Search results: The pahtway p1959 has 88 genes in the original annotation. Currently, there are 58 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3688ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin subunit beta 110p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
Network
3416IDEINSULYSINinsulin degrading enzyme10q23-q25CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
6288SAA1PIG4 | SAA | SAA2 | TP53I4serum amyloid A111p15.1CV:GWASdb
CV:PGCnp
10410IFITM31-8U | DSPA2b | IP15interferon induced transmembrane protein 311p15.5CV:PGCnp
DEG:Sanders_2013
Expression
PMID:cooccur
9610RIN1-Ras and Rab interactor 111q13.2CV:PGCnp
4322MMP13CLG3 | MANDP1 | MMP-13matrix metallopeptidase 1311q22.3CV:GWASdb
CV:PGCnp
834CASP1ICE | IL1BC | P45caspase 111q23DEG:Sanders_2013
GSMA_I
Network
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
8082SSPNDAGA5 | KRAG | NSPN | SPN1 | SPN2sarcospan12p11.2CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
3678ITGA5CD49e | FNRA | VLA-5 | VLA5Aintegrin subunit alpha 512q13.13DMG:vanEijk_2014
GO_Annotation
Network
Ascano FMRP targets
51228GLTP-glycolipid transfer protein12q24.11CV:PGCnp
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
2562GABRB3ECA5gamma-aminobutyric acid type A receptor beta3 subunit15q12CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
29108PYCARDASC | CARD5 | TMS | TMS-1 | TMS1PYD and CARD domain containing16p11.2CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
CompositeSet
8651SOCS1CIS1 | CISH1 | JAB | SOCS-1 | SSI-1 | SSI1 | TIP3suppressor of cytokine signaling 116p13.13CV:PGCnp
DMG:Nishioka_2013
51330TNFRSF12ACD266 | FN14 | TWEAKRtumor necrosis factor receptor superfamily member 12A16p13.3DMG:Wockner_2014
GO_Annotation
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
4489MT1AMT1 | MT1S | MTCmetallothionein 1A16q13CV:PGCnp
DMG:Wockner_2014
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
642BLMHBH | BMHbleomycin hydrolase17q11.2CV:PGCnp
6774STAT3ADMIO | APRF | HIESsignal transducer and activator of transcription 3 (acute-phase response factor)17q21.31CV:PGCnp
CV:PheWAS
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
114876OSBPL1AORP-1 | ORP1 | OSBPL1Boxysterol binding protein like 1A18q11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5589PRKCSHAGE-R2 | G19P1 | GIIB | PCLD | PKCSH | PLD1 | VASAP-60protein kinase C substrate 80K-H19p13.2CV:PGCnp
DMG:Nishioka_2013
3726JUNBAP-1jun B proto-oncogene19p13.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7064THOP1EP24.15 | MEPD_HUMAN | MP78 | TOPthimet oligopeptidase 119p13.3CV:PGCnp
DMG:Wockner_2014
4616GADD45BGADD45BETA | MYD118growth arrest and DNA damage inducible beta19p13.3CV:PGCnp
PMID:cooccur
344APOC2APO-CII | APOC-IIapolipoprotein C-II19q13.2CV:PGCnp
389RHOCARH9 | ARHC | H9 | RHOH9ras homolog family member C1p13.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8915BCL10CARMEN | CIPER | CLAP | IMD37 | c-E10 | mE10B-cell CLL/lymphoma 101p22CV:PGCnp
GO_Annotation
2023ENO1ENO1L1 | HEL-S-17 | MPB1 | NNE | PPHenolase 1, (alpha)1p36.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6277S100A62A9 | 5B10 | CABP | CACY | PRAS100 calcium binding protein A61q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
4318MMP9CLG4B | GELB | MANDP2 | MMP-9matrix metallopeptidase 920q13.12CV:PGCnp
PMID:cooccur
1827RCAN1ADAPT78 | CSP1 | DSC1 | DSCR1 | MCIP1 | RCN1regulator of calcineurin 121q22.12CV:PGCnp
GO_Annotation
PMID:cooccur
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
4282MIFGIF | GLIF | MMIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)22q11.23DNM:Fromer_2014
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3162HMOX1HMOX1D | HO-1 | HSP32 | bK286B10heme oxygenase 122q13.1CV:PGCnp
PMID:cooccur
3557IL1RNDIRA | ICIL-1RA | IL-1RN | IL-1ra | IL-1ra3 | IL1F3 | IL1RA | IRAP | MVCD4interleukin 1 receptor antagonist2q14.2Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
5937RBMS1C2orf12 | HCC-4 | MSSP | MSSP-1 | MSSP-2 | MSSP-3 | SCR2 | YC1RNA binding motif, single stranded interacting protein 12q24.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
841CASP8ALPS2B | CAP4 | Casp-8 | FLICE | MACH | MCH5caspase 82q33-q34CV:GWASdb
CV:PGCnp
9039UBA3NAE2 | UBE1C | hUBA3ubiquitin like modifier activating enzyme 33p14.1CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
10425ARIH2ARI2 | TRIAD1ariadne RBR E3 ubiquitin protein ligase 23p21CV:PGCnp
Network
1294COL7A1EBD1 | EBDCT | EBR1 | NDNC8collagen type VII alpha 13p21.1CV:PGCnp
84708LNX1LNX | MPDZ | PDZRN2ligand of numb-protein X 1, E3 ubiquitin protein ligase4q12CV:PGCnp
DMG:Wockner_2014
4086SMAD1BSP-1 | BSP1 | JV4-1 | JV41 | MADH1 | MADR1SMAD family member 14q31CV:PGCnp
GO_Annotation
324APCBTPS2 | DP2 | DP2.5 | DP3 | GS | PPP1R46adenomatous polyposis coli5q21-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
3119HLA-DQB1CELIAC1 | HLA-DQB | IDDM1major histocompatibility complex, class II, DQ beta 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
6648SOD2IPOB | MNSOD | MVCD6superoxide dismutase 2, mitochondrial6q25.3Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
5340PLG-plasminogen6q26CV:PGCnp
GO_Annotation
Network
PMID:cooccur
7058THBS2TSP2thrombospondin 26q27CV:PGCnp
DMG:Wockner_2014
Expression
Potential synaptic genes
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
3309HSPA5BIP | GRP78 | HEL-S-89n | MIF2heat shock protein family A (Hsp70) member 59q33.3CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
4128MAOAMAO-Amonoamine oxidase AXp11.3Association
CV:PGCnp
GO_Annotation
GR_Ng
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet