Search results: The pahtway p4230 has 718 genes in the original annotation. Currently, there are 401 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
9317PTERHPHRP | RPR-1phosphotriesterase related10p12CV:PGCnp
PMID:cooccur
221078NSUN64933414E04Rik | ARL5B-AS1 | NOPD1NOP2/Sun RNA methyltransferase family member 610p12.31CV:PGCnp
DMG:Jaffe_2016
LK:YES
219681ARMC3CT81 | KU-CT-1armadillo repeat containing 310p12.31CV:PGCnp
DMG:Wockner_2014
64421DCLRE1CA-SCID | DCLREC1C | RS-SCID | SCIDA | SNM1CDNA cross-link repair 1C10p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5092PCBD1DCOH | PCBD | PCD | PHSpterin-4 alpha-carbinolamine dehydratase 110q22CV:PGCnp
84647PLA2G12BFKSG71 | GXIIB | GXIIIsPLA2 | PLA2G13 | sPLA2-GXIIBphospholipase A2 group XIIB10q22.1DNM:Xu_2012CompositeSet
3988LIPACESD | LALlipase A, lysosomal acid type10q23.2-q23.3CV:GWASdb
CV:PGCnp
3433IFIT2G10P2 | GARG-39 | IFI-54 | IFI-54K | IFI54 | IFIT-2 | ISG-54 K | ISG-54K | ISG54 | P54 | cig42interferon induced protein with tetratricopeptide repeats 210q23.31CV:PGCnp
PMID:cooccur
53354PANK1PANKpantothenate kinase 110q23.31CV:PGCnp
953ENTPD1ATPDase | CD39 | NTPDase-1 | SPG64ectonucleoside triphosphate diphosphohydrolase 110q24CV:PGCnp
DMG:vanEijk_2014
84795PYROXD2C10orf33 | FP3420pyridine nucleotide-disulphide oxidoreductase domain 210q24.2CV:PGCnp
51063CALHM2FAM26Bcalcium homeostasis modulator 210q24.33CV:PGCnp
LK:YES
51703ACSL5ACS2 | ACS5 | FACL5acyl-CoA synthetase long-chain family member 510q25.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
79096C11orf49-chromosome 11 open reading frame 4911p11.2CV:PGCnp
3739KCNA4HBK4 | HK1 | HPCN2 | HUKII | KCNA4L | KCNA8 | KV1.4 | PCN2potassium voltage-gated channel subfamily A member 411p14CV:PGCnpEXCITABILITY
196074METTL15METT5D1methyltransferase like 1511p14.1CV:PGCnp
6764ST5DENND2B | HTS1 | p126suppression of tumorigenicity 511p15CV:PGCnp
DMG:Wockner_2014
1200TPP1CLN2 | GIG1 | LPIC | SCAR7 | TPP-1tripeptidyl peptidase I11p15CV:PGCnp
GO_Annotation
51700CYB5R2B5R.2cytochrome b5 reductase 211p15.4CV:PGCnp
116534MRGPREGPR167 | MGRF | MRGEMAS related GPR family member E11p15.4CV:PGCnp
DMG:Wockner_2014
51286CEND1BM88cell cycle exit and neuronal differentiation 111p15.5DMG:Wockner_2014STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10410IFITM31-8U | DSPA2b | IP15interferon induced transmembrane protein 311p15.5CV:PGCnp
DEG:Sanders_2013
Expression
PMID:cooccur
3265HRASC-BAS/HAS | C-H-RAS | C-HA-RAS1 | CTLO | H-RASIDX | HAMSV | HRAS1 | RASH1 | p21rasHarvey rat sarcoma viral oncogene homolog11p15.5CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
5002SLC22A18BWR1A | BWSCR1A | HET | IMPT1 | ITM | ORCTL2 | SLC22A1L | TSSC5 | p45-BWR1Asolute carrier family 22 member 1811p15.5CV:PGCnp
10581IFITM21-8D | DSPA2cinterferon induced transmembrane protein 211p15.5Expression
PMID:cooccur
1500CTNND1CAS | CTNND | P120CAS | P120CTN | p120 | p120(CAS) | p120(CTN)catenin delta 111q11CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5024P2RX3P2X3purinergic receptor P2X 311q12CV:PGCnpGPCR SIGNALLING
710SERPING1C1IN | C1INH | C1NH | HAE1 | HAE2serpin peptidase inhibitor, clade G (C1 inhibitor), member 111q12.1CV:PGCnp
Expression
219539YPEL4-yippee like 411q12.1CV:PGCnp
DMG:Wockner_2014
64852TUT1PAPD2 | RBM21 | STARPAP | TUTase | URLC6terminal uridylyl transferase 1, U6 snRNA-specific11q12.2CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
221091LRRN4CL-LRRN4 C-terminal like11q12.3DMG:Wockner_2014
6494SIPA1SPA1signal-induced proliferation-associated 111q13CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
5936RBM4LARK | RBM4A | ZCCHC21 | ZCRB3ARNA binding motif protein 411q13CV:PGCnp
3338DNAJC4DANJC4 | HSPF2 | MCG18DnaJ heat shock protein family (Hsp40) member C411q13CV:PGCnp
57804POLD4POLDS | p12polymerase (DNA) delta 4, accessory subunit11q13PMID:cooccur
582BBS1BBS2L2Bardet-Biedl syndrome 111q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
84304NUDT22-nudix hydrolase 2211q13.1CV:PGCnp
Expression
23769FLRT1SPG68fibronectin leucine rich transmembrane protein 111q13.1CV:PGCnp
89ACTN3-actinin alpha 3 (gene/pseudogene)11q13.1CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
283248RCOR2-REST corepressor 211q13.1CV:PGCnp
9610RIN1-Ras and Rab interactor 111q13.2CV:PGCnp
219931TPCN2SHEP10 | TPC2two pore segment channel 211q13.3CV:GWASdb
CV:PGCnp
PMID:cooccur
5058PAK1PAKalphap21 protein (Cdc42/Rac)-activated kinase 111q13.5-q14.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
65987KCTD14-potassium channel tetramerization domain containing 1411q14.1CV:GWASdb
CV:PGCnp
7069THRSPLPGP1 | Lpgp | S14 | SPOT14 | THRPthyroid hormone responsive11q14.1CV:PGCnp
91801ALKBH8ABH8 | TRM9 | TRMT9alkB homolog 8, tRNA methyltransferase11q22.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
7379UPK2UP2 | UPIIuroplakin 211q23CV:PGCnp
GSMA_I
916CD3EIMD18 | T3E | TCRECD3e molecule11q23CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_I
54970TTC12TPARMtetratricopeptide repeat domain 1211q23.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
2542SLC37A4G6PT1 | G6PT2 | G6PT3 | GSD1b | GSD1c | GSD1d | PRO0685 | TRG-19 | TRG19solute carrier family 37 member 411q23.3CV:PGCnp
GSMA_I
89944GLB1L2MST114 | MSTP114galactosidase beta 1 like 211q25CV:PGCnp
6857SYT1P65 | SVP65 | SYTsynaptotagmin 112cen-q21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8082SSPNDAGA5 | KRAG | NSPN | SPN1 | SPN2sarcospan12p11.2CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
4033LRMPJAW1lymphoid restricted membrane protein12p12.1CV:PGCnp
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
4257MGST1GST12 | MGST | MGST-Imicrosomal glutathione S-transferase 112p12.3-p12.1CV:PGCnp
1911PHC1EDR1 | HPH1 | MCPH11 | RAE28polyhomeotic homolog 112p13CV:PGCnp
DMG:Jaffe_2016
Expression
Chromatin Remodeling Genes
9573GDF3KFS3 | MCOP7 | MCOPCB6growth differentiation factor 312p13.1CV:PGCnp
PMID:cooccur
2A2MA2MD | CPAMD5 | FWP007 | S863-7alpha-2-macroglobulin12p13.31CV:PGCnp
DMG:Wockner_2014
Network
79602ADIPOR2ACDCR2 | PAQR2adiponectin receptor 212p13.31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
359787DPPA3STELLAdevelopmental pluripotency associated 312p13.31CV:PGCnp
84318CCDC77-coiled-coil domain containing 7712p13.33CV:PGCnp
DMG:Jaffe_2016
225ABCD2ABC39 | ALDL1 | ALDR | ALDRP | hALDRATP binding cassette subfamily D member 212q12CV:PGCnp
51474LIMA1EPLIN | SREBP3LIM domain and actin binding 112q13CV:PGCnp
DMG:Wockner_2014
23017FAIM2LFG | LFG2 | NGP35 | NMP35 | TMBIM2Fas apoptotic inhibitory molecule 212q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3626INHBCIHBCinhibin beta C12q13.1CV:PGCnp
112802KRT71HYPT13 | K6IRS1 | KRT6IRS | KRT6IRS1keratin 7112q13.13CV:GWASdb
CV:PGCnp
23583SMUG1FDG | HMUDG | UNG3single-strand-selective monofunctional uracil-DNA glycosylase 112q13.13CV:PGCnp
PMID:cooccur
3695ITGB7-integrin subunit beta 712q13.13CV:PGCnp
DMG:vanEijk_2014
Network
319APOFApo-F | LTIPapolipoprotein F12q13.3CV:PGCnp
GO_Annotation
5939RBMS2SCR3RNA binding motif, single stranded interacting protein 212q13.3CV:PGCnp
4035LRP1A2MR | APOER | APR | CD91 | IGFBP3R | LRP | LRP1A | TGFBR5LDL receptor related protein 112q13.3CV:PGCnp
DNM:Girard_2011
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51561IL23AIL-23 | IL-23A | IL23P19 | P19 | SGRFinterleukin 23 subunit alpha12q13.3CV:PGCnp
83729INHBE-inhibin beta E12q13.3CV:PGCnp
PMID:cooccur
64431ACTR6ARP6 | CDA12 | HSPC281 | MSTP136 | hARP6 | hARPXARP6 actin-related protein 6 homolog (yeast)12q23.1CV:PGCnp
DMG:Nishioka_2013
51019CCDC53CGI-116coiled-coil domain containing 5312q23.2CV:PGCnp
DMG:Jaffe_2016
Network
5027P2RX7P2X7purinergic receptor P2X 712q24CV:PGCnp
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
1240CMKLR1CHEMERINR | ChemR23 | DEZ | RVER1chemerin chemokine-like receptor 112q24.1CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6927HNF1AHNF-1A | HNF1 | IDDM20 | LFB1 | MODY3 | TCF-1 | TCF1HNF1 homeobox A12q24.2CV:PGCnp
DMG:Wockner_2014
Network
26353HSPB8CMT2L | DHMN2 | E2IG1 | H11 | HMN2 | HMN2A | HSP22heat shock protein family B (small) member 812q24.23CV:PGCnp
23067SETD1BKMT2G | Set1BSET domain containing 1B12q24.31CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
26278SACSARSACS | DNAJC29 | PPP1R138 | SPAX6sacsin molecular chaperone13q12CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
10161LPAR6ARWH1 | HYPT8 | LAH3 | P2RY5 | P2Y5lysophosphatidic acid receptor 613q14CV:PGCnp
10150MBNL2MBLL | MBLL39 | PRO2032muscleblind like splicing regulator 213q32.1CV:GWASdb
CV:PGCnp
23348DOCK9ZIZ1 | ZIZIMIN1dedicator of cytokinesis 913q32.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
54841BIVM-basic, immunoglobulin-like variable motif containing13q33.1CV:PGCnp
DMG:Nishioka_2013
113622ADPRHL1ARH2ADP-ribosylhydrolase like 113q34CV:PGCnp
DMG:Wockner_2014
599BCL2L2BCL-W | BCL2-L-2 | BCLW | PPP1R51BCL2 like 214q11.2-q12DEG:Sanders_2013
GSMA_I
9472AKAP6ADAP100 | ADAP6 | AKAP100 | PRKA6 | mAKAPA-kinase anchoring protein 614q12CV:PGCnp
GSMA_I
Network
CompositeSet
Darnell FMRP targets
55012PPP2R3CC14orf10 | G4-1 | G5prprotein phosphatase 2 regulatory subunit B'', gamma14q13.2CV:PGCnp
5890RAD51BR51H2 | RAD51L1 | REC2RAD51 paralog B14q23-q24.2CV:PGCnp
DMG:Montano_2016
145407C14orf37c14_5376chromosome 14 open reading frame 3714q23.1CV:PGCnp
DMG:Jaffe_2016
2877GPX2GI-GPx | GPRP | GPRP-2 | GPx-2 | GPx-GI | GSHPX-GI | GSHPx-2glutathione peroxidase 214q24.1PMID:cooccur
26094DCAF4WDR21 | WDR21ADDB1 and CUL4 associated factor 414q24.3CV:PGCnp
DMG:Wockner_2014
9990SLC12A6ACCPN | KCC3 | KCC3A | KCC3Bsolute carrier family 12 member 615q13CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
56924PAK6PAK5p21 protein (Cdc42/Rac)-activated kinase 615q14CV:GWAScat
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
55505NOP10DKCB1 | NOLA3 | NOP10PNOP10 ribonucleoprotein15q14-q15CV:PGCnp
161823ADAL-adenosine deaminase-like15q15.3CV:PGCnp
PMID:cooccur
5371PMLMYL | PP8675 | RNF71 | TRIM19promyelocytic leukemia15q22CV:PGCnp
DNM:Xu_2012
Network
PMID:cooccur
CompositeSet
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
10363HMG20AHMGX1 | HMGXB1high mobility group 20A15q24CV:PGCnp
PMID:cooccur
1143CHRNB4-cholinergic receptor nicotinic beta 4 subunit15q24CV:PGCnp
GO_Annotation
PMID:cooccur
4351MPICDG1B | PMI | PMI1mannose phosphate isomerase15q24.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
57538ALPK3MAK | MIDORIalpha kinase 315q25.2CV:PGCnp
145864HAPLN3EXLD1 | HsT19883hyaluronan and proteoglycan link protein 315q26.1CV:PGCnp
PMID:cooccur
140460ASB7-ankyrin repeat and SOCS box containing 715q26.3CV:PGCnp
DMG:Jaffe_2016
145748LYSMD4-LysM domain containing 415q26.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
283777FAM169B-family with sequence similarity 169 member B15q26.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
64927TTC23HCC-8tetratricopeptide repeat domain 2315q26.3CV:GWASdb
CV:PGCnp
29108PYCARDASC | CARD5 | TMS | TMS-1 | TMS1PYD and CARD domain containing16p11.2CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
CompositeSet
7041TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 116p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
283897C16orf54-chromosome 16 open reading frame 5416p11.2CNV:YES
CV:PGCnp
GSMA_IIE
23475QPRTHEL-S-90n | QPRTasequinolinate phosphoribosyltransferase16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
5261PHKG2GSD9Cphosphorylase kinase, gamma 2 (testis)16p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
27040LATLAT1 | pp36linker for activation of T-cells16p11.2CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
9961MVPLRP | VAULT1major vault protein16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
6911TBX6SCDO5T-box 616p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
368ABCC6ABC34 | ARA | EST349056 | GACI2 | MLP1 | MOAT-E | MOATE | MRP6 | PXE | PXE1 | URG7ATP binding cassette subfamily C member 616p13.1CNV:YES
CV:GWASdb
CV:PGCnp
GSMA_IIE
PMID:cooccur
89927C16orf45-chromosome 16 open reading frame 4516p13.11CNV:YES
CV:PGCnp
GSMA_IIE
7755ZNF205RhitH | ZNF210 | Zfp13zinc finger protein 20516p13.3CV:PGCnp
90864SPSB3C16orf31 | SSB3splA/ryanodine receptor domain and SOCS box containing 316p13.3CV:PGCnp
DMG:Wockner_2014
339123JMJD8C16orf20 | PP14397jumonji domain containing 816p13.3CV:PGCnp
57407NMRAL1HSCARG | SDR48A1NmrA-like family domain containing 116p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4504MT3GIF | GIFB | GRIF | ZnMT3metallothionein 316q13CV:PGCnp
GO_Annotation
PMID:cooccur
55238SLC38A7SNAT7solute carrier family 38 member 716q21CV:GWAScat
CV:PGC128
CV:PGCnp
51673TPPP3CGI-38 | TPPP/p20 | p20 | p25gammatubulin polymerization-promoting protein family member 316q22.1CV:PGCnp
DMG:Jaffe_2016
79567FAM65A-family with sequence similarity 65 member A16q22.1CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
123904NRN1LUNQ2446neuritin 1 like16q22.1CV:PGCnp
1728NQO1DHQU | DIA4 | DTD | NMOR1 | NMORI | QR1NAD(P)H dehydrogenase, quinone 116q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
55815TSNAXIP1TXI1translin-associated factor X interacting protein 116q22.1CV:PGCnp
DMG:Wockner_2014
54768HYDINCILD5 | HYDIN1 | HYDIN2 | PPP1R31HYDIN, axonemal central pair apparatus protein16q22.2CV:PGCnp
PMID:cooccur
197257LDHDDLDlactate dehydrogenase D16q23.1CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
1013CDH15CDH14 | CDH3 | CDHM | MCAD | MRD3cadherin 1516q24.3CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
92822ZNF276CENP-Z | CENPZ | ZADT | ZFP276 | ZNF477zinc finger protein 27616q24.3CV:PGCnp
230ALDOCALDCaldolase, fructose-bisphosphate C17cen-q12PMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
51393TRPV2VRL | VRL-1 | VRL1transient receptor potential cation channel subfamily V member 217p11.2CV:PGCnp
59344ALOXE3ARCI3 | E-LOX | eLOX-3 | eLOX3arachidonate lipoxygenase 317p13.1CV:PGCnp
DMG:Jaffe_2016
1742DLG4PSD95 | SAP-90 | SAP90discs large homolog 417p13.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
22899ARHGEF15ARGEF15 | E5 | Ephexin5 | Vsm-RhoGEFRho guanine nucleotide exchange factor 1517p13.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8711TNK1-tyrosine kinase, non-receptor, 117p13.1CV:PGCnp
9527GOSR1GOLIM2 | GOS-28 | GOS28 | GOS28/P28 | GS28 | P28golgi SNAP receptor complex member 117q11CV:PGCnp
GO_Annotation
2886GRB7-growth factor receptor bound protein 717q12CV:PGCnp
Network
6143RPL19L19ribosomal protein L1917q12DMG:Jaffe_2016G2Cdb.humanPSD
G2Cdb.humanPSP
114881OSBPL7ORP7oxysterol binding protein like 717q21CV:PGCnp
DMG:Wockner_2014
9862MED24ARC100 | CRSP100 | CRSP4 | DRIP100 | MED5 | THRAP4 | TRAP100mediator complex subunit 2417q21.1CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
113277TMEM106A-transmembrane protein 106A17q21.31CV:PGCnp
2896GRNCLN11 | GEP | GP88 | PCDGF | PEPI | PGRNgranulin17q21.32CV:PGCnp
PMID:cooccur
516ATP5G1ATP5A | ATP5GATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9)17q21.32CV:PGCnp
DMG:Jaffe_2016
10241CALCOCO2NDP52calcium binding and coiled-coil domain 217q21.32CV:PGCnp
55771PRR11-proline rich 1117q22CV:PGCnp
Expression
9256BZRAP1PBR-IP | PRAX-1 | PRAX1 | RIM-BP1 | RIMBP1benzodiazepine receptor (peripheral) associated protein 117q22CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Fromer_2014
GPCR SIGNALLING
CompositeSet
Darnell FMRP targets
11011TLK2HsHPK | PKU-ALPHAtousled like kinase 217q23CV:PGCnp
DNM:Gulsuner_2013
Network
29115SAP30BPHCNGP | HTRG | HTRPSAP30 binding protein17q25.1CV:PGCnp
DNM:Xu_2012
CompositeSet
5831PYCR1ARCL2B | ARCL3B | P5C | P5CR | PIG45 | PP222 | PRO3 | PYCRpyrroline-5-carboxylate reductase 117q25.3PMID:cooccurG2Cdb.humanPSD
G2Cdb.humanPSP
79755ZNF750ZFP750zinc finger protein 75017q25.3CV:GWASdb
CV:PGCnp
PMID:cooccur
114897C1QTNF1CTRP1 | GIP | ZSIG37C1q and tumor necrosis factor related protein 117q25.3CV:PGCnp
64122FN3K-fructosamine 3 kinase17q25.3CV:PGCnp
DMG:Jaffe_2016
80323CCDC68SE57-1coiled-coil domain containing 6818q21CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
PMID:cooccur
83473KATNAL2-katanin p60 subunit A like 218q21.1CV:PGCnp
CV:PheWAS
25914RTTN-rotatin18q22.2CV:PGCnp
DMG:Jaffe_2016
DNM:McCarthy_2014
353088ZNF429-zinc finger protein 42919p12CV:PGCnp
DMG:Wockner_2014
9170LPAR2EDG-4 | EDG4 | LPA-2 | LPA2lysophosphatidic acid receptor 219p12CV:PGCnp
DMG:Jaffe_2016
LK:YES
57693ZNF317-zinc finger protein 31719p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
57153SLC44A2CTL2 | PP1292solute carrier family 44 member 219p13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
2639GCDHACAD5 | GCDglutaryl-CoA dehydrogenase19p13.2CV:PGCnp
DMG:Wockner_2014
50509COL5A3-collagen type V alpha 319p13.2CV:GWASdb
CV:PGCnp
23526HMHA1ARHGAP45 | HA-1 | HLA-HA1histocompatibility (minor) HA-119p13.3CV:PGCnp
DEG:Zhao_2015
268AMHMIF | MISanti-Mullerian hormone19p13.3CV:PGCnp
PMID:cooccur
399473SPRED3Eve-3 | spred-3sprouty related, EVH1 domain containing 319q13CV:PGCnp
DMG:Montano_2016
147700KLC3KLC2 | KLC2L | KLCt | KNS2Bkinesin light chain 319q13CV:PGCnp
DMG:Wockner_2014
7288TULP2CT65 | TUBL2tubby like protein 219q13.1CV:PGCnp
DMG:Wockner_2014
558AXLARK | JTK11 | Tyro7 | UFOAXL receptor tyrosine kinase19q13.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
148103ZNF599-zinc finger protein 59919q13.11CV:PGCnp
DMG:Jaffe_2016
147929ZNF565-zinc finger protein 56519q13.12CV:PGCnp
DNM:Girard_2011
CompositeSet
84807NFKBIDIkappaBNS | TA-NFKBHNFKB inhibitor delta19q13.12PMID:cooccur
2901GRIK5EAA2 | GRIK2 | GluK5 | KA2glutamate ionotropic receptor kainate type subunit 519q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9310ZNF235ANF270 | HZF6 | ZFP93 | ZNF270zinc finger protein 23519q13.2CV:PGCnp
6261RYR1CCO | MHS | MHS1 | PPP1R137 | RYDR | RYR | RYR-1 | SKRRryanodine receptor 119q13.2CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
2523FUT1H | HH | HSCfucosyltransferase 1 (H blood group)19q13.3CV:PGCnp
2696GIPRPGQTL2gastric inhibitory polypeptide receptor19q13.3CV:PGCnp
PMID:cooccur
8993PGLYRP1PGLYRP | PGRP | PGRP-S | PGRPS | TAG7 | TNFSF3Lpeptidoglycan recognition protein 119q13.32DMG:Wockner_2014
4606MYBPC2MYBPC | MYBPCFmyosin binding protein C, fast type19q13.33CV:PGCnp
93233CCDC114CILD20coiled-coil domain containing 11419q13.33CV:PGCnp
DMG:Wockner_2014
51070NOSIPCGI-25nitric oxide synthase interacting protein19q13.33CV:PGCnp
DMG:Jaffe_2016
57333RCN3RLP49reticulocalbin 319q13.33CV:PGCnp
126129CPT1CCATL1 | CPT1-B | CPT1P | CPTI-B | CPTIC | SPG73carnitine palmitoyltransferase 1C19q13.33CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
54854FAM83E-family with sequence similarity 83 member E19q13.33CV:PGCnp
Expression
84446BRSK1hSAD1BR serine/threonine kinase 119q13.4CV:PGCnp
DNM:Fromer_2014
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
125875CLDND2-claudin domain containing 219q13.41DMG:vanEijk_2014
84671ZNF347ZNF1111zinc finger protein 34719q13.42DMG:Jaffe_2016
147798TMC4-transmembrane channel like 419q13.42CV:PGCnp
DMG:Jaffe_2016
125965COX6B2COXVIB2 | CT59cytochrome c oxidase subunit 6B219q13.42CV:PGCnp
DMG:Wockner_2014
148170CDC42EP5Borg3 | CEP5CDC42 effector protein 519q13.42CV:PGCnp
DMG:Wockner_2014
6861SYT5-synaptotagmin 519q13.42|11pCV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
GO_Annotation
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
163259DENND2CdJ1156J9.1DENN domain containing 2C1p13.2CV:PGCnp
GSMA_I
GSMA_IIA
2944GSTM1GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1glutathione S-transferase mu 11p13.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
2707GJB3CX31 | DFNA2 | DFNA2B | EKVgap junction protein beta 31p34CV:PGCnp
DMG:Jaffe_2016
128218TMEM125-transmembrane protein 1251p34.2CV:PGCnp
54933RHBDL2RRP2rhomboid, veinlet-like 2 (Drosophila)1p34.3CV:PGCnp
GO_Annotation
7802DNALI1P28 | dJ423B22.5 | hp28dynein axonemal light intermediate chain 11p35.1CV:PGCnp
2582GALESDR1E1UDP-galactose-4-epimerase1p36-p35PMID:cooccur
79140CCDC28B-coiled-coil domain containing 28B1p36.11-p34.2CV:PGCnp
DMG:vanEijk_2014
23569PADI4PAD | PAD4 | PADI5 | PDI4 | PDI5peptidyl arginine deiminase, type IV1p36.13CV:GWASdb
CV:PGCnp
PMID:cooccur
9696CROCCROLTciliary rootlet coiled-coil, rootletin1p36.13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
978CDACDDcytidine deaminase1p36.2-p35CV:PGCnp
DMG:Montano_2016
PMID:cooccur
4524MTHFR-methylenetetrahydrofolate reductase (NAD(P)H)1p36.3Association
Core
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
57449PLEKHG5CMTRIC | DSMA4 | GEF720 | Syx | Techpleckstrin homology and RhoGEF domain containing G51p36.31CV:PGCnp
DMG:Jaffe_2016
10712FAM189BC1orf2 | COTE1family with sequence similarity 189 member B1q21CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GSMA_I
GSMA_IIA
7059THBS3TSP3thrombospondin 31q21CV:PGCnp
GSMA_I
GSMA_IIA
11189CELF3BRUNOL1 | CAGH4 | ERDA4 | ETR-1 | TNRC4CUGBP, Elav-like family member 31q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
5872RAB13GIG4RAB13, member RAS oncogene family1q21.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
9900SV2ASV2synaptic vesicle glycoprotein 2A1q21.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
EXOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10903MTMR11CRAmyotubularin related protein 111q21.2CV:PGCnp
GSMA_I
GSMA_IIA
80308FLAD1FAD1 | FADS | PP591flavin adenine dinucleotide synthetase 11q21.3DMG:vanEijk_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
55204GOLPH3LGPP34Rgolgi phosphoprotein 3 like1q21.3CV:PGCnp
GSMA_I
GSMA_IIA
5087PBX1-pre-B-cell leukemia homeobox 11q23CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
84134TOMM40LTOMM40Btranslocase of outer mitochondrial membrane 40 like1q23.3CV:PGCnp
GSMA_IIA
Ascano FMRP targets
919CD247CD3-ZETA | CD3H | CD3Q | CD3Z | IMD25 | T3Z | TCRZCD247 molecule1q24.2CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
2494NR5A2B1F | B1F2 | CPF | FTF | FTZ-F1 | FTZ-F1beta | LRH-1 | LRH1 | hB1F-2nuclear receptor subfamily 5 group A member 21q32.1CV:PGCnp
DMG:Jaffe_2016
10741RBBP9BOG | RBBP10retinoblastoma binding protein 920p11.2CV:PGCnp
GSMA_I
54453RIN2MACS | RASSF4Ras and Rab interactor 220p11.22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
81031SLC2A10ATS | GLUT10solute carrier family 2 member 1020q13.1CV:GWASdb
CV:PGCnp
23613ZMYND8PRKCBP1 | PRO2893 | RACK7zinc finger MYND-type containing 820q13.12CV:PGCnp
Network
2952GSTT1-glutathione S-transferase theta 122q11.23Association
GSMA_I
PMID:cooccur
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
27124INPP5JINPP5 | PIB5PA | PIPPinositol polyphosphate-5-phosphatase J22q12.2CV:GWASdb
CV:PGCnp
PMID:cooccur
8224SYN3-synapsin III22q12.3Association
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
1565CYP2D6CPD6 | CYP2D | CYP2D7AP | CYP2D7BP | CYP2D7P2 | CYP2D8P2 | CYP2DL1 | CYPIID6 | P450-DB1 | P450C2D | P450DB1cytochrome P450 family 2 subfamily D member 622q13.1ADT:Sun_2012
Association
CV:PGCnp
PMID:cooccur
4357MPSTMST | TST2 | TUM1mercaptopyruvate sulfurtransferase22q13.1CV:PGCnp
DMG:Nishioka_2013
9582APOBEC3BA3B | APOBEC1L | ARCD3 | ARP4 | DJ742C19.2 | PHRBNL | bK150C2.2apolipoprotein B mRNA editing enzyme catalytic subunit 3B22q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55586MIOXALDRL6myo-inositol oxygenase22q13.3CV:PGCnp
Expression
79924ADM2AM2 | dJ579N16.4adrenomedullin 222q13.33CV:PGCnp
1375CPT1BCPT1-M | CPT1M | CPTI | CPTI-M | M-CPT1 | MCCPT1 | MCPT1carnitine palmitoyltransferase 1B22q13.33CV:PGCnp
PMID:cooccur
51318MRPL35L35mt | MRP-L35mitochondrial ribosomal protein L352p11.2CV:PGCnp
Expression
GSMA_I
151516ASPRV1MUNO | SASP | SASPase | Tapsaspartic peptidase, retroviral-like 12p13.3CV:PGCnp
DMG:Montano_2016
23301EHBP1HPC12 | NACSINEH domain binding protein 12p15CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Ascano FMRP targets
494143CHAC2-ChaC, cation transport regulator homolog 2 (E. coli)2p16CV:PGCnp
9378NRXN1Hs.22998 | PTHSL2 | SCZD17neurexin 12p16.3CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3973LHCGRHHG | LCGR | LGR2 | LH/CG-R | LH/CGR | LHR | LHRHR | LSH-R | ULG5luteinizing hormone/choriogonadotropin receptor2p21CV:PGCnp
130589GALMBLOCK25 | GLAT | HEL-S-63p | IBD1galactose mutarotase (aldose 1-epimerase)2p22.1CV:PGCnp
79833GEMIN6-gem nuclear organelle associated protein 62p22.1CV:PGCnp
DMG:Nishioka_2013
57159TRIM54MURF | MURF-3 | RNF30 | muRF3tripartite motif containing 542p23.3CV:PGCnp
9913SUPT7LSPT7L | STAF65 | STAF65(gamma) | STAF65G | SUPT7HSPT7-like STAGA complex gamma subunit2p23.3CV:PGCnp
DMG:Nishioka_2013
7851MALLBENEmal, T-cell differentiation protein-like2q13CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
344148NCKAP5ERIH1 | ERIH2 | NAP5NCK associated protein 52q21.2CV:PGCnp
DNM:Guipponi_2014
GSMA_I
GSMA_IIA
84083ZRANB34933425L19Rik | AH2zinc finger RANBP2-type containing 32q21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
7130TNFAIP6TSG-6 | TSG6TNF alpha induced protein 62q23.3CV:PGCnp
GSMA_IIA
6335SCN9AETHA | FEB3B | GEFSP7 | HSAN2D | NE-NA | NENA | Nav1.7 | PN1 | SFNPsodium voltage-gated channel alpha subunit 92q24CV:PGCnp
GSMA_IIA
EXCITABILITY
57282SLC4A10NBCn2 | NCBEsolute carrier family 4 member 102q24.2CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_IIA
ION BALANCE
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
6323SCN1AEIEE6 | FEB3 | FEB3A | FHM3 | GEFSP2 | HBSCI | NAC1 | Nav1.1 | SCN1 | SMEIsodium voltage-gated channel alpha subunit 12q24.3CV:PGCnp
GSMA_IIA
PMID:cooccur
EXCITABILITY
79675FASTKD1-FAST kinase domains 12q31CV:PGCnp
DMG:Wockner_2014
51661FKBP7FKBP23 | PPIaseFK506 binding protein 72q31.2DMG:Nishioka_2013
285025CCDC141CAMDIcoiled-coil domain containing 1412q31.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
142679DUSP19DUSP17 | LMWDSP3 | SKRP1 | TS-DSP1dual specificity phosphatase 192q32.1CV:PGCnp
DMG:Nishioka_2013
64172OSGEPL1Qri7O-sialoglycoprotein endopeptidase-like 12q32.2CV:PGCnp
DMG:Wockner_2014
6775STAT4SLEB11signal transducer and activator of transcription 42q32.2-q32.3CV:PGCnp
316AOX1AO | AOH1aldehyde oxidase 12q33CV:PGCnp
DNM:Fromer_2014
CompositeSet
130132RFTN2C2orf11 | Raftlin-2raftlin family member 22q33.1CV:PGCnp
DMG:Wockner_2014
2825GPR1-G protein-coupled receptor 12q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
130752MDH1BRP11-95H11malate dehydrogenase 1B2q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
6556SLC11A1LSH | NRAMP | NRAMP1solute carrier family 11 member 12q35CV:GWASdb
GSMA_IIA
GSMA_IIE
50485SMARCAL1HARP | HHARPSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
Chromatin Remodeling Genes
80309SPHKAPSKIPSPHK1 interactor, AKAP domain containing2q36CV:PGCnpCompositeSet
Darnell FMRP targets
1146CHRNGACHRGcholinergic receptor nicotinic gamma subunit2q37.1DNM:Guipponi_2014
GO_Annotation
PMID:cooccur
79083MLPHSLAC2-Amelanophilin2q37.3CV:PGCnp
DMG:Nishioka_2013
4485MST1D3F15S2 | DNF15S2 | HGFL | MSP | NF15S2macrophage stimulating 13p21Expression
GO_Annotation
3913LAMB2LAMS | NPHS5laminin subunit beta 23p21CV:PGCnp
GO_Annotation
1294COL7A1EBD1 | EBDCT | EBR1 | NDNC8collagen type VII alpha 13p21.1CV:PGCnp
956ENTPD3CD39L3 | HB6 | NTPDase-3ectonucleoside triphosphate diphosphohydrolase 33p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
51447IP6K2IHPK2 | PIUSinositol hexakisphosphate kinase 23p21.31CV:PGCnp
84276NICN1-nicolin 13p21.31CV:PGCnp
79442LRRC2-leucine rich repeat containing 23p21.31CV:PGCnp
22906TRAK1MILT1 | OIP106trafficking protein, kinesin binding 13p22.1CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
151651EFHBCFAP21EF-hand domain family member B3p24.3CV:PGCnp
GSMA_I
9901SRGAP3ARHGAP14 | MEGAP | SRGAP2 | WRPSLIT-ROBO Rho GTPase activating protein 33p25.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
79669C3orf52TTMPchromosome 3 open reading frame 523q13.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
2596GAP43B-50 | PP46growth associated protein 433q13.31CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
CANABINOID
DOPAMINE
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
10840ALDH1L110-FTHFDH | 10-fTHF | FDH | FTHFDaldehyde dehydrogenase 1 family member L13q21.3DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
5274SERPINI1PI12 | neuroserpinserpin peptidase inhibitor, clade I (neuroserpin), member 13q26.1CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
151827LRRC34-leucine rich repeat containing 343q26.2CV:PGCnp
339829CCDC39CILD14 | FAP59coiled-coil domain containing 393q26.33CV:PGCnp
DNM:Xu_2012
Expression
CompositeSet
10195ALG3CDG1D | CDGS4 | CDGS6 | D16Ertd36e | NOT56L | Not56 | notALG3, alpha-1,3- mannosyltransferase3q27.1DMG:vanEijk_2014
51088KLHL5-kelch like family member 54p14CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
55584CHRNA9HSA243342 | NACHRA9cholinergic receptor nicotinic alpha 9 subunit4p14CV:GWASdb
CV:PGCnp
GO_Annotation
952CD38ADPRC 1 | ADPRC1CD38 molecule4p15Association
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10886NPFFR2GPR74 | HLWAR77 | NPFF2 | NPGPRneuropeptide FF receptor 24q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
10144FAM13AARHGAP48 | FAM13A1family with sequence similarity 13 member A4q22.1CV:GWAScat
CV:PGCnp
CV:PheWAS
Ascano FMRP targets
285513GPRIN3GRIN3GPRIN family member 34q22.1CV:PGCnp
DNM:Xu_2012
CompositeSet
133308SLC9B2NHA2 | NHE10 | NHEDC2solute carrier family 9 member B24q24CV:PGCnp
150159SLC9B1NHA1 | NHEDC1solute carrier family 9 member B14q24CV:PGCnp
27071DAPP1BAM32dual adaptor of phosphotyrosine and 3-phosphoinositides4q25-q27CV:PGCnp
287ANK2ANK-2 | LQT4 | brank-2ankyrin 2, neuronal4q25-q27CV:GWASdb
CV:PGCnp
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
201799TMEM154-transmembrane protein 1544q31.3CV:GWASdb
CV:PGCnp
23321TRIM2CMT2R | RNF86tripartite motif containing 24q31.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
7097TLR2CD282 | TIL4toll like receptor 24q32CV:PGCnp
PMID:cooccur
1519CTSOCTSO1cathepsin O4q32.1CV:PGCnp
55601DDX60-DEXD/H-box helicase 604q32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
51166AADATKAT2 | KATIIaminoadipate aminotransferase4q33CV:PGCnp
DMG:Wockner_2014
GO_Annotation
8001GLRA3-glycine receptor alpha 34q34.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7098TLR3CD283 | IIAE2toll like receptor 34q35CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3977LIFRCD118 | LIF-R | SJS2 | STWS | SWSleukemia inhibitory factor receptor alpha5p13-p12PMID:cooccur
26064RAI14NORPEG | RAI13retinoic acid induced 145p13.3-p13.2CV:PGCnp
DNM:McCarthy_2014
Network
5122PCSK1BMIQ12 | NEC1 | PC1 | PC3 | SPC3proprotein convertase subtilisin/kexin type 15q15-q21CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
8382NME5NM23-H5 | NM23H5 | RSPH23NME/NM23 family member 55q31CV:PGCnp
GSMA_I
79628SH3TC2CMT4C | MNMNSH3 domain and tetratricopeptide repeats 25q32CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
51520LARSHSPC192 | ILFS1 | LARS1 | LEURS | LEUS | LFIS | LRS | PIG44 | RNTLS | hr025Clleucyl-tRNA synthetase5q32CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
Ascano FMRP targets
84466MEGF10EMARDDmultiple EGF like domains 105q33Association
CV:PGCnp
DMG:Wockner_2014
GR_WM
GSMA_I
Network
PMID:cooccur
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
345462ZNF879DKFZp686E2433zinc finger protein 8795q35.3CV:PGCnp
GSMA_IIA
28978TMEM14AC6orf73 | PTD011transmembrane protein 14A6p12.2CV:PGCnp
GSMA_IIE
25862USP49-ubiquitin specific peptidase 496p21CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
387032ZKSCAN4P1P373C6 | ZNF307 | ZNF427 | ZSCAN36zinc finger with KRAB and SCAN domains 46p21CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
89953KLC4KNSL8 | bA387M24.3kinesin light chain 46p21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIE
INTRACELLULAR TRAFFICKING
3108HLA-DMAD6S222E | DMA | HLADM | RING6major histocompatibility complex, class II, DM alpha6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
58530LY6G6DC6orf23 | G6D | LY6-D | MEGT1 | NG25lymphocyte antigen 6 complex, locus G6D6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
80736SLC44A4C6orf29 | CTL4 | NG22 | TPPTsolute carrier family 44 member 46p21.3CV:PGCnp
GSMA_I
PMID:cooccur
10107TRIM10HERF1 | RFB30 | RNF9tripartite motif containing 106p21.3CV:PGCnp
GSMA_I
PMID:cooccur
2968GTF2H4P52 | TFB2 | TFIIHgeneral transcription factor IIH subunit 46p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
79136LY6G6EC6orf22 | G6elymphocyte antigen 6 complex, locus G6E (pseudogene)6p21.3CV:PGCnp
3305HSPA1LHSP70-1L | HSP70-HOM | HSP70T | hum70theat shock protein family A (Hsp70) member 1 like6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3010HIST1H1TH1.6 | H1FT | H1t | dJ221C16.2histone cluster 1, H1t6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
534ATP6V1G2ATP6G | ATP6G2 | NG38 | VMA10ATPase H+ transporting V1 subunit G26p21.3GO_Annotation
GSMA_I
ION BALANCE
CompositeSet
7916PRRC2ABAT2 | D6S51 | D6S51E | G2proline rich coiled-coil 2A6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
CompositeSet
578BAK1BAK | BAK-LIKE | BCL2L7 | CDN1BCL2 antagonist/killer 16p21.3Association
CV:PGCnp
GSMA_I
1192CLIC1G6 | NCC27chloride intracellular channel 16p21.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
Network
3077HFEHFE1 | HH | HLA-H | MVCD7 | TFQTL2hemochromatosis6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
5460POU5F1OCT3 | OCT4 | OTF-3 | OTF3 | OTF4 | Oct-3 | Oct-4POU class 5 homeobox 16p21.31CV:PGCnp
GSMA_I
154150HDGFL1PWWP1 | dJ309H15.1hepatoma derived growth factor-like 16p22.3CV:GWASdb
CV:PGCnp
GSMA_I
167681PRSS35C6orf158 | dJ223E3.1protease, serine 356q14.2CV:PGCnp
GO_Annotation
PMID:cooccur
389421LIN28BCSDD2lin-28 homolog B6q21CV:PGCnp
CV:PheWAS
10758TRAF3IP2ACT1 | C6orf2 | C6orf4 | C6orf5 | C6orf6 | CANDF8 | CIKS | PSORS13TRAF3 interacting protein 26q21CV:PGCnp
DMG:Wockner_2014
256380SCML4dJ47M23.1sex comb on midleg-like 4 (Drosophila)6q21CV:GWASdb
CV:PGCnp
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
254228FAM26EC6orf188 | dJ493F7.3family with sequence similarity 26 member E6q22.1CV:GWASdb
CV:PGCnp
93663ARHGAP18MacGAP | SENEX | bA307O14.2Rho GTPase activating protein 186q22.33CV:PGCnp
PMID:cooccur
57224NHSL1C6orf63NHS like 16q23.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
4988OPRM1LMOR | M-OR-1 | MOP | MOR | MOR1 | OPRMopioid receptor, mu 16q24-q25ADT:Sun_2012
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
167838TXLNBC6orf198 | LST001 | MDP77 | dJ522B19.2taxilin beta6q24.1CV:PGCnp
340152ZC3H12DC6orf95 | MCPIP4 | TFL | dJ281H8.1 | p34zinc finger CCCH-type containing 12D6q25.1CV:PGCnp
DMG:Montano_2016
57480PLEKHG1ARHGEF41pleckstrin homology and RhoGEF domain containing G16q25.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8871SYNJ2INPP5Hsynaptojanin 26q25.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
10371SEMA3ACOLL1 | HH16 | Hsema-I | Hsema-III | SEMA1 | SEMAD | SEMAIII | SEMAL | SemD | coll-1semaphorin 3A7p12.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
27072VPS41HVPS41 | HVSP41 | hVps41pVPS41, HOPS complex subunit7p14-p13CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
79020C7orf25-chromosome 7 open reading frame 257p14.1CV:PGCnp
9844ELMO1CED-12 | CED12 | ELMO-1engulfment and cell motility 17p14.1CV:PGCnp
DEG:Maycox_2009
55033FKBP14EDSKMH | FKBP22 | IPBP12FK506 binding protein 147p14.3CV:PGCnp
1607DGKBDAGK2 | DGK | DGK-BETAdiacylglycerol kinase beta7p21.2CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
2115ETV1ER81ETS variant 17p21.3CV:PGCnp
25870SUMF2pFGEsulfatase modifying factor 27q11.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
80761UPK3BP35 | UP3B | UPIIIBuroplakin 3B7q11.2CV:PGCnp
DMG:Wockner_2014
55262C7orf43-chromosome 7 open reading frame 437q22.1DEG:Maycox_2009
245812CNPY4PRAT4Bcanopy FGF signaling regulator 47q22.1DMG:vanEijk_2014
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
222255ATXN7L1ATXN7L4ataxin 7 like 17q22.3CV:PGCnp
60412EXOC4SEC8 | SEC8L1 | Sec8pexocyst complex component 47q31CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
10157AASSLKR/SDH | LKRSDH | LORSDHaminoadipate-semialdehyde synthase7q31.3CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
142685ASB15-ankyrin repeat and SOCS box containing 157q31.31CV:PGCnp
51530ZC3HC1HSPC216 | NIPAzinc finger C3HC-type containing 17q32.2CV:GWASdb
CV:PGCnp
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
135932TMEM139-transmembrane protein 1397q34CV:PGCnp
135935NOBOXOG-2 | OG2 | OG2X | POF5 | TCAG_12042NOBOX oogenesis homeobox7q35CV:GWASdb
CV:PGCnp
155051CRYGN-crystallin gamma N7q36.1DMG:Wockner_2014
5327PLATT-PA | TPAplasminogen activator, tissue type8p12CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
Potential synaptic genes
157574FBXO16FBX16F-box protein 168p21.1CV:PGCnp
GSMA_IIA
GSMA_IIE
55756INTS9CPSF2L | INT9 | RC74integrator complex subunit 98p21.1CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
55893ZNF395HDBP-2 | HDBP2 | HDRF-2 | PBF | PRF-1 | PRF1 | Si-1-8-14zinc finger protein 3958p21.1CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Expression
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
286046XKR6C8orf21 | C8orf5 | C8orf7 | XRG6XK related 68p23.1CV:GWAScat
CV:PGCnp
DNM:Fromer_2014
CompositeSet
8989TRPA1ANKTM1 | FEPStransient receptor potential cation channel subfamily A member 18q13CV:GWASdb
CV:PGCnp
137872ADHFE1ADH8 | HMFT2263 | HOTalcohol dehydrogenase, iron containing 18q13.1CV:PGCnp
23213SULF1SULF-1sulfatase 18q13.2CV:PGCnp
DMG:Wockner_2014
23643LY96ESOP-1 | MD-2 | MD2 | ly-96lymphocyte antigen 968q21.11CV:PGCnp
DMG:vanEijk_2014
169166SNX31-sorting nexin 318q22.3CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
8928FOXH1FAST-1 | FAST1forkhead box H18q24.3CV:PGCnp
DMG:Jaffe_2016
7010TEKCD202B | TIE-2 | TIE2 | VMCM | VMCM1TEK receptor tyrosine kinase9p21CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
123PLIN2ADFP | ADRPperilipin 29p22.1CV:PGCnp
PMID:cooccur
256691MAMDC2-MAM domain containing 29q21.12CV:PGCnp
55035NOL8C9orf34 | NOP132 | bA62C3.3 | bA62C3.4nucleolar protein 89q22.31CV:PGCnp
6887TAL2-T-cell acute lymphocytic leukemia 29q32CV:PGCnp
7185TRAF1EBI6 | MGC:10353TNF receptor associated factor 19q33-q34CV:PGCnp
PMID:cooccur
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9536PTGESMGST-IV | MGST1-L1 | MGST1L1 | MPGES | PGES | PIG12 | PP102 | PP1294 | TP53I12 | mPGES-1prostaglandin E synthase9q34.3CV:GWASdb
CV:PGCnp
138162C9orf116PIERCE1 | RbEST47chromosome 9 open reading frame 1169q34.3CV:PGCnp
10013HDAC6CPBHM | HD6 | JM21 | PPP1R90histone deacetylase 6Xp11.23CV:PGCnp
DMG:vanEijk_2014
Chromatin Remodeling Genes
Potential synaptic genes
6102RP2DELXp11.3 | NM23-H10 | NME10 | TBCCD2 | XRP2retinitis pigmentosa 2 (X-linked recessive)Xp11.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
7076TIMP1CLGI | EPA | EPO | HCI | TIMP | TIMP-1TIMP metallopeptidase inhibitor 1Xp11.3-p11.23CV:PGCnp
PMID:cooccur
Potential synaptic genes
6990DYNLT3RP3 | TCTE1L | TCTEX1Ldynein light chain Tctex-type 3Xp21CV:PGCnp
DEG:Zhao_2015
Potential synaptic genes
23229ARHGEF9COLLYBISTIN | EIEE8 | HPEM-2 | PEM-2 | PEM2Cdc42 guanine nucleotide exchange factor 9Xq11.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
4674NAP1L2BPXnucleosome assembly protein 1 like 2Xq13DNM:Fromer_2014CompositeSet
1121CHMDXS540 | GGTA | HSD-32 | REP-1 | TCDCHM, Rab escort protein 1Xq21.2CV:PGCnp
PMID:cooccur
90843TCEAL8WEX3transcription elongation factor A like 8Xq22.1CV:GWASdb
CV:PGCnp
8450CUL4BCUL-4B | MRXHF2 | MRXS15 | MRXSC | SFM2cullin 4BXq23CV:PGCnp
PMID:cooccur
2892GRIA3GLUR-C | GLUR-K3 | GLUR3 | GLURC | GluA3 | MRX94glutamate ionotropic receptor AMPA type subunit 3Xq25Association
CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
159090FAM122BSPACIA2family with sequence similarity 122BXq26.3DMG:vanEijk_2014
6134RPL10AUTSX5 | DXS648 | DXS648E | L10 | NOV | QMribosomal protein L10Xq28CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
1774DNASE1L1DNAS1L1 | DNASEX | DNL1L | G4.8 | XIBdeoxyribonuclease I-like 1Xq28CV:PGCnp
PMID:cooccur
83692CD99L2CD99B | MIC2L1CD99 molecule like 2Xq28CV:PGCnp
DMG:vanEijk_2014