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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: TLX3

Summary

GeneID

30012

Symbol

TLX3

Synonyms

HOX11L2|MGC29804|RNX

Description

T-cell leukemia homeobox 3

Locus tag

Gene type

protein-coding

Map location

5q35.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.0276

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 4

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003700

transcription factor activity

IEA

GO:0005515

protein binding

IEA

GO:0043565

sequence-specific DNA binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007417

central nervous system development

IEA

Brain (GO term level: 6)

GO:0001764

neuron migration

IEA

neuron (GO term level: 8)

GO:0048665

neuron fate specification

IEA

neuron (GO term level: 10)

GO:0045665

negative regulation of neuron differentiation

IEA

neuron (GO term level: 10)

GO:0006355

regulation of transcription, DNA-dependent

IEA

GO:0007585

respiratory gaseous exchange

IEA

GO:0007275

multicellular organismal development

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-186	355	361	1A	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-191	483	489	m8	hsa-miR-191^brain	CAACGGAAUCCCAAAAGCAGCU
miR-369-3p	298	305	1A,m8	hsa-miR-369-3p	AAUAAUACAUGGUUGAUCUUU
miR-374	299	305	m8	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.