Search results: The pahtway p4517 has 553 genes in the original annotation. Currently, there are 344 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6815STYX-serine/threonine/tyrosine interacting protein-CV:PGCnp
DMG:Wockner_2014
3799KIF5BHEL-S-61 | KINH | KNS | KNS1 | UKHCkinesin family member 5B10p11.22CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
8029CUBNIFCR | MGA1 | gp280cubilin10p12.31CV:PGCnp
DMG:Wockner_2014
23560GTPBP4CRFG | NGB | NOG1GTP binding protein 410p15-p14CV:PGCnp
10531PITRM1MP1 | PrePpitrilysin metallopeptidase 110p15.2CV:PGCnp
DMG:Wockner_2014
DNM:Guipponi_2014
5214PFKPATP-PFK | PFK-C | PFK-P | PFKFphosphofructokinase, platelet10p15.3-p15.2CV:PGCnp
DMG:Wockner_2014
Network
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8031NCOA4ARA70 | ELE1 | PTC3 | RFGnuclear receptor coactivator 410q11.2DMG:Wockner_2014
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
50674NEUROG3Atoh5 | Math4B | NGN-3 | bHLHa7 | ngn3neurogenin 310q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
3416IDEINSULYSINinsulin degrading enzyme10q23-q25CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
5728PTEN10q23del | BZS | CWS1 | DEC | GLM2 | MHAM | MMAC1 | PTEN1 | TEP1phosphatase and tensin homolog10q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
1559CYP2C9CPC9 | CYP2C | CYP2C10 | CYPIIC9 | P450IIC9cytochrome P450 family 2 subfamily C member 910q24CV:GWASdb
CV:PGCnp
PMID:cooccur
9060PAPSS2ATPSK2 | BCYM4 | SK23'-phosphoadenosine 5'-phosphosulfate synthase 210q24CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6571SLC18A2SVAT | SVMT | VAT2 | VMAT2solute carrier family 18 member A210q25ADT:Sun_2012
Association
CV:PGCnp
DNM:Gulsuner_2013
GR_Ng
PMID:cooccur
NEUROTRANSMITTER METABOLISM
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
150ADRA2AADRA2 | ADRA2R | ADRAR | ALPHA2AAR | ZNF32adrenoceptor alpha 2A10q25.2ADT:Sun_2012
CV:PGCnp
Network
PMID:cooccur
GPCR SIGNALLING
10539GLRX3GLRX4 | GRX3 | GRX4 | PICOT | TXNL2 | TXNL3glutaredoxin 310q26CV:PGCnp
GSMA_IIA
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
10844TUBGCP2GCP-2 | GCP2 | Grip103 | SPBC97 | Spc97p | h103p | hGCP2 | hSpc97tubulin gamma complex associated protein 210q26.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
Ascano FMRP targets
53ACP2LAPacid phosphatase 2, lysosomal11p11.2|11p12-p11CV:PGCnp
PMID:cooccur
Ascano FMRP targets
26298EHFESE3 | ESE3B | ESEJETS homologous factor11p12CV:GWAScat
CV:PGCnp
PMID:cooccur
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
10480EIF3MB5 | GA17 | PCID1 | TANGO7 | hfl-B5eukaryotic translation initiation factor 3 subunit M11p13CV:PGCnp
DMG:Jaffe_2016
4076CAPRIN1GPIAP1 | GPIP137 | GRIP137 | M11S1 | RNG105 | p137GPIcell cycle associated protein 111p13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
81930KIF18AMS-KIF18A | PPP1R99kinesin family member 18A11p14.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
5682PSMA1HC2 | HEL-S-275 | NU | PROS30proteasome subunit alpha 111p15.1CV:PGCnp
DMG:Jaffe_2016
Network
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
3784KCNQ1ATFB1 | ATFB3 | JLNS1 | KCNA8 | KCNA9 | KVLQT1 | Kv1.9 | Kv7.1 | LQT | LQT1 | RWS | SQT2 | WRSpotassium voltage-gated channel subfamily Q member 111p15.5CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
PMID:cooccur
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
10581IFITM21-8D | DSPA2cinterferon induced transmembrane protein 211p15.5Expression
PMID:cooccur
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
6749SSRP1FACT | FACT80 | T160structure specific recognition protein 111q12CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
Chromatin Remodeling Genes
3619INCENP-inner centromere protein11q12.3CV:PGCnp
DMG:Wockner_2014
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
1374CPT1ACPT1 | CPT1-L | L-CPT1carnitine palmitoyltransferase 1A11q13.2CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Expression
PMID:cooccur
10008KCNE3HOKPP | HYPP | MiRP2potassium voltage-gated channel subfamily E regulatory subunit 311q13.4CV:PGCnpEXCITABILITY
60496AASDHPPTAASD-PPT | ACPS | CGI-80 | LYS2 | LYS5aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase11q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
219855SLC37A2pp11662solute carrier family 37 member 211q24.2CV:PGCnp
65981CAPRIN2C1QDC1 | EEG-1 | EEG1 | RNG140caprin family member 212p11CV:PGCnp
11171STRAPMAWD | PT-WD | UNRIPserine/threonine kinase receptor associated protein12p12.3CV:PGCnp
PMID:cooccur
894CCND2KIAK0002 | MPPH3cyclin D212p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
50511SYCP3COR1 | RPRGL4 | SCP3 | SPGF4synaptonemal complex protein 312qDMG:Wockner_2014
GO_Annotation
6667SP1-Sp1 transcription factor12q13.1CV:PGCnp
Network
PMID:cooccur
113251LARP4PP13296La ribonucleoprotein domain family member 412q13.12CV:PGCnp
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
23468CBX5HEL25 | HP1 | HP1Achromobox 512q13.13CV:PGCnp
DNM:Gulsuner_2013
5036PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G412q13.2CV:PGCnp
DMG:Wockner_2014
Network
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
8091HMGA2BABL | HMGI-C | HMGIC | LIPO | STQTL9high mobility group AT-hook 212q15CV:PGCnp
PMID:cooccur
1466CSRP2CRP2 | LMO5 | SmLIMcysteine and glycine rich protein 212q21.1CV:PGCnp
DMG:Wockner_2014
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
949SCARB1CD36L1 | CLA-1 | CLA1 | HDLQTL6 | SR-BI | SRB1scavenger receptor class B member 112q24.31CV:PGCnp
DMG:Wockner_2014
9735KNTC1RODkinetochore associated 112q24.31CV:PGCnp
51433ANAPC5APC5anaphase promoting complex subunit 512q24.31CV:PGCnp
DNM:Fromer_2014
CompositeSet
65117RSRC2-arginine/serine-rich coiled-coil 212q24.31CV:PGCnp
3651PDX1GSF | IDX-1 | IPF1 | IUF1 | MODY4 | PAGEN1 | PDX-1 | STF-1pancreatic and duodenal homeobox 113q12.1CV:PGCnp
PMID:cooccur
23047PDS5BAPRIN | AS3 | CG008PDS5 cohesin associated factor B13q12.3CV:PGCnpCompositeSet
Darnell FMRP targets
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
26586CKAP2LB1 | TMAP | se20-10cytoskeleton associated protein 213q14CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
5100PCDH8ARCADLIN | PAPCprotocadherin 813q21.1Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
79866BORAC13orf34bora, aurora kinase A activator13q22.1CV:PGCnp
PMID:cooccur
22894DIS32810028N01Rik | EXOSC11 | KIAA1008 | RRP44 | dis3pDIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease13q22.1CV:PGCnp
9375TM9SF2P76transmembrane 9 superfamily member 213q32.3CV:PGCnp
DMG:Jaffe_2016
22821RASA3GAP1IP4BP | GAPIIIRAS p21 protein activator 313q34CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
55608ANKRD10-ankyrin repeat domain 1013q34CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
328APEX1APE | APE1 | APEN | APEX | APX | HAP1 | REF1apurinic/apyrimidinic endodeoxyribonuclease 114q11.2DMG:Nishioka_2013
GSMA_I
Network
55632G2E3KIAA1333 | PHF7BG2/M-phase specific E3 ubiquitin protein ligase14q12CV:PGCnp
GSMA_I
394ARHGAP5GFI2 | RhoGAP5 | p190-B | p190BRhoGAPRho GTPase activating protein 514q12CV:PGCnp
GSMA_I
5687PSMA6IOTA | PROS27 | p27Kproteasome subunit alpha 614q13CV:GWASdb
CV:PGCnp
Network
6655SOS2NS9SOS Ras/Rho guanine nucleotide exchange factor 214q21CV:PGCnp
DNM:Gulsuner_2013
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
382ARF6-ADP ribosylation factor 614q21.3CV:PGCnp
Network
PMID:cooccur
55172DNAAF2C14orf104 | CILD10 | KTU | PF13dynein (axonemal) assembly factor 214q21.3CV:PGCnp
Expression
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
5529PPP2R5E-protein phosphatase 2 regulatory subunit B', epsilon14q23.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
81537SGPP1SPPase1sphingosine-1-phosphate phosphatase 114q23.2CV:PGCnp
PMID:cooccur
4522MTHFD1MTHFC | MTHFDmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase14q24Association
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
2079ERHDROERenhancer of rudimentary homolog (Drosophila)14q24.1DMG:Nishioka_2013
51466EVLRNB6Enah/Vasp-like14q32.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
10914PAPOLAPAPpoly(A) polymerase alpha14q32.31CV:PGCnp
DMG:Wockner_2014
1983EIF5EIF-5 | EIF-5Aeukaryotic translation initiation factor 514q32.32CV:PGCnp
DNM:Girard_2011
Expression
CompositeSet
55038CDCA4HEPP | SEI-3/HEPPcell division cycle associated 414q32.33DMG:Wockner_2014
4212MEIS2HsT18361 | MRG1Meis homeobox 215q14CV:PGCnp
PMID:cooccur
3712IVDACAD2isovaleryl-CoA dehydrogenase15q14-q15CV:PGCnp
PMID:cooccur
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
84888SPPL2AIMP3 | PSL2signal peptide peptidase like 2A15q21.2CV:PGCnp
PMID:cooccur
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
10845CLPX-caseinolytic mitochondrial matrix peptidase chaperone subunit15q22.31DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9055PRC1ASE1protein regulator of cytokinesis 115q26.1CV:PGCnp
283777FAM169B-family with sequence similarity 169 member B15q26.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3835KIF22A-328A3.2 | KID | KNSL4 | OBP | OBP-1 | OBP-2 | SEMDJL2kinesin family member 2216p11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
1428CRYMDFNA40 | THBPcrystallin mu16p12.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
STRUCTURAL PLASTICITY
CompositeSet
9738CCP110CP110 | Cep110centriolar coiled-coil protein 110kDa16p12.3CV:PGCnp
GSMA_IIE
55692LUC7LLUC7B1 | Luc7 | SR+89 | hLuc7B1LUC7-like16p13.3CV:PGCnp
57407NMRAL1HSCARG | SDR48A1NmrA-like family domain containing 116p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79801SHCBP1PALSHC SH2-domain binding protein 116q11.2CV:PGCnp
GSMA_IIE
23594ORC6ORC6Lorigin recognition complex subunit 616q12CV:PGCnp
GSMA_IIE
54921CHTF8CTF8 | DERPCchromosome transmission fidelity factor 816q22.1CV:PGCnp
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
10204NUTF2NTF2 | PP15nuclear transport factor 216q22.1CV:PGCnp
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
463ZFHX3ATBF1 | ATBT | ZNF927zinc finger homeobox 316q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
654780SFPQ-splicing factor proline/glutamine-rich16q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
6470SHMT1CSHMT | SHMTserine hydroxymethyltransferase 1 (soluble)17p11.2CV:PGCnp
PMID:cooccur
50628GEMIN4HC56 | HCAP1 | HHRF-1 | p97gem nuclear organelle associated protein 417p13CV:PGCnp
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
80169CTC1AAF-132 | AAF132 | C17orf68 | CRMCC | tmp494178CTS telomere maintenance complex component 117p13.1CV:PGCnp
6117RPA1HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70replication protein A117p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
113235SLC46A1G21 | HCP1 | PCFTsolute carrier family 46 member 117q11.2CV:PGCnp
PMID:cooccur
7756ZNF207BuGZ | hBuGZzinc finger protein 20717q11.2CV:PGCnp
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
1655DDX5G17P1 | HLR1 | HUMP68 | p68DEAD-box helicase 517q21CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
201176ARHGAP27CAMGAP1 | PP905 | SH3D20 | SH3P20Rho GTPase activating protein 2717q21.31CV:PGCnp
10951CBX1CBX | HP1-BETA | HP1Hs-beta | HP1Hsbeta | M31 | MOD1 | p25betachromobox 117q21.32CV:PGCnp
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
124540MSI2MSI2Hmusashi RNA binding protein 217q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4591TRIM37MUL | POB1 | TEF3tripartite motif containing 3717q23.2CV:PGCnp
DMG:Jaffe_2016
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10513APPBP2APP-BP2 | HS.84084 | PAT1amyloid beta precursor protein binding protein 217q23.2CV:PGCnp
DMG:Jaffe_2016
8313AXIN2AXIL | ODCRCSaxin 217q24.1CV:PGCnp
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
6662SOX9CMD1 | CMPD1 | SRA1 | SRXX2 | SRXY10SRY-box 917q24.3CV:PGCnp
PMID:cooccur
3613IMPA2-inositol(myo)-1(or 4)-monophosphatase 218p11.2Association
CV:PGCnp
CV:PheWAS
PMID:cooccur
9097USP14TGTubiquitin specific peptidase 1418p11.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
9984THOC1HPR1 | P84 | P84N5THO complex 118p11.32CV:PGCnp
DMG:Wockner_2014
6093ROCK1P160ROCK | ROCK-IRho associated coiled-coil containing protein kinase 118q11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
361AQP4MIWC | WCH4aquaporin 418q11.2-q12.1CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
ION BALANCE
CompositeSet
7572ZNF24KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191zinc finger protein 2418q12CV:PGCnp
220134SKA1C18orf24spindle and kinetochore associated complex subunit 118q21.1CV:PGCnp
DMG:Wockner_2014
93323HAUS8DGT4 | HICE1 | NY-SAR-48HAUS augmin like complex subunit 819p13.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
55723ASF1BCIA-IIanti-silencing function 1B histone chaperone19p13.12DMG:Jaffe_2016Chromatin Remodeling Genes
2639GCDHACAD5 | GCDglutaryl-CoA dehydrogenase19p13.2CV:PGCnp
DMG:Wockner_2014
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
4784NFIXMRSHSS | NF1A | SOTOS2nuclear factor I/X (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
5424POLD1CDC2 | CRCS10 | MDPL | POLDpolymerase (DNA) delta 1, catalytic subunit19q13.3CV:PGCnp
DMG:Wockner_2014
Expression
10155TRIM28KAP1 | PPP1R157 | RNF96 | TF1B | TIF1Btripartite motif containing 2819q13.4CV:PGCnpAscano FMRP targets
26227PHGDH3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERAphosphoglycerate dehydrogenase1p12CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4853NOTCH2AGS2 | HJCYS | hN2notch 21p13-p11CV:PGCnp
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
10768AHCYL1DCAL | IRBIT | PPP1R78 | PRO0233 | XPVKONAadenosylhomocysteinase like 11p13.2CV:PGCnp
GSMA_I
CompositeSet
2944GSTM1GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1glutathione S-transferase mu 11p13.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
25950RWDD3RSUMERWD domain containing 31p21.3CV:PGCnp
DMG:Wockner_2014
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
2707GJB3CX31 | DFNA2 | DFNA2B | EKVgap junction protein beta 31p34CV:PGCnp
DMG:Jaffe_2016
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
10946SF3A3PRP9 | PRPF9 | SAP61 | SF3a60splicing factor 3a subunit 31p34.3CV:PGCnp
6421SFPQPOMP100 | PPP1R140 | PSFsplicing factor proline/glutamine-rich1p34.3CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
2048EPHB2CAPB | DRT | EK5 | EPHT3 | ERK | Hek5 | PCBC | Tyro5EPH receptor B21p36.1-p35CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
Potential synaptic genes
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
10250SRRM1160-KD | POP101 | SRM160serine and arginine repetitive matrix 11p36.11CV:PGCnp
DMG:Jaffe_2016
10236HNRNPRHNRPR | hnRNP-Rheterogeneous nuclear ribonucleoprotein R1p36.12CV:PGCnp
DMG:Jaffe_2016
23208SYT11SYT12 | sytXIsynaptotagmin 111q21.2Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
3068HDGFHMG1L2hepatoma-derived growth factor1q23.1CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
1401CRPPTX1C-reactive protein, pentraxin-related1q23.2CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
5321PLA2G4APLA2G4 | cPLA2 | cPLA2-alphaphospholipase A2 group IVA1q31.1Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
5549PRELPMST161 | MSTP161 | SLRR2Aproline/arginine-rich end leucine-rich repeat protein1q32CV:GWASdb
CV:PGCnp
51377UCHL5CGI-70 | INO80R | UCH-L5 | UCH37ubiquitin C-terminal hydrolase L51q32CV:PGCnp
DMG:Jaffe_2016
56950SMYD2HSKM-B | KMT3C | ZMYND14SET and MYND domain containing 21q32.3CV:GWASdb
CV:PGCnp
2104ESRRGERR3 | ERRgamma | NR3B3estrogen related receptor gamma1q41CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
64216TFB2MHkp1 | mtTFB2transcription factor B2, mitochondrial1q44CV:PGCnp
DMG:Jaffe_2016
22803XRN2-5'-3' exoribonuclease 220p11.2-p11.1CV:PGCnp
Network
PMID:cooccur
6629SNRPB2Msl1small nuclear ribonucleoprotein polypeptide B20p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
5111PCNAATLD2proliferating cell nuclear antigen20pter-p12Network
PMID:cooccur
8894EIF2S2EIF2 | EIF2B | EIF2beta | PPP1R67 | eIF-2-betaeukaryotic translation initiation factor 2 subunit beta20q11.2CV:PGCnp
Network
Ascano FMRP targets
6431SRSF6B52 | HEL-S-91 | SFRS6 | SRP55serine/arginine-rich splicing factor 620q12-q13.1CV:PGCnp
Expression
100ADA-adenosine deaminase20q13.12CV:PGCnp
Network
PMID:cooccur
8204NRIP1RIP140nuclear receptor interacting protein 121q11.2CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
2618GARTAIRS | GARS | GARTF | PAIS | PGFT | PRGSphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase21q22.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
7074TIAM1-T-cell lymphoma invasion and metastasis 121q22.11CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3150HMGN1HMG14high mobility group nucleosome binding domain 121q22.2CV:PGCnp
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
51386EIF3LEIF3EIP | EIF3S11 | EIF3S6IP | HSPC021 | HSPC025 | MSTP005eukaryotic translation initiation factor 3 subunit L22qCV:PGCnp
DMG:Jaffe_2016
Network
79680C22orf29BOPchromosome 22 open reading frame 2922q11.21CNV:YES
CV:PGCnp
GSMA_I
11200CHEK2CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1checkpoint kinase 222q12.1CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
GSMA_I
4733DRG1NEDD3developmentally regulated GTP binding protein 122q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
158ADSLAMPS | ASASE | ASLadenylosuccinate lyase22q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5967REG1AICRF | P19 | PSP | PSPS | PSPS1 | PTP | REGregenerating family member 1 alpha2p12CV:GWASdb
CV:PGCnp
26505CNNM3ACDP3cyclin and CBS domain divalent metal cation transport mediator 32p12-p11.2CV:PGCnp
DEG:Zhao_2015
DNM:Fromer_2014
GSMA_I
CompositeSet
7841MOGSCDG2B | CWH41 | DER7 | GCS1mannosyl-oligosaccharide glucosidase2p13.1CV:PGCnp
DMG:Wockner_2014
10322SMYD5NN8-4AG | RAI15 | RRG1 | ZMYND23SMYD family member 52p13.2CV:PGCnp
54465ETAA1ETAA16Ewing tumor-associated antigen 12p14CV:PGCnp
DMG:Jaffe_2016
10575CCT4CCT-DELTA | Cctd | SRBchaperonin containing TCP1 subunit 42p15CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
7444VRK2-vaccinia related kinase 22p16.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
51232CRIM1CRIM-1 | S52cysteine rich transmembrane BMP regulator 1 (chordin-like)2p21CV:PGCnp
GO_Annotation
6432SRSF79G8 | AAG3 | SFRS7serine/arginine-rich splicing factor 72p22.1CV:PGCnp
5500PPP1CBHEL-S-80p | PP-1B | PP1B | PP1beta | PPP1CDprotein phosphatase 1 catalytic subunit beta2p23CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
79677SMC6SMC-6 | SMC6L1 | hSMC6structural maintenance of chromosomes 62p24.2CV:PGCnpAscano FMRP targets
52ACP1HAAP | LMW-PTPacid phosphatase 1, soluble2p25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
79901CYBRD1CYB561A2 | DCYTB | FRRS3cytochrome b reductase 12q31.1CV:PGCnp
6741SSBLARP3 | La | La/SSBSjogren syndrome antigen B2q31.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5378PMS1HNPCC3 | MLH2 | PMSL1 | hPMS1PMS1 homolog 1, mismatch repair system component2q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
150737TTC30BIFT70 | IFT70B | fleertetratricopeptide repeat domain 30B2q31.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
8520HAT1KAT1histone acetyltransferase 12q31.2-q33.1CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
10477UBE2E3UBCH9 | UbcM2ubiquitin conjugating enzyme E2 E32q32.1CV:PGCnp
DMG:Jaffe_2016
Network
23451SF3B1Hsh155 | MDS | PRP10 | PRPF10 | SAP155 | SF3b155splicing factor 3b subunit 12q33.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
Ascano FMRP targets
1385CREB1CREB | CREB-1cAMP responsive element binding protein 12q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
5270SERPINE2GDN | GDNPF | PI-7 | PI7 | PN-1 | PN1 | PNIserpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 22q36.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
G2Cdb.humanPSP
4691NCLC23nucleolin2q37.1CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
1499CTNNB1CTNNB | MRD19 | armadillocatenin beta 13p21CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3615IMPDH2IMPD2 | IMPDH-IIIMP (inosine 5'-monophosphate) dehydrogenase 23p21.2CV:PGCnp
8994LIMD1-LIM domains containing 13p21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
10293TRAIPRNF206 | SCKL9 | TRIPTRAF interacting protein3p21.31CV:PGCnp
9497SLC4A7NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6solute carrier family 4 member 73p22CV:PGCnp
GO_Annotation
GSMA_I
5468PPARGCIMT1 | GLM1 | NR1C3 | PPARG1 | PPARG2 | PPARgammaperoxisome proliferator activated receptor gamma3p25CV:PGCnp
GSMA_I
PMID:cooccur
51095TRNT1CCA1 | CGI-47 | MtCCA | SIFDtRNA nucleotidyl transferase, CCA-adding, 13p25.1CV:PGCnp
DMG:Nishioka_2013
23225NUP210GP210 | POM210nucleoporin 210kDa3p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
CompositeSet
7707ZNF148BERF-1 | BFCOL1 | HT-BETA | ZBP-89 | ZFP148 | pHZ-52zinc finger protein 1483q21CV:PGCnp
Expression
8607RUVBL1ECP-54 | ECP54 | INO80H | NMP 238 | NMP238 | PONTIN | Pontin52 | RVB1 | TIH1 | TIP49 | TIP49ARuvB like AAA ATPase 13q21CV:PGCnp
11222MRPL3COXPD9 | MRL3 | RPML3mitochondrial ribosomal protein L33q21-q23CV:PGCnp
60678EEFSECEFSEC | SELBeukaryotic elongation factor, selenocysteine-tRNA-specific3q21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5523PPP2R3APPP2R3 | PR130 | PR72protein phosphatase 2 regulatory subunit B'', alpha3q22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
170506DHX36DDX36 | G4R1 | MLEL1 | RHAUDEAH-box helicase 363q25.2CV:PGCnp
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
2049EPHB3ETK2 | HEK2 | TYRO6EPH receptor B33q27.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
4026LPP-LIM domain containing preferred translocation partner in lipoma3q28CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
6002RGS12-regulator of G-protein signaling 124p16.3CV:PGCnp
DMG:Wockner_2014
DNM:Guipponi_2014
DNM:Xu_2012
Network
PMID:cooccur
CompositeSet
5471PPATATASE | GPAT | PRATphosphoribosyl pyrophosphate amidotransferase4q12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
10606PAICSADE2 | ADE2H1 | AIRC | PAISphosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase4q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2926GRSF1-G-rich RNA sequence binding factor 14q13CV:PGCnp
174AFPAFPD | FETA | HPAFPalpha fetoprotein4q13.3CV:PGCnp
PMID:cooccur
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
65008MRPL1BM022 | L1MT | MRP-L1mitochondrial ribosomal protein L14q21.1CV:PGCnp
DMG:Nishioka_2013
80144FRAS1-Fraser extracellular matrix complex subunit 14q21.21CV:PGCnp
DMG:Wockner_2014
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
3426CFIAHUS3 | ARMD13 | C3BINA | C3b-INA | FI | IF | KAFcomplement factor I4q25CV:PGCnp
GO_Annotation
PMID:cooccur
1998ELF2EU32 | NERF | NERF-1A | NERF-1B | NERF-1a,b | NERF-2E74 like ETS transcription factor 24q28CV:PGCnp
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
60592SCOCHRIHFB2072 | SCOCO | UNC-69short coiled-coil protein4q31.1CV:PGCnp
DMG:Jaffe_2016
Network
8467SMARCA5ISWI | SNF2H | WCRF135 | hISWI | hSNF2HSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 54q31.1-q31.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
5481PPIDCYP-40 | CYPDpeptidylprolyl isomerase D4q31.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
9227LRATLCA14lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)4q32.1CV:PGCnp
CV:PheWAS
54969C4orf27-chromosome 4 open reading frame 274q33CV:PGCnp
1635DCTD-dCMP deaminase4q35.1CV:GWASdb
CV:PGCnp
23530NNTGCCD4nicotinamide nucleotide transhydrogenase5p12CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
9037SEMA5ASEMAF | semFsemaphorin 5A5p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
4552MTRRMSR | cblE5-methyltetrahydrofolate-homocysteine methyltransferase reductase5p15.31CV:PGCnp
PMID:cooccur
5295PIK3R1AGM7 | GRB1 | IMD36 | p85 | p85-ALPHAphosphoinositide-3-kinase regulatory subunit 15q13.1CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
PMID:cooccur
6880TAF9MGC:5067 | STAF31/32 | TAF2G | TAFII-31 | TAFII-32 | TAFII31 | TAFII32 | TAFIID32TATA-box binding protein associated factor 95q13.2DNM:Fromer_2014CompositeSet
8546AP3B1ADTB3 | ADTB3A | HPS | HPS2 | PEadaptor related protein complex 3 beta 1 subunit5q14.1CV:PGCnp
DMG:Jaffe_2016
1070CETN3CDC31 | CEN3centrin 35q14.3CV:PGCnp
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
1036CDO1-cysteine dioxygenase type 15q23.2CV:PGCnp
DMG:Jaffe_2016
6558SLC12A2BSC | BSC2 | NKCC1 | PPP1R141solute carrier family 12 member 25q23.3CV:PGCnp
GSMA_I
PMID:cooccur
2246FGF1AFGF | ECGF | ECGF-beta | ECGFA | ECGFB | FGF-1 | FGF-alpha | FGFA | GLIO703 | HBGF-1 | HBGF1fibroblast growth factor 15q31Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
NEUROTROPHIN SIGNALING
995CDC25CCDC25 | PPP1R60cell division cycle 25C5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
5515PPP2CAPP2Ac | PP2CA | PP2Calpha | RP-Cprotein phosphatase 2 catalytic subunit alpha5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
9555H2AFYH2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2H2A histone family member Y5q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9782MATR3ALS21 | MPD2 | VCPDMmatrin 35q31.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
Network
57222ERGIC1ERGIC-32 | ERGIC32 | NET24endoplasmic reticulum-golgi intermediate compartment 15q35.1CV:PGCnp
Expression
GSMA_IIA
643836ZFP62ZET | ZNF755ZFP62 zinc finger protein5q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
3182HNRNPABABBP1 | HNRPABheterogeneous nuclear ribonucleoprotein A/B5q35.3CV:GWASdb
CV:PGCnp
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
23607CD2APCMSCD2-associated protein6p12CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
6941TCF19SC1 | TCF-19transcription factor 196p21.3CV:PGCnp
GSMA_I
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
3013HIST1H2ADH2A.3 | H2A/g | H2AFGhistone cluster 1, H2ad6p21.3GSMA_I
57819LSM2C6orf28 | G7B | YBL026W | snRNPLSM2 homolog, U6 small nuclear RNA and mRNA degradation associated6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
11270NRMNRM29nurim (nuclear envelope membrane protein)6p21.33CV:PGCnp
DMG:Wockner_2014
GSMA_I
203068TUBBCDCBM6 | CSCSC1 | M40 | OK/SW-cl.56 | TUBB1 | TUBB5tubulin beta class I6p21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
Network
STRUCTURAL PLASTICITY
5987TRIM27RFP | RNF76tripartite motif containing 276p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
6659SOX4EVI16SRY-box 46p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
221656KDM1BAOF1 | C6orf193 | LSD2 | bA204B7.3 | dJ298J15.2lysine demethylase 1B6p22.3CV:GWASdb
CV:PGCnp
GSMA_I
Chromatin Remodeling Genes
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9994CASP8AP2CED-4 | FLASH | RIP25caspase 8 associated protein 26q15CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3066HDAC2HD2 | RPD3 | YAF1histone deacetylase 26q21DMG:Wockner_2014
Network
PMID:cooccur
Chromatin Remodeling Genes
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
387103CENPWC6orf173 | CENP-W | CUG2centromere protein W6q22.32CV:PGCnp
DMG:Jaffe_2016
9589WTAPMum2Wilms tumor 1 associated protein6q25-q27CV:PGCnp
26271FBXO5EMI1 | FBX5 | Fbxo31F-box protein 56q25.2CV:GWASdb
CV:PGCnp
39ACAT2-acetyl-CoA acetyltransferase 26q25.3CV:PGCnp
PMID:cooccur
6950TCP1CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alphat-complex 16q25.3-q26Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1956EGFRERBB | ERBB1 | HER1 | NISBD2 | PIG61 | mENAepidermal growth factor receptor7p12Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
63979FIGNL1-fidgetin like 17p12.1CV:PGCnp
DMG:Wockner_2014
5425POLD2-polymerase (DNA) delta 2, accessory subunit7p13CV:PGCnp
DMG:Wockner_2014
358AQP1AQP-CHIP | CHIP28 | COaquaporin 1 (Colton blood group)7p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
84433CARD11BENTA | BIMP3 | CARMA1 | IMD11 | PPBLcaspase recruitment domain family member 117p22CV:PGCnp
GO_Annotation
5982RFC2RFC40replication factor C subunit 27q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
1577CYP3A5CP35 | CYPIIIA5 | P450PCN3 | PCN3cytochrome P450 family 3 subfamily A member 57q21.1ADT:Sun_2012
CV:PGCnp
PMID:cooccur
64816CYP3A43-cytochrome P450 family 3 subfamily A member 437q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
2050EPHB4HTK | MYK1 | TYRO11EPH receptor B47q22CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
7205TRIP6OIP-1 | OIP1 | TRIP-6 | TRIP6i2 | ZRP-1thyroid hormone receptor interactor 67q22CV:PGCnp
Network
1738DLDDLDD | DLDH | E3 | GCSL | LAD | PHE3dihydrolipoamide dehydrogenase7q31-q32CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6561SLC13A1NAS1 | NaSi-1solute carrier family 13 member 17q31.32CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
CompositeSet
231AKR1B1ADR | ALDR1 | ALR2 | ARaldo-keto reductase family 1, member B1 (aldose reductase)7q35CV:PGCnp
DMG:Jaffe_2016
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
55124PIWIL2CT80 | HILI | PIWIL1L | milipiwi-like RNA-mediated gene silencing 28p21.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
51201ZDHHC2DHHC2 | ZNF372zinc finger DHHC-type containing 28p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
29883CNOT7CAF1 | Caf1a | hCAF-1CCR4-NOT transcription complex subunit 78p22-p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
9821RB1CC1ATG17 | CC1 | FIP200 | PPP1R131RB1 inducible coiled-coil 18q11CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
9760TOXTOX1thymocyte selection associated high mobility group box8q12.1CV:GWASdb
CV:PGCnp
PMID:cooccur
23212RRS1-ribosome biogenesis regulator homolog8q13.1CV:PGCnp
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
3646EIF3EEIF3-P48 | EIF3S6 | INT6 | eIF3-p46eukaryotic translation initiation factor 3 subunit E8q22-q23CV:PGCnp
DMG:Jaffe_2016
Network
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
26986PABPC1PAB1 | PABP | PABP1 | PABPC2 | PABPL1poly(A) binding protein, cytoplasmic 18q22.2-q23CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7534YWHAZ14-3-3-zeta | HEL-S-3 | HEL-S-93 | HEL4 | KCIP-1 | YWHADtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta8q23.1Association
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
1936EEF1DEF-1D | EF1D | FP1047eukaryotic translation elongation factor 1 delta8q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
CompositeSet
3297HSF1HSTF1heat shock transcription factor 18q24.3CV:PGCnp
PMID:cooccur
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
54801HAUS6Dgt6 | FAM29AHAUS augmin like complex subunit 69p22.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
4920ROR2BDB | BDB1 | NTRKR2receptor tyrosine kinase-like orphan receptor 29q22CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
2203FBP1FBPfructose-bisphosphatase 19q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
27130INVSINV | NPH2 | NPHP2inversin9q31CV:PGCnp
DMG:Jaffe_2016
8518IKBKAPDYS | ELP1 | FD | IKAP | IKI3 | TOT1inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein9q31CV:GWASdb
CV:PGCnp
Network
Ascano FMRP targets
9128PRPF4HPRP4 | HPRP4P | PRP4 | Prp4p | RP70 | SNRNP60pre-mRNA processing factor 49q31-q33CV:PGCnp
Network
Ascano FMRP targets
6136RPL12L12ribosomal protein L129q34CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4851NOTCH1AOS5 | AOVD1 | TAN1 | hN1notch 19q34.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
1756DMDBMD | CMD3B | DXS142 | DXS164 | DXS206 | DXS230 | DXS239 | DXS268 | DXS269 | DXS270 | DXS272 | MRX85dystrophinXp21.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
84061MAGT1IAP | MRX95 | OST3B | PRO0756 | XMEN | bA217H1.1magnesium transporter 1Xq21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
203547VMA21MEAX | XMEAVMA21 vacuolar H+-ATPase homolog (S. cerevisiae)Xq28CV:GWASdb
CV:PGCnp