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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: TRIM10

Summary

GeneID

10107

Symbol

TRIM10

Synonyms

HERF1|MGC141979|RFB30|RNF9

Description

tripartite motif-containing 10

Locus tag

DAAP-200B17.4

Gene type

protein-coding

Map location

6p21.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.033

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

CREB3L1

0.69

0.73

SUOX

0.69

0.65

ADCY2

0.68

0.70

CCDC3

0.68

0.72

CCKBR

0.66

0.69

SERPINE2

0.65

0.67

ETV5

0.65

0.71

OLFML2B

0.64

0.70

CHRM1

0.64

0.68

ZDHHC8

0.64

Top 10 negatively co-expressed genes

C21orf57

-0.46

-0.45

FAM159B

-0.45

-0.50

EIF5B

-0.41

-0.39

RP9P

-0.38

-0.39

AL050337.1

-0.38

-0.28

AC011475.1

-0.38

-0.35

CWF19L2

-0.38

-0.33

AC098691.2

-0.38

-0.27

RBMX2

-0.36

-0.34

NSBP1

-0.36

-0.32

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IEA

GO:0008270

zinc ion binding

IEA

GO:0008270

zinc ion binding

NAS

GO:0046872

metal ion binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0030097

hemopoiesis

NAS

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005622

intracellular

IEA

GO:0005622

intracellular

NAS

GO:0005737

cytoplasm

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
TRIM10	HERF1 \| MGC141979 \| RFB30 \| RNF9	tripartite motif-containing 10	-	HPRD,BioGRID	11331580

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-7	104	110	1A	hsa-miR-7^SZ	UGGAAGACUAGUGAUUUUGUUG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.