Search results: The pahtway p4405 has 140 genes in the original annotation. Currently, there are 81 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
83860TAF3TAF140 | TAFII-140 | TAFII140TATA-box binding protein associated factor 310p15.1CV:PGCnp
DMG:Jaffe_2016
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
340665CYP26C1FFDD4cytochrome P450 family 26 subfamily C member 110q23.33CV:PGCnp
GO_Annotation
PMID:cooccur
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
10570DPYSL4CRMP3 | DRP-4 | ULIP4dihydropyrimidinase like 410q26CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
154810AMOTL1JEAPangiomotin like 111q14.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
25996REXO2CGI-114 | REX2 | RFN | SFNRNA exonuclease 211q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
1911PHC1EDR1 | HPH1 | MCPH11 | RAE28polyhomeotic homolog 112p13CV:PGCnp
DMG:Jaffe_2016
Expression
Chromatin Remodeling Genes
9573GDF3KFS3 | MCOP7 | MCOPCB6growth differentiation factor 312p13.1CV:PGCnp
PMID:cooccur
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
3887KRT81HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1keratin 8112q13CV:PGCnp
57658CALCOCO1Cocoa | PP13275 | calphoglincalcium binding and coiled-coil domain 112q13.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
11213IRAK3ASRT5 | IRAKMinterleukin 1 receptor associated kinase 312q14.3CV:PGCnp
DEG:Sanders_2013
DMG:Nishioka_2013
79758DHRS12SDR40C1dehydrogenase/reductase (SDR family) member 1213q14.3DMG:Wockner_2014
23428SLC7A8LAT2 | LPI-PC1solute carrier family 7 member 814q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
2957GTF2A1TF2A1 | TFIIA | TFIIA-42 | TFIIALgeneral transcription factor IIA 114q31.1CV:GWASdb
CV:PGCnp
6447SCG57B2 | P7B2 | SGNE1 | SgVsecretogranin V15q13-q14CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
54852PAQR5MPRGprogestin and adipoQ receptor family member V15q23CV:GWAScat
CV:GWASdb
CV:PGCnp
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
23174ZCCHC14BDG-29 | BDG29zinc finger CCHC-type containing 1416q24.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
1949EFNB3EFL6 | EPLG8 | LERK8ephrin-B317p13.1CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
116840CNTROBLIP8 | PP1221centrobin, centrosomal BRCA2 interacting protein17p13.1CV:PGCnp
9196KCNAB3AKR6A9 | KCNA3.1B | KCNA3B | KV-BETA-3potassium voltage-gated channel subfamily A regulatory beta subunit 317p13.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
58485TRAPPC1BET5 | MUM2trafficking protein particle complex 117p13.1CV:PGCnp
26115TANC2ROLSA | rolstetratricopeptide repeat, ankyrin repeat and coiled-coil containing 217q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
29115SAP30BPHCNGP | HTRG | HTRPSAP30 binding protein17q25.1CV:PGCnp
DNM:Xu_2012
CompositeSet
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
114876OSBPL1AORP-1 | ORP1 | OSBPL1Boxysterol binding protein like 1A18q11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
125476INO80CC18orf37 | IES6 | hIes6INO80 complex subunit C18q12.2CV:PGCnp
9063PIAS2ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4protein inhibitor of activated STAT 218q21.1CV:PGCnp
PMID:cooccur
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
4784NFIXMRSHSS | NF1A | SOTOS2nuclear factor I/X (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
56848SPHK2SK 2 | SK-2 | SPK 2 | SPK-2sphingosine kinase 219q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6625SNRNP70RNPU1Z | RPU1 | SNRP70 | Snp1 | U1-70K | U170K | U1AP | U1RNPsmall nuclear ribonucleoprotein U1 subunit 7019q13.3CV:PGCnp
63934ZNF667MIPU1zinc finger protein 66719q13.43CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
147948ZNF582-zinc finger protein 58219q13.43CV:PGCnp
284312ZSCAN1MZF-1 | ZNF915zinc finger and SCAN domain containing 119q13.43CV:PGCnp
DMG:Wockner_2014
84144SYDE2-synapse defective 1, Rho GTPase, homolog 2 (C. elegans)1p22.3CV:PGCnp
DMG:Jaffe_2016
148479PHF13PHF5 | SPOC1PHD finger protein 131p36.31CV:PGCnp
54460MRPS21MDS016 | MRP-S21 | RPMS21mitochondrial ribosomal protein S211q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
51686OAZ3AZ3 | OAZ-t | TISP15ornithine decarboxylase antizyme 31q21.3DMG:Wockner_2014
GSMA_I
GSMA_IIA
26052DNM3Dyna IIIdynamin 31q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
79175ZNF343dJ734P14.5zinc finger protein 34320p13CV:PGCnp
DMG:Jaffe_2016
58476TP53INP2C20orf110 | DOR | PINH | dJ1181N3.1tumor protein p53 inducible nuclear protein 220q11.22CV:PGCnp
DMG:vanEijk_2014
140689CBLN4CBLNL1cerebellin 4 precursor20q13CV:PGCnp
DMG:Nishioka_2013
3172HNF4AFRTS4 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | HNF4alpha | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14hepatocyte nuclear factor 4 alpha20q13.12CV:PGCnp
GO_Annotation
PMID:cooccur
3455IFNAR2IFN-R | IFN-alpha-REC | IFNABR | IFNARB | IMD45interferon alpha and beta receptor subunit 221q22.11CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
9929JOSD1dJ508I15.2Josephin domain containing 122q13.1CV:PGCnp
DMG:Wockner_2014
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
8828NRP2NP2 | NPN2 | PRO2714 | VEGF165R2neuropilin 22q33.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
51143DYNC1LI1DNCLI1 | LIC1dynein cytoplasmic 1 light intermediate chain 13p22.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5217PFN2D3S1319E | PFLprofilin 23q25.1NetworkSTRUCTURAL PLASTICITY
CompositeSet
131408FAM131AC3orf40 | FLAT715 | PRO1378family with sequence similarity 131 member A3q27.1DMG:Wockner_2014
80235PIGZGPI-MT-IV | PIG-Z | SMP3phosphatidylinositol glycan anchor biosynthesis class Z3q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
8310ACOX3-acyl-CoA oxidase 3, pristanoyl4p15.3CV:PGCnp
DMG:Nishioka_2013
53407STX18Ufe1syntaxin 184p16.3-p16.2CV:GWASdb
CV:PGCnp
55763EXOC1BM-102 | SEC3 | SEC3L1 | SEC3Pexocyst complex component 14q12CV:PGCnp
PMID:cooccur
EXOCYTOSIS
CompositeSet
4126MANBAMANB1mannosidase beta4q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
2983GUCY1B3GC-S-beta-1 | GC-SB3 | GUC1B3 | GUCB3 | GUCSB3 | GUCY1B1guanylate cyclase 1, soluble, beta 34q31.3-q33CV:PGCnp
DMG:Wockner_2014
Expression
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
51663ZFRSPG71 | ZFR1zinc finger RNA binding protein5p13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
55789DEPDC1BBRCC3 | XTP1DEP domain containing 1B5q12.1CV:PGCnp
7060THBS4TSP-4 | TSP4thrombospondin 45q13CV:PGCnp
PMID:cooccur
1393CRHBPCRF-BP | CRFBPcorticotropin releasing hormone binding protein5q13.3CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
5515PPP2CAPP2Ac | PP2CA | PP2Calpha | RP-Cprotein phosphatase 2 catalytic subunit alpha5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
222584FAM83BC6orf143family with sequence similarity 83 member B6p12.1CV:PGCnp
GSMA_IIE
23113CUL9H7AP1 | PARCcullin 96p21.1CV:GWASdb
CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
9374PPT2C6orf8 | G14 | PPT-2palmitoyl-protein thioesterase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
5460POU5F1OCT3 | OCT4 | OTF-3 | OTF3 | OTF4 | Oct-3 | Oct-4POU class 5 homeobox 16p21.31CV:PGCnp
GSMA_I
80863PRRT1C6orf31 | DSPD1 | IFITMD7 | NG5proline rich transmembrane protein 16p21.32CV:PGCnp
DMG:Montano_2016
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
10690FUT9Fuc-TIXfucosyltransferase 9 (alpha (1,3) fucosyltransferase)6q16CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
285755PPIL6PPIase | RSPH12 | bA425D10.6 | dJ919F19.1peptidylprolyl isomerase like 66q21CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
9053MAP7E-MAP-115 | EMAP115microtubule associated protein 76q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8379MAD1L1MAD1 | PIG9 | TP53I9 | TXBP181MAD1 mitotic arrest deficient-like 1 (yeast)7p22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
26281FGF20FGF-20 | RHDA2fibroblast growth factor 208p22CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
51010EXOSC3CGI-102 | PCH1B | RRP40 | Rrp40p | bA3J10.7 | hRrp-40 | p10exosome component 39p11CV:PGCnp
PMID:cooccur
7010TEKCD202B | TIE-2 | TIE2 | VMCM | VMCM1TEK receptor tyrosine kinase9p21CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
1993ELAVL2HEL-N1 | HELN1 | HUBELAV like neuron-specific RNA binding protein 29p21CV:GWASdb
CV:PGCnp
PMID:cooccur
1193CLIC2CLIC2b | MRXS32 | XAP121chloride intracellular channel 2Xq28CV:PGCnp
PMID:cooccur