Search results: The pahtway p3060 has 1691 genes in the original annotation. Currently, there are 1088 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
56288PARD3ASIP | Baz | PAR3 | PAR3alpha | PARD-3 | PARD3A | PPP1R118 | SE2-5L16 | SE2-5LT1 | SE2-5T2par-3 family cell polarity regulator10p11.21CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
Ascano FMRP targets
3799KIF5BHEL-S-61 | KINH | KNS | KNS1 | UKHCkinesin family member 5B10p11.22CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5305PIP4K2API5P4KA | PIP5K2A | PIP5KII-alpha | PIP5KIIA | PIPKphosphatidylinositol-5-phosphate 4-kinase, type II, alpha10p12.2Association
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
64421DCLRE1CA-SCID | DCLREC1C | RS-SCID | SCIDA | SNM1CDNA cross-link repair 1C10p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
79723SUV39H2KMT1Bsuppressor of variegation 3-9 homolog 210p13DMG:Jaffe_2016Chromatin Remodeling Genes
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
5209PFKFB3IPFK2 | PFK2 | iPFK-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 310p15.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
105ADARB2ADAR3 | RED2adenosine deaminase, RNA specific B2 (inactive)10p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
9469CHST3C6ST | C6ST1 | HSDcarbohydrate (chondroitin 6) sulfotransferase 310q22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
23522KAT6BGTPTS | MORF | MOZ2 | MYST4 | ZC2HC6B | qkf | querkopflysine acetyltransferase 6B10q22.2CV:PGCnp
DMG:Jaffe_2016
Expression
9632SEC24C-SEC24 homolog C, COPII coat complex component10q22.2PMID:cooccurAscano FMRP targets
657BMPR1A10q23del | ACVRLK3 | ALK3 | CD292 | SKR5bone morphogenetic protein receptor type 1A10q22.3CV:PGCnp
57178ZMIZ1MIZ | RAI17 | TRAFIP10 | ZIMP10 | hZIMP10zinc finger MIZ-type containing 110q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
10580SORBS1CAP | FLAF2 | R85FL | SH3D5 | SH3P12 | SORB1sorbin and SH3 domain containing 110q23.33CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
1559CYP2C9CPC9 | CYP2C | CYP2C10 | CYPIIC9 | P450IIC9cytochrome P450 family 2 subfamily C member 910q24CV:GWASdb
CV:PGCnp
PMID:cooccur
27250PDCD4H731programmed cell death 4 (neoplastic transformation inhibitor)10q24DMG:Jaffe_2016
6468FBXW4DAC | FBW4 | FBWD4 | SHFM3 | SHSF3F-box and WD repeat domain containing 410q24CV:PGCnp
DMG:Jaffe_2016
4601MXI1MAD2 | MXD2 | MXI | bHLHc11MAX interactor 1, dimerization protein10q24-q25CV:GWASdb
CV:PGCnp
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
10023FRAT1-frequently rearranged in advanced T-cell lymphomas 110q24.1CV:PGCnp
57715SEMA4G-semaphorin 4G10q24.31CV:PGCnp
GO_Annotation
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
8945BTRCBETA-TRCP | FBW1A | FBXW1 | FBXW1A | FWD1 | bTrCP | bTrCP1 | betaTrCPbeta-transducin repeat containing E3 ubiquitin protein ligase10q24.32CV:PGCnp
9748SLKLOSK | STK2 | bA16H23.1 | se20-9STE20 like kinase10q24.33CV:PGCnp
DMG:Jaffe_2016
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
10935PRDX3AOP-1 | AOP1 | HBC189 | MER5 | PRO1748 | SP-22 | prx-IIIperoxiredoxin 310q25-q26CV:PGCnp
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6934TCF7L2TCF-4 | TCF4transcription factor 7 like 210q25.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
2869GRK5GPRK5G protein-coupled receptor kinase 510q26.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
392ARHGAP1CDC42GAP | RHOGAP | RHOGAP1 | p50rhoGAPRho GTPase activating protein 111p11.2CV:PGCnpINTRACELLULAR TRAFFICKING
51317PHF21ABHC80 | BM-006PHD finger protein 21A11p11.2CV:PGCnp
PMID:cooccur
55343SLC35C1CDG2C | FUCT1solute carrier family 35 member C111p11.2CV:PGCnp
DMG:Jaffe_2016
23279NUP160-nucleoporin 160kDa11p11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
4038LRP4CLSS | CMS17 | LRP-4 | LRP10 | MEGF7 | SOST2LDL receptor related protein 411p11.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
Ascano FMRP targets
84364ARFGAP2IRZ | NBLA10535 | ZFP289 | ZNF289ADP ribosylation factor GTPase activating protein 211p11.2-p11.12CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
54765TRIM44DIPB | HSA249128 | MC7tripartite motif containing 4411p13CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
5080PAX6AN | AN2 | D11S812E | FVH1 | MGDA | WAGRpaired box 611p13Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
10083USH1CAIE-75 | DFNB18 | DFNB18A | NY-CO-37 | NY-CO-38 | PDZ-45 | PDZ-73 | PDZ-73/NY-CO-38 | PDZ73 | PDZD7C | ush1cpstUSH1 protein network component harmonin11p14.3CV:PGCnp
6764ST5DENND2B | HTS1 | p126suppression of tumorigenicity 511p15CV:PGCnp
DMG:Wockner_2014
272AMPD3-adenosine monophosphate deaminase 311p15CV:GWASdb
DMG:Wockner_2014
89797NAV2HELAD1 | POMFIL2 | RAINB1 | STEERIN2 | UNC53H2neuron navigator 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
10553HTATIP2CC3 | SDR44U1 | TIP30HIV-1 Tat interactive protein 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2965GTF2H1BTF2 | P62 | TFB1 | TFIIHgeneral transcription factor IIH subunit 111p15.1-p14CV:PGCnp
Network
PMID:cooccur
27122DKK3REIC | RIGdickkopf WNT signaling pathway inhibitor 311p15.2CV:PGCnp
PMID:cooccur
7262PHLDA2BRW1C | BWR1C | HLDA2 | IPL | TSSC3pleckstrin homology like domain family A member 211p15.4CV:PGCnp
DMG:Wockner_2014
8495PPFIBP2Cclp1PPFIA binding protein 211p15.4CV:GWASdb
CV:PGCnp
PROTEIN CLUSTERING
81490PTDSS2PSS2phosphatidylserine synthase 211p15.5CV:PGCnp
DMG:Jaffe_2016
10077TSPAN32ART1 | PHEMX | PHMX | TSSC6tetraspanin 3211p15.5CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
6181RPLP2D11S2243E | LP2 | P2 | RPP2ribosomal protein lateral stalk subunit P211p15.5DMG:Wockner_2014
4928NUP98ADIR2 | NUP196 | NUP96nucleoporin 98kDa11p15.5CV:PGCnp
DNM:McCarthy_2014
CompositeSet
Darnell FMRP targets
6786STIM1D11S4896E | GOK | IMD10 | STRMK | TAM | TAM1stromal interaction molecule 111p15.5CV:GWASdb
CV:PGCnp
Ascano FMRP targets
4676NAP1L4NAP1L4b | NAP2 | NAP2L | hNAP2nucleosome assembly protein 1 like 411p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Ascano FMRP targets
3665IRF7IMD39 | IRF-7H | IRF7A | IRF7B | IRF7C | IRF7Hinterferon regulatory factor 711p15.5CV:PGCnp
PMID:cooccur
10581IFITM21-8D | DSPA2cinterferon induced transmembrane protein 211p15.5Expression
PMID:cooccur
28992MACROD1LRP16MACRO domain containing 111q11CV:PGCnp
187APLNRAGTRL1 | APJ | APJR | HG11apelin receptor11q12CV:PGCnp
710SERPING1C1IN | C1INH | C1NH | HAE1 | HAE2serpin peptidase inhibitor, clade G (C1 inhibitor), member 111q12.1CV:PGCnp
Expression
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
6811STX5SED5 | STX5Asyntaxin 511q12.3CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
INTRACELLULAR TRAFFICKING
83759RBM4BRBM30 | RBM4L | ZCCHC15 | ZCCHC21B | ZCRB3BRNA binding motif protein 4B11q13CV:PGCnp
10938EHD1H-PAST | HPAST1 | PAST | PAST1EH domain containing 111q13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
3177SLC29A2DER12 | ENT2 | HNP36solute carrier family 29 member 211q13CV:PGCnp
57124CD248CD164L1 | TEM1CD248 molecule11q13CV:PGCnp
DMG:Wockner_2014
55291PPP6R3C11orf23 | PP6R3 | SAP190 | SAPL | SAPLa | SAPS3protein phosphatase 6 regulatory subunit 311q13CV:GWASdb
CV:PGCnp
4926NUMA1NMP-22 | NUMAnuclear mitotic apparatus protein 111q13CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
Ascano FMRP targets
7423VEGFBVEGFL | VRFvascular endothelial growth factor B11q13CV:PGCnp
DMG:Wockner_2014
7439BEST1ARB | BEST | BMD | RP50 | TU15B | VMD2bestrophin 111q13CV:PGCnp
DEG:Zhao_2015
3338DNAJC4DANJC4 | HSPF2 | MCG18DnaJ heat shock protein family (Hsp40) member C411q13CV:PGCnp
26472PPP1R14BPHI-1 | PLCB3N | PNG | SOM172protein phosphatase 1 regulatory inhibitor subunit 14B11q13CV:PGCnp
9379NRXN2-neurexin 211q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Darnell FMRP targets
2495FTH1FHC | FTH | FTHL6 | HFE5 | PIG15 | PLIFferritin, heavy polypeptide 111q13CV:PGCnp
PMID:cooccur
CompositeSet
4296MAP3K11MEKK11 | MLK-3 | MLK3 | PTK1 | SPRKmitogen-activated protein kinase kinase kinase 1111q13.1-q13.3CV:PGCnp
DMG:Nishioka_2013
22992KDM2ACXXC8 | FBL11 | FBL7 | FBXL11 | JHDM1A | LILINAlysine demethylase 2A11q13.2CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
8500PPFIA1LIP.1 | LIP1 | LIPRINPTPRF interacting protein alpha 111q13.3CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
116985ARAP1CENTD2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 111q13.4CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
5091PCPCBpyruvate carboxylase11q13.4-q13.5CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
9846GAB2-GRB2 associated binding protein 211q14.1CV:PGCnp
DMG:Wockner_2014
837CASP4ICE(rel)II | ICEREL-II | ICH-2 | Mih1/TX | TXcaspase 411q22.2-q22.3CV:PGCnp
DNM:Girard_2011
GSMA_I
Network
PMID:cooccur
CompositeSet
8065CUL5VACM-1 | VACM1cullin 511q22.3CV:GWASdb
CV:PGCnp
GSMA_I
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
23086EXPH5SLAC2-B | SLAC2Bexophilin 511q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
54733SLC35F2HSNOV1solute carrier family 35 member F211q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
4321MMP12HME | ME | MME | MMP-12matrix metallopeptidase 1211q22.3CV:GWASdb
CV:PGCnp
3587IL10RACD210 | CD210a | CDW210A | HIL-10R | IL-10R1 | IL10Rinterleukin 10 receptor subunit alpha11q23Association
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
PMID:cooccur
5920RARRES3HRASLS4 | HRSL4 | PLA1/2-3 | RIG1 | TIG3retinoic acid receptor responder (tazarotene induced) 311q23CV:PGCnp
DMG:Wockner_2014
55823VPS11END1 | HLD12 | PEP5 | RNF108 | hVPS11VPS11, CORVET/HOPS core subunit11q23CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
1813DRD2D2DR | D2Rdopamine receptor D211q23ADT:Sun_2012
Association
Core
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
GPCR SIGNALLING
Potential synaptic genes
4837NNMT-nicotinamide N-methyltransferase11q23.1CV:PGCnp
GSMA_I
PMID:cooccur
7704ZBTB16PLZF | ZNF145zinc finger and BTB domain containing 1611q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
3606IL18IGIF | IL-18 | IL-1g | IL1F4interleukin 1811q23.1Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
4684NCAM1CD56 | MSK39 | NCAMneural cell adhesion molecule 111q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6876TAGLNSM22 | SMCC | TAGLN1 | WS3-10transgelin11q23.2GSMA_I
3145HMBSPBG-D | PBGD | PORC | UPShydroxymethylbilane synthase11q23.3Association
CV:PGCnp
GSMA_I
1656DDX6HLR2 | P54 | RCKDEAD-box helicase 611q23.3CV:PGCnp
CV:PheWAS
GSMA_I
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
7753ZNF202ZKSCAN10 | ZSCAN42zinc finger protein 20211q24CV:GWAScat
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
63970TP53AIP1P53AIP1tumor protein p53 regulated apoptosis inducing protein 111q24CV:PGCnp
DMG:Wockner_2014
56ACRV1D11S4365 | SP-10 | SPACA2acrosomal vesicle protein 111q24.2CV:PGCnp
6484ST3GAL4CGS23 | NANTA3 | SAT3 | SIAT4 | SIAT4C | ST3GalIV | STZST3 beta-galactoside alpha-2,3-sialyltransferase 411q24.2CV:PGCnp
9638FEZ1UNC-76fasciculation and elongation protein zeta 111q24.2Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
58516FAM60AC12orf14 | L4 | TERAfamily with sequence similarity 60 member A12p11CV:PGCnp
DMG:Montano_2016
5927KDM5ARBBP-2 | RBBP2 | RBP2lysine demethylase 5A12p11CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
8082SSPNDAGA5 | KRAG | NSPN | SPN1 | SPN2sarcospan12p11.2CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
23012STK38LNDR2serine/threonine kinase 38 like12p11.23CV:PGCnp
DNM:Fromer_2014
CompositeSet
5139PDE3ACGI-PDE | CGI-PDE A | CGI-PDE-A | HTNBphosphodiesterase 3A12p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
54477PLEKHA5PEPP-2 | PEPP2pleckstrin homology domain containing A512p12CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
6489ST8SIA1GD3S | SIAT8 | SIAT8-A | SIAT8A | ST8SiaIST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 112p12.1-p11.2CV:PGCnp
Expression
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
55766H2AFJH2AJH2A histone family member J12p12.3CV:PGCnp
Expression
27239GPR162A-2 | GRCAG protein-coupled receptor 16212p13DMG:Nishioka_2013CompositeSet
Darnell FMRP targets
715C1R-complement C1r subcomponent12p13CV:PGCnp
GO_Annotation
7167TPI1HEL-S-49 | TIM | TPI | TPIDtriosephosphate isomerase 112p13Expression
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9976CLEC2BAICL | CLECSF2 | HP10085 | IFNRG1C-type lectin domain family 2 member B12p13-p12CV:PGCnp
DMG:Nishioka_2013
5858PZPCPAMD6pregnancy-zone protein12p13-p12.2CV:PGCnp
PMID:cooccur
339APOBEC1APOBEC-1 | BEDP | CDAR1 | HEPRapolipoprotein B mRNA editing enzyme catalytic subunit 112p13.1CV:PGCnp
4040LRP6ADCAD2 | STHAG7LDL receptor related protein 612p13.2CV:PGCnp
PMID:cooccur
9332CD163M130 | MM130CD163 molecule12p13.3CV:PGCnp
DNM:Fromer_2014
Network
PMID:cooccur
CompositeSet
65125WNK1HSAN2 | HSN2 | KDP | PPP1R167 | PRKWNK1 | PSK | p65WNK lysine deficient protein kinase 112p13.3CV:PGCnp
DEG:Maycox_2009
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
55810FOXJ2FHXforkhead box J212p13.31CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
51147ING4my036 | p29ING4inhibitor of growth family member 412p13.31DMG:Wockner_2014
27345KCNMB4-potassium calcium-activated channel subfamily M regulatory beta subunit 412qCV:PGCnp
GO_Annotation
EXCITABILITY
9802DAZAP2PRTBDAZ associated protein 212q12CV:PGCnp
DMG:Wockner_2014
Network
6472SHMT2GLYA | HEL-S-51e | SHMTserine hydroxymethyltransferase 212q12-q14CV:GWAScat
CV:PGC128
CV:PGCnp
64375IKZF4EOS | ZNFN1A4IKAROS family zinc finger 412q13CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
363AQP6AQP2L | KIDaquaporin 612q13CV:PGCnp
DMG:Montano_2016
6778STAT6D12S1644 | IL-4-STAT | STAT6B | STAT6Csignal transducer and activator of transcription 612q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6602SMARCD1BAF60A | CRACD1 | Rsc6pSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 112q13-q14CV:PGCnp
Network
Chromatin Remodeling Genes
81539SLC38A1ATA1 | NAT2 | SAT1 | SNAT1solute carrier family 38 member 112q13.11CV:PGCnp
GO_Annotation
113251LARP4PP13296La ribonucleoprotein domain family member 412q13.12CV:PGCnp
55716LMBR1LLIMRlimb development membrane protein 1 like12q13.12DMG:Wockner_2014
25840METTL7AAAM-Bmethyltransferase like 7A12q13.12CV:PGCnp
DEG:Zhao_2015
Expression
1975EIF4BEIF-4B | PRO1843eukaryotic translation initiation factor 4B12q13.13CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
6601SMARCC2BAF170 | CRACC2 | Rsc8SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 212q13.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
3221HOXC4HOX3 | HOX3E | cp19homeobox C412q13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
5939RBMS2SCR3RNA binding motif, single stranded interacting protein 212q13.3CV:PGCnp
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
552AVPR1AAVPR V1a | AVPR1 | V1aRarginine vasopressin receptor 1A12q14.2CV:PGCnp
PMID:cooccur
1368CPM-carboxypeptidase M12q14.3CV:PGCnp
PMID:cooccur
4848CNOT2CDC36 | HSPC131 | NOT2 | NOT2HCCR4-NOT transcription complex subunit 212q15CV:PGCnp
DMG:Wockner_2014
56890MDM1-Mdm1 nuclear protein12q15CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
5074PAWRPAR4 | Par-4pro-apoptotic WT1 regulator12q21Association
CV:PGCnp
PMID:cooccur
8549LGR5FEX | GPR49 | GPR67 | GRP49 | HG38leucine-rich repeat containing G protein-coupled receptor 512q21.1CV:PGCnp
DMG:Wockner_2014
Expression
1466CSRP2CRP2 | LMO5 | SmLIMcysteine and glycine rich protein 212q21.1CV:PGCnp
DMG:Wockner_2014
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
29080CCDC59BR22 | HSPC128 | TAP26coiled-coil domain containing 5912q21.31CV:PGCnp
DMG:Jaffe_2016
1634DCNCSCD | DSPG2 | PG40 | PGII | PGS2 | SLRR1Bdecorin12q21.33CV:PGCnp
Network
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
429ASCL1ASH1 | HASH1 | MASH1 | bHLHa46achaete-scute family bHLH transcription factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
5053PAHPH | PKU | PKU1phenylalanine hydroxylase12q23.2CV:PGCnp
PMID:cooccur
10970CKAP4CLIMP-63 | ERGIC-63 | p63cytoskeleton-associated protein 412q23.3CV:PGCnp
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
1610DAODAAO | DAMOX | OXDAD-amino-acid oxidase12q24Association
Core
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
4598MVKLRBP | MK | MVLK | POROK3mevalonate kinase12q24CV:PGCnp
8315BRAPBRAP2 | IMP | RNF52BRCA1 associated protein12q24CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
9612NCOR2CTG26 | N-CoR2 | SMAP270 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC | TRAC-1 | TRAC1nuclear receptor corepressor 212q24CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
CompositeSet
Darnell FMRP targets
5992RFX4NYD-SP10regulatory factor X412q24CV:PGCnp
PMID:cooccur
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
5501PPP1CCPP-1G | PP1C | PPP1Gprotein phosphatase 1 catalytic subunit gamma12q24.1-q24.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
89910UBE3BBPIDS | KOSubiquitin protein ligase E3B12q24.11CV:PGCnpCompositeSet
Darnell FMRP targets
8638OASLOASLd | TRIP-14 | TRIP14 | p59 OASL | p59-OASL | p59OASL2'-5'-oligoadenylate synthetase like12q24.2CV:PGCnp
5037PEBP1HCNP | HCNPpp | HEL-210 | HEL-S-34 | HEL-S-96 | PBP | PEBP | PEBP-1 | RKIPphosphatidylethanolamine binding protein 112q24.23CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
26353HSPB8CMT2L | DHMN2 | E2IG1 | H11 | HMN2 | HMN2A | HSP22heat shock protein family B (small) member 812q24.23CV:PGCnp
949SCARB1CD36L1 | CLA-1 | CLA1 | HDLQTL6 | SR-BI | SRB1scavenger receptor class B member 112q24.31CV:PGCnp
DMG:Wockner_2014
35ACADSACAD3 | SCADacyl-CoA dehydrogenase, C-2 to C-3 short chain12q24.31CV:PGCnp
8099CDK2AP1DOC1 | DORC1 | ST19 | doc-1 | p12DOC-1cyclin-dependent kinase 2 associated protein 112q24.31CV:PGCnp
LK:YES
PMID:cooccur
11066SNRNP35HM-1 | U1SNRNPBPsmall nuclear ribonucleoprotein U11/U12 subunit 3512q24.31CV:PGCnp
7637ZNF84HPF2zinc finger protein 8412q24.33DMG:Jaffe_2016
55743CHFRRNF116 | RNF196checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase12q24.33CV:PGCnp
11211FZD10CD350 | FZ-10 | Fz10 | FzE7 | hFz10frizzled class receptor 1012q24.33CV:GWASdb
CV:PGCnp
2802GOLGA3GCP170 | MEA-2golgin A312q24.33CV:PGCnp
5042PABPC3PABP3 | PABPL3 | tPABPpoly(A) binding protein, cytoplasmic 313q12-q13CV:PGCnp
DMG:Wockner_2014
54737MPHOSPH8HSMPP8 | TWA3 | mpp8M-phase phosphoprotein 813q12.11CV:PGCnp
DMG:Jaffe_2016
51082POLR1DAC19 | POLR1C | RPA16 | RPA9 | RPAC2 | RPC16 | RPO1-3 | TCS2polymerase (RNA) I subunit D13q12.2CV:PGCnp
DMG:vanEijk_2014
2308FOXO1FKH1 | FKHR | FOXO1Aforkhead box O113q14.1CV:PGCnp
DMG:Montano_2016
DNM:Guipponi_2014
Network
PMID:cooccur
10301DLEU1BCMS | BCMS1 | DLB1 | DLEU2 | LEU1 | LEU2 | LINC00021 | NCRNA00021 | XTP6deleted in lymphocytic leukemia 1 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
27253PCDH17PCDH68 | PCH68protocadherin 1713q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5101PCDH9-protocadherin 913q21.32CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
CompositeSet
Darnell FMRP targets
688KLF5BTEB2 | CKLF | IKLFKruppel-like factor 5 (intestinal)13q22.1Association
CV:PGCnp
PMID:cooccur
10464PIBF1C13orf24 | CEP90 | PIBFprogesterone immunomodulatory binding factor 113q22.1CV:PGCnp
8881CDC16ANAPC6 | APC6 | CDC16Hs | CUT9cell division cycle 1613q34CV:GWASdb
CV:PGCnp
8660IRS2IRS-2insulin receptor substrate 213q34CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
65110UPF3AHUPF3A | RENT3A | UPF3UPF3 regulator of nonsense transcripts homolog A (yeast)13q34CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7528YY1DELTA | INO80S | NF-E1 | UCRBP | YIN-YANG-1YY1 transcription factor14qCV:PGCnp
Network
PMID:cooccur
6038RNASE4RAB1 | RNS4ribonuclease A family member 414q11CV:GWASdb
CV:PGCnp
GSMA_I
6297SALL2COLB | HSAL2 | Sal-2 | ZNF795 | p150(Sal2)spalt-like transcription factor 214q11.1-q12CV:PGCnp
DEG:Sanders_2013
GSMA_I
CompositeSet
Darnell FMRP targets
26020LRP10LRP9 | MST087 | MSTP087LDL receptor related protein 1014q11.2CV:PGCnp
GSMA_I
PMID:cooccur
10278EFSCAS3 | CASS3 | EFS1 | EFS2 | HEFS | SINembryonal Fyn-associated substrate14q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9985REC8HR21spB | REC8L1 | Rec8pREC8 meiotic recombination protein14q12CV:PGCnp
GSMA_I
PMID:cooccur
4792NFKBIAIKBA | MAD-3 | NFKBINFKB inhibitor alpha14q13CV:GWASdb
CV:PGCnp
Network
60485SAV1SAV | WW45 | WWP4salvador family WW domain containing protein 114q13-q23CV:PGCnp
CV:PheWAS
64067NPAS3MOP6 | PASD6 | bHLHe12neuronal PAS domain protein 314q13.1Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
11177BAZ1AACF1 | WALp1 | WCRF180 | hACF1bromodomain adjacent to zinc finger domain 1A14q13.2CV:GWASdb
CV:PGCnp
6617SNAPC1PTFgamma | SNAP43small nuclear RNA activating complex polypeptide 114q22CV:PGCnp
DMG:Jaffe_2016
3895KTN1CG1 | KNT | MU-RMS-40.19kinectin 114q22.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
2764GMFBGMFglia maturation factor beta14q22.2CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
4149MAXbHLHd4MYC associated factor X14q23CV:PGCnp
PMID:cooccur
5926ARID4ARBBP-1 | RBBP1 | RBP-1 | RBP1AT-rich interaction domain 4A14q23.1CV:PGCnp
23002DAAM1-dishevelled associated activator of morphogenesis 114q23.1Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
677ZFP36L1BRF1 | Berg36 | ERF-1 | ERF1 | RNF162B | TIS11B | cMG1ZFP36 ring finger protein-like 114q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
8110DPF3BAF45C | CERD4double PHD fingers 314q24.2CV:PGCnp
5826ABCD4ABC41 | EST352188 | MAHCJ | P70R | P79R | PMP69 | PXMP1LATP binding cassette subfamily D member 414q24.3CV:PGCnp
DMG:Wockner_2014
9517SPTLC2HSN1C | LCB2 | LCB2A | NSAN1C | SPT2 | hLCB2aserine palmitoyltransferase long chain base subunit 214q24.3CV:PGCnp
Expression
PMID:cooccur
Ascano FMRP targets
8650NUMBC14orf41 | S171 | c14_5527numb homolog (Drosophila)14q24.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Potential synaptic genes
57862ZNF410APA-1 | APA1zinc finger protein 41014q24.3DMG:Jaffe_2016
DNM:Fromer_2014
3705ITPK1ITRPK1inositol-tetrakisphosphate 1-kinase14q31CV:PGCnp
DMG:Wockner_2014
1112FOXN3C14orf116 | CHES1 | PRO1635forkhead box N314q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
54207KCNK10K2p10.1 | PPP1R97 | TREK-2 | TREK2potassium two pore domain channel subfamily K member 1014q31.3CV:GWASdb
CV:PGCnp
PMID:cooccur
12SERPINA3AACT | ACT | GIG24 | GIG25serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 314q32.1CV:PGCnp
Expression
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
79890RIN3-Ras and Rab interactor 314q32.12CV:PGCnp
DMG:Wockner_2014
23405DICER1DCR1 | Dicer | Dicer1e | HERNA | K12H4.8-LIKE | MNG1 | RMSE2dicer 1 ribonuclease III14q32.13CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
9112MTA1-metastasis associated 114q32.3CV:PGCnp
Network
4140MARK3CTAK1 | KP78 | PAR1A | Par-1amicrotubule affinity regulating kinase 314q32.32CV:PGCnp
DMG:vanEijk_2014
Potential synaptic genes
1983EIF5EIF-5 | EIF-5Aeukaryotic translation initiation factor 514q32.32CV:PGCnp
DNM:Girard_2011
Expression
CompositeSet
3320HSP90AA1EL52 | HEL-S-65p | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP-2 | LAP2heat shock protein 90kDa alpha family class A member 114q32.33CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
3653IPWNCRNA00002imprinted in Prader-Willi syndrome (non-protein coding)15q11.2CV:PGCnp
PMID:cooccur
57099AVENPDCD12apoptosis and caspase activation inhibitor15q13.1CV:PGCnp
DNM:McCarthy_2014
825CAPN3CANP3 | CANPL3 | LGMD2 | LGMD2A | nCL-1 | p94calpain 315q15.1CV:PGCnp
6652SORDHEL-S-95n | SORD1sorbitol dehydrogenase15q15.3CV:PGCnp
DMG:Wockner_2014
4236MFAP1-microfibrillar associated protein 115q15.3CV:PGCnpAscano FMRP targets
55930MYO5C-myosin VC15q21CV:PGCnp
DMG:Wockner_2014
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
2200FBN1ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2fibrillin 115q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
8854ALDH1A2RALDH(II) | RALDH2 | RALDH2-Taldehyde dehydrogenase 1 family member A215q21.3CV:PGCnp
GO_Annotation
PMID:cooccur
5371PMLMYL | PP8675 | RNF71 | TRIM19promyelocytic leukemia15q22CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
CompositeSet
4828NMB-neuromedin B15q22-qterCV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
4643MYO1EFSGS6 | HuncM-IC | MYO1Cmyosin IE15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
302ANXA2ANX2 | ANX2L4 | CAL1H | HEL-S-270 | LIP2 | LPC2 | LPC2D | P36 | PAP-IVannexin A215q22.2CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
9325TRIP4ASC-1 | ASC1 | HsT17391 | ZC2HC5thyroid hormone receptor interactor 415q22.31CV:PGCnp
DMG:Nishioka_2013
23604DAPK2DRP-1 | DRP1death-associated protein kinase 215q22.31CV:PGCnp
Network
26035GLCEHSEPIglucuronic acid epimerase15q23CV:PGCnp
10066SCAMP2-secretory carrier membrane protein 215q23-q25CV:PGCnp
DMG:Wockner_2014
EXOCYTOSIS
6457SH3GL3CNSA3 | EEN-B2 | HsT19371 | SH3D2C | SH3P13SH3-domain GRB2-like 315q24CV:GWASdb
CV:PGCnp
CV:PheWAS
GO_Annotation
Network
1445CSK-c-src tyrosine kinase15q24.1CV:PGCnp
Network
PMID:cooccur
56905C15orf39-chromosome 15 open reading frame 3915q24.2CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Ascano FMRP targets
4916NTRK3GP145-TrkC | TRKC | gp145(trkC)neurotrophic tyrosine kinase, receptor, type 315q25CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
1512CTSHACC-4 | ACC-5 | ACC4 | ACC5 | CPSBcathepsin H15q25.1CV:PGCnp
10588MTHFSHsT192685,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)15q25.1CV:PGCnp
DMG:vanEijk_2014
23478SEC11A1810012E07Rik | SEC11L1 | SPC18 | SPCS4A | sid2895SEC11 homolog A, signal peptidase complex subunit15q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
11214AKAP13AKAP-13 | AKAP-Lbc | ARHGEF13 | BRX | HA-3 | Ht31 | LBC | PRKA13 | PROTO-LB | PROTO-LBC | c-lbc | p47A-kinase anchoring protein 1315q25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
28232SLCO3A1OATP-D | OATP3A1 | OATPD | SLC21A11solute carrier organic anion transporter family member 3A115q26CV:GWAScat
CV:PGCnp
PMID:cooccur
1106CHD2EEOCchromodomain helicase DNA binding protein 215q26CV:PGCnp
4122MAN2A2MANA2Xmannosidase alpha class 2A member 215q26.1CV:PGCnpCompositeSet
Darnell FMRP targets
3418IDH2D2HGA2 | ICD-M | IDH | IDHM | IDP | IDPM | mNADP-IDHisocitrate dehydrogenase 2 (NADP+), mitochondrial15q26.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
23336SYNMDMN | SYNsynemin15q26.3CV:PGCnp
DMG:Jaffe_2016
4150MAZPUR1 | Pur-1 | SAF-1 | SAF-2 | SAF-3 | ZF87 | ZNF801 | Zif87MYC associated zinc finger protein16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
CompositeSet
Darnell FMRP targets
7041TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 116p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
10423CDIPTPIS | PIS1CDP-diacylglycerol--inositol 3-phosphatidyltransferase16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
10847SRCAPDOMO1 | EAF1 | FLHS | SWR1Snf2-related CREBBP activator protein16p11.2CV:PGCnp
GSMA_IIE
Chromatin Remodeling Genes
9344TAOK2MAP3K17 | PSK | PSK1 | PSK1-BETA | TAO1 | TAO2TAO kinase 216p11.2CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6911TBX6SCDO5T-box 616p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
51704GPRC5BRAIG-2 | RAIG2G protein-coupled receptor class C group 5 member B16p12CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_IIE
CompositeSet
2975GTF3C1TFIIIC | TFIIIC220 | TFIIICalphageneral transcription factor IIIC subunit 116p12CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5930RBBP6MY038 | P2P-R | PACT | RBQ-1 | SNAMAretinoblastoma binding protein 616p12.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIE
10261IGSF6DORAimmunoglobulin superfamily member 616p12.2CV:PGCnp
GSMA_IIE
10229COQ7CAT5 | CLK-1 | CLK1 | COQ10D8coenzyme Q7 homolog, ubiquinone (yeast)16p12.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
54820NDE1HOM-TES-87 | LIS4 | MHAC | NDE | NUDE | NUDE1nudE neurodevelopment protein 116p13.11CNV:YES
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
58986TMEM8AM83 | TMEM6 | TMEM8transmembrane protein 8A16p13.3CV:PGCnp
1387CREBBPCBP | KAT3A | RSTSCREB binding protein16p13.3CV:PGCnp
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
90861HN1LC16orf34 | L11hematological and neurological expressed 1-like16p13.3CV:PGCnp
DMG:Wockner_2014
90864SPSB3C16orf31 | SSB3splA/ryanodine receptor domain and SOCS box containing 316p13.3CV:PGCnp
DMG:Wockner_2014
5310PKD1PBP | Pc-1 | TRPP1polycystin 1, transient receptor potential channel interacting16p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7874USP7HAUSP | TEF1ubiquitin specific peptidase 7 (herpes virus-associated)16p13.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
Ascano FMRP targets
113ADCY7AC7adenylate cyclase 716q12.1CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
4313MMP2CLG4 | CLG4A | MMP-2 | MMP-II | MONA | TBE-1matrix metallopeptidase 216q12.2CV:PGCnp
Network
PMID:cooccur
4496MT1HMT-0 | MT-1H | MT-IH | MT1metallothionein 1H16q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4501MT1XMT-1l | MT1metallothionein 1X16q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
1459CSNK2A2CK2A2 | CK2alpha' | CSNK2A1casein kinase 2 alpha 216q21CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
11060WWP2AIP2 | WWp2-likeWW domain containing E3 ubiquitin protein ligase 216q22.1CV:PGCnp
DMG:Wockner_2014
1728NQO1DHQU | DIA4 | DTD | NMOR1 | NMORI | QR1NAD(P)H dehydrogenase, quinone 116q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
1506CTRLCTRL1chymotrypsin-like16q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
6898TAT-tyrosine aminotransferase16q22.1CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
5681PSKH1-protein serine kinase H116q22.1CV:PGCnp
9057SLC7A6LAT-2 | LAT3 | y+LAT-2solute carrier family 7 member 616q22.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
CompositeSet
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
463ZFHX3ATBF1 | ATBT | ZNF927zinc finger homeobox 316q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
51741WWOXD16S432E | EIEE28 | FOR | FRA16D | HHCMA56 | PRO0128 | SCAR12 | SDR41C1 | WOX1WW domain containing oxidoreductase16q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
79152FA2HFAAH | FAH1 | FAXDC1 | SCS7 | SPG35fatty acid 2-hydroxylase16q23CV:GWASdb
CV:PGCnp
PMID:cooccur
3281HSBP1NPC-A-13heat shock factor binding protein 116q23.3CV:PGCnp
54971BANPBEND1 | SMAR1 | SMARBP1BTG3 associated nuclear protein16q24CV:PGCnp
DMG:Wockner_2014
Expression
8558CDK10PISSLREcyclin-dependent kinase 1016q24CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
9100USP10UBPOubiquitin specific peptidase 1016q24.1CV:PGCnp
DNM:Guipponi_2014
5336PLCG2APLAID | FCAS3 | PLC-IV | PLC-gamma-2phospholipase C gamma 216q24.1CV:GWASdb
CV:PGCnp
PMID:cooccur
5119CHMP1ACHMP1 | PCH8 | PCOLN3 | PRSM1 | VPS46-1 | VPS46Acharged multivesicular body protein 1A16q24.3CV:PGCnp
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
6137RPL13BBC1 | D16S444E | D16S44E | L13ribosomal protein L1316q24.3|17p11.2CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
6720SREBF1SREBP-1c | SREBP1 | SREBP1a | bHLHd1sterol regulatory element binding transcription factor 117p11.2CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
2314FLIIFLI | FLIL | Fli1flightless I actin binding protein17p11.2CV:PGCnpAscano FMRP targets
224ALDH3A2ALDH10 | FALDH | SLSaldehyde dehydrogenase 3 family member A217p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9706ULK2ATG1B | Unc51.2unc-51 like autophagy activating kinase 217p11.2CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
23326USP22USP3Lubiquitin specific peptidase 2217p11.2CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
26168SENP3SMT3IP1 | SSP3 | Ulp1SUMO1/sentrin/SMT3 specific peptidase 317p13CV:PGCnp
DMG:Wockner_2014
30851TAX1BP3TIP-1 | TIP1Tax1 binding protein 317p13DMG:vanEijk_2014
Expression
5187PER1PER | RIGUI | hPERperiod circadian clock 117p13.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
22899ARHGEF15ARGEF15 | E5 | Ephexin5 | Vsm-RhoGEFRho guanine nucleotide exchange factor 1517p13.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
7157TP53BCC7 | LFS1 | P53 | TRP53tumor protein p5317p13.1Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
5338PLD2-phospholipase D217p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9135RABEP1RAB5EP | RABPT5rabaptin, RAB GTPase binding effector protein 117p13.2CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
7442TRPV1VR1transient receptor potential cation channel subfamily V member 117p13.2CV:PGCnp
DEG:Zhao_2015
Network
PMID:cooccur
27043PELP1MNAR | P160proline, glutamate and leucine rich protein 117p13.2CV:PGCnp
DMG:Wockner_2014
51763INPP5KPPS | SKIPinositol polyphosphate-5-phosphatase K17p13.3CV:PGCnp
GO_Annotation
4641MYO1CMMI-beta | MMIb | NMI | myr2myosin IC17p13.3CV:PGCnpAscano FMRP targets
55178RNMTL1MRM3 | RMTL1RNA methyltransferase like 117p13.3CV:PGCnpAscano FMRP targets
9527GOSR1GOLIM2 | GOS-28 | GOS28 | GOS28/P28 | GS28 | P28golgi SNAP receptor complex member 117q11CV:PGCnp
GO_Annotation
10948STARD3CAB1 | MLN64 | es64StAR related lipid transfer domain containing 317q11-q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7067THRAAR7 | CHNG6 | EAR7 | ERB-T-1 | ERBA | ERBA1 | NR1A1 | THRA1 | THRA2 | c-ERBA-1thyroid hormone receptor, alpha17q11.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
5606MAP2K3MAPKK3 | MEK3 | MKK3 | PRKMK3 | SAPKK-2 | SAPKK2mitogen-activated protein kinase kinase 317q11.2CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
26284ERAL1CEGA | ERA | ERA-W | ERAL1A | H-ERA | HERA-A | HERA-BEra-like 12S mitochondrial rRNA chaperone 117q11.2CV:PGCnp
DMG:Jaffe_2016
5469MED1CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2mediator complex subunit 117q12CV:PGCnp
51755CDK12CRK7 | CRKR | CRKRScyclin-dependent kinase 1217q12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
1267CNPCNP12',3'-cyclic nucleotide 3' phosphodiesterase17q21Association
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
2670GFAPALXDRDglial fibrillary acidic protein17q21CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9570GOSR2Bos1 | EPM6 | GS27golgi SNAP receptor complex member 217q21CV:PGCnp
10493VAT1VATIvesicle amine transport 117q21CV:PGCnp
9020MAP3K14FTDCR1B | HS | HSNIK | NIKmitogen-activated protein kinase kinase kinase 1417q21CV:PGCnp
Network
9862MED24ARC100 | CRSP100 | CRSP4 | DRIP100 | MED5 | THRAP4 | TRAP100mediator complex subunit 2417q21.1CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
28511NKIRAS2KBRAS2 | kappaB-Ras2NFKB inhibitor interacting Ras-like 217q21.2DEG:Zhao_2015
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
147179WIPF2WICH | WIREWAS/WASL interacting protein family member 217q21.2CV:PGCnp
284119PTRFCAVIN | CAVIN1 | CGL4 | FKSG13 | cavin-1polymerase I and transcript release factor17q21.2CV:PGCnp
DMG:Wockner_2014
4779NFE2L1LCR-F1 | NRF1 | TCF11nuclear factor, erythroid 2 like 117q21.3CV:PGCnp
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
29916SNX11-sorting nexin 1117q21.32CV:PGCnp
1748DLX4BP1 | DLX7 | DLX8 | DLX9 | OFC15distal-less homeobox 417q21.33CV:PGCnp
DMG:Wockner_2014
9043SPAG9CT89 | HLC-6 | HLC4 | HLC6 | JIP-4 | JIP4 | JLP | PHET | PIG6sperm associated antigen 917q21.33CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
8165AKAP1AKAP | AKAP121 | AKAP149 | AKAP84 | D-AKAP1 | PPP1R43 | PRKA1 | SAKAP84 | TDRD17A-kinase anchoring protein 117q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7716VEZF1DB1 | ZNF161vascular endothelial zinc finger 117q22CV:PGCnp
DMG:Jaffe_2016
8913CACNA1GCa(V)T.1 | Cav3.1 | NBR13 | SCA42calcium voltage-gated channel subunit alpha1 G17q22CV:PGCnpCompositeSet
Darnell FMRP targets
Potential synaptic genes
8493PPM1DPP2C-DELTA | WIP1protein phosphatase, Mg2+/Mn2+ dependent 1D17q23.2DMG:Nishioka_2013
DMG:Wockner_2014
9902MRC2CD280 | CLEC13E | ENDO180 | UPARAPmannose receptor, C type 217q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
9969MED13ARC250 | DRIP250 | HSPC221 | THRAP1 | TRAP240mediator complex subunit 1317q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
CompositeSet
Darnell FMRP targets
11325DDX42DDX42P | RHELP | RNAHP | SF3B8 | SF3b125DEAD-box helicase 4217q23.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
4215MAP3K3MAPKKK3 | MEKK3mitogen-activated protein kinase kinase kinase 317q23.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
10238DCAF7AN11 | HAN11 | SWAN-1 | WDR68DDB1 and CUL4 associated factor 717q23.3CV:PGCnp
DMG:Wockner_2014
8787RGS9PERRS | RGS9Lregulator of G-protein signaling 917q24.1CV:PGCnp
PMID:cooccur
26207PITPNC1M-RDGB-beta | MRDGBbeta | RDGB-BETA | RDGBB | RDGBB1phosphatidylinositol transfer protein, cytoplasmic 117q24.2CV:PGCnp
DMG:Wockner_2014
6662SOX9CMD1 | CMPD1 | SRA1 | SRXX2 | SRXY10SRY-box 917q24.3CV:PGCnp
PMID:cooccur
9267CYTH1B2-1 | CYTOHESIN-1 | D17S811E | PSCD1 | SEC7cytohesin 117q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
10801SEPT9AF17q25 | MSF | MSF1 | NAPB | PNUTL4 | SINT1 | SeptD1septin 917q25CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23210JMJD6PSR | PTDSR | PTDSR1jumonji domain containing 617q25CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
Chromatin Remodeling Genes
3959LGALS3BP90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90lectin, galactoside-binding, soluble, 3 binding protein17q25CV:PGCnp
DMG:vanEijk_2014
5986RFNG-RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase17q25CV:PGCnp
GO_Annotation
57513CASKIN2ANKS5BCASK interacting protein 217q25.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PROTEIN CLUSTERING
Ascano FMRP targets
29115SAP30BPHCNGP | HTRG | HTRPSAP30 binding protein17q25.1CV:PGCnp
DNM:Xu_2012
CompositeSet
23580CDC42EP4BORG4 | CEP4 | KAIA1777CDC42 effector protein 417q25.1CV:PGCnp
PMID:cooccur
3993LLGL2HGL | Hugl-2 | LGL2lethal giant larvae homolog 2, scribble cell polarity complex component17q25.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8877SPHK1SPHKsphingosine kinase 117q25.2CV:PGCnp
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
64772ENGASE-endo-beta-N-acetylglucosaminidase17q25.3CV:PGCnp
9021SOCS3ATOD4 | CIS3 | Cish3 | SOCS-3 | SSI-3 | SSI3suppressor of cytokine signaling 317q25.3CV:PGCnp
PMID:cooccur
10928RALBP1RIP1 | RLIP1 | RLIP76ralA binding protein 118p11.3CV:PGCnp
DMG:Jaffe_2016
11031RAB31Rab22BRAB31, member RAS oncogene family18p11.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression
INTRACELLULAR TRAFFICKING
7050TGIF1HPE4 | TGIFTGFB induced factor homeobox 118p11.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9984THOC1HPR1 | P84 | P84N5THO complex 118p11.32CV:PGCnp
DMG:Wockner_2014
6093ROCK1P160ROCK | ROCK-IRho associated coiled-coil containing protein kinase 118q11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
8780RIOK3SUDDRIO kinase 318q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
59340HRH4AXOR35 | BG26 | GPCR105 | GPRv53 | H4 | H4R | HH4Rhistamine receptor H418q11.2ADT:Sun_2012
CV:PGCnp
PMID:cooccur
4864NPC1NPCNiemann-Pick disease, type C118q11.2PMID:cooccur
7572ZNF24KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191zinc finger protein 2418q12CV:PGCnp
55034MOCOSHMCS | MCS | MOSmolybdenum cofactor sulfurase18q12CV:PGCnp
DMG:Jaffe_2016
30827CXXC12410002I16Rik | 5830420C16Rik | CFP1 | CGBP | HsT2645 | PCCX1 | PHF18 | SPP1 | ZCGPC1 | hCGBPCXXC finger protein 118q12CV:PGCnpAscano FMRP targets
1837DTNAD18S892E | DRP3 | DTN | DTN-A | LVNC1dystrobrevin alpha18q12CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1825DSC3CDHF3 | DSC | DSC1 | DSC2 | DSC4 | HT-CPdesmocollin 318q12.1CV:PGCnp
5289PIK3C3VPS34 | Vps34 | hVps34phosphatidylinositol 3-kinase catalytic subunit type 318q12.3Association
CV:PGCnp
GR_WM
PMID:cooccur
10892MALT1IMD12 | MLT | MLT1 | PCASP1MALT1 paracaspase18q21CV:PGCnp
DMG:Jaffe_2016
4087SMAD2JV18 | JV18-1 | MADH2 | MADR2 | hMAD-2 | hSMAD2SMAD family member 218q21.1CV:PGCnp
Network
PMID:cooccur
4089SMAD4DPC4 | JIP | MADH4 | MYHRSSMAD family member 418q21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
2531KDSRDHSR | FVT1 | SDR35C13-ketodihydrosphingosine reductase18q21.3CV:PGCnp
596BCL2Bcl-2 | PPP1R50B-cell CLL/lymphoma 218q21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
5205ATP8B1ATPIC | BRIC | FIC1 | ICP1 | PFIC | PFIC1ATPase phospholipid transporting 8B118q21.31CV:PGCnp
CV:PheWAS
4155MBP-myelin basic protein18q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
4772NFATC1NF-ATC | NF-ATc1.2 | NFAT2 | NFATcnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 118q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
Network
23770FKBP8FKBP38 | FKBPr38FK506 binding protein 819p12CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
9534ZNF254BMZF-5 | HD-ZNF1 | ZNF539 | ZNF91Lzinc finger protein 25419p12DMG:Wockner_2014
9244CRLF1CISS | CISS1 | CLF | CLF-1 | NR6 | zcytor5cytokine receptor-like factor 119p12CV:PGCnp
DMG:Wockner_2014
6449SGTASGT | alphaSGT | hSGTsmall glutamine rich tetratricopeptide repeat containing alpha19p13CV:PGCnp
DMG:Jaffe_2016
773CACNA1AAPCA | BI | CACNL1A4 | CAV2.1 | EA2 | FHM | HPCA | MHP | MHP1 | SCA6calcium voltage-gated channel subunit alpha1 A19p13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6618SNAPC2PTFDELTA | SNAP45small nuclear RNA activating complex polypeptide 219p13CV:PGCnp
DMG:Wockner_2014
10755GIPC1C19orf3 | GIPC | GLUT1CBP | Hs.6454 | IIP-1 | NIP | RGS19IP1 | SEMCAP | SYNECTIIN | SYNECTIN | TIP-2GIPC PDZ domain containing family member 119p13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2063NR2F6EAR-2 | EAR2 | ERBAL2nuclear receptor subfamily 2 group F member 619p13.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
4650MYO9BCELIAC4 | MYR5myosin IXB19p13.1Association
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
Ascano FMRP targets
3718JAK3JAK-3 | JAK3_HUMAN | JAKL | L-JAK | LJAKJanus kinase 319p13.1CV:PGCnp
5143PDE4CDPDE1phosphodiesterase 4C19p13.11CV:PGCnp
PMID:cooccur
10365KLF2LKLFKruppel-like factor 219p13.11CV:PGCnp
PMID:cooccur
84705GTPBP3COXPD23 | GTPBG3 | MSS1 | MTGP1 | THDF1GTP binding protein 3 (mitochondrial)19p13.11CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
CompositeSet
5976UPF1HUPF1 | NORF1 | RENT1 | pNORF1 | smg-2UPF1, RNA helicase and ATPase19p13.11CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
26993AKAP8LHA95 | HAP95 | NAKAP | NAKAP95A-kinase anchoring protein 8 like19p13.12CV:PGCnp
DMG:Jaffe_2016
140467ZNF358ZFENDzinc finger protein 35819p13.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
4125MAN2B1LAMAN | MANBmannosidase alpha class 2B member 119p13.2CV:PGCnp
DMG:Montano_2016
7297TYK2IMD35 | JTK1tyrosine kinase 219p13.2CV:PGCnp
DMG:Jaffe_2016
2057EPOREPO-Rerythropoietin receptor19p13.2GO_Annotation
PMID:cooccur
9592IER2ETR101immediate early response 219p13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
3949LDLRFH | FHC | LDLCQ2low density lipoprotein receptor19p13.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
9361LONP1CODASS | LON | LONP | LonHS | PIM1 | PRSS15 | hLONlon peptidase 1, mitochondrial19p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Ascano FMRP targets
3383ICAM1BB2 | CD54 | P3.58intercellular adhesion molecule 119p13.2CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:McCarthy_2014
3727JUNDAP-1jun D proto-oncogene19p13.2CV:PGCnp
PMID:cooccur
4782NFICCTF | CTF5 | NF-I | NFInuclear factor I/C (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
5725PTBP1HNRNP-I | HNRNPI | HNRPI | PTB | PTB-1 | PTB-T | PTB2 | PTB3 | PTB4 | pPTBpolypyrimidine tract binding protein 119p13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression
10362HMG20BBRAF25 | BRAF35 | HMGX2 | HMGXB2 | PP7706 | SMARCE1r | SOXL | pp8857high mobility group 20B19p13.3DMG:Jaffe_2016Chromatin Remodeling Genes
8498RANBP3-RAN binding protein 319p13.3CV:PGCnp
DMG:Jaffe_2016
2593GAMTCCDS2 | HEL-S-20 | PIG2 | TP53I2guanidinoacetate N-methyltransferase19p13.3CV:PGCnp
DEG:Sanders_2013
8174MADCAM1MACAM1mucosal vascular addressin cell adhesion molecule 119p13.3DMG:Jaffe_2016
8175SF3A2PRP11 | PRPF11 | SAP62 | SF3a66splicing factor 3a subunit 219p13.3CV:PGCnp
4616GADD45BGADD45BETA | MYD118growth arrest and DNA damage inducible beta19p13.3CV:PGCnp
PMID:cooccur
53615MBD3-methyl-CpG binding domain protein 319p13.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
8570KHSRPFBP2 | FUBP2 | KSRPKH-type splicing regulatory protein19p13.3CV:PGCnp
DMG:Wockner_2014
6794STK11LKB1 | PJS | hLKB1serine/threonine kinase 1119p13.3CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
5605MAP2K2CFC4 | MAPKK2 | MEK2 | MKK2 | PRKMK2mitogen-activated protein kinase kinase 219p13.3DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
DOPAMINE
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
9322TRIP10CIP4 | HSTP | STOT | STP | TRIP-10thyroid hormone receptor interactor 1019p13.3DMG:Wockner_2014
6915TBXA2RBDPLT13 | TXA2-Rthromboxane A2 receptor19p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
26528DAZAP1-DAZ associated protein 119p13.3CV:PGCnp
DMG:Montano_2016
PMID:cooccur
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
5609MAP2K7JNKK2 | MAPKK7 | MEK | MEK 7 | MKK7 | PRKMK7 | SAPKK-4 | SAPKK4mitogen-activated protein kinase kinase 719p13.3-p13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
SEROTONIN
G2Cdb.humanNRC
G2Cdb.humanPSP
3643INSRCD220 | HHF5insulin receptor19p13.3-p13.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Ascano FMRP targets
6141RPL18L18ribosomal protein L1819q13CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
7392USF2FIP | bHLHb12upstream transcription factor 2, c-fos interacting19q13CV:PGCnp
DMG:Wockner_2014
2077ERFCRS4 | PE-2 | PE2ETS2 repressor factor19q13CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
22933SIRT2SIR2 | SIR2L | SIR2L2sirtuin 219q13CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
587BCAT2BCAM | BCATM | BCT2 | PP18branched chain amino acid transaminase 219q13CV:PGCnp
GO_Annotation
7040TGFB1CED | DPD1 | LAP | TGFB | TGFbetatransforming growth factor beta 119q13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
1050CEBPAC/EBP-alpha | CEBPCCAAT/enhancer binding protein alpha19q13.1CV:PGCnp
933CD22SIGLEC-2 | SIGLEC2CD22 molecule19q13.1CV:PGCnp
DMG:Wockner_2014
Network
26065LSM14AC19orf13 | FAM61A | RAP55 | RAP55ALSM14A mRNA processing body assembly factor19q13.11CV:PGCnp
112398EGLN2EIT6 | HIF-PH1 | HIFPH1 | HPH-1 | HPH-3 | PHD1egl-9 family hypoxia-inducible factor 219q13.2DMG:Wockner_2014
29946SERTAD3RBT1SERTA domain containing 319q13.2DMG:Jaffe_2016
11100HNRNPUL1E1B-AP5 | E1BAP5 | HNRPUL1heterogeneous nuclear ribonucleoprotein U-like 119q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
4059BCAMAU | CD239 | LU | MSK19basal cell adhesion molecule (Lutheran blood group)19q13.2DMG:Wockner_2014
2828GPR4-G protein-coupled receptor 419q13.3CV:PGCnp
DMG:Wockner_2014
2524FUT2B12QTL1 | SE | SEC2 | Se2 | sejfucosyltransferase 219q13.3CV:PGCnp
22809ATF5ATFX | HMFN0395activating transcription factor 519q13.3CV:PGCnp
PMID:cooccur
55769ZNF83HPF1 | ZNF816Bzinc finger protein 8319q13.3CV:PGCnp
DMG:Wockner_2014
23521RPL13AL13A | TSTA1ribosomal protein L13a19q13.3CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
1760DMPKDM | DM1 | DM1PK | DMK | MDPK | MT-PKdystrophia myotonica protein kinase19q13.3CV:PGCnp
PMID:cooccur
25865PRKD2HSPC187 | PKD2 | nPKC-D2protein kinase D219q13.3CV:PGCnp
DMG:Wockner_2014
11129CLASRPCLASP | SFRS16 | SWAP2CLK4-associating serine/arginine rich protein19q13.3CV:PGCnp
6625SNRNP70RNPU1Z | RPU1 | SNRP70 | Snp1 | U1-70K | U170K | U1AP | U1RNPsmall nuclear ribonucleoprotein U1 subunit 7019q13.3CV:PGCnp
10055SAE1AOS1 | HSPC140 | SUA1 | UBLE1ASUMO1 activating enzyme subunit 119q13.32CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
23211ZC3H4C19orf7zinc finger CCCH-type containing 419q13.32CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10848PPP1R13LIASPP | NKIP1 | RAI | RAI4protein phosphatase 1 regulatory subunit 13 like19q13.32CV:PGCnp
DMG:Wockner_2014
2512FTLLFTD | NBIA3ferritin, light polypeptide19q13.33PMID:cooccur
6689SPIBSPI-BSpi-B transcription factor19q13.33CV:PGCnp
DNM:Xu_2012
CompositeSet
51070NOSIPCGI-25nitric oxide synthase interacting protein19q13.33CV:PGCnp
DMG:Jaffe_2016
3661IRF3IIAE7interferon regulatory factor 319q13.33CV:PGCnp
PMID:cooccur
9422ZNF264-zinc finger protein 26419q13.4DMG:Jaffe_2016
7593MZF1MZF-1 | MZF1B | ZFP98 | ZNF42 | ZSCAN6myeloid zinc finger 119q13.4CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5794PTPRHR-PTP-H | SAP1protein tyrosine phosphatase, receptor type H19q13.4CV:PGCnp
353514LILRA5CD85 | CD85F | ILT-11 | ILT11 | LILRB7 | LIR-9 | LIR9leukocyte immunoglobulin like receptor A519q13.4DMG:vanEijk_2014
10520ZNF211C2H2-25 | CH2H2-25 | ZNF-25 | ZNFC25zinc finger protein 21119q13.4CV:PGCnp
DMG:Wockner_2014
11338U2AF2U2AF65U2 small nuclear RNA auxiliary factor 219q13.42CV:PGCnp
DMG:Jaffe_2016
Network
27300ZNF544-zinc finger protein 54419q13.43CV:PGCnp
DMG:Wockner_2014
6195RPS6KA1HU-1 | MAPKAPK1A | RSK | RSK1 | p90Rskribosomal protein S6 kinase A11pCV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
965CD58LFA-3 | LFA3 | ag3CD58 molecule1p13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_I
GSMA_IIA
64783RBM15OTT | OTT1 | SPENRNA binding motif protein 151p13CV:PGCnp
GSMA_I
10100TSPAN2NET3 | TSN2 | TSPAN-2tetraspanin 21p13.2CV:PGCnp
GSMA_I
GSMA_IIA
1435CSF1CSF-1 | MCSFcolony stimulating factor 11p13.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
23443SLC35A3AMRSsolute carrier family 35 member A31p21CV:PGCnp
DMG:Wockner_2014
51611DPH5AD-018 | CGI-30 | HSPC143 | NPD015diphthamide biosynthesis 51p21.2CV:PGCnp
DMG:Nishioka_2013
7812CSDE1D1S155E | UNRcold shock domain containing E11p22CV:PGCnp
GSMA_I
GSMA_IIA
1486CTBSCTBchitobiase1p22CV:PGCnp
PMID:cooccur
6125RPL5DBA6 | L5 | MSTP030 | PPP1R135ribosomal protein L51p22.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2633GBP1-guanylate binding protein 11p22.2CV:PGCnp
PMID:cooccur
2634GBP2-guanylate binding protein 21p22.2CV:PGCnp
DEG:Sanders_2013
55970GNG12-G protein subunit gamma 121p31.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
1376CPT2CPT1 | CPTASE | IIAE4carnitine palmitoyltransferase 21p32CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
23499MACF1ABP620 | ACF7 | MACF | OFC4microtubule-actin crosslinking factor 11p32-p31CV:GWASdb
CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9202ZMYM4CDIR | MYM | ZNF198L3 | ZNF262zinc finger MYM-type containing 41p32-p34CV:PGCnp
CV:PheWAS
4520MTF1MTF-1 | ZRFmetal-regulatory transcription factor 11p33CV:PGCnp
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
5792PTPRFBNAH2 | LARprotein tyrosine phosphatase, receptor type F1p34CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
3065HDAC1GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 11p34CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
64121RRAGCGTR2 | RAGC | TIB929Ras related GTP binding C1p34CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3652IPPKLHL27intracisternal A particle-promoted polypeptide1p34-p32CV:PGCnp
PMID:cooccur
8704B4GALT2B4Gal-T2 | B4Gal-T3 | beta4Gal-T2UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 21p34-p33CV:PGCnp
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
1296COL8A2FECD | FECD1 | PPCD | PPCD2collagen type VIII alpha 21p34.2CV:PGCnp
6513SLC2A1CSE | DYT17 | DYT18 | DYT9 | EIG12 | GLUT | GLUT-1 | GLUT1 | GLUT1DS | HTLVR | PED | SDCHCNsolute carrier family 2 member 11p34.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
CELL METABOLISM
1912PHC2EDR2 | HPH2 | PH2polyhomeotic homolog 21p34.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Chromatin Remodeling Genes
10946SF3A3PRP9 | PRPF9 | SAP61 | SF3a60splicing factor 3a subunit 31p34.3CV:PGCnp
200081TXLNAIL14 | TXLNtaxilin alpha1p35.1CV:PGCnp
DMG:vanEijk_2014
23633KPNA6IPOA7 | KPNA7karyopherin subunit alpha 61p35.1CV:PGCnp
DMG:Nishioka_2013
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
11079RER1-retention in endoplasmic reticulum sorting receptor 11p36CV:PGCnp
23013SPENHIAA0929 | MINT | RBM15C | SHARPspen family transcriptional repressor1p36CV:PGCnp
DMG:Nishioka_2013
CompositeSet
Darnell FMRP targets
26119LDLRAP1ARH | ARH1 | ARH2 | FHCB1 | FHCB2low density lipoprotein receptor adaptor protein 11p36.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
10726NUDCHNUDC | MNUDC | NPD011nudC nuclear distribution protein1p36.11CV:PGCnp
DMG:Nishioka_2013
2810SFNYWHASstratifin1p36.11CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
84196USP48RAP1GA1 | USP31ubiquitin specific peptidase 481p36.12CV:PGCnp
7709ZBTB17MIZ-1 | ZNF151 | ZNF60 | pHZ-67zinc finger and BTB domain containing 171p36.13CV:PGCnp
DMG:Jaffe_2016
3399ID3HEIR-1 | bHLHb25inhibitor of DNA binding 3, HLH protein1p36.13-p36.12CV:PGCnp
PMID:cooccur
7799PRDM2HUMHOXY1 | KMT8 | MTB-ZF | RIZ | RIZ1 | RIZ2PR domain 21p36.21CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
842CASP9APAF-3 | APAF3 | ICE-LAP6 | MCH6 | PPP1R56caspase 91p36.21DMG:Wockner_2014
26232FBXO2FBG1 | FBX2 | Fbs1 | NFB42 | OCP1F-box protein 21p36.22CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
80176SPSB1SSB-1 | SSB1splA/ryanodine receptor domain and SOCS box containing 11p36.22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
375790AGRNCMS8 | CMSPPDagrin1p36.33CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Darnell FMRP targets
65220NADKdJ283E3.1NAD kinase1p36.33CV:PGCnp
DMG:Wockner_2014
8515ITGA10PRO827integrin subunit alpha 101q21CNV:YES
GSMA_I
GSMA_IIA
3570IL6RCD126 | IL-6R-1 | IL-6RA | IL6Q | IL6RA | IL6RQ | gp80interleukin 6 receptor1q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
5298PI4KBNPIK | PI4K-BETA | PI4K92 | PI4KBETA | PI4KIIIBETA | PIK4CBphosphatidylinositol 4-kinase beta1q21CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
6282S100A11HEL-S-43 | MLN70 | S100CS100 calcium binding protein A111q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
6283S100A12CAAF1 | CAGC | CGRP | ENRAGE | MRP-6 | MRP6 | p6S100 calcium binding protein A121q21GSMA_I
GSMA_IIA
PMID:cooccur
1942EFNA1B61 | ECKLG | EFL1 | EPLG1 | LERK-1 | LERK1 | TNFAIP4ephrin-A11q21-q22CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
10623POLR3CRPC3 | RPC62polymerase (RNA) III subunit C1q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
9939RBM8ABOV-1A | BOV-1B | BOV-1C | C1DELq21.1 | DEL1q21.1 | MDS014 | RBM8 | RBM8B | TAR | Y14 | ZNRP | ZRNP1RNA binding motif protein 8A1q21.1CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
5872RAB13GIG4RAB13, member RAS oncogene family1q21.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
8349HIST2H2BEGL105 | H2B | H2B.1 | H2BFQ | H2BGL105 | H2BQhistone cluster 2, H2be1q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
10903MTMR11CRAmyotubularin related protein 111q21.2CV:PGCnp
GSMA_I
GSMA_IIA
3782KCNN3KCa2.3 | SK3 | SKCA3 | hSK3potassium calcium-activated channel subfamily N member 31q21.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
23126POGZMRD37 | WHSUS | ZNF280E | ZNF635 | ZNF635mpogo transposable element with ZNF domain1q21.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
CompositeSet
8394PIP5K1A-phosphatidylinositol-4-phosphate 5-kinase, type I, alpha1q21.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
GSMA_IIA
2224FDPSFPPS | FPS | POROK9farnesyl diphosphate synthase1q22CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
4000LMNACDCD1 | CDDC | CMD1A | CMT2B1 | EMD2 | FPL | FPLD | FPLD2 | HGPS | IDC | LDP1 | LFP | LGMD1B | LMN1 | LMNC | LMNL1 | PRO1lamin A/C1q22CV:PGCnp
Expression
GSMA_I
GSMA_IIA
Network
PMID:cooccur
6258RXRGNR2B3 | RXRCretinoid X receptor gamma1q22-q23CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
63923TNNTN-Wtenascin N1q23-q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
60484HAPLN2BRAL1hyaluronan and proteoglycan link protein 21q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
3068HDGFHMG1L2hepatoma-derived growth factor1q23.1CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
4921DDR2MIG20a | NTRKR3 | TKT | TYRO10discoidin domain receptor tyrosine kinase 21q23.3CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
6504SLAMF1CD150 | CDw150 | SLAMsignaling lymphocytic activation molecule family member 11q23.3CV:GWAScat
CV:GWASdb
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
5396PRRX1AGOTC | PHOX1 | PMX1 | PRX-1 | PRX1paired related homeobox 11q24CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
6004RGS16A28-RGS14 | A28-RGS14P | RGS-Rregulator of G-protein signaling 161q25-q31CV:PGCnp
Network
PMID:cooccur
27252KLHL20KHLHX | KLEIP | KLHLXkelch like family member 201q25.1CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9588PRDX61-Cys | AOP2 | HEL-S-128m | NSGPx | PRX | aiPLA2 | p29peroxiredoxin 61q25.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
60676PAPPA2PAPP-A2 | PAPP-E | PAPPE | PLAC3pappalysin 21q25.2CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
9857CEP350CAP350 | GM133centrosomal protein 350kDa1q25.2CV:PGCnp
DMG:Jaffe_2016
63827BCANBEHAB | CSPG7brevican1q31CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
140609NEK7-NIMA related kinase 71q31.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
1378CR1C3BR | C4BR | CD35 | KNcomplement component 3b/4b receptor 1 (Knops blood group)1q32CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
5549PRELPMST161 | MSTP161 | SLRR2Aproline/arginine-rich end leucine-rich repeat protein1q32CV:GWASdb
CV:PGCnp
9261MAPKAPK2MAPKAP-K2 | MK-2 | MK2mitogen-activated protein kinase-activated protein kinase 21q32CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
9580SOX13ICA12 | Sox-13SRY-box 131q32CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
5287PIK3C2BC2-PI3Kphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta1q32CV:PGCnp
DNM:Fromer_2014
CompositeSet
7832BTG2PC3 | TIS21BTG family member 21q32CV:PGCnp
PMID:cooccur
5929RBBP5RBQ3 | SWD1retinoblastoma binding protein 51q32CV:PGCnp
DNM:Gulsuner_2013
Chromatin Remodeling Genes
23114NFASCNF | NRCAMLneurofascin1q32.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
29937NENFCIR2 | SCIRP10 | SPUFneudesin neurotrophic factor1q32.3CV:PGCnp
DMG:Jaffe_2016
2058EPRSEARS | GLUPRORS | PARS | PIG32 | QARS | QPRSglutamyl-prolyl-tRNA synthetase1q41GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
5629PROX1-prospero homeobox 11q41CV:GWASdb
CV:PGCnp
PMID:cooccur
1130LYSTCHS | CHS1lysosomal trafficking regulator1q42.1-q42.2CV:PGCnp
DMG:Wockner_2014
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3707ITPKBIP3-3KB | IP3K | IP3K-B | IP3KB | PIG37inositol-trisphosphate 3-kinase B1q42.13CV:PGCnp
DMG:Wockner_2014
Network
51742ARID4BBCAA | BRCAA1 | RBBP1L1 | RBP1L1 | SAP180AT-rich interaction domain 4B1q42.3CV:PGCnp
DMG:Wockner_2014
4811NID1NIDnidogen 11q43CV:GWASdb
CV:PGCnp
9453GGPS1GGPPS | GGPPS1geranylgeranyl diphosphate synthase 11q43CV:PGCnp
DMG:Nishioka_2013
25909AHCTF1ELYS | MST108 | MSTP108 | TMBS62AT-hook containing transcription factor 11q44CV:PGCnp
10000AKT3MPPH | MPPH2 | PKB-GAMMA | PKBG | PRKBG | RAC-PK-gamma | RAC-gamma | STK-2v-akt murine thymoma viral oncogene homolog 31q44CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
CompositeSet
Darnell FMRP targets
7692ZNF133ZNF150 | pHZ-13 | pHZ-66zinc finger protein 13320p11.23CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
Ascano FMRP targets
6238RRBP1ES/130 | ES130 | RRp | hESribosome binding protein 120p12CV:PGCnp
Expression
GSMA_I
RNA AND PROTEIN SYNTHESIS
Ascano FMRP targets
11237RNF24G1Lring finger protein 2420p13CV:PGCnp
54498SMOXC20orf16 | PAO | PAO-1 | PAO1 | PAOH | PAOH1 | SMOspermine oxidase20p13CV:PGCnp
DMG:Wockner_2014
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
57761TRIB3C20orf97 | NIPK | SINK | SKIP3 | TRB3tribbles pseudokinase 320p13-p12.2CV:PGCnp
Network
PMID:cooccur
5933RBL1CP107 | PRB1 | p107retinoblastoma-like 120q11.2CV:PGCnp
DMG:Jaffe_2016
6640SNTA1LQT12 | SNT1 | TACIP1 | dJ1187J4.5syntrophin alpha 120q11.2CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
9371KIF3BFLA8 | HH0048 | KLP-11kinesin family member 3B20q11.21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
22913RALYHNRPCL2 | P542RALY heterogeneous nuclear ribonucleoprotein20q11.21-q11.23CV:PGCnp
60436TGIF2-TGFB induced factor homeobox 220q11.23CV:PGCnp
DMG:Wockner_2014
23051ZHX3TIX1zinc fingers and homeoboxes 320q12CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6780STAU1PPP1R150 | STAUstaufen double-stranded RNA binding protein 120q13.1CV:PGCnp
Network
PMID:cooccur
Potential synaptic genes
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
5740PTGISCYP8 | CYP8A1 | PGIS | PTGIprostaglandin I2 (prostacyclin) synthase20q13.13CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Ambalavanan_2016
55661DDX27DRS1 | Drs1p | HSPC259 | PP3241 | RHLP | dJ686N3.1DEAD-box helicase 2720q13.13CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
1002CDH4CAD4 | R-CAD | RCADcadherin 420q13.3CV:GWASdb
CV:PGCnp
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
55544RBM38HSRNASEB | RNPC1 | SEB4B | SEB4D | dJ800J21.2RNA binding motif protein 3820q13.31CV:GWASdb
CV:PGCnp
55738ARFGAP1ARF1GAP | HRIHFB2281ADP ribosylation factor GTPase activating protein 120q13.33CV:PGCnpEXOCYTOSIS
26205GMEB2GMEB-2 | P79PIF | PIF79glucocorticoid modulatory element binding protein 220q13.33CV:PGCnpAscano FMRP targets
79144PPDPFC20orf149 | dJ697K14.9 | exdpfpancreatic progenitor cell differentiation and proliferation factor20q13.33CV:PGCnp
PMID:cooccur
56731SLC2A4RGGEF | HDBP-1 | HDBP1 | Si-1-2 | Si-1-2-19SLC2A4 regulator20q13.33CV:PGCnp
7179TPTECT44 | PTEN2transmembrane phosphatase with tensin homology21p11CV:GWAScat
CV:GWASdb
PMID:cooccur
10950BTG3ANA | TOB5 | TOB55 | TOFABTG family member 321q21.1CV:PGCnp
DMG:Jaffe_2016
54149C21orf91C21orf14 | C21orf38 | CSSG1 | EURL | YG81chromosome 21 open reading frame 9121q21.1CV:PGCnp
351APPAAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2amyloid beta precursor protein21q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
29980DONSONB17 | C21orf60downstream neighbor of SON21q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
PMID:cooccur
57466SCAF4SFRS15 | SRA4SR-related CTD associated factor 421q22.1CV:PGCnp
6453ITSN1ITSN | SH3D1A | SH3P17intersectin 121q22.1-q22.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
3772KCNJ15IRKK | KIR1.3 | KIR4.2potassium voltage-gated channel subfamily J member 1521q22.2CV:PGCnp
DMG:Wockner_2014
1292COL6A2BTHLM1 | PP3610 | UCMD1collagen type VI alpha 221q22.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
64699TMPRSS3DFNB10 | DFNB8 | ECHOS1 | TADG12transmembrane protease, serine 321q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
754PTTG1IPC21orf1 | C21orf3 | PBFpituitary tumor-transforming 1 interacting protein21q22.3DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
4600MX2MXBMX dynamin like GTPase 221q22.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23181DIP2AC21orf106 | DIP2disco interacting protein 2 homolog A21q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
3275PRMT2HRMT1L1protein arginine methyltransferase 221q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
4047LSSCTRCT44 | OSClanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)21q22.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
6612SUMO3SMT3A | SMT3H1 | SUMO-3 | Smt3Bsmall ubiquitin-like modifier 321q22.3DEG:Zhao_2015
4668NAGAD22S674 | GALBN-acetylgalactosaminidase, alpha-22q11CV:GWASdb
CV:PGCnp
51807TUBA8TUBAL2tubulin alpha 822q11.1Association
CV:PGCnp
GSMA_I
PMID:cooccur
1312COMTHEL-S-98ncatechol-O-methyltransferase22q11.21Association
CNV:YES
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
DOPAMINE
1399CRKL-v-crk avian sarcoma virus CT10 oncogene homolog-like22q11.21CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
Network
5594MAPK1ERK | ERK-2 | ERK2 | ERT1 | MAPK2 | P42MAPK | PRKM1 | PRKM2 | p38 | p40 | p41 | p41mapk | p42-MAPKmitogen-activated protein kinase 122q11.21CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7122CLDN5AWAL | BEC1 | CPETRL1 | TMVCFclaudin 522q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
6576SLC25A1CTP | D2L2AD | SEA | SLC20A3solute carrier family 25 member 122q11.21CNV:YES
CV:PGCnp
DNM:Gulsuner_2013
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_mitochondria
8216LZTR1BTBD29 | LZTR-1 | NS10 | SWNTS2leucine-zipper-like transcription regulator 122q11.21|22q11.1-q11.2CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
8220DGCR14DGCR13 | DGS-H | DGS-I | DGSH | DGSI | ES2 | Es2elDiGeorge syndrome critical region gene 1422q11.21|22q11.2Association
CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
9647PPM1FCAMKP | CaMKPase | FEM-2 | POPX2 | hFEM-2protein phosphatase, Mg2+/Mn2+ dependent 1F22q11.22CV:GWASdb
CV:PGCnp
GSMA_I
2781GNAZ-G protein subunit alpha z22q11.22GSMA_I
Network
PMID:cooccur
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2953GSTT2-glutathione S-transferase theta 2 (gene/pseudogene)22q11.23CV:PGCnp
Expression
GSMA_I
PMID:cooccur
23780APOL2APOL-II | APOL3apolipoprotein L222q12CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
7494XBP1TREB-5 | TREB5 | XBP-1 | XBP2X-box binding protein 122q12.1|22q12Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
10634GAS2L1GAR22growth arrest specific 2 like 122q12.2GSMA_I
PMID:cooccur
9514GAL3ST1CSTgalactose-3-O-sulfotransferase 122q12.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
23541SEC14L2C22orf6 | SPF | TAP | TAP1SEC14 like lipid binding 222q12.2CV:PGCnp
GSMA_I
3985LIMK2-LIM domain kinase 222q12.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
2130EWSR1EWS | EWS-FLI1 | bK984G1.4EWS RNA binding protein 122q12.2CV:PGCnp
GSMA_I
Network
23598PATZ1MAZR | PATZ | RIAZ | ZBTB19 | ZNF278 | ZSG | dJ400N23POZ/BTB and AT hook containing zinc finger 122q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
6721SREBF2SREBP-2 | SREBP2 | bHLHd2sterol regulatory element binding transcription factor 222q13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
5905RANGAP1Fug1 | RANGAP | SDRan GTPase activating protein 122q13CV:PGCnp
PMID:cooccur
7477WNT7B-wingless-type MMTV integration site family member 7B22q13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10043TOM1-target of myb1 membrane trafficking protein22q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
9463PICK1PICK | PRKCABPprotein interacting with PRKCA 122q13.1Association
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3162HMOX1HMOX1D | HO-1 | HSP32 | bK286B10heme oxygenase 122q13.1CV:PGCnp
PMID:cooccur
4151MBPVALB | myoglobginmyoglobin22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
25777SUN2UNC84BSad1 and UNC84 domain containing 222q13.1CV:PGCnp
23467NPTXRNPRneuronal pentraxin receptor22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11078TRIOBPDFNB28 | HRIHFB2122 | TAP68 | TARA | dJ37E16.4TRIO and F-actin binding protein22q13.1DEG:Maycox_2009
PMID:cooccur
1454CSNK1ECKIepsilon | HCKIEcasein kinase 1 epsilon22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
4357MPSTMST | TST2 | TUM1mercaptopyruvate sulfurtransferase22q13.1CV:PGCnp
DMG:Nishioka_2013
8398PLA2G6CaI-PLA2 | GVI | INAD1 | IPLA2-VIA | NBIA2 | NBIA2A | NBIA2B | PARK14 | PLA2 | PNPLA9 | iPLA2 | iPLA2betaphospholipase A2 group VI22q13.1Association
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
2033EP300KAT3B | RSTS2 | p300E1A binding protein p30022q13.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
10766TOB2TOB4 | TOBL | TROB2transducer of ERBB2, 222q13.2CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
23264ZC3H7BRoXaNzinc finger CCCH-type containing 7B22q13.2CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
11252PACSIN2SDPIIprotein kinase C and casein kinase substrate in neurons 222q13.2-q13.33CV:PGCnp
DEG:Sanders_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
706TSPOBPBS | BZRP | DBI | IBP | MBR | PBR | PBS | PKBS | PTBR | mDRC | pk18translocator protein22q13.31ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
23774BRD1BRL | BRPF1 | BRPF2bromodomain containing 122q13.33Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
23209MLC1LVM | MLC | VLmegalencephalic leukoencephalopathy with subcortical cysts 122q13.33Association
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
6300MAPK12ERK-6 | ERK3 | ERK6 | MAPK 12 | P38GAMMA | PRKM12 | SAPK-3 | SAPK3mitogen-activated protein kinase 1222q13.33CV:PGCnp
DMG:Nishioka_2013
23654PLXNB2MM1 | Nbla00445 | PLEXB2 | dJ402G11.3plexin B222q13.33CV:PGCnp
GO_Annotation
Ascano FMRP targets
6942TCF20AR1 | SPBP | TCF-20transcription factor 20 (AR1)22q13.3|22q13.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
83439TCF7L1TCF-3 | TCF3transcription factor 7 like 12p11.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
55818KDM3AJHDM2A | JHMD2A | JMJD1 | JMJD1A | TSGAlysine demethylase 3A2p11.2CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
Chromatin Remodeling Genes
5068REG3AHIP | HIP/PAP | INGAP | PAP | PAP-H | PAP1 | PBCGF | REG-III | REG3regenerating family member 3 alpha2p12CV:GWASdb
CV:PGCnp
7840ALMS1ALSSALMS1, centrosome and basal body associated protein2p13CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
Ascano FMRP targets
9792SERTAD2Sei-2 | TRIP-Br2SERTA domain containing 22p14CV:PGCnp
DMG:Jaffe_2016
2202EFEMP1DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5EGF containing fibulin-like extracellular matrix protein 12p16CV:PGCnp
PMID:cooccur
4528MTIF2-mitochondrial translational initiation factor 22p16.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
7444VRK2-vaccinia related kinase 22p16.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
23198PSME4PA200proteasome activator subunit 42p16.2CV:PGCnp
80204FBXO11FBX11 | PRMT9 | UBR6 | UG063H01 | VIT1F-box protein 112p16.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
23433RHOQARHQ | HEL-S-42 | RASL7A | TC10 | TC10Aras homolog family member Q2p21CV:PGCnp
9637FEZ2HUM3CLfasciculation and elongation protein zeta 22p21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
5610EIF2AK2EIF2AK1 | PKR | PPP1R83 | PRKReukaryotic translation initiation factor 2 alpha kinase 22p22-p21CV:PGCnp
PMID:cooccur
678ZFP36L2BRF2 | ERF-2 | ERF2 | RNF162C | TIS11DZFP36 ring finger protein-like 22p22.3-p21CV:PGCnp
DMG:Montano_2016
3030HADHAECHA | GBP | HADH | LCEH | LCHAD | MTPA | TP-ALPHAhydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit2p23CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
109ADCY3AC-III | AC3adenylate cyclase 32p23.3CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
Ascano FMRP targets
7349UCNUI | UROCurocortin2p23.3DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
51594NBASILFS2 | NAG | SOPHneuroblastoma amplified sequence2p24CV:PGCnpAscano FMRP targets
64342HS1BP3ETM2 | HS1-BP3HCLS1 binding protein 32p24.1CV:PGCnp
4613MYCNMODED | N-myc | NMYC | ODED | bHLHe37v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog2p24.3CV:PGCnp
DMG:Jaffe_2016
4953ODC1ODCornithine decarboxylase 12p25CV:PGCnp
DMG:Nishioka_2013
23175LPIN1PAP1lipin 12p25.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
54910SEMA4CM-SEMA-F | SEMACL1 | SEMAF | SEMAIsemaphorin 4C2q11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
Network
51011FAHD2ACGI-105fumarylacetoacetate hydrolase domain containing 2A2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6549SLC9A2NHE2solute carrier family 9 member A22q11.2CV:PGCnp
GSMA_I
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
3552IL1AIL-1A | IL1 | IL1-ALPHA | IL1F1interleukin 1 alpha2q14Association
CV:GWAScat
CV:GWASdb
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
2736GLI2CJS | HPE9 | PHS2 | THP1 | THP2GLI family zinc finger 22q14CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
274BIN1AMPH2 | AMPHL | SH3P9bridging integrator 12q14CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
8886DDX18MrDbDEAD-box helicase 182q14.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
Ascano FMRP targets
1615DARSHBSL | aspRSaspartyl-tRNA synthetase2q21.3GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
23518R3HDM1R3HDMR3H domain containing 12q21.3DMG:Nishioka_2013
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
55660PRPF40AFBP-11 | FBP11 | FLAF1 | FNBP3 | HIP-10 | HIP10 | HYPA | NY-REN-6 | Prp40pre-mRNA processing factor 40 homolog A2q23.3CV:PGCnp
Expression
GSMA_IIA
Network
Ascano FMRP targets
5937RBMS1C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1RNA binding motif, single stranded interacting protein 12q24.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
29994BAZ2BWALp4bromodomain adjacent to zinc finger domain 2B2q24.2CV:PGCnp
GSMA_IIA
57818G6PC2IGRPglucose-6-phosphatase catalytic subunit 22q24.3CV:GWASdb
CV:PGCnp
Expression
GSMA_IIA
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
7273TTNCMD1G | CMH9 | CMPD4 | EOMFC | HMERF | LGMD2J | MYLK5 | TMDtitin2q31CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
Network
CompositeSet
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
6744SSFA2CS-1 | CS1 | KRAP | SPAG13sperm specific antigen 22q31.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8609KLF7UKLFKruppel-like factor 7 (ubiquitous)2q32CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
66008TRAK2ALS2CR3 | CALS-C | GRIF-1 | GRIF1 | MILT2 | OIP98trafficking protein, kinesin binding 22q33CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
5334PLCL1PLCE | PLCL | PLDL1 | PPP1R127 | PRIPphospholipase C like 12q33CV:PGCnp
DMG:Jaffe_2016
2825GPR1-G protein-coupled receptor 12q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
8828NRP2NP2 | NPN2 | PRO2714 | VEGF165R2neuropilin 22q33.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
2066ERBB4ALS19 | HER4 | p180erbB4erb-b2 receptor tyrosine kinase 42q33.3-q34Association
Core
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
Potential synaptic genes
6168RPL37AL37Aribosomal protein L37a2q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
6556SLC11A1LSH | NRAMP | NRAMP1solute carrier family 11 member 12q35CV:GWASdb
GSMA_IIA
GSMA_IIE
10058ABCB6ABC | ABC14 | DUH3 | LAN | MCOPCB7 | MTABC3 | PRP | PSHK2 | umatATP binding cassette subfamily B member 6 (Langereis blood group)2q36GSMA_IIA
GSMA_IIE
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
51665ASB1ASB-1ankyrin repeat and SOCS box containing 12q37CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4735SEPT2DIFF6 | NEDD-5 | NEDD5 | Pnutl3 | hNedd5septin 22q37CV:PGCnp
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3431SP110IFI41 | IFI75 | IPR1 | VODISP110 nuclear body protein2q37.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
5757PTMATMSAprothymosin, alpha2q37.1CV:PGCnp
DMG:Jaffe_2016
9759HDAC4AHO3 | BDMR | HA6116 | HD4 | HDAC-4 | HDAC-A | HDACAhistone deacetylase 42q37.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
9208LRRFIP1FLAP-1 | FLAP1 | FLIIAP1 | GCF-2 | GCF2 | HUFI-1 | TRIPleucine rich repeat (in FLII) interacting protein 12q37.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
8864PER2FASPS | FASPS1period circadian clock 22q37.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
80895ILKAPILKAP2 | ILKAP3 | PP2C-DELTA | PPM1OILK associated serine/threonine phosphatase2q37.3CV:PGCnp
23192ATG4BAPG4B | AUTL1autophagy related 4B cysteine peptidase2q37.3CV:PGCnp
51540SCLYSCL | hSCLselenocysteine lyase2q37.3PMID:cooccur
23429RYBPAAP1 | APAP-1 | DEDAF | YEAF1RING1 and YY1 binding protein3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
4286MITFCMM8 | MI | WS2 | WS2A | bHLHe32microphthalmia-associated transcription factor3p13CV:PGCnp
PMID:cooccur
56999ADAMTS9-ADAM metallopeptidase with thrombospondin type 1 motif 93p14.1CV:GWASdb
CV:PGCnp
23272FAM208AC3orf63 | RAP140 | se89-1family with sequence similarity 208 member A3p14.3CV:PGCnp
55193PBRM1BAF180 | PB1polybromo 13p21CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
Chromatin Remodeling Genes
1605DAG1156DAG | A3a | AGRNR | DAG | MDDGA9 | MDDGC7 | MDDGC9dystroglycan 13p21CV:PGCnp
DMG:Jaffe_2016
4134MAP4-microtubule associated protein 43p21CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10425ARIH2ARI2 | TRIAD1ariadne RBR E3 ubiquitin protein ligase 23p21CV:PGCnp
Network
1294COL7A1EBD1 | EBDCT | EBR1 | NDNC8collagen type VII alpha 13p21.1CV:PGCnp
55802DCP1AHSA275986 | Nbla00360 | SMAD4IP1 | SMIFdecapping mRNA 1A3p21.1CV:PGCnp
DMG:Jaffe_2016
Network
3700ITIH4GP120 | H4P | IHRP | ITI-HC4 | ITIHL1 | PK-120 | PK120inter-alpha-trypsin inhibitor heavy chain family member 43p21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
LK:YES
PMID:cooccur
7375USP4UNP | Unphubiquitin specific peptidase 4 (proto-oncogene)3p21.3CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
Ascano FMRP targets
10180RBM63G2 | DEF-3 | DEF3 | HLC-11 | NY-LU-12 | g16RNA binding motif protein 63p21.3CV:PGCnp
7866IFRD2IFNRP | SKMc15 | SM15interferon-related developmental regulator 23p21.3CV:PGCnp
DMG:Wockner_2014
7869SEMA3BLUCA-1 | SEMA5 | SEMAA | SemA | semaVsemaphorin 3B3p21.3DMG:Wockner_2014
GO_Annotation
10217CTDSPLC3orf8 | HYA22 | PSR1 | RBSP3 | SCP3CTD small phosphatase like3p21.3CV:PGCnp
GSMA_I
8994LIMD1-LIM domains containing 13p21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
51161C3orf18G20chromosome 3 open reading frame 183p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5576PRKAR2APKR2 | PRKAR2protein kinase cAMP-dependent type II regulatory subunit alpha3p21.3-p21.2CV:PGCnp
DMG:Wockner_2014
Network
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
11277TREX1AGS1 | CRV | DRN3 | HERNSthree prime repair exonuclease 13p21.31DMG:Wockner_2014
5859QARSGLNRS | MSCCA | PRO2195glutaminyl-tRNA synthetase3p21.31CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
51368TEX264ZSIG11testis expressed 2643p21.31CV:PGCnp
10869USP19ZMYND9ubiquitin specific peptidase 193p21.31CV:PGCnpAscano FMRP targets
11180WDR6-WD repeat domain 63p21.31CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
79443FYCO1CATC2 | CTRCT18 | RUFY3 | ZFYVE7FYVE and coiled-coil domain containing 13p21.31CV:PGCnp
DMG:Wockner_2014
Expression
9497SLC4A7NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6solute carrier family 4 member 73p22CV:PGCnp
GO_Annotation
GSMA_I
5745PTH1RPFE | PTHR | PTHR1parathyroid hormone 1 receptor3p22-p21.1CV:PGCnp
DMG:Wockner_2014
Network
2803GOLGA4CRPF46 | GCP2 | GOLG | MU-RMS-40.18 | p230golgin A43p22-p21.3CV:PGCnp
GSMA_I
9209LRRFIP2HUFI-2leucine rich repeat (in FLII) interacting protein 23p22.2CV:PGCnp
GSMA_I
8850KAT2BCAF | P/CAF | PCAFlysine acetyltransferase 2B3p24CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
27303RBMS3-RNA binding motif, single stranded interacting protein 33p24-p23CV:GWASdb
CV:PGCnp
GSMA_I
5915RARBHAP | MCOPS12 | NR1B2 | RRB2retinoic acid receptor beta3p24.2CV:GWASdb
CV:PGCnp
GSMA_I
9779TBC1D5-TBC1 domain family member 53p24.3CV:GWASdb
CV:PGCnp
GSMA_I
9686VGLL4VGL-4vestigial like family member 43p25.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
PMID:cooccur
7862BRPF1BR140bromodomain and PHD finger containing 13p26-p25CV:PGCnp
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
131566DCBLD2CLCP1 | ESDNdiscoidin, CUB and LCCL domain containing 23q12.1|3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
868CBLBCbl-b | Nbla00127 | RNF56Cbl proto-oncogene B, E3 ubiquitin protein ligase3q13.11CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
64422ATG3APG3 | APG3-LIKE | APG3L | PC3-96autophagy related 33q13.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
26137ZBTB20DPZF | HOF | ODA-8S | PRIMS | ZNF288zinc finger and BTB domain containing 203q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
2932GSK3B-glycogen synthase kinase 3 beta3q13.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
942CD86B7-2 | B7.2 | B70 | CD28LG2 | LAB72CD86 molecule3q21CV:PGCnp
PMID:cooccur
3836KPNA1IPOA5 | NPI-1 | RCH2 | SRP1karyopherin subunit alpha 13q21CV:PGCnp
DMG:Wockner_2014
DNM:Girard_2011
PMID:cooccur
CompositeSet
7707ZNF148BERF-1 | BFCOL1 | HT-BETA | ZBP-89 | ZFP148 | pHZ-52zinc finger protein 1483q21CV:PGCnp
Expression
4690NCK1NCK | NCKalpha | nck-1NCK adaptor protein 13q21CV:PGCnp
GO_Annotation
Network
51421AMOTL2LCCPangiomotin like 23q21-q22CV:PGCnp
DMG:Wockner_2014
GO_Annotation
79663HSPBAP1PASS1HSPB1 associated protein 13q21.1CV:PGCnp
26984SEC22ASEC22L2SEC22 homolog A, vesicle trafficking protein3q21.1CV:PGCnp
131601TPRA1GPR175 | TMEM227 | TPRA40transmembrane protein adipocyte associated 13q21.2CV:PGCnp
3693ITGB5-integrin subunit beta 53q21.2CV:PGCnp
Network
8971H1FXH1.10 | H1XH1 histone family member X3q21.3CV:PGCnp
DMG:Nishioka_2013
7018TFHEL-S-71p | PRO1557 | PRO2086 | TFQTL1transferrin3q22.1Association
CV:PGCnp
CV:PheWAS
Network
PMID:cooccur
22808MRASM-RAs | R-RAS3 | RRAS3muscle RAS oncogene homolog3q22.3CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
10274STAG1SA1 | SCC3Astromal antigen 13q22.3CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Xu_2012
CompositeSet
25937WWTR1TAZWW domain containing transcription regulator 13q23-q24CV:PGCnp
1356CPCP-2ceruloplasmin (ferroxidase)3q23-q25CV:PGCnp
PMID:cooccur
7545ZIC1CRS6 | ZIC | ZNF201Zic family member 13q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
185AGTR1AG2S | AGTR1B | AT1 | AT1AR | AT1B | AT1BR | AT1R | AT2R1 | HAT1Rangiotensin II receptor type 13q24CV:PGCnp
DMG:Jaffe_2016
8743TNFSF10APO2L | Apo-2L | CD253 | TL2 | TNLG6A | TRAILtumor necrosis factor superfamily member 103q26CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
27333GOLIM4GIMPC | GOLPH4 | GPP130 | P138golgi integral membrane protein 43q26.2CV:PGCnp
DMG:Jaffe_2016
7095SEC62Dtrp1 | HTP1 | TLOC1 | TP-1SEC62 homolog, preprotein translocation factor3q26.2CV:PGCnp
6657SOX2ANOP3 | MCOPS3SRY-box 23q26.33Expression
PMID:cooccur
86ACTL6AACTL6 | ARPN-BETA | Arp4 | BAF53A | INO80Kactin like 6A3q26.33CV:PGCnp
DMG:Jaffe_2016
9370ADIPOQACDC | ACRP30 | ADIPQTL1 | ADPN | APM-1 | APM1 | GBP28adiponectin, C1Q and collagen domain containing3q27CV:PGCnp
PMID:cooccur
604BCL6BCL5 | BCL6A | LAZ3 | ZBTB27 | ZNF51B-cell CLL/lymphoma 63q27CV:PGCnp
DMG:Jaffe_2016
5648MASP13MC1 | CRARF | CRARF1 | MAP1 | MASP | MASP3 | MAp44 | PRSS5 | RaRFmannan binding lectin serine peptidase 13q27-q28CV:GWASdb
CV:PGCnp
GO_Annotation
8893EIF2B5CACH | CLE | EIF-2B | EIF2Bepsilon | LVWMeukaryotic translation initiation factor 2B subunit epsilon3q27.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
1608DGKGDAGK3 | DGK-GAMMAdiacylglycerol kinase gamma3q27.2-q27.3CV:GWASdb
CV:PGCnp
5437POLR2HRPABC3 | RPB17 | RPB8polymerase (RNA) II subunit H3q28DMG:Jaffe_2016
8087FXR1FXR1PFMR1 autosomal homolog 13q28CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
4026LPP-LIM domain containing preferred translocation partner in lipoma3q28CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
3280HES1HES-1 | HHL | HRY | bHLHb39hes family bHLH transcription factor 13q28-q29CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GO_Annotation
PMID:cooccur
23527ACAP2CENTB2 | CNT-B2ArfGAP with coiled-coil, ankyrin repeat and PH domains 23q29CV:PGCnp
DMG:Jaffe_2016
5062PAK2PAK65 | PAKgammap21 protein (Cdc42/Rac)-activated kinase 23q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
57205ATP10DATPVDATPase phospholipid transporting 10D (putative)4p12CV:GWASdb
CV:PGCnp
116984ARAP2CENTD1 | PARXArfGAP with RhoGAP domain, ankyrin repeat and PH domain 24p14CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
7096TLR1CD281 | TIL | TIL. LPRS5 | rsc786toll like receptor 14p14CV:PGCnp
PMID:cooccur
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
8310ACOX3-acyl-CoA oxidase 3, pristanoyl4p15.3CV:PGCnp
DMG:Nishioka_2013
64151NCAPGCAPG | CHCG | NY-MEL-3 | YCG1non-SMC condensin I complex subunit G4p15.33CV:PGCnpAscano FMRP targets
2580GAKDNAJ26 | DNAJC26cyclin G associated kinase4p16CV:PGCnpAscano FMRP targets
1487CTBP1BARSC-terminal binding protein 14p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
PROTEIN CLUSTERING
CompositeSet
Darnell FMRP targets
56606SLC2A9GLUT9 | GLUTX | UAQTL2 | URATv1solute carrier family 2 member 94p16.1CV:GWASdb
CV:PGCnp
PMID:cooccur
7466WFS1CTRCT41 | WFRS | WFS | WFSLwolframin ER transmembrane glycoprotein4p16.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
4487MSX1ECTD3 | HOX7 | HYD1 | STHAG1msh homeobox 14p16.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
10608MXD4MAD4 | MST149 | MSTP149 | bHLHc12MAX dimerization protein 44p16.3CV:PGCnp
2261FGFR3ACH | CD333 | CEK2 | HSFGFR3EX | JTK4fibroblast growth factor receptor 34p16.3CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
6452SH3BP23BP-2 | 3BP2 | CRBM | CRPM | RES4-23SH3-domain binding protein 24p16.3CV:PGCnp
DMG:Wockner_2014
8602NOP14C4orf9 | NOL14 | RES4-25 | RES425 | UTP2NOP14 nucleolar protein4p16.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Ascano FMRP targets
8603FAM193AC4orf8 | RES4-22family with sequence similarity 193 member A4p16.3CV:PGCnp
DMG:Wockner_2014
6002RGS12-regulator of G-protein signaling 124p16.3CV:PGCnp
DMG:Wockner_2014
DNM:Guipponi_2014
DNM:Xu_2012
Network
PMID:cooccur
CompositeSet
173AFMALB2 | ALBA | ALFafamin4q13.3CV:PGCnp
PMID:cooccur
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
4299AFF1AF4 | MLLT2 | PBM1AF4/FMR2 family member 14q21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
8671SLC4A4HNBC1 | KNBC | NBC1 | NBC2 | NBCe1-A | SLC4A5 | hhNMC | kNBC1 | pNBCsolute carrier family 4 member 44q21CV:GWASdb
CV:PGCnp
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10983CCNICCNI1 | CYC1 | CYIcyclin I4q21.1CV:PGCnp
DMG:Wockner_2014
10098TSPAN5NET-4 | NET4 | TM4SF9 | TSPAN-5tetraspanin 54q23CV:PGCnp
DMG:Jaffe_2016
125ADH1BADH2 | HEL-S-117alcohol dehydrogenase 1B (class I), beta polypeptide4q23Association
CV:PGCnp
PMID:cooccur
4790NFKB1CVID12 | EBP-1 | KBF1 | NF-kB1 | NF-kappa-B | NF-kappaB | NFKB-p105 | NFKB-p50 | NFkappaB | p105 | p50nuclear factor of kappa light polypeptide gene enhancer in B-cells 14q24CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1950EGFHOMG4 | URGepidermal growth factor4q25Association
CV:PGCnp
GR_Ng
GR_WM
Network
PMID:cooccur
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
839CASP6MCH2caspase 64q25CV:PGCnp
Network
Ascano FMRP targets
51176LEF1LEF-1 | TCF10 | TCF1ALPHA | TCF7L3lymphoid enhancer binding factor 14q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
1998ELF2EU32 | NERF | NERF-1A | NERF-1B | NERF-1a,b | NERF-2E74 like ETS transcription factor 24q28CV:PGCnp
4086SMAD1BSP-1 | BSP1 | JV4-1 | JV41 | MADH1 | MADR1SMAD family member 14q31CV:PGCnp
GO_Annotation
23022PALLDCGI-151 | CGI151 | MYN | PNCA1 | SIH002palladin, cytoskeletal associated protein4q32.3CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
4750NEK1NY-REN-55 | SRPS2 | SRPS2A | SRTD6NIMA related kinase 14q33CV:GWASdb
CV:PGCnp
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
8001GLRA3-glycine receptor alpha 34q34.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
8819SAP30-Sin3A associated protein 30kDa4q34.1CV:PGCnp
DEG:Maycox_2009
730C7-complement component 75p13CV:PGCnp
PMID:cooccur
3977LIFRCD118 | LIF-R | SJS2 | STWS | SWSleukemia inhibitory factor receptor alpha5p13-p12PMID:cooccur
25836NIPBLCDLS | CDLS1 | IDN3 | IDN3-B | Scc2Nipped-B homolog (Drosophila)5p13.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
5618PRLRHPRL | MFAB | hPRLrIprolactin receptor5p13.2CV:PGCnp
PMID:cooccur
10723SLC12A7KCC4solute carrier family 12 member 75p15CV:PGCnp
DMG:Wockner_2014
4651MYO10-myosin X5p15.1CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
108ADCY2AC2 | HBAC2adenylate cyclase 2 (brain)5p15.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
5144PDE4DACRDYS2 | DPDE3 | HSPDE4D | PDE43 | PDE4DN2 | STRK1phosphodiesterase 4D5q12CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
23743BHMT2-betaine--homocysteine S-methyltransferase 25q13CV:PGCnp
1393CRHBPCRF-BP | CRFBPcorticotropin releasing hormone binding protein5q13.3CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
51752ERAP1A-LAP | ALAP | APPILS | ARTS-1 | ARTS1 | ERAAP | ERAAP1 | PILS-AP | PILSAPendoplasmic reticulum aminopeptidase 15q15CV:PGCnp
DMG:Jaffe_2016
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
1105CHD1-chromodomain helicase DNA binding protein 15q15-q21CV:PGCnp
DMG:Jaffe_2016
1839HBEGFDTR | DTS | DTSF | HEGFLheparin binding EGF like growth factor5q23CV:PGCnp
GSMA_I
25816TNFAIP8GG2-1 | MDC-3.13 | NDED | SCC-S2 | SCCS2TNF alpha induced protein 85q23.1CV:PGCnp
DMG:Wockner_2014
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
4090SMAD5DWFC | JV5-1 | MADH5SMAD family member 55q31CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
2246FGF1AFGF | ECGF | ECGF-beta | ECGFA | ECGFB | FGF-1 | FGF-alpha | FGFA | GLIO703 | HBGF-1 | HBGF1fibroblast growth factor 15q31Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
NEUROTROPHIN SIGNALING
6414SEPP1SELP | SEPP | SePselenoprotein P, plasma, 15q31CV:PGCnp
GO_Annotation
PMID:cooccur
23092ARHGAP26GRAF | GRAF1 | OPHN1L | OPHN1L1Rho GTPase activating protein 265q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
9499MYOTLGMD1 | LGMD1A | MFM3 | TTID | TTODmyotilin5q31CV:PGCnp
GSMA_I
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6932TCF7TCF-1transcription factor 7 (T-cell specific, HMG-box)5q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
1495CTNNA1CAP102catenin alpha 15q31.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
1452CSNK1A1CK1 | CK1a | CKIa | HEL-S-77p | HLCDGP1 | PRO2975casein kinase 1 alpha 15q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1809DPYSL3CRMP-4 | CRMP4 | DRP-3 | DRP3 | LCRMP | ULIP | ULIP-1dihydropyrimidinase like 35q32CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
1836SLC26A2D5S1708 | DTD | DTDST | EDM4 | MST153 | MSTP157solute carrier family 26 member 25q32CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
10318TNIP1ABIN-1 | NAF1 | VAN | nip40-1TNFAIP3 interacting protein 15q33.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
5159PDGFRBCD140B | IBGC4 | IMF1 | JTK12 | KOGS | PDGFR | PDGFR-1 | PDGFR1 | PENTTplatelet derived growth factor receptor beta5q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
2878GPX3GPx-P | GSHPx-3 | GSHPx-Pglutathione peroxidase 35q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
8817FGF18FGF-18 | ZFGF5fibroblast growth factor 185q34Association
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
9945GFPT2GFAT | GFAT 2 | GFAT2glutamine-fructose-6-phosphate transaminase 25q34-q35CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
2870GRK6GPRK6G protein-coupled receptor kinase 65q35CV:PGCnp
GSMA_IIA
PMID:cooccur
4245MGAT1GLCNAC-TI | GLCT1 | GLYT1 | GNT-1 | GNT-I | MGATmannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase5q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
Ascano FMRP targets
6793STK10LOK | PRO2729serine/threonine kinase 105q35.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
8992ATP6V0E1ATP6H | ATP6V0E | M9.2 | Vma21 | Vma21pATPase H+ transporting V0 subunit e15q35.1CV:PGCnp
GSMA_IIA
55819RNF130G1RZFP | GOLIATH | GPring finger protein 1305q35.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
80230RUFY1RABIP4 | ZFYVE12RUN and FYVE domain containing 15q35.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
Ascano FMRP targets
2729GCLCGCL | GCS | GLCL | GLCLCglutamate-cysteine ligase catalytic subunit6p12CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
55227LRRC1LANO | dJ523E19.1leucine rich repeat containing 16p12.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GSMA_IIE
51302CYP39A1-cytochrome P450 family 39 subfamily A member 16p12.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
81578COL21A1COLA1L | FP633collagen type XXI alpha 16p12.3-p11.2|6p12.3-p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
988CDC5LCDC5 | CDC5-LIKE | CEF1 | PCDC5RP | dJ319D22.1cell division cycle 5 like6p21CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Network
860RUNX2AML3 | CBF-alpha-1 | CBFA1 | CCD | CCD1 | CLCD | OSF-2 | OSF2 | PEA2aA | PEBP2aArunt related transcription factor 26p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
896CCND3-cyclin D36p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
Network
7942TFEBALPHATFEB | BHLHE35 | TCFEBtranscription factor EB6p21CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
5429POLHRAD30 | RAD30A | XP-V | XPVpolymerase (DNA) eta6p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
89845ABCC10EST182763 | MRP7 | SIMRP7ATP binding cassette subfamily C member 106p21.1CV:PGCnp
GSMA_IIE
10695CNPY3CAG4A | ERDA5 | PRAT4A | TNRC5canopy FGF signaling regulator 36p21.1DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
9533POLR1CAC40 | HLD11 | RPA39 | RPA40 | RPA5 | RPAC1 | RPC40 | TCS3polymerase (RNA) I subunit C6p21.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
5225PGCPEPC | PGIIprogastricsin (pepsinogen C)6p21.1CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
93643TJAP1PILT | TJP4tight junction associated protein 16p21.1CV:PGCnp
GO_Annotation
GSMA_IIE
5467PPARDFAAR | NR1C2 | NUC1 | NUCI | NUCII | PPARBperoxisome proliferator activated receptor delta6p21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
PMID:cooccur
60685ZFAND3TEX27zinc finger AN1-type containing 36p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
23500DAAM2dJ90A20A.1dishevelled associated activator of morphogenesis 26p21.2Association
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
PMID:cooccur
5292PIM1PIMPim-1 proto-oncogene, serine/threonine kinase6p21.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
3113HLA-DPA1DP(W3) | DP(W4) | HLA-DP1A | HLADP | HLASB | PLT1major histocompatibility complex, class II, DP alpha 16p21.3CV:PGCnp
GSMA_I
PMID:cooccur
6046BRD2D6S113E | FSH | FSRG1 | NAT | O27.1.1 | RING3 | RNF3bromodomain containing 26p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3133HLA-EEA1.2 | EA2.1 | HLA-6.2 | MHC | QA1major histocompatibility complex, class I, E6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
4855NOTCH4INT3notch 46p21.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
10384BTN3A3BTF3 | BTN3.3butyrophilin subfamily 3 member A36p21.3CV:PGCnp
GSMA_I
PMID:cooccur
54535CCHCR1C6orf18 | HCR | SBPcoiled-coil alpha-helical rod protein 16p21.3CV:PGCnp
CV:PheWAS
GSMA_I
Ascano FMRP targets
10107TRIM10HERF1 | RFB30 | RNF9tripartite motif containing 106p21.3CV:PGCnp
GSMA_I
PMID:cooccur
7726TRIM26AFP | RNF95 | ZNF173tripartite motif containing 266p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
5252PHF1MTF2L2 | PCL1 | PHF2 | TDRD19C | hPHF1PHD finger protein 16p21.3CV:PGCnp
GSMA_I
780DDR1CAK | CD167 | DDR | EDDR1 | HGK2 | MCK10 | NEP | NTRK4 | PTK3 | PTK3A | RTK6 | TRKEdiscoidin domain receptor tyrosine kinase 16p21.3Association
CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
10475TRIM38RNF15 | RORETtripartite motif containing 386p21.3CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
4277MICBPERB11.2MHC class I polypeptide-related sequence B6p21.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GR_COR
GR_WM
GSMA_I
PMID:cooccur
63940GPSM3AGS4 | C6orf9 | G18 | G18.1a | G18.1b | G18.2 | NG1G-protein signaling modulator 36p21.3CV:GWASdb
CV:PGCnp
GSMA_I
3006HIST1H1CH1.2 | H1C | H1F2 | H1s-1histone cluster 1, H1c6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6257RXRBDAUDI6 | H-2RIIBP | NR2B2 | RCoR-1retinoid X receptor beta6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3017HIST1H2BDH2B.1B | H2B/b | H2BFB | HIRIP2 | dJ221C16.6histone cluster 1, H2bd6p21.3CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
6890TAP1ABC17 | ABCB2 | APT1 | D6S114E | PSF-1 | PSF1 | RING4 | TAP1*0102N | TAP1Ntransporter 1, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
6892TAPBPNGS17 | TAPA | TPN | TPSNTAP binding protein (tapasin)6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
1192CLIC1G6 | NCC27chloride intracellular channel 16p21.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
Network
3077HFEHFE1 | HH | HLA-H | MVCD7 | TFQTL2hemochromatosis6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
5089PBX2G17 | HOX12 | PBX2MHCpre-B-cell leukemia homeobox 26p21.3CV:PGCnp
GSMA_I
6204RPS10DBA9 | S10ribosomal protein S106p21.31CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
6882TAF11MGC:15243 | PRO2134 | TAF2I | TAFII28TATA-box binding protein associated factor 116p21.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIE
8365HIST1H4HH4/h | H4FHhistone cluster 1, H4h6p22.1CV:PGCnp
GSMA_I
5617PRLGHA1prolactin6p22.3CV:PGCnp
GSMA_I
PMID:cooccur
3400ID4IDB4 | bHLHb27inhibitor of DNA binding 4, HLH protein6p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
2766GMPRGMPR 1 | GMPR1guanosine monophosphate reductase6p23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
7020TFAP2AAP-2 | AP-2alpha | AP2TF | BOFS | TFAP2transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)6p24CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
1832DSPDCWHKTA | DPdesmoplakin6p24CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
6239RREB1FINB | HNT | LZ321 | RREB-1 | Zep-1ras responsive element binding protein 16p25CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
8899PRPF4BPR4H | PRP4 | PRP4H | PRP4K | dJ1013A10.1pre-mRNA processing factor 4B6p25.2CV:PGCnp
GSMA_I
4646MYO6DFNA22 | DFNB37myosin VI6q13CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1915EEF1A1CCS-3 | CCS3 | EE1A1 | EEF-1 | EEF1A | EF-Tu | EF1A | GRAF-1EF | HNGC:16303 | LENG7 | PTI1 | eEF1A-1eukaryotic translation elongation factor 1 alpha 16q14.1CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9324HMGN3PNAS-24 | PNAS-25 | TRIP7high mobility group nucleosomal binding domain 36q14.1CV:PGCnp
DMG:Wockner_2014
5238PGM3AGM1 | IMD23 | PAGM | PGM 3phosphoglucomutase 36q14.1-q15CV:PGCnp
58528RRAGDRAGD | bA11D8.2.1Ras related GTP binding D6q15CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
60468BACH2BTBD25BTB domain and CNC homolog 26q15CV:PGCnp
8732RNGTTCAP1A | HCE | HCE1 | hCAPRNA guanylyltransferase and 5'-phosphatase6q16CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
11231SEC63DNAJC23 | ERdj2 | PRO2507 | SEC63LSEC63 homolog, protein translocation regulator6q21CV:GWAScat
CV:GWASdb
CV:PGCnp
8763CD164DFNA66 | MGC-24 | MUC-24 | endolynCD164 molecule6q21CV:PGCnp
DMG:Jaffe_2016
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
57107PDSS2C6orf210 | COQ10D3 | DLP1 | bA59I9.3 | hDLP1prenyl (decaprenyl) diphosphate synthase, subunit 26q21CV:PGCnp
2309FOXO3AF6q21 | FKHRL1 | FKHRL1P2 | FOXO2 | FOXO3Aforkhead box O36q21CV:PGCnp
DMG:Wockner_2014
Network
CompositeSet
Darnell FMRP targets
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
29940DSEDSEP | DSEPI | EDSMC2 | SART-2 | SART2dermatan sulfate epimerase6q22CV:PGCnp
PMID:cooccur
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
7164TPD52L1D53tumor protein D52-like 16q22-q23CV:PGCnp
DMG:Wockner_2014
5796PTPRKR-PTP-kappaprotein tyrosine phosphatase, receptor type K6q22.2-q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2697GJA1AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCAgap junction protein alpha 16q22.31CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
7128TNFAIP3A20 | AISBL | OTUD7C | TNFA1P2TNF alpha induced protein 36q23CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9053MAP7E-MAP-115 | EMAP115microtubule associated protein 76q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5325PLAGL1LOT1 | ZAC | ZAC1PLAG1 like zinc finger 16q24-q25CV:PGCnp
DMG:Wockner_2014
10090UST2OSTuronyl 2-sulfotransferase6q25.1CV:GWASdb
CV:PGCnp
348995NUP43bA350J20.1 | p42nucleoporin 43kDa6q25.1CV:PGCnp
6648SOD2IPOB | MNSOD | MVCD6superoxide dismutase 2, mitochondrial6q25.3Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
55274PHF10BAF45A | XAP135PHD finger protein 106q27CV:PGCnp
DMG:Wockner_2014
1956EGFRERBB | ERBB1 | HER1 | NISBD2 | PIG61 | mENAepidermal growth factor receptor7p12Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
2887GRB10GRB-IR | Grb-10 | IRBP | MEG1 | RSSgrowth factor receptor bound protein 107p12.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
8621CDK13CDC2L | CDC2L5 | CHED | hCDK13cyclin-dependent kinase 137p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
358AQP1AQP-CHIP | CHIP28 | COaquaporin 1 (Colton blood group)7p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
4967OGDHAKGDH | E1k | OGDCoxoglutarate dehydrogenase7p14-p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6424SFRP4FRP-4 | FRPHE | sFRP-4secreted frizzled-related protein 47p14.1CV:PGCnp
DMG:Wockner_2014
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
5898RALARALv-ral simian leukemia viral oncogene homolog A (ras related)7p15-p13CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
3569IL6BSF-2 | BSF2 | CDF | HGF | HSF | IFN-beta-2 | IFNB2 | IL-6interleukin 67p21CV:GWASdb
CV:PGCnp
PMID:cooccur
5879RAC1MIG5 | Rac-1 | TC-25 | p21-Rac1ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)7p22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
7559ZNF12GIOT-3 | HZF11 | KOX3 | ZNF325zinc finger protein 127p22.1CV:PGCnp
Expression
54476RNF216CAHH | TRIAD3 | U7I1 | UBCE7IP1 | ZINring finger protein 2167p22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
26100WIPI2ATG18B | Atg21 | CGI-50 | WIPI-2WD repeat domain, phosphoinositide interacting 27p22.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
2768GNA12NNX3 | RMP | gepG protein subunit alpha 127p22.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G-PROTEIN RELAY
Ascano FMRP targets
8662EIF3BEIF3-ETA | EIF3-P110 | EIF3-P116 | EIF3S9 | PRT1eukaryotic translation initiation factor 3 subunit B7p22.3CV:PGCnp
DNM:Guipponi_2014
Ascano FMRP targets
2969GTF2IBAP135 | BTKAP1 | DIWS | GTFII-I | IB291 | SPIN | TFII-I | WBS | WBSCR6general transcription factor IIi7q11.23CV:PGCnp
Network
PMID:cooccur
7461CLIP2CLIP | CLIP-115 | CYLN2 | WBSCR3 | WBSCR4 | WSCR3 | WSCR4CAP-Gly domain containing linker protein 27q11.23CNV:YES
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
7462LAT2HSPC046 | LAB | NTAL | WBSCR15 | WBSCR5 | WSCR5linker for activation of T-cells family member 27q11.23CNV:YES
CV:PGCnp
GO_Annotation
51593SRRTARS2 | ASR2 | serrateserrate, RNA effector molecule7q21CV:PGCnp
PMID:cooccur
Ascano FMRP targets
10142AKAP9AKAP-9 | AKAP350 | AKAP450 | CG-NAP | HYPERION | LQT11 | MU-RMS-40.16A | PPP1R45 | PRKA9 | YOTIAOA-kinase anchoring protein 97q21-q22CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10512SEMA3CSEMAE | SemEsemaphorin 3C7q21-q31CV:PGCnp
DMG:Wockner_2014
1576CYP3A4CP33 | CP34 | CYP3A | CYP3A3 | CYPIIIA3 | CYPIIIA4 | HLP | NF-25 | P450C3 | P450PCN1cytochrome P450 family 3 subfamily A member 47q21.1ADT:Sun_2012
CV:PGCnp
PMID:cooccur
3082HGFDFNB39 | F-TCF | HGFB | HPTA | SFhepatocyte growth factor7q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
2990GUSBBG | MPS7glucuronidase beta7q21.11CV:PGCnp
PMID:cooccur
55972SLC25A40MCFPsolute carrier family 25 member 407q21.12CV:PGCnp
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
55607PPP1R9ANRB1 | NRBI | Neurabin-Iprotein phosphatase 1 regulatory subunit 9A7q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
56996SLC12A9CCC6 | CIP1 | WO3.3 | hCCC6solute carrier family 12 member 97q22CV:PGCnp
4034LRCH4LRN | LRRN1 | LRRN4 | PP14183leucine-rich repeats and calponin homology (CH) domain containing 47q22CV:PGCnp
DEG:Maycox_2009
GO_Annotation
6733SRPK2SFRSK2SRSF protein kinase 27q22-q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
29992PILRAFDF03paired immunoglobin-like type 2 receptor alpha7q22.1CV:PGCnp
DMG:vanEijk_2014
1523CUX1CASP | CDP | CDP/Cut | CDP1 | COY1 | CUTL1 | CUX | Clox | Cux/CDP | GOLIM6 | Nbla10317 | p100 | p110 | p200 | p75cut like homeobox 17q22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10135NAMPT1110035O14Rik | PBEF | PBEF1 | VF | VISFATINnicotinamide phosphoribosyltransferase7q22.3CV:GWASdb
CV:PGCnp
26959HBP1-HMG-box transcription factor 17q22.3CV:PGCnp
PMID:cooccur
54556ING3Eaf4 | ING2 | MEAF4 | p47ING3inhibitor of growth family member 37q31CV:PGCnp
50833TAS2R16T2R16taste 2 receptor member 167q31.1-q31.3|7q31CV:GWASdb
CV:PGCnp
22797TFECTCFEC | TFE-C | TFEC-L | TFECL | bHLHe34 | hTFEC-Ltranscription factor EC7q31.2CV:PGCnp
26136TESTESS | TESS-2testin LIM domain protein7q31.2CV:PGCnp
PMID:cooccur
6561SLC13A1NAS1 | NaSi-1solute carrier family 13 member 17q31.32CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
CompositeSet
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
51631LUC7L2CGI-59 | CGI-74 | LUC7B2LUC7-like 2 pre-mRNA splicing factor7q34CV:PGCnp
Network
6742SSBP1Mt-SSB | SOSS-B1 | SSBP | mtSSBsingle-stranded DNA binding protein 1, mitochondrial7q34DMG:Nishioka_2013
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
23608MKRN1RNF61makorin ring finger protein 17q34CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
28996HIPK2PRO0593homeodomain interacting protein kinase 27q34CV:PGCnpCompositeSet
Darnell FMRP targets
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
7994KAT6AMOZ | MRD32 | MYST-3 | MYST3 | RUNXBP2 | ZC2HC6A | ZNF220lysine acetyltransferase 6A8p11CV:PGCnp
DMG:Jaffe_2016
1052CEBPDC/EBP-delta | CELF | CRP3 | NF-IL6-betaCCAAT/enhancer binding protein delta8p11.2-p11.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
8973CHRNA6CHNRA6cholinergic receptor nicotinic alpha 6 subunit8p11.21CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
6867TACC1Ga55transforming acidic coiled-coil containing protein 18p11.22CV:PGCnp
DMG:Wockner_2014
2260FGFR1BFGFR | CD331 | CEK | FGFBR | FGFR-1 | FLG | FLT-2 | FLT2 | HBGFR | HH2 | HRTFDS | KAL2 | N-SAM | OGD | bFGF-R-1fibroblast growth factor receptor 18p11.23-p11.22Association
CV:PGCnp
Network
PMID:cooccur
11030RBPMSHERMESRNA binding protein with multiple splicing8p12CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
Network
7486WRNRECQ3 | RECQL2 | RECQL3Werner syndrome RecQ like helicase8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
23303KIF13BGAKINkinesin family member 13B8p12CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Ascano FMRP targets
1191CLUAAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2clusterin8p21-p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
27299ADAMDEC1M12.219ADAM-like, decysin 18p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
64236PDLIM2MYSTIQUE | SLIMPDZ and LIM domain 28p21.3GSMA_I
GSMA_IIA
GSMA_IIE
57509MTUS1ATBP | ATIP | ICIS | MP44 | MTSG1microtubule associated tumor suppressor 18p22CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
427ASAH1AC | ACDase | ASAH | PHP | PHP32 | SMAPMEN-acylsphingosine amidohydrolase (acid ceramidase) 18p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4023LPLHDLCQ11 | LIPDlipoprotein lipase8p22CV:GWASdb
CV:PGCnp
CV:PheWAS
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1508CTSBAPPS | CPSBcathepsin B8p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
5108PCM1PTC4 | RET/PCM-1pericentriolar material 18p22-p21.3Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
1669DEFA4DEF4 | HNP-4 | HP-4 | HP4defensin alpha 48p23CV:PGCnp
PMID:cooccur
9639ARHGEF10GEF10 | SNCVRho guanine nucleotide exchange factor 108p23Association
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
2222FDFT1DGPT | ERG9 | SQS | SSfarnesyl-diphosphate farnesyltransferase 18p23.1-p22CV:PGCnp
DMG:Jaffe_2016
6591SNAI2SLUG | SLUGH1 | SNAIL2 | WS2Dsnail family zinc finger 28q11CV:PGCnp
PMID:cooccur
9705ST18NZF3 | ZC2HC10 | ZNF387suppression of tumorigenicity 18, zinc finger8q11.23CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
2669GEMKIRGTP binding protein overexpressed in skeletal muscle8q13-q21CV:PGCnp
PMID:cooccur
23471TRAM1PNAS8 | TRAM | TRAMPtranslocation associated membrane protein 18q13.3CV:PGCnp
DMG:Wockner_2014
734OSGIN2C8orf1 | hT41oxidative stress induced growth inhibitor family member 28q21CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
79776ZFHX4ZFH4 | ZHF4zinc finger homeobox 48q21.11CV:PGCnp
64089SNX16-sorting nexin 168q21.13CV:GWASdb
CV:PGCnp
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
8895CPNE3CPN3 | PRO1071copine 38q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
4325MMP16C8orf57 | MMP-X2 | MT-MMP2 | MT-MMP3 | MT3-MMPmatrix metallopeptidase 168q21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
LK:YES
PMID:cooccur
25897RNF19ARNF19ring finger protein 19A, RBR E3 ubiquitin protein ligase8q22CV:PGCnp
CV:PheWAS
26986PABPC1PAB1 | PABP | PABP1 | PABPC2 | PABPL1poly(A) binding protein, cytoplasmic 18q22.2-q23CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9699RIMS2OBOE | RAB3IP3 | RIM2regulating synaptic membrane exocytosis 28q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
284ANGPT1AGP1 | AGPT | ANG1angiopoietin 18q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
7553ZNF7HF.16 | KOX4 | zf30zinc finger protein 78q24CV:PGCnp
DMG:Wockner_2014
4982TNFRSF11BOCIF | OPG | PDB5 | TR1tumor necrosis factor receptor superfamily member 11b8q24CV:PGCnp
CV:PheWAS
5339PLECEBS1 | EBSMD | EBSND | EBSO | EBSOG | EBSPA | HD1 | LGMD2Q | PCN | PLEC1 | PLEC1b | PLTNplectin8q24CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7227TRPS1GC79 | LGCRtranscriptional repressor GATA binding 18q24.12CV:PGCnp
29894CPSF1CPSF160 | HSU37012 | P/cl.18cleavage and polyadenylation specific factor 18q24.23CV:PGCnpAscano FMRP targets
50626CYHR1CHRPcysteine/histidine-rich 18q24.3CV:PGCnp
DMG:Wockner_2014
1936EEF1DEF-1D | EF1D | FP1047eukaryotic translation elongation factor 1 delta8q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
23513SCRIBCRIB1 | SCRB1 | SCRIB1 | Vartulscribbled planar cell polarity protein8q24.3CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
Ascano FMRP targets
8629JRKJH8 | jerkyJrk helix-turn-helix protein8q24.3CV:PGCnp
573BAG1BAG-1 | HAP | RAP46BCL2 associated athanogene 19p12CV:PGCnp
Expression
PMID:cooccur
4799NFX1NFX2 | TEG-42 | Tex42nuclear transcription factor, X-box binding 19p13.3CV:PGCnp
10488CREB3LUMAN | LZIP | sLZIPcAMP responsive element binding protein 39p13.3DMG:Nishioka_2013
55833UBAP2UBAP-2ubiquitin associated protein 29p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
54840APTXAOA | AOA1 | AXA1 | EAOH | EOAHA | FHA-HITaprataxin9p13.3CV:PGCnp
10210TOPORSLUN | P53BP3 | RP31 | TP53BPLtopoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase9p21CV:PGCnp
DMG:Wockner_2014
80173IFT74CCDC2 | CMG-1 | CMG1intraflagellar transport 749p21.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3442IFNA5IFN-alpha-5 | IFN-alphaG | INA5 | INFA5 | leIF Ginterferon, alpha 59p22CV:PGCnp
3449IFNA16IFN-alpha-16 | IFN-alphaOinterferon, alpha 169p22CV:PGCnp
4781NFIBCTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3nuclear factor I/B9p24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
9414TJP2C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2tight junction protein 29q13-q21CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
9413FAM189A2C9orf61 | X123family with sequence similarity 189 member A29q21.11CV:PGCnp
DNM:Guipponi_2014
301ANXA1ANX1 | LPC1annexin A19q21.13CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
5125PCSK5PC5 | PC6 | PC6A | SPC6proprotein convertase subtilisin/kexin type 59q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
2619GAS1-growth arrest specific 19q21.3-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
8013NR4A3CHN | CSMF | MINOR | NOR1 | TECnuclear receptor subfamily 4 group A member 39q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
84909C9orf3AOPEP | AP-O | APO | C90RF3 | ONPEPchromosome 9 open reading frame 39q22.32CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9830TRIM14-tripartite motif containing 149q22.33CV:PGCnp
DMG:Wockner_2014
55357TBC1D2PARIS-1 | PARIS1 | TBC1D2ATBC1 domain family member 29q22.33CV:PGCnp
PMID:cooccur
7357UGCGGCS | GLCT1UDP-glucose ceramide glucosyltransferase9q31CV:PGCnp
19ABCA1ABC-1 | ABC1 | CERP | HDLDT1 | TGDATP binding cassette subfamily A member 19q31.1CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
23071ERP44PDIA10 | TXNDC4endoplasmic reticulum protein 449q31.1CV:PGCnp
25861DFNB31CIP98 | PDZD7B | USH2D | WHRN | WIdeafness, autosomal recessive 319q32CV:GWASdb
CV:PGCnp
GO_Annotation
5742PTGS1COX1 | COX3 | PCOX1 | PES-1 | PGG/HS | PGHS-1 | PGHS1 | PHS1 | PTGHSprostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)9q32-q33.3CV:PGCnp
PMID:cooccur
727C5C5D | C5a | C5b | CPAMD4 | ECLZBcomplement component 59q33-q34CV:PGCnp
GO_Annotation
PMID:cooccur
9649RALGPS1RALGEF2 | RALGPS1ARal GEF with PH domain and SH3 binding motif 19q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8019BRD3ORFX | RING3Lbromodomain containing 39q34CV:PGCnp
DMG:Wockner_2014
20ABCA2ABC2ATP binding cassette subfamily A member 29q34DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
5524PPP2R4PP2A | PR53 | PTPAprotein phosphatase 2A regulatory subunit 49q34CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
8021NUP214CAIN | CANnucleoporin 214kDa9q34.1CV:PGCnp
DMG:Nishioka_2013
DNM:Gulsuner_2013
25ABL1ABL | JTK7 | bcr/abl | c-ABL | c-ABL1 | p150 | v-ablABL proto-oncogene 1, non-receptor tyrosine kinase9q34.1CV:PGCnp
Network
Ascano FMRP targets
25792CIZ1LSFR1 | NP94 | ZNF356CDKN1A interacting zinc finger protein 19q34.1CV:PGCnp
DMG:Wockner_2014
2040STOMBND7 | EPB7 | EPB72stomatin9q34.1CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
79095C9orf16EST00098chromosome 9 open reading frame 169q34.1CV:PGCnp
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6837MED22MED24 | SURF5 | surf-5mediator complex subunit 229q34.2CV:PGCnp
5900RALGDSRGDS | RGF | RalGEFral guanine nucleotide dissociation stimulator9q34.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Guipponi_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
2002ELK1-ELK1, ETS transcription factorXp11.2DEG:Sanders_2013
Expression
PMID:cooccur
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
8241RBM10DXS8237E | GPATC9 | GPATCH9 | S1-1 | TARPS | ZRANB5RNA binding motif protein 10Xp11.23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
9104RGNGNL | HEL-S-41 | RC | SMP30regucalcinXp11.3CV:PGCnp
PMID:cooccur
6102RP2DELXp11.3 | NM23-H10 | NME10 | TBCCD2 | XRP2retinitis pigmentosa 2 (X-linked recessive)Xp11.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
8573CASKCAGH39 | CAMGUK | CMG | FGS4 | LIN2 | MICPCH | MRXSNA | TNRC8calcium/calmodulin-dependent serine protein kinase (MAGUK family)Xp11.4CV:PGCnp
Expression
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
Potential synaptic genes
1756DMDBMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85dystrophinXp21.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
5277PIGAGPI3 | MCAHS2 | PIG-A | PNH1phosphatidylinositol glycan anchor biosynthesis class AXp22.1DMG:vanEijk_2014
11141IL1RAPL1IL1R8 | IL1RAPL | MRX10 | MRX21 | MRX34 | OPHN4 | TIGIRR-2interleukin 1 receptor accessory protein like 1Xp22.1-p21.3CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2824GPM6BM6Bglycoprotein M6BXp22.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Potential synaptic genes
55841WWC3BM042WWC family member 3Xp22.32CV:GWASdb
CV:PGCnp
4983OPHN1ARHGAP41 | MRX60 | OPN1oligophrenin 1Xq12CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
538ATP7ADSMAX | MK | MNK | SMAX3ATPase copper transporting alphaXq21.1CV:PGCnp
GO_Annotation
PMID:cooccur
7105TSPAN6T245 | TM4SF6 | TSPAN-6tetraspanin 6Xq22CV:PGCnp
680BRS3BB3bombesin like receptor 3Xq26.3CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
2539G6PDG6PD1glucose-6-phosphate dehydrogenaseXq28CV:PGCnp
PMID:cooccur
6134RPL10AUTSX5 | DXS648 | DXS648E | L10 | NOV | QMribosomal protein L10Xq28CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3654IRAK1IRAK | pelleinterleukin 1 receptor associated kinase 1Xq28CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes
55879GABRQTHETAgamma-aminobutyric acid type A receptor theta subunitXq28CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
83259PCDH11YPCDH-PC | PCDH22 | PCDHX | PCDHYprotocadherin 11 Y-linkedYp11.2PMID:cooccur