAepidermal growth factor receptor7p12Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
6424SFRP4FRP-4 | FRPHE | sFRP-4secreted frizzled-related protein 47p14.1CV:PGCnp
DMG:Wockner_2014
9805SCRN1SES1secernin 17p14.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
816CAMK2BCAM2 | CAMK2 | CAMKBcalcium/calmodulin-dependent protein kinase II beta7p14.3-p14.1CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1687DFNA5ICERE-1deafness, autosomal dominant 57p15CV:PGC128
CV:PGCnp
196AHRbHLHe76aryl hydrocarbon receptor7p15CV:PGCnp
PMID:cooccur
3205HOXA9ABD-B | HOX1 | HOX1.7 | HOX1Ghomeobox A97p15.2DMG:Wockner_2014
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
3209HOXA13HOX1 | HOX1Jhomeobox A137p15.2CV:PGCnp
DMG:Wockner_2014
2128EVX1EVX-1even-skipped homeobox 17p15.2CV:PGCnp
3198HOXA1BSAS | HOX1 | HOX1Fhomeobox A17p15.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1124CHN2ARHGAP3 | BCH | CHN2-3 | RHOGAP3chimerin 27p15.3Association
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
222894FERD3LN-TWIST | NATO3 | NTWIST | bHLHa31Fer3-like bHLH transcription factor7p21.1CV:PGCnp
DMG:Wockner_2014
7291TWIST1ACS3 | BPES2 | BPES3 | CRS | CRS1 | CSO | SCS | TWIST | bHLHa38twist family bHLH transcription factor 17p21.2CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
26053AUTS2FBRSL2 | MRD26autism susceptibility candidate 27q11.22CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
DNM:McCarthy_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
9863MAGI2ACVRIP1 | AIP-1 | AIP1 | ARIP1 | MAGI-2 | SSCAMmembrane associated guanylate kinase, WW and PDZ domain containing 27q21Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
6863TAC1Hs.2563 | NK2 | NKNA | NPK | TAC2tachykinin precursor 17q21-q22CV:PGCnp
GO_Annotation
PMID:cooccur
2913GRM3GLUR3 | GPRC1C | MGLUR3 | mGlu3glutamate receptor, metabotropic 37q21.1-q21.2Association
Core
CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
4885NPTX2NARP | NP-II | NP2neuronal pentraxin 27q21.3-q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Potential synaptic genes
1749DLX5SHFM1Ddistal-less homeobox 57q22CV:PGCnp
GO_Annotation
PMID:cooccur
5649RELNETL7 | LIS2 | PRO1598 | RLreelin7q22Association
Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
349152DPY19L2P2-DPY19L2 pseudogene 27q22.1CV:PGCnp
DMG:Jaffe_2016
7425VGFSCG7 | SgVIIVGF nerve growth factor inducible7q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
375612LHFPL3LHFPL4lipoma HMGIC fusion partner-like 37q22.2CV:PGCnp
4897NRCAM-neuronal cell adhesion molecule7q31CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
51384WNT16-wingless-type MMTV integration site family member 167q31CV:PGCnp
DMG:Jaffe_2016
1080CFTRABC35 | ABCC7 | CF | CFTR/MRP | MRP7 | TNR-CFTR | dJ760C5.1cystic fibrosis transmembrane conductance regulator7q31.2CV:PGCnp
Expression
Network
PMID:cooccur
7472WNT2INT1L1 | IRPwingless-type MMTV integration site family member 27q31.2CV:PGCnp
PMID:cooccur
8976WASLN-WASP | NWASP | WASPBWiskott-Aldrich syndrome-like7q31.3CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
9162DGKIDGK-IOTAdiacylglycerol kinase iota7q32.3-q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3110MNX1HB9 | HLXB9 | HOXHB9 | SCRA1motor neuron and pancreas homeobox 17q36DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
2020EN2-engrailed homeobox 27q36CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
6469SHHHHG1 | HLP3 | HPE3 | MCOPCB5 | SMMCI | TPT | TPTPSsonic hedgehog7q36CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
7434VIPR2C16DUPq36.3 | DUP7q36.3 | PACAP-R-3 | PACAP-R3 | VIP-R-2 | VPAC2 | VPAC2R | VPCAP2Rvasoactive intestinal peptide receptor 27q36.3CNV:YES
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1052CEBPDC/EBP-delta | CELF | CRP3 | NF-IL6-betaCCAAT/enhancer binding protein delta8p11.2-p11.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
155ADRB3BETA3ARadrenoceptor beta 38p11.23GO_Annotation
PMID:cooccur
GPCR SIGNALLING
3084NRG1ARIA | GGF | GGF2 | HGL | HRG | HRG1 | HRGA | MST131 | MSTP131 | NDF | NRG1-IT2 | SMDFneuregulin 18p12Association
Core
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
4741NEFMNEF3 | NF-M | NFMneurofilament, medium polypeptide8p21CV:GWAScat
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
4747NEFLCMT1F | CMT2E | NF-L | NF68 | NFL | PPP1R110neurofilament, light polypeptide8p21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
148ADRA1AADRA1C | ADRA1L1 | ALPHA1AARadrenoceptor alpha 1A8p21.2ADT:Sun_2012
Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
GPCR SIGNALLING
9788MTSS1MIM | MIMA | MIMBmetastasis suppressor 18p22CV:GWASdb
CV:PGCnp
GO_Annotation
427ASAH1AC | ACDase | ASAH | PHP | PHP32 | SMAPMEN-acylsphingosine amidohydrolase (acid ceramidase) 18p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
26281FGF20FGF-20 | RHDA2fibroblast growth factor 208p22CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4023LPLHDLCQ11 | LIPDlipoprotein lipase8p22CV:GWASdb
CV:PGCnp
CV:PheWAS
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1960EGR3EGR-3 | PILOTearly growth response 38p23-p21Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
83595SOX7-SRY-box 78p23.1CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
2626GATA4ASD2 | TACHD | TOF | VSD1GATA binding protein 48p23.1-p22CV:PGCnp
PMID:cooccur
64478CSMD1PPP1R24CUB and Sushi multiple domains 18p23.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
PMID:cooccur
3574IL7IL-7interleukin 78q12-q13CV:GWASdb
CV:PGCnp
5179PENKPE | PENK-Aproenkephalin8q12.1CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
7274TTPAATTP | AVED | TTP1 | alphaTTPtocopherol (alpha) transfer protein8q12.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
27319BHLHE22BHLHB5 | Beta3 | CAGL85 | TNRC20basic helix-loop-helix family member e228q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8989TRPA1ANKTM1 | FEPStransient receptor potential cation channel subfamily A member 18q13CV:GWASdb
CV:PGCnp
81796SLCO5A1OATP-J | OATP-RP4 | OATP5A1 | OATPJ | OATPRP4 | SLC21A15solute carrier organic anion transporter family member 5A18q13.3CV:GWASdb
CV:PGCnp
63978PRDM14PFM11PR domain 148q13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
23462HEY1BHLHb31 | CHF2 | HERP2 | HESR1 | HRT-1 | OAF1 | hHRT1hes related family bHLH transcription factor with YRPW motif 18q21CV:PGCnp
GO_Annotation
9242MSCABF-1 | ABF1 | MYOR | bHLHa22musculin8q21CV:PGCnp
PMID:cooccur
11075STMN2SCG10 | SCGN10stathmin 28q21.13CV:GWASdb
CV:PGCnp
GO_Annotation
51633OTUD6BCGI-77 | DUBA-5 | DUBA5OTU domain containing 6B8q21.3CV:PGCnp
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
392255GDF6BMP-13 | BMP13 | CDMP2 | KFM | KFS | KFS1 | KFSL | LCA17 | MCOP4 | MCOPCB6 | SCDO4 | SGM1growth differentiation factor 68q22.1CV:PGCnp
DMG:Jaffe_2016
340419RSPO2CRISTIN2R-spondin 28q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
114788CSMD3-CUB and Sushi multiple domains 38q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3786KCNQ3BFNC2 | EBN2 | KV7.3potassium voltage-gated channel subfamily Q member 38q24CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
114ADCY8AC8 | ADCY3 | HBAC1adenylate cyclase 8 (brain)8q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
5339PLECEBS1 | EBSMD | EBSND | EBSO | EBSOG | EBSPA | HD1 | LGMD2Q | PCN | PLEC1 | PLEC1b | PLTNplectin8q24CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
157378TMEM65-transmembrane protein 658q24.13CV:GWASdb
CV:PGCnp
1936EEF1DEF-1D | EF1D | FP1047eukaryotic translation elongation factor 1 delta8q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
84948TIGD5-tigger transposable element derived 58q24.3CV:PGCnp
DMG:Wockner_2014
22898DENND3-DENN domain containing 38q24.3CV:PGCnp
DMG:Wockner_2014
1271CNTFR-ciliary neurotrophic factor receptor9p13CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
441459ANKRD18BbA255A11.3 | bA255A11.5ankyrin repeat domain 18B9p13.3CV:PGCnp
152007GLIPR2C9orf19 | GAPR-1 | GAPR1GLI pathogenesis-related 29p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
1993ELAVL2HEL-N1 | HELN1 | HUBELAV like neuron-specific RNA binding protein 29p21CV:GWASdb
CV:PGCnp
PMID:cooccur
4300MLLT3AF9 | YEATS3myeloid/lymphoid or mixed-lineage leukemia; translocated to, 39p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
1761DMRT1CT154 | DMT1doublesex and mab-3 related transcription factor 19p24.3CV:PGCnp
PMID:cooccur
56033BARX1-BARX homeobox 19q12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
8395PIP5K1BMSS4 | STM7phosphatidylinositol-4-phosphate 5-kinase, type I, beta9q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
9630GNA14-G protein subunit alpha 149q21CV:PGCnp
DMG:Jaffe_2016
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
9615GDACYPIN | GUANASE | NEDASINguanine deaminase9q21.13CV:PGCnp
GO_Annotation
PMID:cooccur
CELL METABOLISM
G2Cdb.human_TAP-PSD-95-CORE
Potential synaptic genes
257019FRMD34.1O | EPB41L4O | EPB41LO | P410FERM domain containing 39q21.32CV:GWASdb
CV:PGCnp
8013NR4A3CHN | CSMF | MINOR | NOR1 | TECnuclear receptor subfamily 4 group A member 39q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4915NTRK2GP145-TrkB | TRKB | trk-Bneurotrophic tyrosine kinase, receptor, type 29q22.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2203FBP1FBPfructose-bisphosphatase 19q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
138649ANKRD19PANKRD19 | bA526D8.2ankyrin repeat domain 19, pseudogene9q22.31CV:GWASdb
CV:PGCnp
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
54566EPB41L4BCG1 | EHM2erythrocyte membrane protein band 4.1 like 4B9q31-q32CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
116443GRIN3AGluN3A | NMDAR-L | NR3Aglutamate ionotropic receptor NMDA type subunit 3A9q31.1CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
85301COL27A1STLScollagen type XXVII alpha 19q32CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
23245ASTN2bA67K19.1astrotactin 29q33.1CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
26468LHX6LHX6.1LIM homeobox 69q33.2DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
5069PAPPAASBABP2 | DIPLA1 | IGFBP-4ase | PAPA | PAPP-A | PAPPA1pregnancy-associated plasma protein A, pappalysin 19q33.2CV:GWASdb
CV:PGCnp
4010LMX1BLMX1.2 | NPS1LIM homeobox transcription factor 1 beta9q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
9355LHX2LH2 | hLhx2LIM homeobox 29q33.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
774CACNA1BBIII | CACNL1A5 | CACNN | Cav2.2 | DYT23calcium voltage-gated channel subunit alpha1 B9q34CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
84628NTNG2LHLL9381 | Lmnt2 | NTNG1 | bA479K20.1netrin G29q34Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
56751BARHL1-BarH like homeobox 19q34CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
389792IER5LbA247A12.2immediate early response 5-like9q34.11CV:PGCnp
59335PRDM12HSAN8 | PFM9PR domain 129q34.12CV:PGCnp
DMG:Wockner_2014
2824GPM6BM6Bglycoprotein M6BXp22.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Potential synaptic genes
9758FRMPD4PDZD10 | PDZK10FERM and PDZ domain containing 4Xp22.2CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6473SHOXGCFX | PHOG | SHOXY | SSshort stature homeoboxXp22.33;Yp11.3PMID:cooccur
7105TSPAN6T245 | TM4SF6 | TSPAN-6tetraspanin 6Xq22CV:PGCnp
90843TCEAL8WEX3transcription elongation factor A like 8Xq22.1CV:GWASdb
CV:PGCnp
3358HTR2C5-HT1C | 5-HT2C | 5-HTR2C | 5HTR2C | HTR1C5-hydroxytryptamine receptor 2CXq24ADT:Sun_2012
Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
6658SOX3GHDX | MRGH | PHP | PHPX | SOXBSRY-box 3Xq27.1CV:GWASdb
CV:PGCnp
GO_Annotation
2334AFF2FMR2 | FMR2P | FRAXE | MRX2 | OX19AF4/FMR2 family member 2Xq28CV:GWASdb
CV:PGCnp
GO_Annotation
Potential synaptic genes
9248GPR50H9 | Mel1cG protein-coupled receptor 50Xq28CV:GWASdb
CV:PGCnp
PMID:cooccur
Potential synaptic genes