Gene Page

Home
Datasets
Search
Analysis & Tools
Documents
About SZGR
Quick search: (e.g. 207 or AKT)

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

Release Site Map Support Contact us

Gene Page: PPP2CA

Summary

GeneID

5515

Symbol

PPP2CA

Synonyms

PP2Ac|PP2CA|RP-C

Description

protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform

Locus tag

Gene type

protein-coding

Map location

5q31.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.0032

Network

Shortest path distance of core genes in the Human protein-protein interaction network

Contribution to shortest path in PPI network: 6.9342

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

CHPT1

0.80

0.78

GYG1

0.77

0.71

SRI

0.76

0.69

TMEM22

0.76

0.66

NUDT6

0.75

0.67

GBAS

0.75

0.69

RAB9A

0.74

0.66

IL17RB

0.74

0.52

HMGCL

0.74

0.66

CYB5R1

0.73

0.64

Top 10 negatively co-expressed genes

ZNF783

-0.43

-0.44

JAG2

-0.43

AD000671.1

-0.43

-0.44

TNKS1BP1

-0.43

-0.44

UPF3A

-0.42

-0.47

BAHCC1

-0.42

-0.43

AC010536.2

-0.42

-0.43

HIC2

-0.42

-0.41

FBN3

-0.42

-0.41

SLC26A1

-0.42

-0.46

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005506

iron ion binding

IEA

GO:0005515

protein binding

IEA

GO:0005515

protein binding

IPI

9847399

GO:0004721

phosphoprotein phosphatase activity

IEA

GO:0016787

hydrolase activity

IEA

GO:0030145

manganese ion binding

IEA

GO:0046872

metal ion binding

IEA

GO:0046982

protein heterodimerization activity

IPI

9847399

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000188

inactivation of MAPK activity

NAS

11007961

GO:0008380

RNA splicing

NAS

11007961

GO:0006470

protein amino acid dephosphorylation

TAS

2849764 |11007961

GO:0010033

response to organic substance

NAS

11007961

GO:0006275

regulation of DNA replication

NAS

11007961

GO:0006917

induction of apoptosis

TAS

11007961

GO:0006672

ceramide metabolic process

NAS

11007961

GO:0030111

regulation of Wnt receptor signaling pathway

NAS

11007961

GO:0007498

mesoderm development

IEA

GO:0030155

regulation of cell adhesion

NAS

11007961

GO:0042518

negative regulation of tyrosine phosphorylation of Stat3 protein

NAS

11007961

GO:0040008

regulation of growth

NAS

11360189

GO:0019932

second-messenger-mediated signaling

NAS

11007961

GO:0030308

negative regulation of cell growth

NAS

11007961

GO:0045595

regulation of cell differentiation

NAS

11360189

GO:0045449

regulation of transcription

NAS

11007961

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000159

protein phosphatase type 2A complex

TAS

11007961

GO:0005829

cytosol

IEA

GO:0005829

cytosol

TAS

11007961

GO:0005625

soluble fraction

NAS

11007961

GO:0005634

nucleus

NAS

11007961

GO:0005737

cytoplasm

IEA

GO:0005739

mitochondrion

NAS

11007961

GO:0005886

plasma membrane

IEA

GO:0015630

microtubule cytoskeleton

NAS

11007961

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ARL2	ARFL2	ADP-ribosylation factor-like 2	Co-purification	BioGRID	12912990
BCL2	Bcl-2	B-cell CLL/lymphoma 2	-	HPRD,BioGRID	9852076
BEST1	ARB \| BEST \| BMD \| TU15B \| VMD2	bestrophin 1	Affinity Capture-Western Reconstituted Complex	BioGRID	12058047
CCNG2	-	cyclin G2	Affinity Capture-Western Reconstituted Complex	BioGRID	11956189
CCT2	99D8.1 \| CCT-beta \| CCTB \| MGC142074 \| MGC142076 \| PRO1633 \| TCP-1-beta	chaperonin containing TCP1, subunit 2 (beta)	Affinity Capture-MS	BioGRID	18782753
CCT3	CCT-gamma \| CCTG \| PIG48 \| TCP-1-gamma \| TRIC5	chaperonin containing TCP1, subunit 3 (gamma)	Affinity Capture-MS	BioGRID	18782753
CCT4	CCT-DELTA \| Cctd \| MGC126164 \| MGC126165 \| SRB	chaperonin containing TCP1, subunit 4 (delta)	Affinity Capture-MS	BioGRID	18782753
CCT5	CCT-epsilon \| CCTE \| KIAA0098 \| TCP-1-epsilon	chaperonin containing TCP1, subunit 5 (epsilon)	Affinity Capture-MS	BioGRID	18782753
CCT6A	CCT-zeta \| CCT-zeta-1 \| CCT6 \| Cctz \| HTR3 \| MGC126214 \| MGC126215 \| MoDP-2 \| TCP-1-zeta \| TCP20 \| TCPZ \| TTCP20	chaperonin containing TCP1, subunit 6A (zeta 1)	Affinity Capture-MS	BioGRID	18782753
CCT7	CCT-ETA \| Ccth \| MGC110985 \| Nip7-1 \| TCP-1-eta	chaperonin containing TCP1, subunit 7 (eta)	Affinity Capture-MS	BioGRID	18782753
CCT8	C21orf112 \| Cctq \| D21S246 \| KIAA0002 \| PRED71	chaperonin containing TCP1, subunit 8 (theta)	Affinity Capture-MS	BioGRID	18782753
CDC5L	CEF1 \| KIAA0432 \| PCDC5RP \| dJ319D22.1 \| hCDC5	CDC5 cell division cycle 5-like (S. pombe)	in vitro in vivo Two-hybrid	BioGRID	10827081
CDK2	p33(CDK2)	cyclin-dependent kinase 2	Biochemical Activity Co-purification	BioGRID	10934208
CDK6	MGC59692 \| PLSTIRE \| STQTL11	cyclin-dependent kinase 6	Biochemical Activity Co-purification	BioGRID	10934208
CSNK1A1	CK1 \| HLCDGP1 \| PRO2975	casein kinase 1, alpha 1	Affinity Capture-MS	BioGRID	12062430
CTTNBP2	C7orf8 \| CORTBP2 \| FLJ34229 \| KIAA1758 \| MGC104579 \| Orf4	cortactin binding protein 2	Affinity Capture-MS	BioGRID	18782753
CTTNBP2NL	DKFZp547A023 \| FLJ13278	CTTNBP2 N-terminal like	Affinity Capture-MS	BioGRID	18782753
ETF1	D5S1995 \| ERF \| ERF1 \| MGC111066 \| RF1 \| SUP45L1 \| TB3-1	eukaryotic translation termination factor 1	Affinity Capture-Western Co-purification Two-hybrid	BioGRID	9003791
FAM40A	FLJ14743 \| KIAA1761 \| MGC148091 \| RP4-773N10.1	family with sequence similarity 40, member A	Affinity Capture-MS	BioGRID	18782753
FGFR1OP	FOP	FGFR1 oncogene partner	Affinity Capture-MS	BioGRID	18782753
IGBP1	ALPHA-4 \| IBP1	immunoglobulin (CD79A) binding protein 1	Affinity Capture-MS in vivo Two-hybrid	BioGRID	9647778 \|10441131 \|16085932 \|18782753
IGBP1	ALPHA-4 \| IBP1	immunoglobulin (CD79A) binding protein 1	-	HPRD	9647778 \|10441131 \|11371618
ISYNA1	INOS \| IPS \| Ino1	inositol-3-phosphate synthase 1	Two-hybrid	BioGRID	16169070
MOBKL3	2C4D \| CGI-95 \| MGC12264 \| MOB1 \| MOB3 \| PREI3	MOB1, Mps One Binder kinase activator-like 3 (yeast)	Affinity Capture-MS	BioGRID	18782753
MRPS26	C20orf193 \| GI008 \| MRP-S13 \| MRP-S26 \| MRPS13 \| NY-BR-87 \| RPMS13 \| dJ534B8.3	mitochondrial ribosomal protein S26	Two-hybrid	BioGRID	16169070
PDCD10	CCM3 \| MGC1212 \| MGC24477 \| TFAR15	programmed cell death 10	Affinity Capture-MS	BioGRID	18782753
PPFIA1	FLJ41337 \| FLJ42630 \| FLJ43474 \| LIP.1 \| LIP1 \| LIPRIN \| MGC26800	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	Affinity Capture-MS	BioGRID	18782753
PPFIA2	FLJ41378 \| MGC132572	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	Affinity Capture-MS	BioGRID	18782753
PPFIA3	KIAA0654 \| LPNA3 \| MGC126567 \| MGC126569	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3	Affinity Capture-MS	BioGRID	18782753
PPM1B	MGC21657 \| PP2C-beta-X \| PP2CB \| PP2CBETA \| PPC2BETAX	protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform	Co-purification	BioGRID	10934208
PPME1	FLJ22226 \| PME-1	protein phosphatase methylesterase 1	Affinity Capture-MS	BioGRID	18782753
PPP2R1A	MGC786 \| PR65A	protein phosphatase 2 (formerly 2A), regulatory subunit A, alpha isoform	Affinity Capture-MS Affinity Capture-Western Reconstituted Complex	BioGRID	12370081 \|18782753
PPP2R1A	MGC786 \| PR65A		A-alpha subunit interacts with C-alpha subunit of PP2A.	BIND	12370081
PPP2R1B	MGC26454 \| PR65B	protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform	Affinity Capture-MS Affinity Capture-Western Reconstituted Complex	BioGRID	12370081 \|18782753
PPP2R1B	MGC26454 \| PR65B		A-beta subunit interacts with C-alpha subunit of PP2A. This interaction was modeled on a demonstrated interaction between human A-beta subunit and rabbit C-alpha subunit.	BIND	11313937
PPP2R2A	B55-ALPHA \| B55A \| FLJ26613 \| MGC52248 \| PR52A \| PR55A	protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform	-	HPRD,BioGRID	1328247
PPP2R2C	B55-GAMMA \| IMYPNO \| IMYPNO1 \| MGC33570 \| PR52 \| PR55G	protein phosphatase 2 (formerly 2A), regulatory subunit B, gamma isoform	Affinity Capture-MS	BioGRID	18782753
PPP2R2D	MDS026	protein phosphatase 2, regulatory subunit B, delta isoform	Affinity Capture-MS	BioGRID	18782753
PPP2R3A	PPP2R3 \| PR130 \| PR72	protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha	Two-hybrid	BioGRID	10629059
PPP2R3B	NY-REN-8 \| PPP2R3L \| PPP2R3LY \| PR48	protein phosphatase 2 (formerly 2A), regulatory subunit B'', beta	Affinity Capture-MS Two-hybrid	BioGRID	10629059 \|18782753
PPP2R5A	B56A \| MGC131915 \| PR61A	protein phosphatase 2, regulatory subunit B', alpha isoform	Affinity Capture-MS	BioGRID	18782753
PPP2R5B	B56B \| FLJ35411 \| PR61B	protein phosphatase 2, regulatory subunit B', beta isoform	Affinity Capture-MS	BioGRID	18782753
PPP2R5C	B56G \| MGC23064 \| PR61G	protein phosphatase 2, regulatory subunit B', gamma isoform	Affinity Capture-MS Affinity Capture-Western	BioGRID	10675325 \|18782753
PPP2R5D	B56D \| MGC2134 \| MGC8949	protein phosphatase 2, regulatory subunit B', delta isoform	Affinity Capture-MS	BioGRID	18782753
PPP2R5E	-	protein phosphatase 2, regulatory subunit B', epsilon isoform	Affinity Capture-MS in vivo	BioGRID	8703017 \|18782753
PRKCD	MAY1 \| MGC49908 \| PKCD \| nPKC-delta	protein kinase C, delta	Biochemical Activity	BioGRID	11959144
PTN	HARP \| HBGF8 \| HBNF \| NEGF1	pleiotrophin	Two-hybrid	BioGRID	16169070
PXN	FLJ16691	paxillin	Affinity Capture-Western	BioGRID	10675325
RELA	MGC131774 \| NFKB3 \| p65	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	Reconstituted Complex	BioGRID	11591705
RP5-1000E10.4	DKFZp686A0768 \| FLJ21168 \| SIKE	suppressor of IKK epsilon	Affinity Capture-MS	BioGRID	18782753
RP6-213H19.1	MASK \| MST4	serine/threonine protein kinase MST4	Affinity Capture-MS	BioGRID	18782753
RPS6KB1	PS6K \| S6K \| S6K1 \| STK14A \| p70(S6K)-alpha \| p70-S6K \| p70-alpha	ribosomal protein S6 kinase, 70kDa, polypeptide 1	-	HPRD	11438723
STK24	MST-3 \| MST3 \| MST3B \| STE20 \| STK3	serine/threonine kinase 24 (STE20 homolog, yeast)	Affinity Capture-MS	BioGRID	18782753
STK25	DKFZp686J1430 \| SOK1 \| YSK1	serine/threonine kinase 25 (STE20 homolog, yeast)	Affinity Capture-MS	BioGRID	18782753
STRN	MGC125642 \| SG2NA	striatin, calmodulin binding protein	Affinity Capture-MS	BioGRID	18782753
STRN	MGC125642 \| SG2NA	striatin, calmodulin binding protein	-	HPRD	10681496
STRN3	SG2NA	striatin, calmodulin binding protein 3	Affinity Capture-MS	BioGRID	18782753
STRN4	FLJ35594 \| ZIN \| zinedin	striatin, calmodulin binding protein 4	Affinity Capture-MS	BioGRID	18782753
TBCD	KIAA0988	tubulin folding cofactor D	Affinity Capture-Western	BioGRID	12912990
TCP1	CCT-alpha \| CCT1 \| CCTa \| D6S230E \| TCP-1-alpha	t-complex 1	Affinity Capture-MS	BioGRID	18782753
TLX1	HOX11 \| MGC163402 \| TCL3	T-cell leukemia homeobox 1	Affinity Capture-Western Reconstituted Complex Two-hybrid	BioGRID	9009195
TP53	FLJ92943 \| LFS1 \| TRP53 \| p53	tumor protein p53	p53 interacts with PPP2CA. This interaction is modeled on a demonstrated interaction between p53 from an unspecified source and human PP2AC.	BIND	12556559
TRAF3IP3	DJ434O14.3 \| FLJ44151 \| MGC117354 \| MGC163289 \| T3JAM	TRAF3 interacting protein 3	Affinity Capture-MS	BioGRID	18782753
TRIP13	16E1BP	thyroid hormone receptor interactor 13	Two-hybrid	BioGRID	16189514

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
KEGG_OOCYTE_MEIOSIS	114	79	All SZGR genes in this pathway
KEGG_WNT_SIGNALING_PATHWAY	151	112	All SZGR genes in this pathway
KEGG_TGF_BETA_SIGNALING_PATHWAY	86	64	All SZGR genes in this pathway
KEGG_TIGHT_JUNCTION	134	86	All SZGR genes in this pathway
KEGG_LONG_TERM_DEPRESSION	70	53	All SZGR genes in this pathway
BIOCARTA_AKAP95_PATHWAY	12	9	All SZGR genes in this pathway
BIOCARTA_AKT_PATHWAY	22	16	All SZGR genes in this pathway
BIOCARTA_CTCF_PATHWAY	23	18	All SZGR genes in this pathway
BIOCARTA_P35ALZHEIMERS_PATHWAY	11	9	All SZGR genes in this pathway
BIOCARTA_ERK_PATHWAY	28	22	All SZGR genes in this pathway
BIOCARTA_GSK3_PATHWAY	27	26	All SZGR genes in this pathway
BIOCARTA_KERATINOCYTE_PATHWAY	46	38	All SZGR genes in this pathway
BIOCARTA_MTOR_PATHWAY	23	15	All SZGR genes in this pathway
BIOCARTA_AKAPCENTROSOME_PATHWAY	15	14	All SZGR genes in this pathway
BIOCARTA_CHREBP2_PATHWAY	42	35	All SZGR genes in this pathway
BIOCARTA_CK1_PATHWAY	17	17	All SZGR genes in this pathway
BIOCARTA_IGF1MTOR_PATHWAY	20	14	All SZGR genes in this pathway
BIOCARTA_TEL_PATHWAY	18	15	All SZGR genes in this pathway
BIOCARTA_WNT_PATHWAY	26	24	All SZGR genes in this pathway
WNT_SIGNALING	89	71	All SZGR genes in this pathway
PID_ATR_PATHWAY	39	25	All SZGR genes in this pathway
PID_PLK1_PATHWAY	46	25	All SZGR genes in this pathway
PID_MYC_PATHWAY	25	22	All SZGR genes in this pathway
PID_ERBB1_DOWNSTREAM_PATHWAY	105	78	All SZGR genes in this pathway
PID_PDGFRB_PATHWAY	129	103	All SZGR genes in this pathway
PID_IL8_CXCR2_PATHWAY	34	26	All SZGR genes in this pathway
PID_P53_REGULATION_PATHWAY	59	50	All SZGR genes in this pathway
PID_RB_1PATHWAY	65	46	All SZGR genes in this pathway
PID_TGFBR_PATHWAY	55	38	All SZGR genes in this pathway
REACTOME_SIGNALING_BY_WNT	65	41	All SZGR genes in this pathway
REACTOME_SIGNALLING_BY_NGF	217	167	All SZGR genes in this pathway
REACTOME_CTNNB1_PHOSPHORYLATION_CASCADE	16	11	All SZGR genes in this pathway
REACTOME_SPRY_REGULATION_OF_FGF_SIGNALING	14	9	All SZGR genes in this pathway
REACTOME_TRIF_MEDIATED_TLR3_SIGNALING	74	54	All SZGR genes in this pathway
REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING	37	24	All SZGR genes in this pathway
REACTOME_CELL_CYCLE	421	253	All SZGR genes in this pathway
REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE	137	105	All SZGR genes in this pathway
REACTOME_SIGNALING_BY_FGFR_IN_DISEASE	127	88	All SZGR genes in this pathway
REACTOME_NUCLEAR_EVENTS_KINASE_AND_TRANSCRIPTION_FACTOR_ACTIVATION	24	20	All SZGR genes in this pathway
REACTOME_ERKS_ARE_INACTIVATED	12	9	All SZGR genes in this pathway
REACTOME_ERK_MAPK_TARGETS	21	17	All SZGR genes in this pathway
REACTOME_GLYCOLYSIS	29	18	All SZGR genes in this pathway
REACTOME_SIGNALING_BY_GPCR	920	449	All SZGR genes in this pathway
REACTOME_INTEGRATION_OF_ENERGY_METABOLISM	120	84	All SZGR genes in this pathway
REACTOME_CELL_CYCLE_MITOTIC	325	185	All SZGR genes in this pathway
REACTOME_OPIOID_SIGNALLING	78	56	All SZGR genes in this pathway
REACTOME_DARPP_32_EVENTS	25	20	All SZGR genes in this pathway
REACTOME_G1_PHASE	38	23	All SZGR genes in this pathway
REACTOME_G1_S_TRANSITION	112	63	All SZGR genes in this pathway
REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY	63	48	All SZGR genes in this pathway
REACTOME_CTLA4_INHIBITORY_SIGNALING	21	15	All SZGR genes in this pathway
REACTOME_METABOLISM_OF_MRNA	284	128	All SZGR genes in this pathway
REACTOME_METABOLISM_OF_RNA	330	155	All SZGR genes in this pathway
REACTOME_MITOTIC_G1_G1_S_PHASES	137	79	All SZGR genes in this pathway
REACTOME_MITOTIC_M_M_G1_PHASES	172	98	All SZGR genes in this pathway
REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE	50	37	All SZGR genes in this pathway
REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES	30	24	All SZGR genes in this pathway
REACTOME_PLATELET_HOMEOSTASIS	78	49	All SZGR genes in this pathway
REACTOME_PLATELET_SENSITIZATION_BY_LDL	16	9	All SZGR genes in this pathway
REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION	77	57	All SZGR genes in this pathway
REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE	72	53	All SZGR genes in this pathway
REACTOME_INHIBITION_OF_REPLICATION_INITIATION_OF_DAMAGED_DNA_BY_RB1_E2F1	13	6	All SZGR genes in this pathway
REACTOME_DNA_REPLICATION	192	110	All SZGR genes in this pathway
REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION	35	17	All SZGR genes in this pathway
REACTOME_METABOLISM_OF_CARBOHYDRATES	247	154	All SZGR genes in this pathway
REACTOME_HEMOSTASIS	466	331	All SZGR genes in this pathway
REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE	83	63	All SZGR genes in this pathway
REACTOME_INNATE_IMMUNE_SYSTEM	279	178	All SZGR genes in this pathway
REACTOME_MITOTIC_PROMETAPHASE	87	51	All SZGR genes in this pathway
REACTOME_ACTIVATED_TLR4_SIGNALLING	93	69	All SZGR genes in this pathway
REACTOME_IMMUNE_SYSTEM	933	616	All SZGR genes in this pathway
REACTOME_TOLL_RECEPTOR_CASCADES	118	84	All SZGR genes in this pathway
REACTOME_GLUCOSE_METABOLISM	69	42	All SZGR genes in this pathway
REACTOME_ADAPTIVE_IMMUNE_SYSTEM	539	350	All SZGR genes in this pathway
REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX	176	57	All SZGR genes in this pathway
REACTOME_SIGNALING_BY_FGFR	112	80	All SZGR genes in this pathway
WATANABE_RECTAL_CANCER_RADIOTHERAPY_RESPONSIVE_DN	92	51	All SZGR genes in this pathway
DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP	1382	904	All SZGR genes in this pathway
OSMAN_BLADDER_CANCER_DN	406	230	All SZGR genes in this pathway
BIDUS_METASTASIS_UP	214	134	All SZGR genes in this pathway
ENK_UV_RESPONSE_EPIDERMIS_DN	508	354	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	855	609	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN	483	336	All SZGR genes in this pathway
NUYTTEN_EZH2_TARGETS_UP	1037	673	All SZGR genes in this pathway
BENPORATH_MYC_MAX_TARGETS	775	494	All SZGR genes in this pathway
BENPORATH_CYCLING_GENES	648	385	All SZGR genes in this pathway
COLLIS_PRKDC_REGULATORS	15	10	All SZGR genes in this pathway
KAUFFMANN_DNA_REPLICATION_GENES	147	87	All SZGR genes in this pathway
SMITH_TERT_TARGETS_UP	145	91	All SZGR genes in this pathway
LU_IL4_SIGNALING	94	56	All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_DN	1237	837	All SZGR genes in this pathway
NATSUME_RESPONSE_TO_INTERFERON_BETA_DN	52	33	All SZGR genes in this pathway
SESTO_RESPONSE_TO_UV_C1	72	45	All SZGR genes in this pathway
JIANG_AGING_CEREBRAL_CORTEX_DN	54	43	All SZGR genes in this pathway
KYNG_DNA_DAMAGE_BY_GAMMA_RADIATION	81	59	All SZGR genes in this pathway
KYNG_DNA_DAMAGE_DN	195	135	All SZGR genes in this pathway
DAIRKEE_CANCER_PRONE_RESPONSE_BPA_E2	118	65	All SZGR genes in this pathway
HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP	163	102	All SZGR genes in this pathway
DANG_BOUND_BY_MYC	1103	714	All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_4HR_DN	254	158	All SZGR genes in this pathway
WHITFIELD_CELL_CYCLE_M_G1	148	95	All SZGR genes in this pathway
FIGUEROA_AML_METHYLATION_CLUSTER_3_UP	170	97	All SZGR genes in this pathway
FIGUEROA_AML_METHYLATION_CLUSTER_6_UP	140	81	All SZGR genes in this pathway
FIGUEROA_AML_METHYLATION_CLUSTER_7_UP	118	68	All SZGR genes in this pathway
FEVR_CTNNB1_TARGETS_DN	553	343	All SZGR genes in this pathway
IKEDA_MIR133_TARGETS_UP	43	27	All SZGR genes in this pathway
WAKABAYASHI_ADIPOGENESIS_PPARG_RXRA_BOUND_8D	882	506	All SZGR genes in this pathway
RAO_BOUND_BY_SALL4_ISOFORM_B	517	302	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-125/351	476	482	1A	hsa-miR-125b^brain	UCCCUGAGACCCUAACUUGUGA
miR-125/351	476	482	1A	hsa-miR-125a^brain	UCCCUGAGACCCUUUAACCUGUG
miR-133	123	129	1A	hsa-miR-133a	UUGGUCCCCUUCAACCAGCUGU
miR-133	123	129	1A	hsa-miR-133b	UUGGUCCCCUUCAACCAGCUA
miR-139	365	372	1A,m8	hsa-miR-139^brain	UCUACAGUGCACGUGUCU
miR-141/200a	645	651	m8	hsa-miR-141	UAACACUGUCUGGUAAAGAUGG
miR-141/200a	645	651	m8	hsa-miR-200a	UAACACUGUCUGGUAACGAUGU
miR-17-5p/20/93.mr/106/519.d	180	186	1A	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-183	135	142	1A,m8	hsa-miR-183	UAUGGCACUGGUAGAAUUCACUG
miR-188	478	484	1A	hsa-miR-188	CAUCCCUUGCAUGGUGGAGGGU
miR-200bc/429	19	25	m8	hsa-miR-200b	UAAUACUGCCUGGUAAUGAUGAC
				hsa-miR-200c	UAAUACUGCCGGGUAAUGAUGG
				hsa-miR-429	UAAUACUGUCUGGUAAAACCGU
miR-219	388	394	1A	hsa-miR-219^brain	UGAUUGUCCAAACGCAAUUCU
miR-29	718	724	m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-409-3p	97	104	1A,m8	hsa-miR-409-3p	CGAAUGUUGCUCGGUGAACCCCU
miR-452	384	390	1A	hsa-miR-452	UGUUUGCAGAGGAAACUGAGAC
miR-495	557	563	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.