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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Gene Page: BACH2

Summary

GeneID

60468

Symbol

BACH2

Synonyms

Description

BTB and CNC homology 1, basic leucine zipper transcription factor 2

Locus tag

Gene type

protein-coding

Map location

6q15

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003700

transcription factor activity

IEA

GO:0005515

protein binding

IEA

GO:0043565

sequence-specific DNA binding

IEA

GO:0046983

protein dimerization activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
MAFK	FLJ32205 \| MGC71717 \| NFE2U \| P18	v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)	-	HPRD	8887638
PATZ1	MAZR \| PATZ \| RIAZ \| ZBTB19 \| ZNF278 \| ZSG \| dJ400N23	POZ (BTB) and AT hook containing zinc finger 1	Two-hybrid	BioGRID	10669750

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
HOLLMANN_APOPTOSIS_VIA_CD40_DN	267	178	All SZGR genes in this pathway
SENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_DN	175	82	All SZGR genes in this pathway
TURASHVILI_BREAST_DUCTAL_CARCINOMA_VS_LOBULAR_NORMAL_DN	69	43	All SZGR genes in this pathway
HUTTMANN_B_CLL_POOR_SURVIVAL_DN	60	39	All SZGR genes in this pathway
OSMAN_BLADDER_CANCER_DN	406	230	All SZGR genes in this pathway
BILBAN_B_CLL_LPL_UP	63	39	All SZGR genes in this pathway
HUMMEL_BURKITTS_LYMPHOMA_UP	43	27	All SZGR genes in this pathway
HAHTOLA_SEZARY_SYNDROM_DN	42	26	All SZGR genes in this pathway
MOTAMED_RESPONSE_TO_ANDROGEN_DN	6	5	All SZGR genes in this pathway
NUYTTEN_EZH2_TARGETS_UP	1037	673	All SZGR genes in this pathway
PASQUALUCCI_LYMPHOMA_BY_GC_STAGE_DN	165	104	All SZGR genes in this pathway
BENPORATH_EED_TARGETS	1062	725	All SZGR genes in this pathway
MORI_PLASMA_CELL_DN	33	20	All SZGR genes in this pathway
HADDAD_B_LYMPHOCYTE_PROGENITOR	293	193	All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_UP	1691	1088	All SZGR genes in this pathway
GAVIN_FOXP3_TARGETS_CLUSTER_T7	98	63	All SZGR genes in this pathway
GAVIN_FOXP3_TARGETS_CLUSTER_P4	100	62	All SZGR genes in this pathway
ZHENG_FOXP3_TARGETS_IN_T_LYMPHOCYTE_DN	37	29	All SZGR genes in this pathway
MARTINEZ_RB1_TARGETS_UP	673	430	All SZGR genes in this pathway
MARTINEZ_TP53_TARGETS_DN	593	372	All SZGR genes in this pathway
MARTINEZ_RB1_AND_TP53_TARGETS_DN	591	366	All SZGR genes in this pathway
BOYLAN_MULTIPLE_MYELOMA_C_D_UP	139	95	All SZGR genes in this pathway
CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_UP	85	50	All SZGR genes in this pathway
GUTIERREZ_WALDENSTROEMS_MACROGLOBULINEMIA_1_UP	9	5	All SZGR genes in this pathway
PASINI_SUZ12_TARGETS_DN	315	215	All SZGR genes in this pathway
DURAND_STROMA_S_UP	297	194	All SZGR genes in this pathway
ZWANG_TRANSIENTLY_UP_BY_2ND_EGF_PULSE_ONLY	1725	838	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-1/206	553	559	m8	hsa-miR-1	UGGAAUGUAAAGAAGUAUGUA
				hsa-miR-206^SZ	UGGAAUGUAAGGAAGUGUGUGG
				hsa-miR-613	AGGAAUGUUCCUUCUUUGCC
miR-10	5364	5370	m8	hsa-miR-10a	UACCCUGUAGAUCCGAAUUUGUG
miR-10	5364	5370	m8	hsa-miR-10b	UACCCUGUAGAACCGAAUUUGU
miR-103/107	4725	4731	m8	hsa-miR-103^brain	AGCAGCAUUGUACAGGGCUAUGA
				hsa-miR-107^brain	AGCAGCAUUGUACAGGGCUAUCA
				hsa-miR-103^brain	AGCAGCAUUGUACAGGGCUAUGA
				hsa-miR-107^brain	AGCAGCAUUGUACAGGGCUAUCA
miR-122	4655	4662	1A,m8	hsa-miR-122a	UGGAGUGUGACAAUGGUGUUUGU
miR-124.1	5333	5339	m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	5333	5339	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
				hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
				hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
				hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-129-5p	5775	5782	1A,m8	hsa-miR-129^brain	CUUUUUGCGGUCUGGGCUUGC
miR-129-5p	5775	5782	1A,m8	hsa-miR-129-5p	CUUUUUGCGGUCUGGGCUUGCU
miR-130/301	3709	3715	1A	hsa-miR-130a^brain	CAGUGCAAUGUUAAAAGGGCAU
				hsa-miR-301	CAGUGCAAUAGUAUUGUCAAAGC
				hsa-miR-130b^brain	CAGUGCAAUGAUGAAAGGGCAU
				hsa-miR-454-3p	UAGUGCAAUAUUGCUUAUAGGGUUU
				hsa-miR-130a^brain	CAGUGCAAUGUUAAAAGGGCAU
				hsa-miR-301	CAGUGCAAUAGUAUUGUCAAAGC
				hsa-miR-130b^brain	CAGUGCAAUGAUGAAAGGGCAU
				hsa-miR-454-3p	UAGUGCAAUAUUGCUUAUAGGGUUU
miR-137	131	137	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-137	131	137	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-142-3p	112	119	1A,m8	hsa-miR-142-3p	UGUAGUGUUUCCUACUUUAUGGA
miR-144	135	141	m8	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-145	516	523	1A,m8	hsa-miR-145	GUCCAGUUUUCCCAGGAAUCCCUU
miR-148/152	857	864	1A,m8	hsa-miR-148a	UCAGUGCACUACAGAACUUUGU
				hsa-miR-152^brain	UCAGUGCAUGACAGAACUUGGG
				hsa-miR-148b	UCAGUGCAUCACAGAACUUUGU
miR-15/16/195/424/497	3695	3701	m8	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-151	5823	5829	1A	hsa-miR-151^brain	ACUAGACUGAAGCUCCUUGAGG
miR-153	5381	5387	1A	hsa-miR-153	UUGCAUAGUCACAAAAGUGA
miR-153	5381	5387	1A	hsa-miR-153	UUGCAUAGUCACAAAAGUGA
miR-181	358	364	m8	hsa-miR-181a^brain	AACAUUCAACGCUGUCGGUGAGU
				hsa-miR-181b^SZ	AACAUUCAUUGCUGUCGGUGGG
				hsa-miR-181c^brain	AACAUUCAACCUGUCGGUGAGU
				hsa-miR-181d^brain	AACAUUCAUUGUUGUCGGUGGGUU
miR-182	1012	1019	1A,m8	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA
miR-183	1971	1977	m8	hsa-miR-183	UAUGGCACUGGUAGAAUUCACUG
miR-186	930	936	m8	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-190	5445	5451	m8	hsa-miR-190	UGAUAUGUUUGAUAUAUUAGGU
miR-29	193	200	1A,m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-30-5p	1783	1789	1A	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-31	1010	1017	1A,m8	hsa-miR-31	AGGCAAGAUGCUGGCAUAGCUG
miR-324-5p	5123	5129	m8	hsa-miR-324-5p	CGCAUCCCCUAGGGCAUUGGUGU
miR-339	268	274	1A	hsa-miR-339	UCCCUGUCCUCCAGGAGCUCA
miR-363	5773	5779	1A	hsa-miR-363	AUUGCACGGUAUCCAUCUGUAA
miR-378	344	350	1A	hsa-miR-378	CUCCUGACUCCAGGUCCUGUGU
miR-384	998	1004	1A	hsa-miR-384	AUUCCUAGAAAUUGUUCAUA
miR-409-3p	552	558	m8	hsa-miR-409-3p	CGAAUGUUGCUCGGUGAACCCCU
miR-448	5381	5387	1A	hsa-miR-448	UUGCAUAUGUAGGAUGUCCCAU
miR-448	5381	5387	1A	hsa-miR-448	UUGCAUAUGUAGGAUGUCCCAU
miR-450	5775	5781	1A	hsa-miR-450	UUUUUGCGAUGUGUUCCUAAUA
miR-490	5499	5505	1A	hsa-miR-490	CAACCUGGAGGACUCCAUGCUG
miR-496	2000	2007	1A,m8	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-504	5365	5371	m8	hsa-miR-504	AGACCCUGGUCUGCACUCUAU
miR-539	313	319	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU
miR-542-3p	328	334	1A	hsa-miR-542-3p	UGUGACAGAUUGAUAACUGAAA
miR-543	359	365	m8	hsa-miR-543	AAACAUUCGCGGUGCACUUCU
miR-96	1013	1019	1A	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC
miR-96	1013	1019	1A	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.