Search results: The pahtway p4235 has 341 genes in the original annotation. Currently, there are 243 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
256297PTF1APACA | PAGEN2 | PTF1-p48 | bHLHa29pancreas specific transcription factor, 1a10p12.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
338596ST8SIA6SIA8F | SIAT8F | ST8SIA-VIST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 610p12.33CV:PGCnp
1103CHATCHOACTASE | CMS1A | CMS1A2 | CMS6choline O-acetyltransferase10q11.2Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
3363HTR75-HT75-hydroxytryptamine receptor 710q21-q24ADT:Sun_2012
Association
CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
CompositeSet
50674NEUROG3Atoh5 | Math4B | NGN-3 | bHLHa7 | ngn3neurogenin 310q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
55118CRTAC1ASPIC | ASPIC1 | CEP-68cartilage acidic protein 110q22CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1592CYP26A1CP26 | CYP26 | P450RAI | P450RAI1cytochrome P450 family 26 subfamily A member 110q23-q24CV:PGCnp
GO_Annotation
PMID:cooccur
22986SORCS3SORCSsortilin related VPS10 domain containing receptor 310q23-q25CV:PGCnp
GO_Annotation
10660LBX1HPX-6 | HPX6 | LBX1H | homeoboxladybird homeobox 110q24CV:PGCnp
GO_Annotation
159296NKX2-3CSX3 | NK2.3 | NKX2.3 | NKX2C | NKX4-3NK2 homeobox 310q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
26507CNNM1ACDP1 | CLP-1cyclin and CBS domain divalent metal cation transport mediator 110q24.2CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
256536TCERG1L-transcription elongation regulator 1 like10q26.3CV:GWASdb
CV:PGCnp
GSMA_IIA
57084SLC17A6DNPI | VGLUT2solute carrier family 17 member 611p14.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
9152SLC6A5GLYT-2 | GLYT2 | HKPX3 | NET1solute carrier family 6 member 511p15.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
120237DBX1-developing brain homeobox 111p15.1CV:PGCnp
7262PHLDA2BRW1C | BWR1C | HLDA2 | IPL | TSSC3pleckstrin homology like domain family A member 211p15.4CV:PGCnp
DMG:Wockner_2014
887CCKBRCCK-B | CCK2R | GASRcholecystokinin B receptor11p15.4CV:GWASdb
CV:PGCnp
PMID:cooccur
3784KCNQ1ATFB1 | ATFB3 | JLNS1 | KCNA8 | KCNA9 | KVLQT1 | Kv1.9 | Kv7.1 | LQT | LQT1 | RWS | SQT2 | WRSpotassium voltage-gated channel subfamily Q member 111p15.5CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
PMID:cooccur
59307SIGIRRTIR8single immunoglobulin and toll-interleukin 1 receptor (TIR) domain11p15.5CV:PGCnp
DMG:vanEijk_2014
3481IGF2C11orf43 | GRDF | IGF-II | PP9974insulin like growth factor 211p15.5CV:PGCnp
PMID:cooccur
114900C1QTNF4CTRP4 | ZACRP4C1q and tumor necrosis factor related protein 411q11CV:PGCnp
DMG:Wockner_2014
Expression
6712SPTBN2GTRAP41 | SCA5 | SCAR14spectrin beta, non-erythrocytic 211q13CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5017OVOL1HOVO1ovo like zinc finger 111q13CV:PGCnp
DMG:Wockner_2014
91683SYT12SYT11 | sytXIIsynaptotagmin 1211q13.2CV:PGCnp
GO_Annotation
EXOCYTOSIS
2249FGF4HBGF-4 | HST | HST-1 | HSTF1 | K-FGF | KFGFfibroblast growth factor 411q13.3CV:PGCnp
DMG:Wockner_2014
5241PGRNR3C3 | PRprogesterone receptor11q22-q23CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7225TRPC6FSGS2 | TRP6transient receptor potential cation channel subfamily C member 611q22.1CV:PGCnp
PMID:cooccur
1813DRD2D2DR | D2Rdopamine receptor D211q23ADT:Sun_2012
Association
Core
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
GPCR SIGNALLING
Potential synaptic genes
57453DSCAML1DSCAM2Down syndrome cell adhesion molecule like 111q23CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
CompositeSet
Darnell FMRP targets
25833POU2F3Epoc-1 | OCT-11 | OCT11 | OTF-11 | PLA-1 | PLA1 | Skn-1aPOU class 2 homeobox 311q23.3CV:PGCnp
GSMA_I
6330SCN4BATFB17 | LQT10 | Navbeta4sodium voltage-gated channel beta subunit 411q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
EXCITABILITY
79864C11orf63-chromosome 11 open reading frame 6311q24.1CV:PGCnp
GSMA_I
2904GRIN2BEIEE27 | GluN2B | MRD6 | NMDAR2B | NR2B | hNR3glutamate ionotropic receptor NMDA type subunit 2B12p12ADT:Sun_2012
Association
Core
CV:GWASdb
CV:PGCnp
DNM:Awadalla_2010
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
440073IQSEC3-IQ motif and Sec7 domain 312p13.33CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7471WNT1BMND16 | INT1 | OI15wingless-type MMTV integration site family member 112q13CV:PGCnp
GO_Annotation
PMID:cooccur
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
3224HOXC8HOX3 | HOX3Ahomeobox C812q13.3GO_Annotation
PMID:cooccur
3225HOXC9HOX3 | HOX3Bhomeobox C912q13.3DMG:Jaffe_2016
3229HOXC13ECTD9 | HOX3 | HOX3Ghomeobox C1312q13.3CV:PGCnp
DMG:Jaffe_2016
8092ALX1CART1 | FND3 | HEL23ALX homeobox 112q21.31CV:PGCnp
DMG:Wockner_2014
GO_Annotation
64211LHX5-LIM homeobox 512q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
6926TBX3TBX3-ISO | UMS | XHLT-box 312q24.21CV:GWASdb
CV:PGCnp
2706GJB2CX26 | DFNA3 | DFNA3A | DFNB1 | DFNB1A | HID | KID | NSRD1 | PPKgap junction protein beta 213q11-q12CV:PGCnp
DMG:Wockner_2014
3651PDX1GSF | IDX-1 | IPF1 | IUF1 | MODY4 | PAGEN1 | PDX-1 | STF-1pancreatic and duodenal homeobox 113q12.1CV:PGCnp
PMID:cooccur
479ATP12A#945 | ATP1AL1 | HKATPase H+/K+ transporting non-gastric alpha2 subunit13q12.12|13q12.1-q12.3CV:GWASdb
CV:PGCnp
219409GSX1GSH1 | Gsh-1GS homeobox 113q12.2CV:PGCnp
PMID:cooccur
1045CDX2CDX-3 | CDX2/AS | CDX3caudal type homeobox 213q12.3DMG:Wockner_2014
2259FGF14FGF-14 | FHF-4 | FHF4 | SCA27fibroblast growth factor 1413q34Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
2290FOXG1BF1 | BF2 | FHKL3 | FKH2 | FKHL1 | FKHL2 | FKHL3 | FKHL4 | FOXG1A | FOXG1B | FOXG1C | HBF-1 | HBF-2 | HBF-3 | HBF-G2 | HBF2 | HFK1 | HFK2 | HFK3 | KHL2 | QINforkhead box G114q13DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
7080NKX2-1BCH | BHC | NK-2 | NKX2.1 | NKX2A | NMTC1 | T/EBP | TEBP | TITF1 | TTF-1 | TTF1NK2 homeobox 114q13GO_Annotation
PMID:cooccur
145581LRFN5C14orf146 | FIGLER8 | SALM5leucine rich repeat and fibronectin type III domain containing 514q21.1CV:PGCnp
PMID:cooccur
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
4990SIX6MCOPCT2 | ODRMD | OPTX2 | Six9SIX homeobox 614q23.1CV:PGCnp
DMG:Jaffe_2016
123099DEGS2C14orf66 | DES2 | FADS8delta(4)-desaturase, sphingolipid 214q32.2CV:PGCnp
PMID:cooccur
2558GABRA5-gamma-aminobutyric acid type A receptor alpha5 subunit15q12CNV:YES
CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
2567GABRG3-gamma-aminobutyric acid type A receptor gamma3 subunit15q12CNV:YES
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Potential synaptic genes
57369GJD2CX36 | GJA9gap junction protein delta 215q14CV:PGCnp
GO_Annotation
100131244ANKRD63-ankyrin repeat domain 6315q15.1CV:PGCnp
8854ALDH1A2RALDH(II) | RALDH2 | RALDH2-Taldehyde dehydrogenase 1 family member A215q21.3CV:PGCnp
GO_Annotation
PMID:cooccur
390598SKOR1CORL1 | FUSSEL15 | LBXCOR1SKI family transcriptional corepressor 115q23CV:PGCnp
DMG:Jaffe_2016
646BNC1BNC | BSN1 | HsT19447basonuclin 115q25.2CV:PGCnp
6340SCNN1GBESC3 | ENaCg | ENaCgamma | PHA1 | SCNEGsodium channel epithelial 1 gamma subunit16p12CV:PGCnp
GSMA_IIE
64711HS3ST63-OST-6 | HS3ST5heparan sulfate-glucosamine 3-sulfotransferase 616p13.3CV:PGCnp
1006CDH8Nbla04261cadherin 816q22.1CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
766CA7CAVIIcarbonic anhydrase VII16q22.1CV:PGCnp
DMG:Jaffe_2016
57687VAT1L-vesicle amine transport 1-like16q23.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
2300FOXL1FKH6 | FKHL11 | FREAC7forkhead box L116q24CV:GWASdb
CV:PGCnp
57338JPH3CAGL237 | HDL2 | JP-3 | JP3 | TNRC22junctophilin 316q24.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
388336SHISA6-shisa family member 617p12CV:PGCnp
1366CLDN7CEPTRL2 | CLDN-7 | CPETRL2 | Hs.84359 | claudin-1claudin 717p13.1CV:PGCnp
GO_Annotation
23108RAP1GAP2GARNL4 | RAP1GA3RAP1 GTPase activating protein 217p13.3CV:PGCnp
DMG:Montano_2016
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
84440RAB11FIP4RAB11-FIP4RAB11 family interacting protein 4 (class II)17q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
80725SRCIN1P140 | SNIPSRC kinase signaling inhibitor 117q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
124842TMEM132EDFNB99transmembrane protein 132E17q12CV:PGCnpAscano FMRP targets
342667STAC224b2 | 24b2/STAC2SH3 and cysteine rich domain 217q12CV:PGCnp
DNM:Ambalavanan_2016
DNM:Fromer_2014
DNM:Xu_2012
CompositeSet
4761NEUROD2NDRF | bHLHa1neuronal differentiation 217q12CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
1747DLX3AI4 | TDOdistal-less homeobox 317q21CV:PGCnp
DMG:Wockner_2014
10882C1QL1C1QRF | C1QTNF14 | CRFcomplement component 1, q subcomponent-like 117q21CV:GWASdb
CV:PGCnp
5697PYYPYY-I | PYY1peptide YY17q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3213HOXB3HOX2 | HOX2G | Hox-2.7homeobox B317q21.3CV:PGCnp
DMG:Wockner_2014
3218HOXB8HOX2 | HOX2D | Hox-2.4homeobox B817q21.3CV:PGCnp
DMG:Wockner_2014
3219HOXB9HOX-2.5 | HOX2 | HOX2Ehomeobox B917q21.3CV:PGCnp
DMG:Wockner_2014
Expression
1394CRHR1CRF-R | CRF-R-1 | CRF-R1 | CRF1 | CRFR-1 | CRFR1 | CRH-R-1 | CRH-R1 | CRHR | CRHR1Lcorticotropin releasing hormone receptor 117q21.31CV:PGCnp
PMID:cooccur
GPCR SIGNALLING
10642IGF2BP1CRD-BP | CRDBP | IMP-1 | IMP1 | VICKZ1 | ZBP1insulin like growth factor 2 mRNA binding protein 117q21.32CV:PGCnp
DMG:Jaffe_2016
3212HOXB2HOX2 | HOX2H | Hox-2.8 | K8homeobox B217q21.32CV:PGCnp
DMG:Wockner_2014
8631SKAP1HEL-S-81p | SCAP1 | SKAP55src kinase associated phosphoprotein 117q21.32CV:PGCnp
DMG:Wockner_2014
30009TBX21T-PET | T-bet | TBET | TBLYMT-box 2117q21.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7484WNT9BWNT14B | WNT15wingless-type MMTV integration site family member 9B17q21.32CV:PGCnp
56934CA10CA-RPX | CARPX | HUCEP-15carbonic anhydrase X17q21.33CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
326624RAB37-RAB37, member RAS oncogene family17q25.1CV:PheWAS
DMG:Wockner_2014
G2Cdb.humanNRC
G2Cdb.humanPSP
3993LLGL2HGL | Hugl-2 | LGL2lethal giant larvae homolog 2, scribble cell polarity complex component17q25.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
146713RBFOX3FOX-3 | FOX3 | HRNBP3 | NEUNRNA binding protein, fox-1 homolog (C. elegans) 317q25.3CV:PGCnp
DMG:Jaffe_2016
81035COLEC12CLP1 | NSR2 | SCARA4 | SRCLcollectin subfamily member 1218p11.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8792TNFRSF11ACD265 | FEO | LOH18CR1 | ODFR | OFE | OPTB7 | OSTS | PDB2 | RANK | TRANCERtumor necrosis factor receptor superfamily member 11a18q22.1CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
53637S1PR5EDG8 | Edg-8 | S1P5 | SPPR-1 | SPPR-2sphingosine-1-phosphate receptor 519p13.2CV:PGCnp
DMG:vanEijk_2014
390874ONECUT3OC3one cut homeobox 319p13.3CV:PGCnp
610HCN2BCNG-2 | BCNG2 | HAC-1hyperpolarization activated cyclic nucleotide gated potassium channel 219p13.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9745ZNF536-zinc finger protein 53619q12CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
29785CYP2S1CYPIIS1cytochrome P450 family 2 subfamily S member 119q13.1CV:PGCnp
DMG:Wockner_2014
Expression
51599LSRILDR3 | LISCH7lipolysis stimulated lipoprotein receptor19q13.12CV:GWASdb
CV:PGCnp
PMID:cooccur
3743KCNA7HAK6 | KV1.7potassium voltage-gated channel subfamily A member 719q13.3CV:PGCnp
4861NPAS1MOP5 | PASD5 | bHLHe11neuronal PAS domain protein 119q13.32CV:PGCnp
GO_Annotation
PMID:cooccur
257ALX3FND | FND1ALX homeobox 31p13.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
388662SLC6A17MRT48 | NTT4solute carrier family 6 member 171p13.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GO_Annotation
GSMA_I
NEUROTRANSMITTER METABOLISM
CompositeSet
Darnell FMRP targets
2672GFI1GFI-1 | GFI1A | SCN2 | ZNF163growth factor independent 1 transcription repressor1p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
431707LHX8LHX7LIM homeobox 81p31.1CV:PGCnp
GSMA_IIA
PMID:cooccur
27022FOXD3AIS1 | Genesis | HFH2 | VAMAS2forkhead box D31p31.3GSMA_IIA
PMID:cooccur
127343DMBX1MBX | OTX3 | PAXBdiencephalon/mesencephalon homeobox 11p33CV:PGCnp
GO_Annotation
3061HCRTR1OX1Rhypocretin receptor 11p33CV:PGCnp
GO_Annotation
PMID:cooccur
51440HPCAL4HLP4hippocalcin like 41p34.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
284654RSPO1CRISTIN3 | RSPOR-spondin 11p34.3CV:PGCnp
DMG:Jaffe_2016
2899GRIK3EAA5 | GLR7 | GLUR7 | GluK3 | GluR7aglutamate ionotropic receptor kainate type subunit 31p34.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
LIGAND GATED ION SIGNALING
CompositeSet
Darnell FMRP targets
Potential synaptic genes
347735SERINC2FKSG84 | PRO0899 | TDE2 | TDE2Lserine incorporator 21p35.1CV:PGCnp
DMG:Wockner_2014
4985OPRD1OPRDopioid receptor, delta 11p36.1-p34.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
79727LIN28ACSDD1 | LIN-28 | LIN28 | ZCCHC1 | lin-28Alin-28 homolog A1p36.11CV:GWASdb
CV:PGCnp
84966IGSF21-immunoglobin superfamily member 211p36.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
5081PAX7HUP1 | PAX7B | RMS2paired box 71p36.13CV:PGCnp
DMG:Wockner_2014
54361WNT4SERKAL | WNT-4wingless-type MMTV integration site family member 41p36.23-p35.1CV:PGCnp
7161TP73P73tumor protein p731p36.3CV:PGCnp
DMG:Wockner_2014
54626HES2bHLHb40hes family bHLH transcription factor 21p36.31CV:PGCnp
DMG:Wockner_2014
63976PRDM16CMD1LL | LVNC8 | MEL1 | PFM13PR domain 161p36.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
5590PRKCZPKC-ZETA | PKC2protein kinase C zeta1p36.33-p36.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
INTRACELLULAR SIGNAL TRANSDUCTION
6258RXRGNR2B3 | RXRCretinoid X receptor gamma1q22-q23CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
4009LMX1ALMX1 | LMX1.1LIM homeobox transcription factor 1 alpha1q24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
127833SYT2CMS7 | MYSPC | SytIIsynaptotagmin 21q32.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
3756KCNH1EAG | EAG1 | Kv10.1 | TMBTS | ZLS1 | h-eag | hEAG1potassium voltage-gated channel subfamily H member 11q32.2CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
89780WNT3A-wingless-type MMTV integration site family member 3A1q42CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
79605PGBD5-piggyBac transposable element derived 51q42.13CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
6262RYR2ARVC2 | ARVD2 | RYR-2 | RyR | VTSIPryanodine receptor 21q43CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
128674PROKR2GPR73L1 | GPR73b | GPRg2 | HH3 | KAL3 | PKR2 | dJ680N4.3prokineticin receptor 220p12.3CV:PGCnp
DMG:Wockner_2014
6939TCF15EC2 | PARAXIS | bHLHa40transcription factor 15 (basic helix-loop-helix)20p13CV:GWAScat
CV:GWASdb
CV:PGCnp
3055HCKJTK9 | p59Hck | p61HckHCK proto-oncogene, Src family tyrosine kinase20q11-q12CV:PGCnp
Network
CompositeSet
128434VSTM2LC20orf102 | dJ1118M15.2V-set and transmembrane domain containing 2 like20q11.23CV:PGCnp
DMG:Wockner_2014
11122PTPRTRPTPrhoprotein tyrosine phosphatase, receptor type T20q12-q13CV:PGCnpCompositeSet
Darnell FMRP targets
140689CBLN4CBLNL1cerebellin 4 precursor20q13CV:PGCnp
DMG:Nishioka_2013
57468SLC12A5EIEE34 | EIG14 | KCC2 | hKCC2solute carrier family 12 member 520q13.12CV:PGCnp
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7022TFAP2CAP2-GAMMA | ERF1 | TFAP2G | hAP-2gtranscription factor AP-2 gamma (activating enhancer binding protein 2 gamma)20q13.2CV:PGCnp
DMG:Wockner_2014
4773NFATC2NFAT1 | NFATPnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 220q13.2CV:GWASdb
CV:PGCnp
Network
3785KCNQ2BFNC | BFNS1 | EBN | EBN1 | EIEE7 | ENB1 | HNSPC | KCNA11 | KV7.2 | KVEBN1potassium voltage-gated channel subfamily Q member 220q13.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
11255HRH3GPCR97 | HH3Rhistamine receptor H320q13.33CV:PGCnp
GO_Annotation
PMID:cooccur
140628GATA5GATAS | bB379O24.1GATA binding protein 520q13.33CV:PGCnp
DMG:Wockner_2014
1137CHRNA4BFNC | EBN | EBN1 | NACHR | NACHRA4 | NACRA4cholinergic receptor nicotinic alpha 4 subunit20q13.33CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
54101RIPK4ANKK2 | ANKRD3 | DIK | NKRD3 | PKK | PPS2 | RIP4receptor interacting serine/threonine kinase 421q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
65078RTN4RNGR | NOGORreticulon 4 receptor22q11.21Association
CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
4744NEFHNFHneurofilament, heavy polypeptide22q12.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
8484GALR3-galanin receptor 322q13.1GO_Annotation
PMID:cooccur
23467NPTXRNPRneuronal pentraxin receptor22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Potential synaptic genes
25830SULT4A1BR-STL-1 | BRSTL1 | DJ388M5.3 | NST | SULTX3 | hBR-STL-1sulfotransferase family 4A member 122q13.2Association
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
9620CELSR1ADGRC1 | CDHF9 | FMI2 | HFMI2 | ME2cadherin EGF LAG seven-pass G-type receptor 122q13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Ascano FMRP targets
758MPPED1239AB | C22orf1 | FAM1Ametallophosphoesterase domain containing 122q13.31CV:PGCnp
2016EMX1-empty spiracles homeobox 12p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
53335BCL11ABCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856B-cell CLL/lymphoma 11A2p16.1CV:GWASdb
CV:PGCnp
PMID:cooccur
3777KCNK3K2p3.1 | OAT1 | PPH4 | TASK | TASK-1 | TBAK1potassium two pore domain channel subfamily K member 32p23CV:GWASdb
CV:PGCnp
GO_Annotation
238ALKCD246 | NBLST3anaplastic lymphoma receptor tyrosine kinase2p23Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
7349UCNUI | UROCurocortin2p23.3DMG:Wockner_2014
GO_Annotation
PMID:cooccur
7781SLC30A3ZNT3solute carrier family 30 member 32p23.3CV:PGCnp
DEG:Maycox_2009
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.humanPSD
G2Cdb.humanPSP
3790KCNS3KV9.3potassium voltage-gated channel modifier subfamily S member 32p24CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
PMID:cooccur
4862NPAS2MOP4 | PASD4 | bHLHe9neuronal PAS domain protein 22q11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
6549SLC9A2NHE2solute carrier family 9 member A22q11.2CV:PGCnp
GSMA_I
57628DPP10DPL2 | DPPY | DPRP-3 | DPRP3dipeptidyl peptidase like 102q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
11249NXPH2NPH2neurexophilin 22q22.1CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
GSMA_IIA
114805GALNT13GalNAc-T13polypeptide N-acetylgalactosaminyltransferase 132q24.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
344191EVX2EVX-2even-skipped homeobox 22q31.1CV:PGCnp
DMG:Jaffe_2016
3235HOXD9HOX4 | HOX4C | Hox-4.3 | Hox-5.2homeobox D92q31.1CV:PGCnp
DMG:Jaffe_2016
3236HOXD10HOX4 | HOX4D | HOX4E | Hox-4.4homeobox D102q31.1CV:PGCnp
3237HOXD11HOX4 | HOX4Fhomeobox D112q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3549IHHBDA1 | HHG2indian hedgehog2q33-q35CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
5077PAX3CDHS | HUP2 | WS1 | WS3paired box 32q35CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
54738FEVHSRNAFEV | PET-1FEV, ETS transcription factor2q36GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
9427ECEL1DA5D | DINE | ECEX | XCEendothelin converting enzyme-like 12q37.1CV:PGCnp
GO_Annotation
93010B3GNT7beta3GnT7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 72q37.1|2q37.1CV:PGCnp
DMG:Montano_2016
Expression
PMID:cooccur
60675PROK2BV8 | HH4 | KAL4 | MIT1 | PK2prokineticin 23p13CV:PGCnp
Expression
GO_Annotation
GSMA_IIA
GSMA_IIE
317649EIF4E3eIF-4E3 | eIF4E-3eukaryotic translation initiation factor 4E family member 33p14CV:PGCnp
GSMA_IIA
GSMA_IIE
55079FEZF2FEZ | FEZL | FKSG36 | TOF | ZFP312 | ZNF312FEZ family zinc finger 23p14.2CV:PGCnp
GO_Annotation
PMID:cooccur
6331SCN5ACDCD2 | CMD1E | CMPD2 | HB1 | HB2 | HBBD | HH1 | ICCD | IVF | LQT3 | Nav1.5 | PFHB1 | SSS1 | VF1sodium voltage-gated channel alpha subunit 53p21CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
EXCITABILITY
2850GPR27SREB1G protein-coupled receptor 273p21-p14CV:PGCnp
GSMA_IIA
GSMA_IIE
9254CACNA2D2CACNA2Dcalcium voltage-gated channel auxiliary subunit alpha2delta 23p21.3CV:PGCnp
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
54716SLC6A20SIT1 | XT3 | Xtrp3solute carrier family 6 member 203p21.3CV:PGCnp
GO_Annotation
PMID:cooccur
7433VIPR1HVR1 | II | PACAP-R-2 | PACAP-R2 | RDC1 | V1RG | VAPC1 | VIP-R-1 | VIPR | VIRG | VPAC1 | VPAC1R | VPCAP1Rvasoactive intestinal peptide receptor 13p22CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
GO_Annotation
Network
5745PTH1RPFE | PTHR | PTHR1parathyroid hormone 1 receptor3p22-p21.1CV:PGCnp
DMG:Wockner_2014
Network
491ATP2B2PMCA2 | PMCA2a | PMCA2iATPase plasma membrane Ca2+ transporting 23p25.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2917GRM7GLUR7 | GPRC1G | MGLU7 | MGLUR7 | PPP1R87glutamate receptor, metabotropic 73p26.1-p25.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
64084CLSTN2ALC-GAMMA | CDHR13 | CS2 | CSTN2 | alcagammacalsyntenin 23q23CV:GWASdb
CV:PGCnp
GO_Annotation
57709SLC7A14PPP1R142solute carrier family 7 member 143q26.2CV:GWAScat
CV:GWASdb
CV:PGCnp
2693GHSRGHDPgrowth hormone secretagogue receptor3q26.31CV:PGCnp
GO_Annotation
PMID:cooccur
386617KCTD8-potassium channel tetramerization domain containing 84p13CV:PGCnp
PMID:cooccur
CompositeSet
9353SLIT2SLIL3 | Slit-2slit guidance ligand 24p15.2CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
Ascano FMRP targets
Potential synaptic genes
152ADRA2CADRA2L2 | ADRA2RL2 | ADRARL2 | ALPHA2CARadrenoceptor alpha 2C4p16ADT:Sun_2012
CV:PGCnp
PMID:cooccur
5522PPP2R2CB55-GAMMA | IMYPNO | IMYPNO1 | PR52 | PR55Gprotein phosphatase 2 regulatory subunit B, gamma4p16.1CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
8532CPZ-carboxypeptidase Z4p16.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10815CPLX1CPX-I | CPX1complexin 14p16.3CV:PGCnp
GO_Annotation
PMID:cooccur
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
170825GSX2GSH2GS homeobox 24q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
8987STBD1GENEX3414 | GENX-3414starch binding domain 14q21.1CV:PGCnp
4825NKX6-1NKX6.1 | NKX6ANK6 homeobox 14q21.33CV:PGCnp
GO_Annotation
PMID:cooccur
9227LRATLCA14lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)4q32.1CV:PGCnp
CV:PheWAS
348980HCN1BCNG-1 | BCNG1 | EIEE24 | HAC-2hyperpolarization activated cyclic nucleotide gated potassium channel 15p12CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
4883NPR3ANP-C | ANPR-C | ANPRC | C5orf23 | GUCY2B | NPR-C | NPRCnatriuretic peptide receptor 35p13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
6531SLC6A3DAT | DAT1 | PKDYSsolute carrier family 6 member 35p15.3ADT:Sun_2012
Association
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
3350HTR1A5-HT-1A | 5-HT1A | 5HT1a | ADRB2RL1 | ADRBRL1 | G-21 | PFMCD5-hydroxytryptamine receptor 1A5q12.3ADT:Sun_2012
Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
SEROTONIN
9607CARTPTCARTCART prepropeptide5q13.2CV:PGCnp
GO_Annotation
PMID:cooccur
23440OTP-orthopedia homeobox5q13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
353189SLCO4C1OATP-H | OATP-M1 | OATP4C1 | OATPX | PRO2176 | SLC21A20solute carrier organic anion transporter family member 4C15q21.2CV:GWASdb
CV:PGCnp
LK:YES
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
23105FSTL4-follistatin like 45q31.1CV:GWASdb
CV:PGCnp
GSMA_I
5459POU4F3BRN3C | DFNA15POU class 4 homeobox 35q32CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
345630FBLL1-fibrillarin-like 15q34CV:PGCnp
GSMA_IIA
30012TLX3HOX11L2 | RNXT-cell leukemia homeobox 35q35.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
255426RASGEF1C-RasGEF domain family member 1C5q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
7021TFAP2BAP-2B | AP2-Btranscription factor AP-2 beta (activating enhancer binding protein 2 beta)6p12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
83741TFAP2DTFAP2BL1transcription factor AP-2 delta (activating enhancer binding protein 2 delta)6p12.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIE
CompositeSet
654BMP6VGR | VGR1bone morphogenetic protein 66p24-p23CV:PGCnp
GSMA_I
PMID:cooccur
6492SIM1bHLHe14single-minded family bHLH transcription factor 16q16.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
245806VGLL2VGL2 | VITO1vestigial like family member 26q22.1CV:PGCnp
DMG:Wockner_2014
6581SLC22A3EMT | EMTH | OCT3solute carrier family 22 member 36q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
23242COBL-cordon-bleu WH2 repeat protein7p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10320IKZF1Hs.54452 | IK1 | IKAROS | LYF1 | LyF-1 | PPP1R92 | PRO0758 | ZNFN1A1IKAROS family zinc finger 17p12.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GO_Annotation
23072HECW1NEDL1HECT, C2 and WW domain containing E3 ubiquitin protein ligase 17p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
3205HOXA9ABD-B | HOX1 | HOX1.7 | HOX1Ghomeobox A97p15.2DMG:Wockner_2014
3209HOXA13HOX1 | HOX1Jhomeobox A137p15.2CV:PGCnp
DMG:Wockner_2014
2128EVX1EVX-1even-skipped homeobox 17p15.2CV:PGCnp
221833SP8BTDSp8 transcription factor7p21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
340260UNCXUNCX4.1UNC homeobox7p22.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
2861GPR37EDNRBL | PAELR | hET(B)R-LPG protein-coupled receptor 377q31CV:PGCnp
DMG:Jaffe_2016
3663IRF5SLEB10interferon regulatory factor 57q32CV:PGCnp
PMID:cooccur
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
80223RAB11FIP1NOEL1A | RCP | rab11-FIP1RAB11 family interacting protein 1 (class I)8p11.22CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9228DLGAP2DAP2 | SAPAP2discs large homolog associated protein 28p23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
83648FAM167AC8orf13 | D8S265family with sequence similarity 167 member A8p23-p22CV:PGCnp
5179PENKPE | PENK-Aproenkephalin8q12.1CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
9242MSCABF-1 | ABF1 | MYOR | bHLHa22musculin8q21CV:PGCnp
PMID:cooccur
11075STMN2SCG10 | SCGN10stathmin 28q21.13CV:GWASdb
CV:PGCnp
GO_Annotation
7373COL14A1UNDcollagen type XIV alpha 18q23CV:PGCnp
DMG:Jaffe_2016
83482SCRT1SCRT | ZNF898scratch family zinc finger 18q24.3CV:PGCnp
DMG:Wockner_2014
4062LY6HNMLY6lymphocyte antigen 6 complex, locus H8q24.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
54796BNC2BSN2basonuclin 29p22.2CV:PGCnp
81704DOCK8HEL-205 | MRD2 | ZIR8dedicator of cytokinesis 89p24.3CV:PGCnp
1761DMRT1CT154 | DMT1doublesex and mab-3 related transcription factor 19p24.3CV:PGCnp
PMID:cooccur
1306COL15A1-collagen type XV alpha 19q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
5069PAPPAASBABP2 | DIPLA1 | IGFBP-4ase | PAPA | PAPP-A | PAPPA1pregnancy-associated plasma protein A, pappalysin 19q33.2CV:GWASdb
CV:PGCnp
84929FIBCD1-fibrinogen C domain containing 19q34.12CV:GWASdb
CV:PGCnp
GO_Annotation
2902GRIN1GluN1 | MRD8 | NMD-R1 | NMDA1 | NMDAR1 | NR1glutamate ionotropic receptor NMDA type subunit 19q34.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
389813C9orf172-chromosome 9 open reading frame 1729q34.3DMG:Wockner_2014
DNM:Guipponi_2014
CompositeSet